Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:39:49 (238561): wrapper (7.7.26015): starting
01:39:49 (238561): wrapper: running run_atlas (--nthreads 9)
[2025-04-19 01:39:49] Arguments: --nthreads 9
[2025-04-19 01:39:49] Threads: 9
[2025-04-19 01:39:49] Checking for CVMFS
[2025-04-19 01:39:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 01:39:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 01:39:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 01:39:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 01:39:52] 2.12.6.0 345227 74913 631232 145027 2 283 24717842 32935937 34619 130560 0 182510513 99.663 158899418 18580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 01:39:52] CVMFS is ok
[2025-04-19 01:39:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 01:39:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 01:39:52] Further information can be found at the LHC@home message board.
[2025-04-19 01:39:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 01:39:52] Checking for apptainer binary...
[2025-04-19 01:39:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 01:39:52] Running /usr/bin/apptainer --version
[2025-04-19 01:39:52] apptainer version 1.4.0-1.el9
[2025-04-19 01:39:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 01:39:53] c-3-40.aglt2.org
[2025-04-19 01:39:53] apptainer works
[2025-04-19 01:39:53] Set ATHENA_PROC_NUMBER=9
[2025-04-19 01:39:53] Set ATHENA_CORE_NUMBER=9
[2025-04-19 01:39:54] Starting ATLAS job with PandaID=6607183089
[2025-04-19 01:39:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 14:37:18]  *** The last 200 lines of the pilot log: ***
[2025-04-19 14:37:18] 2025-04-19 18:36:40,116 | INFO     | monitor loop #2188: job 0:6607183089 is in state 'finished'
[2025-04-19 14:37:18] 2025-04-19 18:36:40,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 14:37:18] 2025-04-19 18:36:42,621 | INFO     | monitor loop #2189: job 0:6607183089 is in state 'finished'
[2025-04-19 14:37:18] 2025-04-19 18:36:42,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 14:37:18] 2025-04-19 18:36:45,144 | INFO     | monitor loop #2190: job 0:6607183089 is in state 'finished'
[2025-04-19 14:37:18] 2025-04-19 18:36:45,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 14:37:18] 2025-04-19 18:36:47,662 | INFO     | monitor loop #2191: job 0:6607183089 is in state 'finished'
[2025-04-19 14:37:18] 2025-04-19 18:36:47,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 14:37:18] 2025-04-19 18:36:50,197 | INFO     | monitor loop #2192: job 0:6607183089 is in state 'finished'
[2025-04-19 14:37:18] 2025-04-19 18:36:50,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 14:37:18] 2025-04-19 18:36:52,806 | INFO     | monitor loop #2193: job 0:6607183089 is in state 'finished'
[2025-04-19 14:37:18] 2025-04-19 18:36:52,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 14:37:18] 2025-04-19 18:36:53,357 | INFO     | PID=252234 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 14:37:18] 2025-04-19 18:36:53,357 | INFO     | .. there are 82 such processes running
[2025-04-19 14:37:18] 2025-04-19 18:36:55,334 | INFO     | monitor loop #2194: job 0:6607183089 is in state 'finished'
[2025-04-19 14:37:18] 2025-04-19 18:36:55,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 14:37:18] 2025-04-19 18:36:56,742 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-19 14:37:18] 2025-04-19 18:36:56,743 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6607183089/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 14:37:18] 2025-04-19 18:36:56,750 | INFO     | extracted standard info from prmon json
[2025-04-19 14:37:18] 2025-04-19 18:36:56,750 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 14:37:18] 2025-04-19 18:36:56,750 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 14:37:18] 2025-04-19 18:36:56,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 14:37:18] 2025-04-19 18:36:56,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 14:37:18] 2025-04-19 18:36:56,833 | INFO     | fitting pss+swap vs Time
[2025-04-19 14:37:18] 2025-04-19 18:36:56,854 | INFO     | sum of square deviations: 135046019041.88913
[2025-04-19 14:37:18] 2025-04-19 18:36:56,899 | INFO     | sum of deviations: 1192517312028.6555
[2025-04-19 14:37:18] 2025-04-19 18:36:56,899 | INFO     | mean x: 1745064610.9472296
[2025-04-19 14:37:18] 2025-04-19 18:36:56,899 | INFO     | mean y: 2050576.2414248022
[2025-04-19 14:37:18] 2025-04-19 18:36:56,899 | INFO     | -- intersect: -15407657713.772089
[2025-04-19 14:37:18] 2025-04-19 18:36:56,899 | INFO     | intersect: -15407657713.772089
[2025-04-19 14:37:18] 2025-04-19 18:36:56,900 | INFO     | chi2: 13.318034477538012
[2025-04-19 14:37:18] 2025-04-19 18:36:56,925 | INFO     | sum of square deviations: 132391180304.17831
[2025-04-19 14:37:18] 2025-04-19 18:36:56,996 | INFO     | sum of deviations: 1277083790097.4941
[2025-04-19 14:37:18] 2025-04-19 18:36:56,996 | INFO     | mean x: 1745064458.4475431
[2025-04-19 14:37:18] 2025-04-19 18:36:56,997 | INFO     | mean y: 2055415.8353253652
[2025-04-19 14:37:18] 2025-04-19 18:36:56,997 | INFO     | -- intersect: -16831343360.71659
[2025-04-19 14:37:18] 2025-04-19 18:36:56,997 | INFO     | intersect: -16831343360.71659
[2025-04-19 14:37:18] 2025-04-19 18:36:56,998 | INFO     | chi2: 11.79978443833243
[2025-04-19 14:37:18] 2025-04-19 18:36:57,036 | INFO     | current chi2=11.79978443833243 (change=11.399955764990981 %)
[2025-04-19 14:37:18] 2025-04-19 18:36:57,036 | INFO     | right removable region: 752
[2025-04-19 14:37:18] 2025-04-19 18:36:57,038 | INFO     | sum of square deviations: 132391065868.38371
[2025-04-19 14:37:18] 2025-04-19 18:36:57,121 | INFO     | sum of deviations: 1004608818973.7853
[2025-04-19 14:37:18] 2025-04-19 18:36:57,121 | INFO     | mean x: 1745064763.4501991
[2025-04-19 14:37:18] 2025-04-19 18:36:57,122 | INFO     | mean y: 2061365.1009296149
[2025-04-19 14:37:18] 2025-04-19 18:36:57,122 | INFO     | -- intersect: -13239825007.99709
[2025-04-19 14:37:18] 2025-04-19 18:36:57,122 | INFO     | intersect: -13239825007.99709
[2025-04-19 14:37:18] 2025-04-19 18:36:57,149 | INFO     | chi2: 10.015135806885915
[2025-04-19 14:37:18] 2025-04-19 18:36:57,150 | INFO     | current chi2=10.015135806885915 (change=24.800196126708588 %)
[2025-04-19 14:37:18] 2025-04-19 18:36:57,150 | INFO     | left removable region: 10
[2025-04-19 14:37:18] 2025-04-19 18:36:57,150 | INFO     | sum of square deviations: 126673282990.25334
[2025-04-19 14:37:18] 2025-04-19 18:36:57,198 | INFO     | sum of deviations: 951114295255.3998
[2025-04-19 14:37:18] 2025-04-19 18:36:57,198 | INFO     | mean x: 1745064732.9514825
[2025-04-19 14:37:18] 2025-04-19 18:36:57,198 | INFO     | mean y: 2074587.4555256064
[2025-04-19 14:37:18] 2025-04-19 18:36:57,198 | INFO     | -- intersect: -13100577956.758621
[2025-04-19 14:37:18] 2025-04-19 18:36:57,198 | INFO     | intersect: -13100577956.758621
[2025-04-19 14:37:18] 2025-04-19 18:36:57,203 | INFO     | chi2: 6.775932735023723
[2025-04-19 14:37:18] 2025-04-19 18:36:57,204 | INFO     | -- intersect: -13100577956.758621
[2025-04-19 14:37:18] 2025-04-19 18:36:57,204 | INFO     | current memory leak: 7.51 B/s (using 742 data points, chi2=6.78)
[2025-04-19 14:37:18] 2025-04-19 18:36:57,205 | INFO     | ..............................
[2025-04-19 14:37:18] 2025-04-19 18:36:57,205 | INFO     | . Timing measurements:
[2025-04-19 14:37:18] 2025-04-19 18:36:57,205 | INFO     | . get job = 1 s
[2025-04-19 14:37:18] 2025-04-19 18:36:57,205 | INFO     | . initial setup = 10 s
[2025-04-19 14:37:18] 2025-04-19 18:36:57,205 | INFO     | . payload setup = 69 s
[2025-04-19 14:37:18] 2025-04-19 18:36:57,206 | INFO     | . stage-in = 0 s
[2025-04-19 14:37:18] 2025-04-19 18:36:57,206 | INFO     | . payload execution = 46273 s
[2025-04-19 14:37:18] 2025-04-19 18:36:57,206 | INFO     | . stage-out = 7 s
[2025-04-19 14:37:18] 2025-04-19 18:36:57,206 | INFO     | . log creation = 0 s
[2025-04-19 14:37:18] 2025-04-19 18:36:57,206 | INFO     | ..............................
[2025-04-19 14:37:18] 2025-04-19 18:36:57,651 | INFO     | 
[2025-04-19 14:37:18] 2025-04-19 18:36:57,651 | INFO     | job summary report
[2025-04-19 14:37:18] 2025-04-19 18:36:57,651 | INFO     | --------------------------------------------------
[2025-04-19 14:37:18] 2025-04-19 18:36:57,651 | INFO     | PanDA job id: 6607183089
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | task id: 44075483
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | errors: (none)
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | pilot state: finished 
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | transexitcode: 0
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | exeerrorcode: 0
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | exeerrordiag: 
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | exitcode: 0
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | exitmsg: OK
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | cpuconsumptiontime: 45440 s
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | nevents: 400
[2025-04-19 14:37:18] 2025-04-19 18:36:57,652 | INFO     | neventsw: 0
[2025-04-19 14:37:18] 2025-04-19 18:36:57,653 | INFO     | pid: 292391
[2025-04-19 14:37:18] 2025-04-19 18:36:57,653 | INFO     | pgrp: 292391
[2025-04-19 14:37:18] 2025-04-19 18:36:57,653 | INFO     | corecount: 9
[2025-04-19 14:37:18] 2025-04-19 18:36:57,653 | INFO     | event service: False
[2025-04-19 14:37:18] 2025-04-19 18:36:57,653 | INFO     | sizes: {0: 2425996, 1: 2426681, 2: 2426709, 3: 2426709, 4: 2426880, 5: 2426908, 16: 2427092, 27: 2427120, 38: 2427148, 50: 2427176, 56: 2427410, 61: 2427718, 46349
[2025-04-19 14:37:18] 2025-04-19 18:36:57,653 | INFO     | --------------------------------------------------
[2025-04-19 14:37:18] 2025-04-19 18:36:57,653 | INFO     | 
[2025-04-19 14:37:18] 2025-04-19 18:36:57,653 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 14:37:18] 2025-04-19 18:36:57,957 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,959 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 14:37:18] 2025-04-19 18:36:57,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 14:37:18] 2025-04-19 18:36:57,969 | INFO     | job 6607183089 has completed (purged errors)
[2025-04-19 14:37:18] 2025-04-19 18:36:57,969 | INFO     | overall cleanup function is called
[2025-04-19 14:37:18] 2025-04-19 18:36:58,981 | INFO     | --- collectZombieJob: --- 10, [292391]
[2025-04-19 14:37:18] 2025-04-19 18:36:58,981 | INFO     | zombie collector waiting for pid 292391
[2025-04-19 14:37:18] 2025-04-19 18:36:58,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 14:37:18] 2025-04-19 18:36:58,981 | INFO     | collected zombie processes
[2025-04-19 14:37:18] 2025-04-19 18:36:58,982 | INFO     | will attempt to kill all subprocesses of pid=292391
[2025-04-19 14:37:18] 2025-04-19 18:37:02,487 | INFO     | process IDs to be killed: [292391] (in reverse order)
[2025-04-19 14:37:18] 2025-04-19 18:37:03,639 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 14:37:18] 2025-04-19 18:37:03,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 14:37:18] 2025-04-19 18:37:03,808 | INFO     | did not find any defunct processes belonging to 292391
[2025-04-19 14:37:18] 2025-04-19 18:37:03,953 | INFO     | did not find any defunct processes belonging to 292391
[2025-04-19 14:37:18] 2025-04-19 18:37:03,953 | INFO     | ready for new job
[2025-04-19 14:37:18] 2025-04-19 18:37:03,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 14:37:18] 2025-04-19 18:37:04,011 | INFO     | **************************************
[2025-04-19 14:37:18] 2025-04-19 18:37:04,011 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 14:37:18] 2025-04-19 18:37:04,011 | INFO     | **************************************
[2025-04-19 14:37:18] 2025-04-19 18:37:04,011 | INFO     | 
[2025-04-19 14:37:18] 2025-04-19 18:37:04,114 | INFO     | architecture information:
[2025-04-19 14:37:18] 2025-04-19 18:37:04,115 | INFO     | executing command: cat /etc/os-release
[2025-04-19 14:37:18] 2025-04-19 18:37:04,207 | INFO     | cat /etc/os-release:
[2025-04-19 14:37:18] NAME="CentOS Linux"
[2025-04-19 14:37:18] VERSION="7 (Core)"
[2025-04-19 14:37:18] ID="centos"
[2025-04-19 14:37:18] ID_LIKE="rhel fedora"
[2025-04-19 14:37:18] VERSION_ID="7"
[2025-04-19 14:37:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 14:37:18] ANSI_COLOR="0;31"
[2025-04-19 14:37:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 14:37:18] HOME_URL="https://www.centos.org/"
[2025-04-19 14:37:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 14:37:18] 
[2025-04-19 14:37:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 14:37:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 14:37:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 14:37:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 14:37:18] 
[2025-04-19 14:37:18] 2025-04-19 18:37:04,208 | INFO     | **************************************
[2025-04-19 14:37:18] 2025-04-19 18:37:04,710 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 14:37:18] 2025-04-19 18:37:04,860 | INFO     | sufficient remaining disk space (74446798848 B)
[2025-04-19 14:37:18] 2025-04-19 18:37:04,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 14:37:18] 2025-04-19 18:37:04,861 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 14:37:18] 2025-04-19 18:37:04,861 | INFO     | update_server=False
[2025-04-19 14:37:18] 2025-04-19 18:37:04,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 14:37:18] 2025-04-19 18:37:04,870 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 14:37:18] 2025-04-19 18:37:04,870 | INFO     | aborting loop
[2025-04-19 14:37:18] 2025-04-19 18:37:05,569 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 14:37:18] 2025-04-19 18:37:05,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 14:37:18] 2025-04-19 18:37:05,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 14:37:18] 2025-04-19 18:37:05,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 14:37:18] 2025-04-19 18:37:05,867 | INFO     | [job] retrieve thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:05,876 | INFO     | [job] job monitor thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:05,908 | INFO     | all job control threads have been joined
[2025-04-19 14:37:18] 2025-04-19 18:37:05,962 | INFO     | all data control threads have been joined
[2025-04-19 14:37:18] 2025-04-19 18:37:06,034 | INFO     | [data] copytool_in thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:06,197 | INFO     | all payload control threads have been joined
[2025-04-19 14:37:18] 2025-04-19 18:37:06,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 14:37:18] 2025-04-19 18:37:06,576 | INFO     | [payload] validate_post thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:06,620 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 14:37:18] 2025-04-19 18:37:06,677 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:06,819 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:06,914 | INFO     | [job] control thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:06,968 | INFO     | [data] control thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:07,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:07,183 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:07,184 | INFO     | [job] validate thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:07,226 | INFO     | [payload] control thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:07,291 | INFO     | [payload] failed_post thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:07,625 | INFO     | [job] queue monitor thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:07,672 | INFO     | [data] copytool_out thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:10,431 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 14:37:18] 2025-04-19 18:37:11,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978846197568)>', '<ExcThread(monitor, started 139978185094912)>']
[2025-04-19 14:37:18] 2025-04-19 18:37:11,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 14:37:18] 2025-04-19 18:37:11,613 | INFO     | [monitor] control thread has ended
[2025-04-19 14:37:18] 2025-04-19 18:37:16,374 | INFO     | all workflow threads have been joined
[2025-04-19 14:37:18] 2025-04-19 18:37:16,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 14:37:18] 2025-04-19 18:37:16,401 | INFO     | traces error code: 0
[2025-04-19 14:37:18] 2025-04-19 18:37:16,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 14:37:18] 2025-04-19 18:37:17,010 [wrapper] ==== pilot stdout END ====
[2025-04-19 14:37:18] 2025-04-19 18:37:17,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 14:37:18] 2025-04-19 18:37:17,061 [wrapper] pilotpid: 252234
[2025-04-19 14:37:18] 2025-04-19 18:37:17,064 [wrapper] Pilot exit status: 0
[2025-04-19 14:37:18] 2025-04-19 18:37:17,235 [wrapper] pandaids: 6607183089
[2025-04-19 14:37:18] 2025-04-19 18:37:17,520 [wrapper] cleanup supervisor_pilot 3044761 252235
[2025-04-19 14:37:18] 2025-04-19 18:37:17,550 [wrapper] Test setup, not cleaning
[2025-04-19 14:37:18] 2025-04-19 18:37:17,591 [wrapper] apfmon messages muted
[2025-04-19 14:37:18] 2025-04-19 18:37:17,652 [wrapper] ==== wrapper stdout END ====
[2025-04-19 14:37:18] 2025-04-19 18:37:17,670 [wrapper] ==== wrapper stderr END ====
[2025-04-19 14:37:18]  *** Error codes and diagnostics ***
[2025-04-19 14:37:18]     "exeErrorCode": 0,
[2025-04-19 14:37:18]     "exeErrorDiag": "",
[2025-04-19 14:37:18]     "pilotErrorCode": 0,
[2025-04-19 14:37:18]     "pilotErrorDiag": "",
[2025-04-19 14:37:18]  *** Listing of results directory ***
[2025-04-19 14:37:18] total 425732
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas    495897 Apr 18 22:23 pilot3.tar.gz
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas      5111 Apr 18 22:41 queuedata.json
[2025-04-19 14:37:18] -rwx------. 1 boincer umatlas     37140 Apr 18 22:41 runpilot2-wrapper.sh
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas       100 Apr 19 01:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 14:37:18] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 01:39 run_atlas
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas       105 Apr 19 01:39 job.xml
[2025-04-19 14:37:18] -rw-r--r--. 2 boincer umatlas 224614498 Apr 19 01:39 EVNT.44075481._002972.pool.root.1
[2025-04-19 14:37:18] -rw-r--r--. 2 boincer umatlas    508888 Apr 19 01:39 input.tar.gz
[2025-04-19 14:37:18] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 01:39 start_atlas.sh
[2025-04-19 14:37:18] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 01:39 shared
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas         0 Apr 19 01:39 boinc_lockfile
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas      2579 Apr 19 01:39 pandaJob.out
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas       467 Apr 19 01:39 setup.sh.local
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas    991292 Apr 19 01:41 agis_schedconf.cvmfs.json
[2025-04-19 14:37:18] drwx------. 4 boincer umatlas      4096 Apr 19 01:41 pilot3
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas 200027217 Apr 19 14:33 HITS.44075483._076578.pool.root.1
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas       531 Apr 19 14:33 boinc_task_state.xml
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas      1044 Apr 19 14:35 memory_monitor_summary.json
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas   1618536 Apr 19 14:36 agis_ddmendpoints.agis.ALL.json
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas    650344 Apr 19 14:36 log.44075483._076578.job.log.tgz.1
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas        95 Apr 19 14:36 pilot_heartbeat.json
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas      7725 Apr 19 14:36 heartbeat.json
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas      6855 Apr 19 14:37 init_data.xml
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 14:37 boinc_mmap_file
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas        28 Apr 19 14:37 wrapper_checkpoint.txt
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas      4353 Apr 19 14:37 pilotlog.txt
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas   3077512 Apr 19 14:37 log.44075483._076578.job.log.1
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas       357 Apr 19 14:37 output.list
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas       620 Apr 19 14:37 runtime_log
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas   3747840 Apr 19 14:37 result.tar.gz
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas     11409 Apr 19 14:37 runtime_log.err
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas       656 Apr 19 14:37 BARMDmXKDQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHmgLDmLu3HJn.diag
[2025-04-19 14:37:18] -rw-r--r--. 1 boincer umatlas      4127 Apr 19 14:37 stderr.txt
[2025-04-19 14:37:18] HITS file was successfully produced:
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas 200027217 Apr 19 14:33 shared/HITS.pool.root.1
[2025-04-19 14:37:18]  *** Contents of shared directory: ***
[2025-04-19 14:37:18] total 418880
[2025-04-19 14:37:18] -rw-r--r--. 2 boincer umatlas 224614498 Apr 19 01:39 ATLAS.root_0
[2025-04-19 14:37:18] -rw-r--r--. 2 boincer umatlas    508888 Apr 19 01:39 input.tar.gz
[2025-04-19 14:37:18] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 01:39 start_atlas.sh
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas 200027217 Apr 19 14:33 HITS.pool.root.1
[2025-04-19 14:37:18] -rw-------. 1 boincer umatlas   3747840 Apr 19 14:37 result.tar.gz
14:37:20 (238561): run_atlas exited; CPU time 48537.286264
14:37:20 (238561): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN