Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:19:26 (17887): wrapper (7.7.26015): starting
17:19:26 (17887): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 17:19:26] Arguments: --nthreads 3
[2025-04-19 17:19:26] Threads: 3
[2025-04-19 17:19:26] Checking for CVMFS
[2025-04-19 17:19:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 17:19:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 17:19:26] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 17:19:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 17:19:27] 2.9.2.0 4039155 551 66288 145041 1 56 20360688 36864000 0 130560 0 446719 99.993 224133 11094 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 17:19:27] CVMFS is ok
[2025-04-19 17:19:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 17:19:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 17:19:27] Further information can be found at the LHC@home message board.
[2025-04-19 17:19:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 17:19:27] Checking for apptainer binary...
[2025-04-19 17:19:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 17:19:27] Running /usr/bin/apptainer --version
[2025-04-19 17:19:27] apptainer version 1.3.6-6.1
[2025-04-19 17:19:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 17:19:27] itA179
[2025-04-19 17:19:27] apptainer works
[2025-04-19 17:19:27] Set ATHENA_PROC_NUMBER=3
[2025-04-19 17:19:27] Set ATHENA_CORE_NUMBER=3
[2025-04-19 17:19:27] Starting ATLAS job with PandaID=6607297637
[2025-04-19 17:19:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 18:48:18]  *** The last 200 lines of the pilot log: ***
[2025-04-19 18:48:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 18:48:18]  is_altstaged=None
[2025-04-19 18:48:18]  is_tar=False
[2025-04-19 18:48:18]  lfn=log.44075483._077271.job.log.tgz.1
[2025-04-19 18:48:18]  mtime=0
[2025-04-19 18:48:18]  protocol_id=None
[2025-04-19 18:48:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 18:48:18]  replicas=None
[2025-04-19 18:48:18]  scope=mc23_13p6TeV
[2025-04-19 18:48:18]  status=None
[2025-04-19 18:48:18]  status_code=0
[2025-04-19 18:48:18]  storage_token=
[2025-04-19 18:48:18]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6607297637/log.44075483._077271.job.log.tgz.1
[2025-04-19 18:48:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/e4/log.44075483._077271.job.log.tgz.1
[2025-04-19 18:48:18]  workdir=None
[2025-04-19 18:48:18] ]
[2025-04-19 18:48:18] 2025-04-19 16:47:52,663 | INFO     | transferring file log.44075483._077271.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6607297637/log.44075483._077271.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 18:48:18] 2025-04-19 16:47:52,663 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6607297637/log.44075483._077271.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0772
[2025-04-19 18:48:18] 2025-04-19 16:47:52,676 | INFO     | adding to output.list: log.44075483._077271.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/e4/log.44075483._077271.job.log.tg
[2025-04-19 18:48:18] 2025-04-19 16:47:52,676 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 18:48:18] 2025-04-19 16:47:52,676 | INFO     | summary of transferred files:
[2025-04-19 18:48:18] 2025-04-19 16:47:52,676 | INFO     |  -- lfn=log.44075483._077271.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 18:48:18] 2025-04-19 16:47:52,676 | INFO     | stage-out finished correctly
[2025-04-19 18:48:18] 2025-04-19 16:47:54,042 | INFO     | monitor loop #407: job 0:6607297637 is in state 'finished'
[2025-04-19 18:48:18] 2025-04-19 16:47:54,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:48:18] 2025-04-19 16:47:54,243 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 18:48:18] 2025-04-19 16:47:54,276 | INFO     | job 6607297637 has state=finished
[2025-04-19 18:48:18] 2025-04-19 16:47:54,276 | INFO     | preparing for final server update for job 6607297637 in state='finished'
[2025-04-19 18:48:18] 2025-04-19 16:47:54,276 | INFO     | this job has now completed (state=finished)
[2025-04-19 18:48:18] 2025-04-19 16:47:54,276 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 18:48:18] 2025-04-19 16:47:54,276 | INFO     | log transfer has been attempted: DONE
[2025-04-19 18:48:18] 2025-04-19 16:47:54,276 | INFO     | job 6607297637 has finished - writing final server update
[2025-04-19 18:48:18] 2025-04-19 16:47:54,277 | INFO     | total number of processed events: 400 (read)
[2025-04-19 18:48:18] 2025-04-19 16:47:54,277 | INFO     | executing command: lscpu
[2025-04-19 18:48:18] 2025-04-19 16:47:54,291 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 18:48:18] 2025-04-19 16:47:56,544 | INFO     | monitor loop #408: job 0:6607297637 is in state 'finished'
[2025-04-19 18:48:18] 2025-04-19 16:47:56,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:48:18] 2025-04-19 16:47:57,403 | INFO     | PID=21534 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 18:48:18] 2025-04-19 16:47:57,587 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 18:48:18] 2025-04-19 16:47:57,587 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607297637/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 18:48:18] 2025-04-19 16:47:57,587 | INFO     | extracted standard info from prmon json
[2025-04-19 18:48:18] 2025-04-19 16:47:57,587 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 18:48:18] 2025-04-19 16:47:57,587 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 18:48:18] 2025-04-19 16:47:57,587 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 18:48:18] 2025-04-19 16:47:57,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 18:48:18] 2025-04-19 16:47:57,588 | INFO     | fitting pss+swap vs Time
[2025-04-19 18:48:18] 2025-04-19 16:47:57,588 | INFO     | sum of square deviations: 158737860.0
[2025-04-19 18:48:18] 2025-04-19 16:47:57,588 | INFO     | sum of deviations: 9309077202.999998
[2025-04-19 18:48:18] 2025-04-19 16:47:57,588 | INFO     | mean x: 1745078705.5
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | mean y: 2373377.925
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | -- intersect: -102336617426.22719
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | intersect: -102336617426.22719
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | chi2: 1.5058926963319732
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | -- intersect: -102336617426.22719
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | current memory leak: 58.64 B/s (using 80 data points, chi2=1.51)
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | ..............................
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | . Timing measurements:
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | . get job = 0 s
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | . initial setup = 1 s
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | . payload setup = 2 s
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | . stage-in = 0 s
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | . payload execution = 5281 s
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | . stage-out = 0 s
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | . log creation = 0 s
[2025-04-19 18:48:18] 2025-04-19 16:47:57,589 | INFO     | ..............................
[2025-04-19 18:48:18] 2025-04-19 16:47:58,029 | INFO     | 
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | job summary report
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | --------------------------------------------------
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | PanDA job id: 6607297637
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | task id: 44075483
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | errors: (none)
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | pilot state: finished 
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | transexitcode: 0
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | exeerrorcode: 0
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | exeerrordiag: 
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | exitcode: 0
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | exitmsg: OK
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | cpuconsumptiontime: 13976 s
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | nevents: 400
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | neventsw: 0
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | pid: 27961
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | pgrp: 27961
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | corecount: 3
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | event service: False
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | sizes: {0: 2426826, 2: 2427032, 10: 2427060, 5287: 2462530, 5288: 2462530, 5292: 2462700}
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | --------------------------------------------------
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | 
[2025-04-19 18:48:18] 2025-04-19 16:47:58,030 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | job 6607297637 has completed (purged errors)
[2025-04-19 18:48:18] 2025-04-19 16:47:58,046 | INFO     | overall cleanup function is called
[2025-04-19 18:48:18] 2025-04-19 16:47:58,404 | INFO     | 5307s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 18:48:18] 2025-04-19 16:47:59,048 | INFO     | --- collectZombieJob: --- 10, [27961]
[2025-04-19 18:48:18] 2025-04-19 16:47:59,048 | INFO     | zombie collector waiting for pid 27961
[2025-04-19 18:48:18] 2025-04-19 16:47:59,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 18:48:18] 2025-04-19 16:47:59,049 | INFO     | collected zombie processes
[2025-04-19 18:48:18] 2025-04-19 16:47:59,049 | INFO     | will attempt to kill all subprocesses of pid=27961
[2025-04-19 18:48:18] 2025-04-19 16:47:59,088 | INFO     | process IDs to be killed: [27961] (in reverse order)
[2025-04-19 18:48:18] 2025-04-19 16:47:59,111 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 18:48:18] 2025-04-19 16:47:59,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 18:48:18] 2025-04-19 16:47:59,112 | INFO     | did not find any defunct processes belonging to 27961
[2025-04-19 18:48:18] 2025-04-19 16:47:59,113 | INFO     | did not find any defunct processes belonging to 27961
[2025-04-19 18:48:18] 2025-04-19 16:47:59,113 | INFO     | ready for new job
[2025-04-19 18:48:18] 2025-04-19 16:47:59,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 18:48:18] 2025-04-19 16:47:59,114 | INFO     | **************************************
[2025-04-19 18:48:18] 2025-04-19 16:47:59,114 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 18:48:18] 2025-04-19 16:47:59,114 | INFO     | **************************************
[2025-04-19 18:48:18] 2025-04-19 16:47:59,114 | INFO     | 
[2025-04-19 18:48:18] 2025-04-19 16:47:59,114 | INFO     | architecture information:
[2025-04-19 18:48:18] 2025-04-19 16:47:59,114 | INFO     | executing command: cat /etc/os-release
[2025-04-19 18:48:18] 2025-04-19 16:47:59,123 | INFO     | cat /etc/os-release:
[2025-04-19 18:48:18] NAME="CentOS Linux"
[2025-04-19 18:48:18] VERSION="7 (Core)"
[2025-04-19 18:48:18] ID="centos"
[2025-04-19 18:48:18] ID_LIKE="rhel fedora"
[2025-04-19 18:48:18] VERSION_ID="7"
[2025-04-19 18:48:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 18:48:18] ANSI_COLOR="0;31"
[2025-04-19 18:48:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 18:48:18] HOME_URL="https://www.centos.org/"
[2025-04-19 18:48:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 18:48:18] 
[2025-04-19 18:48:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 18:48:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 18:48:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 18:48:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 18:48:18] 
[2025-04-19 18:48:18] 2025-04-19 16:47:59,123 | INFO     | **************************************
[2025-04-19 18:48:18] 2025-04-19 16:47:59,627 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 18:48:18] 2025-04-19 16:47:59,638 | INFO     | sufficient remaining disk space (134618284032 B)
[2025-04-19 18:48:18] 2025-04-19 16:47:59,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 18:48:18] 2025-04-19 16:47:59,638 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 18:48:18] 2025-04-19 16:47:59,638 | INFO     | update_server=False
[2025-04-19 18:48:18] 2025-04-19 16:47:59,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 18:48:18] 2025-04-19 16:47:59,639 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 18:48:18] 2025-04-19 16:47:59,639 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 18:48:18] 2025-04-19 16:47:59,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 18:48:18] 2025-04-19 16:47:59,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 18:48:18] 2025-04-19 16:47:59,795 | INFO     | all payload control threads have been joined
[2025-04-19 18:48:18] 2025-04-19 16:47:59,906 | INFO     | all data control threads have been joined
[2025-04-19 18:48:18] 2025-04-19 16:48:00,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:48:18] 2025-04-19 16:48:00,053 | INFO     | aborting loop
[2025-04-19 18:48:18] 2025-04-19 16:48:00,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 18:48:18] 2025-04-19 16:48:00,500 | INFO     | all job control threads have been joined
[2025-04-19 18:48:18] 2025-04-19 16:48:00,644 | INFO     | [job] retrieve thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:00,678 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:00,704 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:00,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 18:48:18] 2025-04-19 16:48:00,722 | INFO     | [payload] failed_post thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:00,801 | INFO     | [payload] control thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:00,880 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:00,912 | INFO     | [data] control thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:01,059 | INFO     | [job] job monitor thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:01,409 | INFO     | [payload] validate_post thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:01,506 | INFO     | [job] control thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:01,543 | INFO     | [data] copytool_in thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:02,127 | INFO     | [job] validate thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:02,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:48:18] 2025-04-19 16:48:02,726 | INFO     | [data] copytool_out thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:03,637 | INFO     | [job] queue monitor thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:04,289 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:10,407 | INFO     | job.realtimelogging is not enabled
[2025-04-19 18:48:18] 2025-04-19 16:48:11,412 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 18:48:18] 2025-04-19 16:48:13,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313172576064)>', '<ExcThread(monitor, started 140312529848064)>']
[2025-04-19 18:48:18] 2025-04-19 16:48:13,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 18:48:18] 2025-04-19 16:48:13,713 | INFO     | [monitor] control thread has ended
[2025-04-19 18:48:18] 2025-04-19 16:48:18,250 | INFO     | all workflow threads have been joined
[2025-04-19 18:48:18] 2025-04-19 16:48:18,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 18:48:18] 2025-04-19 16:48:18,251 | INFO     | traces error code: 0
[2025-04-19 18:48:18] 2025-04-19 16:48:18,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 18:48:18] 2025-04-19 16:48:18,302 [wrapper] ==== pilot stdout END ====
[2025-04-19 18:48:18] 2025-04-19 16:48:18,304 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 18:48:18] 2025-04-19 16:48:18,306 [wrapper] pilotpid: 21534
[2025-04-19 18:48:18] 2025-04-19 16:48:18,308 [wrapper] Pilot exit status: 0
[2025-04-19 18:48:18] 2025-04-19 16:48:18,315 [wrapper] pandaids: 6607297637
[2025-04-19 18:48:18] 2025-04-19 16:48:18,330 [wrapper] cleanup supervisor_pilot   39849 21535
[2025-04-19 18:48:18] 2025-04-19 16:48:18,332 [wrapper] Test setup, not cleaning
[2025-04-19 18:48:18] 2025-04-19 16:48:18,335 [wrapper] apfmon messages muted
[2025-04-19 18:48:18] 2025-04-19 16:48:18,337 [wrapper] ==== wrapper stdout END ====
[2025-04-19 18:48:18] 2025-04-19 16:48:18,339 [wrapper] ==== wrapper stderr END ====
[2025-04-19 18:48:18]  *** Error codes and diagnostics ***
[2025-04-19 18:48:18]     "exeErrorCode": 0,
[2025-04-19 18:48:18]     "exeErrorDiag": "",
[2025-04-19 18:48:18]     "pilotErrorCode": 0,
[2025-04-19 18:48:18]     "pilotErrorDiag": "",
[2025-04-19 18:48:18]  *** Listing of results directory ***
[2025-04-19 18:48:18] total 411448
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc    495897 Apr 19 05:35 pilot3.tar.gz
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc      5111 Apr 19 05:42 queuedata.json
[2025-04-19 18:48:18] -rwx------ 1 boinc boinc     37140 Apr 19 05:44 runpilot2-wrapper.sh
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc       100 Apr 19 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 18:48:18] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 17:19 run_atlas
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc       105 Apr 19 17:19 job.xml
[2025-04-19 18:48:18] -rw-r--r-- 2 boinc boinc 223804929 Apr 19 17:19 EVNT.44075481._002998.pool.root.1
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc      6923 Apr 19 17:19 init_data.xml
[2025-04-19 18:48:18] drwxrwx--x 2 boinc boinc      4096 Apr 19 17:19 shared
[2025-04-19 18:48:18] -rw-r--r-- 2 boinc boinc    508892 Apr 19 17:19 input.tar.gz
[2025-04-19 18:48:18] -rw-r--r-- 2 boinc boinc     17569 Apr 19 17:19 start_atlas.sh
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc         0 Apr 19 17:19 boinc_lockfile
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc      2578 Apr 19 17:19 pandaJob.out
[2025-04-19 18:48:18] -rw------- 1 boinc boinc       424 Apr 19 17:19 setup.sh.local
[2025-04-19 18:48:18] -rw------- 1 boinc boinc    991300 Apr 19 17:19 agis_schedconf.cvmfs.json
[2025-04-19 18:48:18] -rw------- 1 boinc boinc   1618536 Apr 19 17:19 agis_ddmendpoints.agis.ALL.json
[2025-04-19 18:48:18] drwx------ 4 boinc boinc      4096 Apr 19 17:19 pilot3
[2025-04-19 18:48:18] -rw------- 1 boinc boinc 192170608 Apr 19 18:47 HITS.44075483._077271.pool.root.1
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc       529 Apr 19 18:47 boinc_task_state.xml
[2025-04-19 18:48:18] -rw------- 1 boinc boinc      1023 Apr 19 18:47 memory_monitor_summary.json
[2025-04-19 18:48:18] -rw------- 1 boinc boinc    232863 Apr 19 18:47 log.44075483._077271.job.log.tgz.1
[2025-04-19 18:48:18] -rw------- 1 boinc boinc        95 Apr 19 18:47 pilot_heartbeat.json
[2025-04-19 18:48:18] -rw------- 1 boinc boinc      7664 Apr 19 18:47 heartbeat.json
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc      8192 Apr 19 18:48 boinc_mmap_file
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc        27 Apr 19 18:48 wrapper_checkpoint.txt
[2025-04-19 18:48:18] -rw------- 1 boinc boinc      4552 Apr 19 18:48 pilotlog.txt
[2025-04-19 18:48:18] -rw------- 1 boinc boinc    510545 Apr 19 18:48 log.44075483._077271.job.log.1
[2025-04-19 18:48:18] -rw------- 1 boinc boinc       357 Apr 19 18:48 output.list
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc       620 Apr 19 18:48 runtime_log
[2025-04-19 18:48:18] -rw------- 1 boinc boinc    757760 Apr 19 18:48 result.tar.gz
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc     11099 Apr 19 18:48 runtime_log.err
[2025-04-19 18:48:18] -rw------- 1 boinc boinc       658 Apr 19 18:48 DfmMDm5IEQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmTtgLDmB492Xm.diag
[2025-04-19 18:48:18] -rw-r--r-- 1 boinc boinc     21405 Apr 19 18:48 stderr.txt
[2025-04-19 18:48:18] HITS file was successfully produced:
[2025-04-19 18:48:18] -rw------- 1 boinc boinc 192170608 Apr 19 18:47 shared/HITS.pool.root.1
[2025-04-19 18:48:18]  *** Contents of shared directory: ***
[2025-04-19 18:48:18] total 407496
[2025-04-19 18:48:18] -rw-r--r-- 2 boinc boinc 223804929 Apr 19 17:19 ATLAS.root_0
[2025-04-19 18:48:18] -rw-r--r-- 2 boinc boinc    508892 Apr 19 17:19 input.tar.gz
[2025-04-19 18:48:18] -rw-r--r-- 2 boinc boinc     17569 Apr 19 17:19 start_atlas.sh
[2025-04-19 18:48:18] -rw------- 1 boinc boinc 192170608 Apr 19 18:47 HITS.pool.root.1
[2025-04-19 18:48:18] -rw------- 1 boinc boinc    757760 Apr 19 18:48 result.tar.gz
18:48:20 (17887): run_atlas exited; CPU time 13994.242974
18:48:20 (17887): called boinc_finish(0)

</stderr_txt>
]]>

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