Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:00:10 (1385951): wrapper (7.7.26015): starting
03:00:10 (1385951): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 03:00:11] Arguments: --nthreads 8
[2025-04-19 03:00:11] Threads: 8
[2025-04-19 03:00:11] Checking for CVMFS
[2025-04-19 03:00:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 03:00:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 03:00:11] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 03:00:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 03:00:12] 2.12.6.0 1049854 34853 219492 145029 0 594 20348412 32935937 23719 130560 0 98253264 99.620 109281564 21472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 03:00:12] CVMFS is ok
[2025-04-19 03:00:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 03:00:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 03:00:12] Further information can be found at the LHC@home message board.
[2025-04-19 03:00:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 03:00:12] Checking for apptainer binary...
[2025-04-19 03:00:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 03:00:12] Running /usr/bin/apptainer --version
[2025-04-19 03:00:13] apptainer version 1.4.0-1.el9
[2025-04-19 03:00:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 03:00:13] c6-12-29-1.aglt2.org
[2025-04-19 03:00:13] apptainer works
[2025-04-19 03:00:13] Set ATHENA_PROC_NUMBER=8
[2025-04-19 03:00:13] Set ATHENA_CORE_NUMBER=8
[2025-04-19 03:00:14] Starting ATLAS job with PandaID=6607297598
[2025-04-19 03:00:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 06:17:12]  *** The last 200 lines of the pilot log: ***
[2025-04-19 06:17:12] 2025-04-19 10:16:55,796 | INFO     | mean x: 1745051951.6578948
[2025-04-19 06:17:12] 2025-04-19 10:16:55,796 | INFO     | mean y: 2286263.389473684
[2025-04-19 06:17:12] 2025-04-19 10:16:55,796 | INFO     | -- intersect: -88125364461.0046
[2025-04-19 06:17:12] 2025-04-19 10:16:55,796 | INFO     | intersect: -88125364461.0046
[2025-04-19 06:17:12] 2025-04-19 10:16:55,796 | INFO     | chi2: 6.567881017121236
[2025-04-19 06:17:12] 2025-04-19 10:16:55,797 | INFO     | sum of square deviations: 1963357742.454049
[2025-04-19 06:17:12] 2025-04-19 10:16:55,802 | INFO     | sum of deviations: 117548765948.85397
[2025-04-19 06:17:12] 2025-04-19 10:16:55,802 | INFO     | mean x: 1745051799.1567566
[2025-04-19 06:17:12] 2025-04-19 10:16:55,802 | INFO     | mean y: 2295482.5567567567
[2025-04-19 06:17:12] 2025-04-19 10:16:55,802 | INFO     | -- intersect: -104476211450.8301
[2025-04-19 06:17:12] 2025-04-19 10:16:55,802 | INFO     | intersect: -104476211450.8301
[2025-04-19 06:17:12] 2025-04-19 10:16:55,803 | INFO     | chi2: 5.801544188713325
[2025-04-19 06:17:12] 2025-04-19 10:16:55,803 | INFO     | current chi2=5.801544188713325 (change=11.667946273847143 %)
[2025-04-19 06:17:12] 2025-04-19 10:16:55,803 | INFO     | right removable region: 184
[2025-04-19 06:17:12] 2025-04-19 10:16:55,803 | INFO     | sum of square deviations: 1963351033.135135
[2025-04-19 06:17:12] 2025-04-19 10:16:55,804 | INFO     | sum of deviations: 58546829838.918915
[2025-04-19 06:17:12] 2025-04-19 10:16:55,804 | INFO     | mean x: 1745052104.162162
[2025-04-19 06:17:12] 2025-04-19 10:16:55,804 | INFO     | mean y: 2331706.3027027026
[2025-04-19 06:17:12] 2025-04-19 10:16:55,805 | INFO     | -- intersect: -52034857200.91268
[2025-04-19 06:17:12] 2025-04-19 10:16:55,805 | INFO     | intersect: -52034857200.91268
[2025-04-19 06:17:12] 2025-04-19 10:16:55,805 | INFO     | chi2: 3.509062294242297
[2025-04-19 06:17:12] 2025-04-19 10:16:55,805 | INFO     | current chi2=3.509062294242297 (change=46.572383313661916 %)
[2025-04-19 06:17:12] 2025-04-19 10:16:55,809 | INFO     | sum of square deviations: 1808418048.0000024
[2025-04-19 06:17:12] 2025-04-19 10:16:55,811 | INFO     | sum of deviations: 22422977649.999996
[2025-04-19 06:17:12] 2025-04-19 10:16:55,811 | INFO     | mean x: 1745052256.6666667
[2025-04-19 06:17:12] 2025-04-19 10:16:55,811 | INFO     | mean y: 2367255.433333333
[2025-04-19 06:17:12] 2025-04-19 10:16:55,811 | INFO     | -- intersect: -21634923852.445873
[2025-04-19 06:17:12] 2025-04-19 10:16:55,811 | INFO     | intersect: -21634923852.445873
[2025-04-19 06:17:12] 2025-04-19 10:16:55,811 | INFO     | chi2: 1.9736705783553794
[2025-04-19 06:17:12] 2025-04-19 10:16:55,812 | INFO     | current chi2=1.9736705783553794 (change=43.75504300411546 %)
[2025-04-19 06:17:12] 2025-04-19 10:16:55,812 | INFO     | sum of square deviations: 1661868292.1942825
[2025-04-19 06:17:12] 2025-04-19 10:16:55,813 | INFO     | sum of deviations: -7105062765.068572
[2025-04-19 06:17:12] 2025-04-19 10:16:55,813 | INFO     | mean x: 1745052409.1657143
[2025-04-19 06:17:12] 2025-04-19 10:16:55,813 | INFO     | mean y: 2397888.588571429
[2025-04-19 06:17:12] 2025-04-19 10:16:55,813 | INFO     | -- intersect: 7463101575.9341135
[2025-04-19 06:17:12] 2025-04-19 10:16:55,817 | INFO     | intersect: 7463101575.9341135
[2025-04-19 06:17:12] 2025-04-19 10:16:55,818 | INFO     | chi2: 0.8790748738766893
[2025-04-19 06:17:12] 2025-04-19 10:16:55,818 | INFO     | current chi2=0.8790748738766893 (change=55.45989875325572 %)
[2025-04-19 06:17:12] 2025-04-19 10:16:55,818 | INFO     | sum of square deviations: 1523447549.5529363
[2025-04-19 06:17:12] 2025-04-19 10:16:55,819 | INFO     | sum of deviations: -14200874945.611769
[2025-04-19 06:17:12] 2025-04-19 10:16:55,819 | INFO     | mean x: 1745052561.6705883
[2025-04-19 06:17:12] 2025-04-19 10:16:55,819 | INFO     | mean y: 2405638.4176470586
[2025-04-19 06:17:12] 2025-04-19 10:16:55,819 | INFO     | -- intersect: 16268980230.418325
[2025-04-19 06:17:12] 2025-04-19 10:16:55,819 | INFO     | intersect: 16268980230.418325
[2025-04-19 06:17:12] 2025-04-19 10:16:55,820 | INFO     | chi2: 0.7887416120587978
[2025-04-19 06:17:12] 2025-04-19 10:16:55,820 | INFO     | current chi2=0.7887416120587978 (change=10.275946281973113 %)
[2025-04-19 06:17:12] 2025-04-19 10:16:55,820 | INFO     | left removable region: 40
[2025-04-19 06:17:12] 2025-04-19 10:16:55,820 | INFO     | sum of square deviations: 925894932.9375
[2025-04-19 06:17:12] 2025-04-19 10:16:55,821 | INFO     | sum of deviations: -1584607619.3749995
[2025-04-19 06:17:12] 2025-04-19 10:16:55,825 | INFO     | mean x: 1745052988.6875
[2025-04-19 06:17:12] 2025-04-19 10:16:55,826 | INFO     | mean y: 2419246.5694444445
[2025-04-19 06:17:12] 2025-04-19 10:16:55,826 | INFO     | -- intersect: 2988961416.440015
[2025-04-19 06:17:12] 2025-04-19 10:16:55,826 | INFO     | intersect: 2988961416.440015
[2025-04-19 06:17:12] 2025-04-19 10:16:55,826 | INFO     | chi2: 0.0015158449329467662
[2025-04-19 06:17:12] 2025-04-19 10:16:55,826 | INFO     | -- intersect: 2988961416.440015
[2025-04-19 06:17:12] 2025-04-19 10:16:55,826 | INFO     | current memory leak: -1.71 B/s (using 144 data points, chi2=0.00)
[2025-04-19 06:17:12] 2025-04-19 10:16:55,827 | INFO     | ..............................
[2025-04-19 06:17:12] 2025-04-19 10:16:55,827 | INFO     | . Timing measurements:
[2025-04-19 06:17:12] 2025-04-19 10:16:55,827 | INFO     | . get job = 0 s
[2025-04-19 06:17:12] 2025-04-19 10:16:55,827 | INFO     | . initial setup = 5 s
[2025-04-19 06:17:12] 2025-04-19 10:16:55,827 | INFO     | . payload setup = 30 s
[2025-04-19 06:17:12] 2025-04-19 10:16:55,827 | INFO     | . stage-in = 0 s
[2025-04-19 06:17:12] 2025-04-19 10:16:55,828 | INFO     | . payload execution = 11610 s
[2025-04-19 06:17:12] 2025-04-19 10:16:55,828 | INFO     | . stage-out = 4 s
[2025-04-19 06:17:12] 2025-04-19 10:16:55,828 | INFO     | . log creation = 0 s
[2025-04-19 06:17:12] 2025-04-19 10:16:55,828 | INFO     | ..............................
[2025-04-19 06:17:12] 2025-04-19 10:16:56,065 | INFO     | 
[2025-04-19 06:17:12] 2025-04-19 10:16:56,065 | INFO     | job summary report
[2025-04-19 06:17:12] 2025-04-19 10:16:56,065 | INFO     | --------------------------------------------------
[2025-04-19 06:17:12] 2025-04-19 10:16:56,065 | INFO     | PanDA job id: 6607297598
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | task id: 44075483
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | errors: (none)
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | pilot state: finished 
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | transexitcode: 0
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | exeerrorcode: 0
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | exeerrordiag: 
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | exitcode: 0
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | exitmsg: OK
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | cpuconsumptiontime: 41287 s
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | nevents: 400
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | neventsw: 0
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | pid: 1419944
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | pgrp: 1419944
[2025-04-19 06:17:12] 2025-04-19 10:16:56,066 | INFO     | corecount: 8
[2025-04-19 06:17:12] 2025-04-19 10:16:56,067 | INFO     | event service: False
[2025-04-19 06:17:12] 2025-04-19 10:16:56,067 | INFO     | sizes: {0: 2426594, 1: 2426849, 2: 2426877, 13: 2426877, 24: 2426933, 30: 2427167, 35: 2427323, 11646: 2456441, 11651: 2465382, 11652: 2465438, 11685: 2465608}
[2025-04-19 06:17:12] 2025-04-19 10:16:56,067 | INFO     | --------------------------------------------------
[2025-04-19 06:17:12] 2025-04-19 10:16:56,067 | INFO     | 
[2025-04-19 06:17:12] 2025-04-19 10:16:56,067 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-19 06:17:12] 2025-04-19 10:16:56,137 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,137 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,137 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,137 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 06:17:12] 2025-04-19 10:16:56,138 | INFO     | job 6607297598 has completed (purged errors)
[2025-04-19 06:17:12] 2025-04-19 10:16:56,139 | INFO     | overall cleanup function is called
[2025-04-19 06:17:12] 2025-04-19 10:16:57,151 | INFO     | --- collectZombieJob: --- 10, [1419944]
[2025-04-19 06:17:12] 2025-04-19 10:16:57,152 | INFO     | zombie collector waiting for pid 1419944
[2025-04-19 06:17:12] 2025-04-19 10:16:57,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 06:17:12] 2025-04-19 10:16:57,152 | INFO     | collected zombie processes
[2025-04-19 06:17:12] 2025-04-19 10:16:57,152 | INFO     | will attempt to kill all subprocesses of pid=1419944
[2025-04-19 06:17:12] 2025-04-19 10:16:58,992 | INFO     | process IDs to be killed: [1419944] (in reverse order)
[2025-04-19 06:17:12] 2025-04-19 10:16:59,456 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 06:17:12] 2025-04-19 10:16:59,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 06:17:12] 2025-04-19 10:16:59,486 | INFO     | did not find any defunct processes belonging to 1419944
[2025-04-19 06:17:12] 2025-04-19 10:16:59,523 | INFO     | did not find any defunct processes belonging to 1419944
[2025-04-19 06:17:12] 2025-04-19 10:16:59,523 | INFO     | ready for new job
[2025-04-19 06:17:12] 2025-04-19 10:16:59,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 06:17:12] 2025-04-19 10:16:59,525 | INFO     | **************************************
[2025-04-19 06:17:12] 2025-04-19 10:16:59,525 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 06:17:12] 2025-04-19 10:16:59,526 | INFO     | **************************************
[2025-04-19 06:17:12] 2025-04-19 10:16:59,526 | INFO     | 
[2025-04-19 06:17:12] 2025-04-19 10:16:59,554 | INFO     | architecture information:
[2025-04-19 06:17:12] 2025-04-19 10:16:59,557 | INFO     | executing command: cat /etc/os-release
[2025-04-19 06:17:12] 2025-04-19 10:16:59,692 | INFO     | cat /etc/os-release:
[2025-04-19 06:17:12] NAME="CentOS Linux"
[2025-04-19 06:17:12] VERSION="7 (Core)"
[2025-04-19 06:17:12] ID="centos"
[2025-04-19 06:17:12] ID_LIKE="rhel fedora"
[2025-04-19 06:17:12] VERSION_ID="7"
[2025-04-19 06:17:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 06:17:12] ANSI_COLOR="0;31"
[2025-04-19 06:17:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 06:17:12] HOME_URL="https://www.centos.org/"
[2025-04-19 06:17:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 06:17:12] 
[2025-04-19 06:17:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 06:17:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 06:17:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 06:17:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 06:17:12] 
[2025-04-19 06:17:12] 2025-04-19 10:16:59,692 | INFO     | **************************************
[2025-04-19 06:17:12] 2025-04-19 10:17:00,199 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-19 06:17:12] 2025-04-19 10:17:00,308 | INFO     | sufficient remaining disk space (93758423040 B)
[2025-04-19 06:17:12] 2025-04-19 10:17:00,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 06:17:12] 2025-04-19 10:17:00,309 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 06:17:12] 2025-04-19 10:17:00,309 | INFO     | update_server=False
[2025-04-19 06:17:12] 2025-04-19 10:17:00,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 06:17:12] 2025-04-19 10:17:00,495 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 06:17:12] 2025-04-19 10:17:00,496 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 06:17:12] 2025-04-19 10:17:00,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:17:12] 2025-04-19 10:17:00,500 | INFO     | will abort loop
[2025-04-19 06:17:12] 2025-04-19 10:17:00,905 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 06:17:12] 2025-04-19 10:17:00,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 06:17:12] 2025-04-19 10:17:00,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 06:17:12] 2025-04-19 10:17:00,964 | INFO     | all data control threads have been joined
[2025-04-19 06:17:12] 2025-04-19 10:17:00,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 06:17:12] 2025-04-19 10:17:01,084 | INFO     | all job control threads have been joined
[2025-04-19 06:17:12] 2025-04-19 10:17:01,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:17:12] 2025-04-19 10:17:01,243 | INFO     | all payload control threads have been joined
[2025-04-19 06:17:12] 2025-04-19 10:17:01,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 06:17:12] 2025-04-19 10:17:01,315 | INFO     | [job] retrieve thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:01,341 | INFO     | [payload] failed_post thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:01,505 | INFO     | [job] job monitor thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:01,799 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:01,807 | INFO     | [job] validate thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:01,970 | INFO     | [data] control thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:02,090 | INFO     | [job] control thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:02,140 | INFO     | [job] queue monitor thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:02,249 | INFO     | [payload] control thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:02,332 | INFO     | [payload] validate_post thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:02,409 | INFO     | [data] copytool_in thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:02,410 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:02,415 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:02,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:02,982 | INFO     | [data] copytool_out thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:05,261 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 06:17:12] 2025-04-19 10:17:05,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477565556544)>', '<ExcThread(monitor, started 140477063997184)>']
[2025-04-19 06:17:12] 2025-04-19 10:17:05,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 06:17:12] 2025-04-19 10:17:05,953 | INFO     | [monitor] control thread has ended
[2025-04-19 06:17:12] 2025-04-19 10:17:10,840 | INFO     | all workflow threads have been joined
[2025-04-19 06:17:12] 2025-04-19 10:17:10,845 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 06:17:12] 2025-04-19 10:17:10,846 | INFO     | traces error code: 0
[2025-04-19 06:17:12] 2025-04-19 10:17:10,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 06:17:12] 2025-04-19 10:17:11,300 [wrapper] ==== pilot stdout END ====
[2025-04-19 06:17:12] 2025-04-19 10:17:11,314 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 06:17:12] 2025-04-19 10:17:11,330 [wrapper] pilotpid: 1395173
[2025-04-19 06:17:12] 2025-04-19 10:17:11,354 [wrapper] Pilot exit status: 0
[2025-04-19 06:17:12] 2025-04-19 10:17:11,448 [wrapper] pandaids: 6607297598
[2025-04-19 06:17:12] 2025-04-19 10:17:11,600 [wrapper] cleanup supervisor_pilot 2390492 1395174
[2025-04-19 06:17:12] 2025-04-19 10:17:11,612 [wrapper] Test setup, not cleaning
[2025-04-19 06:17:12] 2025-04-19 10:17:11,636 [wrapper] apfmon messages muted
[2025-04-19 06:17:12] 2025-04-19 10:17:11,679 [wrapper] ==== wrapper stdout END ====
[2025-04-19 06:17:12] 2025-04-19 10:17:11,708 [wrapper] ==== wrapper stderr END ====
[2025-04-19 06:17:12]  *** Error codes and diagnostics ***
[2025-04-19 06:17:12]     "exeErrorCode": 0,
[2025-04-19 06:17:12]     "exeErrorDiag": "",
[2025-04-19 06:17:12]     "pilotErrorCode": 0,
[2025-04-19 06:17:12]     "pilotErrorDiag": "",
[2025-04-19 06:17:12]  *** Listing of results directory ***
[2025-04-19 06:17:12] total 414968
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas    495897 Apr 18 23:35 pilot3.tar.gz
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas      5111 Apr 18 23:42 queuedata.json
[2025-04-19 06:17:12] -rwx------. 1 boincer umatlas     37140 Apr 18 23:42 runpilot2-wrapper.sh
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas       100 Apr 19 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 06:17:12] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 03:00 run_atlas
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas       105 Apr 19 03:00 job.xml
[2025-04-19 06:17:12] -rw-r--r--. 2 boincer umatlas 226917077 Apr 19 03:00 EVNT.44075481._002997.pool.root.1
[2025-04-19 06:17:12] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 03:00 start_atlas.sh
[2025-04-19 06:17:12] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 03:00 shared
[2025-04-19 06:17:12] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 03:00 input.tar.gz
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas         0 Apr 19 03:00 boinc_lockfile
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas      2577 Apr 19 03:00 pandaJob.out
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas       467 Apr 19 03:00 setup.sh.local
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas    991292 Apr 19 03:01 agis_schedconf.cvmfs.json
[2025-04-19 06:17:12] drwx------. 4 boincer umatlas      4096 Apr 19 03:01 pilot3
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas      6858 Apr 19 06:13 init_data.xml
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas 191442083 Apr 19 06:14 HITS.44075483._077232.pool.root.1
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas       531 Apr 19 06:14 boinc_task_state.xml
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas      1056 Apr 19 06:16 memory_monitor_summary.json
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas   1618536 Apr 19 06:16 agis_ddmendpoints.agis.ALL.json
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas    358013 Apr 19 06:16 log.44075483._077232.job.log.tgz.1
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas        95 Apr 19 06:16 pilot_heartbeat.json
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas      7750 Apr 19 06:16 heartbeat.json
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas      4539 Apr 19 06:17 pilotlog.txt
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 06:17 boinc_mmap_file
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas        28 Apr 19 06:17 wrapper_checkpoint.txt
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas    992319 Apr 19 06:17 log.44075483._077232.job.log.1
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas       357 Apr 19 06:17 output.list
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas       620 Apr 19 06:17 runtime_log
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas   1372160 Apr 19 06:17 result.tar.gz
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas     11429 Apr 19 06:17 runtime_log.err
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas       661 Apr 19 06:17 coCMDm8GEQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmqsgLDmiq78Im.diag
[2025-04-19 06:17:12] -rw-r--r--. 1 boincer umatlas     20877 Apr 19 06:17 stderr.txt
[2025-04-19 06:17:12] HITS file was successfully produced:
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas 191442083 Apr 19 06:14 shared/HITS.pool.root.1
[2025-04-19 06:17:12]  *** Contents of shared directory: ***
[2025-04-19 06:17:12] total 410420
[2025-04-19 06:17:12] -rw-r--r--. 2 boincer umatlas 226917077 Apr 19 03:00 ATLAS.root_0
[2025-04-19 06:17:12] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 03:00 start_atlas.sh
[2025-04-19 06:17:12] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 03:00 input.tar.gz
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas 191442083 Apr 19 06:14 HITS.pool.root.1
[2025-04-19 06:17:12] -rw-------. 1 boincer umatlas   1372160 Apr 19 06:17 result.tar.gz
06:17:13 (1385951): run_atlas exited; CPU time 41749.125755
06:17:13 (1385951): called boinc_finish(0)

</stderr_txt>
]]>

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