Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:45:48 (18865): wrapper (7.7.26015): starting
02:45:48 (18865): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 02:45:48] Arguments: --nthreads 8
[2025-04-19 02:45:48] Threads: 8
[2025-04-19 02:45:48] Checking for CVMFS
[2025-04-19 02:45:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 02:45:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 02:45:49] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 02:45:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 02:45:49] 2.11.2.0 26290 39377 227372 145029 2 474 15572349 18432001 23843 130560 0 257040174 98.776 652318572 58356 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 02:45:49] CVMFS is ok
[2025-04-19 02:45:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 02:45:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 02:45:49] Further information can be found at the LHC@home message board.
[2025-04-19 02:45:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 02:45:49] Checking for apptainer binary...
[2025-04-19 02:45:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 02:45:49] Running /usr/bin/apptainer --version
[2025-04-19 02:45:49] apptainer version 1.3.2-1.el7
[2025-04-19 02:45:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 02:45:51] c-212-2.aglt2.org
[2025-04-19 02:45:51] apptainer works
[2025-04-19 02:45:51] Set ATHENA_PROC_NUMBER=8
[2025-04-19 02:45:51] Set ATHENA_CORE_NUMBER=8
[2025-04-19 02:45:51] Starting ATLAS job with PandaID=6607297649
[2025-04-19 02:45:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:00:05 (18865): BOINC client no longer exists - exiting
05:00:05 (18865): timer handler: client dead, exiting
05:13:53 (73434): wrapper (7.7.26015): starting
05:13:53 (73434): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 05:13:54] Arguments: --nthreads 8
[2025-04-19 05:13:54] Threads: 8
[2025-04-19 05:13:54] This job has been restarted, cleaning up previous attempt
[2025-04-19 05:13:54] Checking for CVMFS
[2025-04-19 05:13:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 05:13:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 05:13:54] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 05:13:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 05:13:55] 2.11.2.0 26290 39525 213368 145032 2 64 12360017 18432000 18810 130560 0 257642016 98.775 654004285 58349 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 05:13:55] CVMFS is ok
[2025-04-19 05:13:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 05:13:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 05:13:55] Further information can be found at the LHC@home message board.
[2025-04-19 05:13:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 05:13:55] Checking for apptainer binary...
[2025-04-19 05:13:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 05:13:55] Running /usr/bin/apptainer --version
[2025-04-19 05:13:55] apptainer version 1.3.2-1.el7
[2025-04-19 05:13:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 05:14:00] c-212-2.aglt2.org
[2025-04-19 05:14:00] apptainer works
[2025-04-19 05:14:00] Set ATHENA_PROC_NUMBER=8
[2025-04-19 05:14:00] Set ATHENA_CORE_NUMBER=8
[2025-04-19 05:14:00] Starting ATLAS job with PandaID=6607297649
[2025-04-19 05:14:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:00:05 (73434): BOINC client no longer exists - exiting
06:00:05 (73434): timer handler: client dead, exiting
06:11:38 (70878): wrapper (7.7.26015): starting
06:11:38 (70878): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 06:11:38] Arguments: --nthreads 8
[2025-04-19 06:11:38] Threads: 8
[2025-04-19 06:11:38] This job has been restarted, cleaning up previous attempt
[2025-04-19 06:11:38] Checking for CVMFS
[2025-04-19 06:11:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 06:11:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 06:11:39] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 06:11:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 06:11:39] 2.11.2.0 26290 39583 227764 145034 0 105 12452977 18432001 20754 130560 0 258255093 98.771 656885406 58328 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 06:11:39] CVMFS is ok
[2025-04-19 06:11:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 06:11:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 06:11:39] Further information can be found at the LHC@home message board.
[2025-04-19 06:11:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 06:11:39] Checking for apptainer binary...
[2025-04-19 06:11:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 06:11:39] Running /usr/bin/apptainer --version
[2025-04-19 06:11:39] apptainer version 1.3.2-1.el7
[2025-04-19 06:11:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 06:11:43] c-212-2.aglt2.org
[2025-04-19 06:11:43] apptainer works
[2025-04-19 06:11:43] Set ATHENA_PROC_NUMBER=8
[2025-04-19 06:11:43] Set ATHENA_CORE_NUMBER=8
[2025-04-19 06:11:43] Starting ATLAS job with PandaID=6607297649
[2025-04-19 06:11:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 09:55:19]  *** The last 200 lines of the pilot log: ***
[2025-04-19 09:55:19] 2025-04-19 13:54:56,682 | INFO     | chi2: 6.680411302500137
[2025-04-19 09:55:19] 2025-04-19 13:54:56,682 | INFO     | sum of square deviations: 2996468366.206583
[2025-04-19 09:55:19] 2025-04-19 13:54:56,684 | INFO     | sum of deviations: 134479571301.67146
[2025-04-19 09:55:19] 2025-04-19 13:54:56,684 | INFO     | mean x: 1745064036.0610328
[2025-04-19 09:55:19] 2025-04-19 13:54:56,684 | INFO     | mean y: 2390607.9483568077
[2025-04-19 09:55:19] 2025-04-19 13:54:56,684 | INFO     | -- intersect: -78314959947.14613
[2025-04-19 09:55:19] 2025-04-19 13:54:56,684 | INFO     | intersect: -78314959947.14613
[2025-04-19 09:55:19] 2025-04-19 13:54:56,684 | INFO     | chi2: 5.893053837861867
[2025-04-19 09:55:19] 2025-04-19 13:54:56,684 | INFO     | current chi2=5.893053837861867 (change=11.786062698618608 %)
[2025-04-19 09:55:19] 2025-04-19 13:54:56,684 | INFO     | right removable region: 212
[2025-04-19 09:55:19] 2025-04-19 13:54:56,705 | INFO     | sum of square deviations: 2996460436.206583
[2025-04-19 09:55:19] 2025-04-19 13:54:56,706 | INFO     | sum of deviations: 63205350480.380264
[2025-04-19 09:55:19] 2025-04-19 13:54:56,706 | INFO     | mean x: 1745064341.0610328
[2025-04-19 09:55:19] 2025-04-19 13:54:56,706 | INFO     | mean y: 2424657.8169014086
[2025-04-19 09:55:19] 2025-04-19 13:54:56,706 | INFO     | -- intersect: -36806805978.04932
[2025-04-19 09:55:19] 2025-04-19 13:54:56,706 | INFO     | intersect: -36806805978.04932
[2025-04-19 09:55:19] 2025-04-19 13:54:56,706 | INFO     | chi2: 3.491949142095289
[2025-04-19 09:55:19] 2025-04-19 13:54:56,706 | INFO     | current chi2=3.491949142095289 (change=47.728530715040996 %)
[2025-04-19 09:55:19] 2025-04-19 13:54:56,707 | INFO     | sum of square deviations: 2790350281.1875
[2025-04-19 09:55:19] 2025-04-19 13:54:56,707 | INFO     | sum of deviations: 16312153492.124994
[2025-04-19 09:55:19] 2025-04-19 13:54:56,708 | INFO     | mean x: 1745064493.5625
[2025-04-19 09:55:19] 2025-04-19 13:54:56,708 | INFO     | mean y: 2459358.528846154
[2025-04-19 09:55:19] 2025-04-19 13:54:56,708 | INFO     | -- intersect: -10199041171.5532
[2025-04-19 09:55:19] 2025-04-19 13:54:56,708 | INFO     | intersect: -10199041171.5532
[2025-04-19 09:55:19] 2025-04-19 13:54:56,708 | INFO     | chi2: 1.6684725479968954
[2025-04-19 09:55:19] 2025-04-19 13:54:56,708 | INFO     | current chi2=1.6684725479968954 (change=52.21944879197883 %)
[2025-04-19 09:55:19] 2025-04-19 13:54:56,708 | INFO     | sum of square deviations: 2593914726.167488
[2025-04-19 09:55:19] 2025-04-19 13:54:56,717 | INFO     | sum of deviations: -11091889276.339901
[2025-04-19 09:55:19] 2025-04-19 13:54:56,717 | INFO     | mean x: 1745064646.0640395
[2025-04-19 09:55:19] 2025-04-19 13:54:56,717 | INFO     | mean y: 2480477.487684729
[2025-04-19 09:55:19] 2025-04-19 13:54:56,717 | INFO     | -- intersect: 7464585395.175634
[2025-04-19 09:55:19] 2025-04-19 13:54:56,717 | INFO     | intersect: 7464585395.175634
[2025-04-19 09:55:19] 2025-04-19 13:54:56,717 | INFO     | chi2: 0.8426907393499927
[2025-04-19 09:55:19] 2025-04-19 13:54:56,717 | INFO     | current chi2=0.8426907393499927 (change=49.493281123402646 %)
[2025-04-19 09:55:19] 2025-04-19 13:54:56,718 | INFO     | sum of square deviations: 2406921208.6464715
[2025-04-19 09:55:19] 2025-04-19 13:54:56,719 | INFO     | sum of deviations: -12731401914.21212
[2025-04-19 09:55:19] 2025-04-19 13:54:56,719 | INFO     | mean x: 1745064798.5656567
[2025-04-19 09:55:19] 2025-04-19 13:54:56,719 | INFO     | mean y: 2481809.4393939395
[2025-04-19 09:55:19] 2025-04-19 13:54:56,719 | INFO     | -- intersect: 9232996392.58055
[2025-04-19 09:55:19] 2025-04-19 13:54:56,719 | INFO     | intersect: 9232996392.58055
[2025-04-19 09:55:19] 2025-04-19 13:54:56,741 | INFO     | chi2: 0.839747731196192
[2025-04-19 09:55:19] 2025-04-19 13:54:56,742 | INFO     | current chi2=0.839747731196192 (change=0.34923940852498936 %)
[2025-04-19 09:55:19] 2025-04-19 13:54:56,742 | INFO     | left removable region: 40
[2025-04-19 09:55:19] 2025-04-19 13:54:56,742 | INFO     | sum of square deviations: 1577783618.1627982
[2025-04-19 09:55:19] 2025-04-19 13:54:56,743 | INFO     | sum of deviations: 666580404.8255813
[2025-04-19 09:55:19] 2025-04-19 13:54:56,743 | INFO     | mean x: 1745065225.5697675
[2025-04-19 09:55:19] 2025-04-19 13:54:56,743 | INFO     | mean y: 2493260.8895348837
[2025-04-19 09:55:19] 2025-04-19 13:54:56,743 | INFO     | -- intersect: -734760105.8692247
[2025-04-19 09:55:19] 2025-04-19 13:54:56,743 | INFO     | intersect: -734760105.8692247
[2025-04-19 09:55:19] 2025-04-19 13:54:56,743 | INFO     | chi2: 0.00016042228157696947
[2025-04-19 09:55:19] 2025-04-19 13:54:56,744 | INFO     | -- intersect: -734760105.8692247
[2025-04-19 09:55:19] 2025-04-19 13:54:56,744 | INFO     | current memory leak: 0.42 B/s (using 172 data points, chi2=0.00)
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | ..............................
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | . Timing measurements:
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | . get job = 0 s
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | . initial setup = 2 s
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | . payload setup = 11 s
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | . stage-in = 0 s
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | . payload execution = 13292 s
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | . stage-out = 4 s
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | . log creation = 0 s
[2025-04-19 09:55:19] 2025-04-19 13:54:56,745 | INFO     | ..............................
[2025-04-19 09:55:19] 2025-04-19 13:54:56,909 | INFO     | 
[2025-04-19 09:55:19] 2025-04-19 13:54:56,909 | INFO     | job summary report
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | --------------------------------------------------
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | PanDA job id: 6607297649
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | task id: 44075483
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | errors: (none)
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | pilot state: finished 
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | transexitcode: 0
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | exeerrorcode: 0
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | exeerrordiag: 
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | exitcode: 0
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | exitmsg: OK
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | cpuconsumptiontime: 35316 s
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | nevents: 400
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | neventsw: 0
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | pid: 35031
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | pgrp: 35031
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | corecount: 8
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | event service: False
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | sizes: {0: 2426821, 7: 2427027, 11: 2427055, 13307: 2456993, 13308: 2456992, 13313: 2465989, 13314: 2466201, 13357: 2466371}
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | --------------------------------------------------
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | 
[2025-04-19 09:55:19] 2025-04-19 13:54:56,910 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-19 09:55:19] 2025-04-19 13:54:56,971 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,972 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,972 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 09:55:19] 2025-04-19 13:54:56,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 09:55:19] 2025-04-19 13:54:56,976 | INFO     | job 6607297649 has completed (purged errors)
[2025-04-19 09:55:19] 2025-04-19 13:54:56,977 | INFO     | overall cleanup function is called
[2025-04-19 09:55:19] 2025-04-19 13:54:57,985 | INFO     | --- collectZombieJob: --- 10, [35031]
[2025-04-19 09:55:19] 2025-04-19 13:54:57,986 | INFO     | zombie collector waiting for pid 35031
[2025-04-19 09:55:19] 2025-04-19 13:54:57,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 09:55:19] 2025-04-19 13:54:57,986 | INFO     | collected zombie processes
[2025-04-19 09:55:19] 2025-04-19 13:54:57,986 | INFO     | will attempt to kill all subprocesses of pid=35031
[2025-04-19 09:55:19] 2025-04-19 13:54:59,149 | INFO     | process IDs to be killed: [35031] (in reverse order)
[2025-04-19 09:55:19] 2025-04-19 13:54:59,904 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 09:55:19] 2025-04-19 13:54:59,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 09:55:19] 2025-04-19 13:54:59,939 | INFO     | did not find any defunct processes belonging to 35031
[2025-04-19 09:55:19] 2025-04-19 13:55:00,006 | INFO     | did not find any defunct processes belonging to 35031
[2025-04-19 09:55:19] 2025-04-19 13:55:00,007 | INFO     | ready for new job
[2025-04-19 09:55:19] 2025-04-19 13:55:00,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 09:55:19] 2025-04-19 13:55:00,008 | INFO     | **************************************
[2025-04-19 09:55:19] 2025-04-19 13:55:00,008 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 09:55:19] 2025-04-19 13:55:00,008 | INFO     | **************************************
[2025-04-19 09:55:19] 2025-04-19 13:55:00,008 | INFO     | 
[2025-04-19 09:55:19] 2025-04-19 13:55:00,085 | INFO     | architecture information:
[2025-04-19 09:55:19] 2025-04-19 13:55:00,090 | INFO     | executing command: cat /etc/os-release
[2025-04-19 09:55:19] 2025-04-19 13:55:00,219 | INFO     | cat /etc/os-release:
[2025-04-19 09:55:19] NAME="CentOS Linux"
[2025-04-19 09:55:19] VERSION="7 (Core)"
[2025-04-19 09:55:19] ID="centos"
[2025-04-19 09:55:19] ID_LIKE="rhel fedora"
[2025-04-19 09:55:19] VERSION_ID="7"
[2025-04-19 09:55:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 09:55:19] ANSI_COLOR="0;31"
[2025-04-19 09:55:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 09:55:19] HOME_URL="https://www.centos.org/"
[2025-04-19 09:55:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 09:55:19] 
[2025-04-19 09:55:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 09:55:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 09:55:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 09:55:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 09:55:19] 
[2025-04-19 09:55:19] 2025-04-19 13:55:00,219 | INFO     | **************************************
[2025-04-19 09:55:19] 2025-04-19 13:55:00,282 | INFO     | PID=93292 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 09:55:19] 2025-04-19 13:55:00,282 | INFO     | .. there are 26 such processes running
[2025-04-19 09:55:19] 2025-04-19 13:55:00,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-19 09:55:19] 2025-04-19 13:55:00,858 | INFO     | sufficient remaining disk space (102979600384 B)
[2025-04-19 09:55:19] 2025-04-19 13:55:00,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 09:55:19] 2025-04-19 13:55:00,859 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 09:55:19] 2025-04-19 13:55:00,859 | INFO     | update_server=False
[2025-04-19 09:55:19] 2025-04-19 13:55:00,859 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 09:55:19] 2025-04-19 13:55:00,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 09:55:19] 2025-04-19 13:55:00,860 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 09:55:19] 2025-04-19 13:55:00,860 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 09:55:19] 2025-04-19 13:55:00,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 09:55:19] 2025-04-19 13:55:00,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 09:55:19] 2025-04-19 13:55:00,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 09:55:19] 2025-04-19 13:55:00,908 | INFO     | all payload control threads have been joined
[2025-04-19 09:55:19] 2025-04-19 13:55:01,296 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 09:55:19] 2025-04-19 13:55:01,301 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 09:55:19] 2025-04-19 13:55:01,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:55:19] 2025-04-19 13:55:01,302 | INFO     | will abort loop
[2025-04-19 09:55:19] 2025-04-19 13:55:01,405 | INFO     | all data control threads have been joined
[2025-04-19 09:55:19] 2025-04-19 13:55:01,865 | INFO     | [job] retrieve thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:01,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:55:19] 2025-04-19 13:55:01,914 | INFO     | [payload] control thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:01,935 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:01,953 | INFO     | [job] validate thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:01,960 | INFO     | [data] copytool_in thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:02,320 | INFO     | [job] job monitor thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:02,361 | INFO     | all job control threads have been joined
[2025-04-19 09:55:19] 2025-04-19 13:55:02,411 | INFO     | [data] control thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:02,418 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:02,428 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:02,866 | INFO     | [data] copytool_out thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:02,872 | INFO     | [payload] failed_post thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:02,885 | INFO     | [job] queue monitor thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:03,252 | INFO     | [payload] validate_post thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:03,368 | INFO     | [job] control thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:04,896 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:11,599 | INFO     | job.realtimelogging is not enabled
[2025-04-19 09:55:19] 2025-04-19 13:55:12,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 09:55:19] 2025-04-19 13:55:12,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013568554816)>', '<ExcThread(monitor, started 140012762945280)>']
[2025-04-19 09:55:19] 2025-04-19 13:55:12,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 09:55:19] 2025-04-19 13:55:12,931 | INFO     | [monitor] control thread has ended
[2025-04-19 09:55:19] 2025-04-19 13:55:17,941 | INFO     | all workflow threads have been joined
[2025-04-19 09:55:19] 2025-04-19 13:55:17,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 09:55:19] 2025-04-19 13:55:17,942 | INFO     | traces error code: 0
[2025-04-19 09:55:19] 2025-04-19 13:55:17,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 09:55:19] 2025-04-19 13:55:18,301 [wrapper] ==== pilot stdout END ====
[2025-04-19 09:55:19] 2025-04-19 13:55:18,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 09:55:19] 2025-04-19 13:55:18,400 [wrapper] pilotpid: 93292
[2025-04-19 09:55:19] 2025-04-19 13:55:18,440 [wrapper] Pilot exit status: 0
[2025-04-19 09:55:19] 2025-04-19 13:55:18,717 [wrapper] pandaids: 6607297649 6607297649 6607297649
[2025-04-19 09:55:19] 2025-04-19 13:55:18,815 [wrapper] cleanup supervisor_pilot 95910 93293
[2025-04-19 09:55:19] 2025-04-19 13:55:18,820 [wrapper] Test setup, not cleaning
[2025-04-19 09:55:19] 2025-04-19 13:55:18,824 [wrapper] apfmon messages muted
[2025-04-19 09:55:19] 2025-04-19 13:55:18,851 [wrapper] ==== wrapper stdout END ====
[2025-04-19 09:55:19] 2025-04-19 13:55:18,891 [wrapper] ==== wrapper stderr END ====
[2025-04-19 09:55:19]  *** Error codes and diagnostics ***
[2025-04-19 09:55:19]     "exeErrorCode": 0,
[2025-04-19 09:55:19]     "exeErrorDiag": "",
[2025-04-19 09:55:19]     "pilotErrorCode": 0,
[2025-04-19 09:55:19]     "pilotErrorDiag": "",
[2025-04-19 09:55:19]  *** Listing of results directory ***
[2025-04-19 09:55:19] total 629512
[2025-04-19 09:55:19] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 23:35 pilot3.tar.gz
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 23:47 queuedata.json
[2025-04-19 09:55:19] -rwx------ 1 boincer umatlas     37140 Apr 18 23:48 runpilot2-wrapper.sh
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas       100 Apr 19 02:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 09:55:19] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 02:45 run_atlas
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas       105 Apr 19 02:45 job.xml
[2025-04-19 09:55:19] drwxrwx--x 2 boincer umatlas      4096 Apr 19 02:45 shared
[2025-04-19 09:55:19] -rw-r--r-- 2 boincer umatlas    508888 Apr 19 02:45 input.tar.gz
[2025-04-19 09:55:19] -rw-r--r-- 3 boincer umatlas 222562951 Apr 19 02:45 EVNT.44075481._002999.pool.root.1
[2025-04-19 09:55:19] -rw-r--r-- 3 boincer umatlas 222562951 Apr 19 02:45 ATLAS.root_0
[2025-04-19 09:55:19] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 02:45 start_atlas.sh
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas         0 Apr 19 02:45 boinc_lockfile
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas      2577 Apr 19 06:11 pandaJob.out
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas       467 Apr 19 06:11 setup.sh.local
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas    991300 Apr 19 06:11 agis_schedconf.cvmfs.json
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas 192564406 Apr 19 09:53 HITS.44075483._077283.pool.root.1
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas       531 Apr 19 09:53 boinc_task_state.xml
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas      1094 Apr 19 09:54 memory_monitor_summary.json
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas   1618536 Apr 19 09:54 agis_ddmendpoints.agis.ALL.json
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas    377620 Apr 19 09:54 log.44075483._077283.job.log.tgz.1
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas      6388 Apr 19 09:54 init_data.xml
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas      7758 Apr 19 09:54 heartbeat.json
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas        96 Apr 19 09:55 pilot_heartbeat.json
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas      5128 Apr 19 09:55 pilotlog.txt
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 09:55 boinc_mmap_file
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas   1154343 Apr 19 09:55 log.44075483._077283.job.log.1
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas        28 Apr 19 09:55 wrapper_checkpoint.txt
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas       357 Apr 19 09:55 output.list
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas       620 Apr 19 09:55 runtime_log
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas   1546240 Apr 19 09:55 result.tar.gz
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas       912 Apr 19 09:55 yZkKDmsMEQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmotgLDmVHCicm.diag
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas     11499 Apr 19 09:55 runtime_log.err
[2025-04-19 09:55:19] -rw-r--r-- 1 boincer umatlas     25558 Apr 19 09:55 stderr.txt
[2025-04-19 09:55:19] HITS file was successfully produced:
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas 192564406 Apr 19 09:53 shared/HITS.pool.root.1
[2025-04-19 09:55:19]  *** Contents of shared directory: ***
[2025-04-19 09:55:19] total 407436
[2025-04-19 09:55:19] -rw-r--r-- 2 boincer umatlas    508888 Apr 19 02:45 input.tar.gz
[2025-04-19 09:55:19] -rw-r--r-- 3 boincer umatlas 222562951 Apr 19 02:45 ATLAS.root_0
[2025-04-19 09:55:19] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 02:45 start_atlas.sh
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas 192564406 Apr 19 09:53 HITS.pool.root.1
[2025-04-19 09:55:19] -rw------- 1 boincer umatlas   1546240 Apr 19 09:55 result.tar.gz
09:55:21 (70878): run_atlas exited; CPU time 34895.396493
09:55:21 (70878): called boinc_finish(0)

</stderr_txt>
]]>

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