Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:57:06 (444927): wrapper (7.7.26015): starting
01:57:06 (444927): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 01:57:06] Arguments: --nthreads 8
[2025-04-19 01:57:06] Threads: 8
[2025-04-19 01:57:06] Checking for CVMFS
[2025-04-19 01:57:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 01:57:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 01:57:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 01:57:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 01:57:08] 2.12.6.0 345227 74931 635900 145027 0 423 24730796 32935937 33499 130560 0 182713889 99.663 158899420 18580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 01:57:08] CVMFS is ok
[2025-04-19 01:57:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 01:57:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 01:57:08] Further information can be found at the LHC@home message board.
[2025-04-19 01:57:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 01:57:08] Checking for apptainer binary...
[2025-04-19 01:57:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 01:57:08] Running /usr/bin/apptainer --version
[2025-04-19 01:57:08] apptainer version 1.4.0-1.el9
[2025-04-19 01:57:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 01:57:10] c-3-40.aglt2.org
[2025-04-19 01:57:10] apptainer works
[2025-04-19 01:57:10] Set ATHENA_PROC_NUMBER=8
[2025-04-19 01:57:10] Set ATHENA_CORE_NUMBER=8
[2025-04-19 01:57:10] Starting ATLAS job with PandaID=6607024047
[2025-04-19 01:57:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 08:03:03]  *** The last 200 lines of the pilot log: ***
[2025-04-19 08:03:03] 2025-04-19 12:02:41,094 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-19 08:03:03] 2025-04-19 12:02:41,095 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6607024047/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 08:03:03] 2025-04-19 12:02:41,096 | INFO     | extracted standard info from prmon json
[2025-04-19 08:03:03] 2025-04-19 12:02:41,096 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 08:03:03] 2025-04-19 12:02:41,096 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 08:03:03] 2025-04-19 12:02:41,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 08:03:03] 2025-04-19 12:02:41,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 08:03:03] 2025-04-19 12:02:41,145 | INFO     | fitting pss+swap vs Time
[2025-04-19 08:03:03] 2025-04-19 12:02:41,146 | INFO     | sum of square deviations: 13873187968.383104
[2025-04-19 08:03:03] 2025-04-19 12:02:41,150 | INFO     | sum of deviations: 191429267258.55206
[2025-04-19 08:03:03] 2025-04-19 12:02:41,150 | INFO     | mean x: 1745053241.653521
[2025-04-19 08:03:03] 2025-04-19 12:02:41,150 | INFO     | mean y: 2024728.1183098592
[2025-04-19 08:03:03] 2025-04-19 12:02:41,150 | INFO     | -- intersect: -24077102876.74092
[2025-04-19 08:03:03] 2025-04-19 12:02:41,151 | INFO     | intersect: -24077102876.74092
[2025-04-19 08:03:03] 2025-04-19 12:02:41,151 | INFO     | chi2: 11.902713494998576
[2025-04-19 08:03:03] 2025-04-19 12:02:41,152 | INFO     | sum of square deviations: 13295303703.717157
[2025-04-19 08:03:03] 2025-04-19 12:02:41,154 | INFO     | sum of deviations: 281869689155.8801
[2025-04-19 08:03:03] 2025-04-19 12:02:41,155 | INFO     | mean x: 1745053089.162857
[2025-04-19 08:03:03] 2025-04-19 12:02:41,155 | INFO     | mean y: 2048601.16
[2025-04-19 08:03:03] 2025-04-19 12:02:41,155 | INFO     | -- intersect: -36994291066.15588
[2025-04-19 08:03:03] 2025-04-19 12:02:41,155 | INFO     | intersect: -36994291066.15588
[2025-04-19 08:03:03] 2025-04-19 12:02:41,155 | INFO     | chi2: 8.447304275781631
[2025-04-19 08:03:03] 2025-04-19 12:02:41,156 | INFO     | current chi2=8.447304275781631 (change=29.030432604035035 %)
[2025-04-19 08:03:03] 2025-04-19 12:02:41,156 | INFO     | sum of square deviations: 12733634518.997164
[2025-04-19 08:03:03] 2025-04-19 12:02:41,160 | INFO     | sum of deviations: 283123371843.25543
[2025-04-19 08:03:03] 2025-04-19 12:02:41,160 | INFO     | mean x: 1745052936.663768
[2025-04-19 08:03:03] 2025-04-19 12:02:41,160 | INFO     | mean y: 2048941.588405797
[2025-04-19 08:03:03] 2025-04-19 12:02:41,160 | INFO     | -- intersect: -38797970859.21006
[2025-04-19 08:03:03] 2025-04-19 12:02:41,160 | INFO     | intersect: -38797970859.21006
[2025-04-19 08:03:03] 2025-04-19 12:02:41,161 | INFO     | chi2: 8.41835139244611
[2025-04-19 08:03:03] 2025-04-19 12:02:41,161 | INFO     | current chi2=8.41835139244611 (change=0.34274701597441365 %)
[2025-04-19 08:03:03] 2025-04-19 12:02:41,161 | INFO     | right removable region: 344
[2025-04-19 08:03:03] 2025-04-19 12:02:41,162 | INFO     | sum of square deviations: 13295162183.717157
[2025-04-19 08:03:03] 2025-04-19 12:02:41,165 | INFO     | sum of deviations: 100572953959.39139
[2025-04-19 08:03:03] 2025-04-19 12:02:41,165 | INFO     | mean x: 1745053394.162857
[2025-04-19 08:03:03] 2025-04-19 12:02:41,166 | INFO     | mean y: 2048674.1685714286
[2025-04-19 08:03:03] 2025-04-19 12:02:41,166 | INFO     | -- intersect: -13198630809.287846
[2025-04-19 08:03:03] 2025-04-19 12:02:41,166 | INFO     | intersect: -13198630809.287846
[2025-04-19 08:03:03] 2025-04-19 12:02:41,166 | INFO     | chi2: 8.14209480769608
[2025-04-19 08:03:03] 2025-04-19 12:02:41,167 | INFO     | current chi2=8.14209480769608 (change=31.594633348796275 %)
[2025-04-19 08:03:03] 2025-04-19 12:02:41,167 | INFO     | sum of square deviations: 12733415773.9884
[2025-04-19 08:03:03] 2025-04-19 12:02:41,171 | INFO     | sum of deviations: 34661570468.452286
[2025-04-19 08:03:03] 2025-04-19 12:02:41,171 | INFO     | mean x: 1745053546.6724637
[2025-04-19 08:03:03] 2025-04-19 12:02:41,171 | INFO     | mean y: 2066564.7739130436
[2025-04-19 08:03:03] 2025-04-19 12:02:41,171 | INFO     | -- intersect: -4748135388.324213
[2025-04-19 08:03:03] 2025-04-19 12:02:41,171 | INFO     | intersect: -4748135388.324213
[2025-04-19 08:03:03] 2025-04-19 12:02:41,172 | INFO     | chi2: 6.277176706611977
[2025-04-19 08:03:03] 2025-04-19 12:02:41,172 | INFO     | current chi2=6.277176706611977 (change=22.90464733131508 %)
[2025-04-19 08:03:03] 2025-04-19 12:02:41,172 | INFO     | left removable region: 20
[2025-04-19 08:03:03] 2025-04-19 12:02:41,173 | INFO     | sum of square deviations: 10546894187.959806
[2025-04-19 08:03:03] 2025-04-19 12:02:41,176 | INFO     | sum of deviations: 25242498356.126556
[2025-04-19 08:03:03] 2025-04-19 12:02:41,176 | INFO     | mean x: 1745053516.2006173
[2025-04-19 08:03:03] 2025-04-19 12:02:41,176 | INFO     | mean y: 2123694.3672839506
[2025-04-19 08:03:03] 2025-04-19 12:02:41,176 | INFO     | -- intersect: -4174414889.316744
[2025-04-19 08:03:03] 2025-04-19 12:02:41,176 | INFO     | intersect: -4174414889.316744
[2025-04-19 08:03:03] 2025-04-19 12:02:41,177 | INFO     | chi2: 0.2907154528391647
[2025-04-19 08:03:03] 2025-04-19 12:02:41,177 | INFO     | -- intersect: -4174414889.316744
[2025-04-19 08:03:03] 2025-04-19 12:02:41,177 | INFO     | current memory leak: 2.39 B/s (using 324 data points, chi2=0.29)
[2025-04-19 08:03:03] 2025-04-19 12:02:41,178 | INFO     | ..............................
[2025-04-19 08:03:03] 2025-04-19 12:02:41,178 | INFO     | . Timing measurements:
[2025-04-19 08:03:03] 2025-04-19 12:02:41,178 | INFO     | . get job = 0 s
[2025-04-19 08:03:03] 2025-04-19 12:02:41,178 | INFO     | . initial setup = 7 s
[2025-04-19 08:03:03] 2025-04-19 12:02:41,178 | INFO     | . payload setup = 41 s
[2025-04-19 08:03:03] 2025-04-19 12:02:41,179 | INFO     | . stage-in = 0 s
[2025-04-19 08:03:03] 2025-04-19 12:02:41,179 | INFO     | . payload execution = 21687 s
[2025-04-19 08:03:03] 2025-04-19 12:02:41,179 | INFO     | . stage-out = 5 s
[2025-04-19 08:03:03] 2025-04-19 12:02:41,179 | INFO     | . log creation = 0 s
[2025-04-19 08:03:03] 2025-04-19 12:02:41,179 | INFO     | ..............................
[2025-04-19 08:03:03] 2025-04-19 12:02:41,560 | INFO     | 
[2025-04-19 08:03:03] 2025-04-19 12:02:41,560 | INFO     | job summary report
[2025-04-19 08:03:03] 2025-04-19 12:02:41,560 | INFO     | --------------------------------------------------
[2025-04-19 08:03:03] 2025-04-19 12:02:41,560 | INFO     | PanDA job id: 6607024047
[2025-04-19 08:03:03] 2025-04-19 12:02:41,560 | INFO     | task id: 44075483
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | errors: (none)
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | pilot state: finished 
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | transexitcode: 0
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | exeerrorcode: 0
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | exeerrordiag: 
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | exitcode: 0
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | exitmsg: OK
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | cpuconsumptiontime: 46290 s
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | nevents: 400
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | neventsw: 0
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | pid: 496186
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | pgrp: 496186
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | corecount: 8
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | event service: False
[2025-04-19 08:03:03] 2025-04-19 12:02:41,561 | INFO     | sizes: {0: 2425945, 1: 2426630, 2: 2426829, 13: 2426829, 24: 2426885, 34: 2427119, 35: 2427275, 21735: 2460175, 21742: 2469144, 21745: 2469200, 21797: 2469370}
[2025-04-19 08:03:03] 2025-04-19 12:02:41,562 | INFO     | --------------------------------------------------
[2025-04-19 08:03:03] 2025-04-19 12:02:41,562 | INFO     | 
[2025-04-19 08:03:03] 2025-04-19 12:02:41,562 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-19 08:03:03] 2025-04-19 12:02:41,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 08:03:03] 2025-04-19 12:02:41,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 08:03:03] 2025-04-19 12:02:41,740 | INFO     | job 6607024047 has completed (purged errors)
[2025-04-19 08:03:03] 2025-04-19 12:02:41,777 | INFO     | overall cleanup function is called
[2025-04-19 08:03:03] 2025-04-19 12:02:42,798 | INFO     | --- collectZombieJob: --- 10, [496186]
[2025-04-19 08:03:03] 2025-04-19 12:02:42,798 | INFO     | zombie collector waiting for pid 496186
[2025-04-19 08:03:03] 2025-04-19 12:02:42,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 08:03:03] 2025-04-19 12:02:42,799 | INFO     | collected zombie processes
[2025-04-19 08:03:03] 2025-04-19 12:02:42,799 | INFO     | will attempt to kill all subprocesses of pid=496186
[2025-04-19 08:03:03] 2025-04-19 12:02:46,146 | INFO     | process IDs to be killed: [496186] (in reverse order)
[2025-04-19 08:03:03] 2025-04-19 12:02:47,048 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 08:03:03] 2025-04-19 12:02:47,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 08:03:03] 2025-04-19 12:02:47,113 | INFO     | did not find any defunct processes belonging to 496186
[2025-04-19 08:03:03] 2025-04-19 12:02:47,175 | INFO     | did not find any defunct processes belonging to 496186
[2025-04-19 08:03:03] 2025-04-19 12:02:47,175 | INFO     | ready for new job
[2025-04-19 08:03:03] 2025-04-19 12:02:47,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 08:03:03] 2025-04-19 12:02:47,178 | INFO     | **************************************
[2025-04-19 08:03:03] 2025-04-19 12:02:47,182 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 08:03:03] 2025-04-19 12:02:47,182 | INFO     | **************************************
[2025-04-19 08:03:03] 2025-04-19 12:02:47,182 | INFO     | 
[2025-04-19 08:03:03] 2025-04-19 12:02:47,191 | INFO     | architecture information:
[2025-04-19 08:03:03] 2025-04-19 12:02:47,198 | INFO     | executing command: cat /etc/os-release
[2025-04-19 08:03:03] 2025-04-19 12:02:47,346 | INFO     | cat /etc/os-release:
[2025-04-19 08:03:03] NAME="CentOS Linux"
[2025-04-19 08:03:03] VERSION="7 (Core)"
[2025-04-19 08:03:03] ID="centos"
[2025-04-19 08:03:03] ID_LIKE="rhel fedora"
[2025-04-19 08:03:03] VERSION_ID="7"
[2025-04-19 08:03:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 08:03:03] ANSI_COLOR="0;31"
[2025-04-19 08:03:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 08:03:03] HOME_URL="https://www.centos.org/"
[2025-04-19 08:03:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 08:03:03] 
[2025-04-19 08:03:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 08:03:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 08:03:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 08:03:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 08:03:03] 
[2025-04-19 08:03:03] 2025-04-19 12:02:47,346 | INFO     | **************************************
[2025-04-19 08:03:03] 2025-04-19 12:02:47,849 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-19 08:03:03] 2025-04-19 12:02:47,916 | INFO     | sufficient remaining disk space (74075602944 B)
[2025-04-19 08:03:03] 2025-04-19 12:02:47,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 08:03:03] 2025-04-19 12:02:47,917 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 08:03:03] 2025-04-19 12:02:47,917 | INFO     | update_server=False
[2025-04-19 08:03:03] 2025-04-19 12:02:47,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 08:03:03] 2025-04-19 12:02:47,982 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 08:03:03] 2025-04-19 12:02:47,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 08:03:03] 2025-04-19 12:02:47,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 08:03:03] 2025-04-19 12:02:48,177 | INFO     | all payload control threads have been joined
[2025-04-19 08:03:03] 2025-04-19 12:02:48,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 08:03:03] 2025-04-19 12:02:48,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:03:03] 2025-04-19 12:02:48,493 | INFO     | aborting loop
[2025-04-19 08:03:03] 2025-04-19 12:02:48,757 | INFO     | all data control threads have been joined
[2025-04-19 08:03:03] 2025-04-19 12:02:48,925 | INFO     | [job] retrieve thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:49,182 | INFO     | [payload] control thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:49,287 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:49,458 | INFO     | all job control threads have been joined
[2025-04-19 08:03:03] 2025-04-19 12:02:49,510 | INFO     | [job] job monitor thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:49,763 | INFO     | [data] control thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:49,894 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:49,917 | INFO     | [job] validate thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:50,008 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:50,025 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:50,048 | INFO     | [payload] failed_post thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:50,049 | INFO     | [payload] validate_post thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:50,379 | INFO     | [data] copytool_out thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:50,420 | INFO     | [data] copytool_in thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:50,464 | INFO     | [job] control thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:50,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:03:03] 2025-04-19 12:02:50,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 08:03:03] 2025-04-19 12:02:51,659 | INFO     | [job] queue monitor thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:54,948 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 08:03:03] 2025-04-19 12:02:56,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204419979072)>', '<ExcThread(monitor, started 140204065138432)>']
[2025-04-19 08:03:03] 2025-04-19 12:02:57,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 08:03:03] 2025-04-19 12:02:57,080 | INFO     | [monitor] control thread has ended
[2025-04-19 08:03:03] 2025-04-19 12:03:01,650 | INFO     | all workflow threads have been joined
[2025-04-19 08:03:03] 2025-04-19 12:03:01,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 08:03:03] 2025-04-19 12:03:01,651 | INFO     | traces error code: 0
[2025-04-19 08:03:03] 2025-04-19 12:03:01,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 08:03:03] 2025-04-19 12:03:01,915 [wrapper] ==== pilot stdout END ====
[2025-04-19 08:03:03] 2025-04-19 12:03:01,918 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 08:03:03] 2025-04-19 12:03:01,920 [wrapper] pilotpid: 461070
[2025-04-19 08:03:03] 2025-04-19 12:03:01,922 [wrapper] Pilot exit status: 0
[2025-04-19 08:03:03] 2025-04-19 12:03:02,080 [wrapper] pandaids: 6607024047
[2025-04-19 08:03:03] 2025-04-19 12:03:02,518 [wrapper] cleanup supervisor_pilot 3824342 461071
[2025-04-19 08:03:03] 2025-04-19 12:03:02,545 [wrapper] Test setup, not cleaning
[2025-04-19 08:03:03] 2025-04-19 12:03:02,597 [wrapper] apfmon messages muted
[2025-04-19 08:03:03] 2025-04-19 12:03:02,638 [wrapper] ==== wrapper stdout END ====
[2025-04-19 08:03:03] 2025-04-19 12:03:02,657 [wrapper] ==== wrapper stderr END ====
[2025-04-19 08:03:03]  *** Error codes and diagnostics ***
[2025-04-19 08:03:03]     "exeErrorCode": 0,
[2025-04-19 08:03:03]     "exeErrorDiag": "",
[2025-04-19 08:03:03]     "pilotErrorCode": 0,
[2025-04-19 08:03:03]     "pilotErrorDiag": "",
[2025-04-19 08:03:03]  *** Listing of results directory ***
[2025-04-19 08:03:03] total 418960
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas    495897 Apr 18 19:39 pilot3.tar.gz
[2025-04-19 08:03:03] -rwx------. 1 boincer umatlas     37140 Apr 18 19:42 runpilot2-wrapper.sh
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas      5111 Apr 18 19:42 queuedata.json
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas       100 Apr 19 01:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 08:03:03] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 01:57 run_atlas
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas       105 Apr 19 01:57 job.xml
[2025-04-19 08:03:03] -rw-r--r--. 2 boincer umatlas 223897370 Apr 19 01:57 EVNT.44075481._002905.pool.root.1
[2025-04-19 08:03:03] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 01:57 shared
[2025-04-19 08:03:03] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 01:57 input.tar.gz
[2025-04-19 08:03:03] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 01:57 start_atlas.sh
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas         0 Apr 19 01:57 boinc_lockfile
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 01:57 pandaJob.out
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas       467 Apr 19 01:57 setup.sh.local
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas    991292 Apr 19 01:58 agis_schedconf.cvmfs.json
[2025-04-19 08:03:03] drwx------. 4 boincer umatlas      4096 Apr 19 01:58 pilot3
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas      6855 Apr 19 07:56 init_data.xml
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas 197482130 Apr 19 07:56 HITS.44075483._074828.pool.root.1
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas       531 Apr 19 07:56 boinc_task_state.xml
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas      1041 Apr 19 08:01 memory_monitor_summary.json
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas   1618536 Apr 19 08:01 agis_ddmendpoints.agis.ALL.json
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas    426340 Apr 19 08:01 log.44075483._074828.job.log.tgz.1
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas        95 Apr 19 08:01 pilot_heartbeat.json
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas      7718 Apr 19 08:02 heartbeat.json
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas        28 Apr 19 08:02 wrapper_checkpoint.txt
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 08:02 boinc_mmap_file
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas      4353 Apr 19 08:03 pilotlog.txt
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas   1456110 Apr 19 08:03 log.44075483._074828.job.log.1
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas       357 Apr 19 08:03 output.list
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas       620 Apr 19 08:03 runtime_log
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas   1904640 Apr 19 08:03 result.tar.gz
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas     11409 Apr 19 08:03 runtime_log.err
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas       656 Apr 19 08:03 QtuMDmBXAQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5PgLDmD5wWTo.diag
[2025-04-19 08:03:03] -rw-r--r--. 1 boincer umatlas     20913 Apr 19 08:03 stderr.txt
[2025-04-19 08:03:03] HITS file was successfully produced:
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas 197482130 Apr 19 07:56 shared/HITS.pool.root.1
[2025-04-19 08:03:03]  *** Contents of shared directory: ***
[2025-04-19 08:03:03] total 413892
[2025-04-19 08:03:03] -rw-r--r--. 2 boincer umatlas 223897370 Apr 19 01:57 ATLAS.root_0
[2025-04-19 08:03:03] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 01:57 input.tar.gz
[2025-04-19 08:03:03] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 01:57 start_atlas.sh
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas 197482130 Apr 19 07:56 HITS.pool.root.1
[2025-04-19 08:03:03] -rw-------. 1 boincer umatlas   1904640 Apr 19 08:03 result.tar.gz
08:03:05 (444927): run_atlas exited; CPU time 47435.199042
08:03:05 (444927): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN