Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:34:46 (9298): wrapper (7.7.26015): starting
01:34:46 (9298): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 01:34:46] Arguments: --nthreads 12
[2025-04-19 01:34:46] Threads: 12
[2025-04-19 01:34:46] Checking for CVMFS
[2025-04-19 01:34:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 01:34:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 01:34:46] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 01:34:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 01:34:46] 2.11.2.0 10568 276872 164232 145027 0 56 19266691 20275201 1 130560 0 23635696 99.990 7230060 51263 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 01:34:46] CVMFS is ok
[2025-04-19 01:34:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 01:34:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 01:34:46] Further information can be found at the LHC@home message board.
[2025-04-19 01:34:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 01:34:46] Checking for apptainer binary...
[2025-04-19 01:34:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 01:34:46] Running /usr/bin/apptainer --version
[2025-04-19 01:34:46] apptainer version 1.3.2-1.el7
[2025-04-19 01:34:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 01:34:48] c-205-24.aglt2.org
[2025-04-19 01:34:48] apptainer works
[2025-04-19 01:34:48] Set ATHENA_PROC_NUMBER=12
[2025-04-19 01:34:48] Set ATHENA_CORE_NUMBER=12
[2025-04-19 01:34:48] Starting ATLAS job with PandaID=6606652414
[2025-04-19 01:34:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 02:57:27]  *** The last 200 lines of the pilot log: ***
[2025-04-19 02:57:27]  is_altstaged=None
[2025-04-19 02:57:27]  is_tar=False
[2025-04-19 02:57:27]  lfn=log.44075483._071228.job.log.tgz.1
[2025-04-19 02:57:27]  mtime=0
[2025-04-19 02:57:27]  protocol_id=None
[2025-04-19 02:57:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 02:57:27]  replicas=None
[2025-04-19 02:57:27]  scope=mc23_13p6TeV
[2025-04-19 02:57:27]  status=None
[2025-04-19 02:57:27]  status_code=0
[2025-04-19 02:57:27]  storage_token=
[2025-04-19 02:57:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606652414/log.44075483._071228.job.log.tgz.1
[2025-04-19 02:57:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/01/log.44075483._071228.job.log.tgz.1
[2025-04-19 02:57:27]  workdir=None
[2025-04-19 02:57:27] ]
[2025-04-19 02:57:27] 2025-04-19 06:57:03,028 | INFO     | transferring file log.44075483._071228.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606652414/log.44075483._071228.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 02:57:27] 2025-04-19 06:57:03,029 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606652414/log.44075483._071228.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._071228.job
[2025-04-19 02:57:27] 2025-04-19 06:57:03,050 | INFO     | adding to output.list: log.44075483._071228.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/01/log.44075483._071228.job.log.tg
[2025-04-19 02:57:27] 2025-04-19 06:57:03,051 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 02:57:27] 2025-04-19 06:57:03,051 | INFO     | summary of transferred files:
[2025-04-19 02:57:27] 2025-04-19 06:57:03,051 | INFO     |  -- lfn=log.44075483._071228.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 02:57:27] 2025-04-19 06:57:03,052 | INFO     | stage-out finished correctly
[2025-04-19 02:57:27] 2025-04-19 06:57:03,140 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 02:57:27] 2025-04-19 06:57:04,012 | INFO     | job 6606652414 has state=finished
[2025-04-19 02:57:27] 2025-04-19 06:57:04,012 | INFO     | preparing for final server update for job 6606652414 in state='finished'
[2025-04-19 02:57:27] 2025-04-19 06:57:04,013 | INFO     | this job has now completed (state=finished)
[2025-04-19 02:57:27] 2025-04-19 06:57:04,013 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 02:57:27] 2025-04-19 06:57:04,013 | INFO     | log transfer has been attempted: DONE
[2025-04-19 02:57:27] 2025-04-19 06:57:04,014 | INFO     | job 6606652414 has finished - writing final server update
[2025-04-19 02:57:27] 2025-04-19 06:57:04,014 | INFO     | total number of processed events: 400 (read)
[2025-04-19 02:57:27] 2025-04-19 06:57:04,016 | INFO     | executing command: lscpu
[2025-04-19 02:57:27] 2025-04-19 06:57:04,042 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 02:57:27] 2025-04-19 06:57:04,681 | INFO     | PID=13815 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 02:57:27] 2025-04-19 06:57:08,583 | WARNING  | process 21146 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 02:57:27] 2025-04-19 06:57:08,584 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606652414/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 02:57:27] 2025-04-19 06:57:08,671 | INFO     | number of running child processes to parent process 21146: 1
[2025-04-19 02:57:27] 2025-04-19 06:57:08,671 | INFO     | maximum number of monitored processes: 6
[2025-04-19 02:57:27] 2025-04-19 06:57:08,960 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 02:57:27] 2025-04-19 06:57:08,960 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606652414/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 02:57:27] 2025-04-19 06:57:08,961 | INFO     | extracted standard info from prmon json
[2025-04-19 02:57:27] 2025-04-19 06:57:08,961 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 02:57:27] 2025-04-19 06:57:08,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 02:57:27] 2025-04-19 06:57:08,961 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 02:57:27] 2025-04-19 06:57:08,962 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 02:57:27] 2025-04-19 06:57:08,964 | INFO     | fitting pss+swap vs Time
[2025-04-19 02:57:27] 2025-04-19 06:57:08,965 | INFO     | sum of square deviations: 125630262.5
[2025-04-19 02:57:27] 2025-04-19 06:57:08,965 | INFO     | sum of deviations: 18485156685.5
[2025-04-19 02:57:27] 2025-04-19 06:57:08,966 | INFO     | mean x: 1745043461.5
[2025-04-19 02:57:27] 2025-04-19 06:57:08,966 | INFO     | mean y: 2579098.554054054
[2025-04-19 02:57:27] 2025-04-19 06:57:08,966 | INFO     | -- intersect: -256762002674.36703
[2025-04-19 02:57:27] 2025-04-19 06:57:08,966 | INFO     | intersect: -256762002674.36703
[2025-04-19 02:57:27] 2025-04-19 06:57:08,966 | INFO     | chi2: 2.2312918367742736
[2025-04-19 02:57:27] 2025-04-19 06:57:08,967 | INFO     | -- intersect: -256762002674.36703
[2025-04-19 02:57:27] 2025-04-19 06:57:08,967 | INFO     | current memory leak: 147.14 B/s (using 74 data points, chi2=2.23)
[2025-04-19 02:57:27] 2025-04-19 06:57:08,967 | INFO     | ..............................
[2025-04-19 02:57:27] 2025-04-19 06:57:08,968 | INFO     | . Timing measurements:
[2025-04-19 02:57:27] 2025-04-19 06:57:08,968 | INFO     | . get job = 0 s
[2025-04-19 02:57:27] 2025-04-19 06:57:08,968 | INFO     | . initial setup = 2 s
[2025-04-19 02:57:27] 2025-04-19 06:57:08,968 | INFO     | . payload setup = 7 s
[2025-04-19 02:57:27] 2025-04-19 06:57:08,968 | INFO     | . stage-in = 0 s
[2025-04-19 02:57:27] 2025-04-19 06:57:08,968 | INFO     | . payload execution = 4896 s
[2025-04-19 02:57:27] 2025-04-19 06:57:08,969 | INFO     | . stage-out = 0 s
[2025-04-19 02:57:27] 2025-04-19 06:57:08,969 | INFO     | . log creation = 0 s
[2025-04-19 02:57:27] 2025-04-19 06:57:08,969 | INFO     | ..............................
[2025-04-19 02:57:27] 2025-04-19 06:57:09,057 | INFO     | 
[2025-04-19 02:57:27] 2025-04-19 06:57:09,057 | INFO     | job summary report
[2025-04-19 02:57:27] 2025-04-19 06:57:09,057 | INFO     | --------------------------------------------------
[2025-04-19 02:57:27] 2025-04-19 06:57:09,057 | INFO     | PanDA job id: 6606652414
[2025-04-19 02:57:27] 2025-04-19 06:57:09,057 | INFO     | task id: 44075483
[2025-04-19 02:57:27] 2025-04-19 06:57:09,057 | INFO     | errors: (none)
[2025-04-19 02:57:27] 2025-04-19 06:57:09,058 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 02:57:27] 2025-04-19 06:57:09,058 | INFO     | pilot state: finished 
[2025-04-19 02:57:27] 2025-04-19 06:57:09,058 | INFO     | transexitcode: 0
[2025-04-19 02:57:27] 2025-04-19 06:57:09,058 | INFO     | exeerrorcode: 0
[2025-04-19 02:57:27] 2025-04-19 06:57:09,058 | INFO     | exeerrordiag: 
[2025-04-19 02:57:27] 2025-04-19 06:57:09,058 | INFO     | exitcode: 0
[2025-04-19 02:57:27] 2025-04-19 06:57:09,059 | INFO     | exitmsg: OK
[2025-04-19 02:57:27] 2025-04-19 06:57:09,059 | INFO     | cpuconsumptiontime: 46149 s
[2025-04-19 02:57:27] 2025-04-19 06:57:09,059 | INFO     | nevents: 400
[2025-04-19 02:57:27] 2025-04-19 06:57:09,059 | INFO     | neventsw: 0
[2025-04-19 02:57:27] 2025-04-19 06:57:09,059 | INFO     | pid: 21146
[2025-04-19 02:57:27] 2025-04-19 06:57:09,059 | INFO     | pgrp: 21146
[2025-04-19 02:57:27] 2025-04-19 06:57:09,059 | INFO     | corecount: 12
[2025-04-19 02:57:27] 2025-04-19 06:57:09,060 | INFO     | event service: False
[2025-04-19 02:57:27] 2025-04-19 06:57:09,060 | INFO     | sizes: {0: 2426773, 5: 2426979, 11: 2427035, 4904: 2453156, 4905: 2462153, 4911: 2462267}
[2025-04-19 02:57:27] 2025-04-19 06:57:09,060 | INFO     | --------------------------------------------------
[2025-04-19 02:57:27] 2025-04-19 06:57:09,060 | INFO     | 
[2025-04-19 02:57:27] 2025-04-19 06:57:09,060 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 02:57:27] 2025-04-19 06:57:09,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,084 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,085 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 02:57:27] 2025-04-19 06:57:09,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,085 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 02:57:27] 2025-04-19 06:57:09,085 | INFO     | job 6606652414 has completed (purged errors)
[2025-04-19 02:57:27] 2025-04-19 06:57:09,086 | INFO     | overall cleanup function is called
[2025-04-19 02:57:27] 2025-04-19 06:57:10,094 | INFO     | --- collectZombieJob: --- 10, [21146]
[2025-04-19 02:57:27] 2025-04-19 06:57:10,094 | INFO     | zombie collector waiting for pid 21146
[2025-04-19 02:57:27] 2025-04-19 06:57:10,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 02:57:27] 2025-04-19 06:57:10,095 | INFO     | collected zombie processes
[2025-04-19 02:57:27] 2025-04-19 06:57:10,095 | INFO     | will attempt to kill all subprocesses of pid=21146
[2025-04-19 02:57:27] 2025-04-19 06:57:10,185 | INFO     | process IDs to be killed: [21146] (in reverse order)
[2025-04-19 02:57:27] 2025-04-19 06:57:10,234 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 02:57:27] 2025-04-19 06:57:10,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 02:57:27] 2025-04-19 06:57:10,238 | INFO     | did not find any defunct processes belonging to 21146
[2025-04-19 02:57:27] 2025-04-19 06:57:10,241 | INFO     | did not find any defunct processes belonging to 21146
[2025-04-19 02:57:27] 2025-04-19 06:57:10,241 | INFO     | ready for new job
[2025-04-19 02:57:27] 2025-04-19 06:57:10,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 02:57:27] 2025-04-19 06:57:10,242 | INFO     | **************************************
[2025-04-19 02:57:27] 2025-04-19 06:57:10,242 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 02:57:27] 2025-04-19 06:57:10,242 | INFO     | **************************************
[2025-04-19 02:57:27] 2025-04-19 06:57:10,242 | INFO     | 
[2025-04-19 02:57:27] 2025-04-19 06:57:10,243 | INFO     | architecture information:
[2025-04-19 02:57:27] 2025-04-19 06:57:10,243 | INFO     | executing command: cat /etc/os-release
[2025-04-19 02:57:27] 2025-04-19 06:57:10,258 | INFO     | cat /etc/os-release:
[2025-04-19 02:57:27] NAME="CentOS Linux"
[2025-04-19 02:57:27] VERSION="7 (Core)"
[2025-04-19 02:57:27] ID="centos"
[2025-04-19 02:57:27] ID_LIKE="rhel fedora"
[2025-04-19 02:57:27] VERSION_ID="7"
[2025-04-19 02:57:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 02:57:27] ANSI_COLOR="0;31"
[2025-04-19 02:57:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 02:57:27] HOME_URL="https://www.centos.org/"
[2025-04-19 02:57:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 02:57:27] 
[2025-04-19 02:57:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 02:57:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 02:57:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 02:57:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 02:57:27] 
[2025-04-19 02:57:27] 2025-04-19 06:57:10,258 | INFO     | **************************************
[2025-04-19 02:57:27] 2025-04-19 06:57:10,761 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 02:57:27] 2025-04-19 06:57:10,776 | INFO     | sufficient remaining disk space (29395779584 B)
[2025-04-19 02:57:27] 2025-04-19 06:57:10,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 02:57:27] 2025-04-19 06:57:10,777 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 02:57:27] 2025-04-19 06:57:10,777 | INFO     | update_server=False
[2025-04-19 02:57:27] 2025-04-19 06:57:10,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 02:57:27] 2025-04-19 06:57:10,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:57:27] 2025-04-19 06:57:10,778 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 02:57:27] 2025-04-19 06:57:10,778 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 02:57:27] 2025-04-19 06:57:10,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 02:57:27] 2025-04-19 06:57:10,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 02:57:27] 2025-04-19 06:57:11,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 02:57:27] 2025-04-19 06:57:11,174 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 02:57:27] 2025-04-19 06:57:11,175 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 02:57:27] 2025-04-19 06:57:11,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:57:27] 2025-04-19 06:57:11,175 | INFO     | will abort loop
[2025-04-19 02:57:27] 2025-04-19 06:57:11,559 | INFO     | all data control threads have been joined
[2025-04-19 02:57:27] 2025-04-19 06:57:11,707 | INFO     | all job control threads have been joined
[2025-04-19 02:57:27] 2025-04-19 06:57:11,779 | INFO     | [job] queue monitor thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:11,783 | INFO     | [job] retrieve thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:11,819 | INFO     | [payload] failed_post thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:12,135 | INFO     | all payload control threads have been joined
[2025-04-19 02:57:27] 2025-04-19 06:57:12,180 | INFO     | [job] job monitor thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:12,209 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:12,303 | INFO     | [job] validate thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:12,558 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:12,564 | INFO     | [data] control thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:12,712 | INFO     | [job] control thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:12,901 | INFO     | [payload] validate_post thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:13,058 | INFO     | [data] copytool_in thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:13,060 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:13,140 | INFO     | [payload] control thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:13,155 | INFO     | [data] copytool_out thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:13,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 02:57:27] 2025-04-19 06:57:17,740 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:21,421 | INFO     | job.realtimelogging is not enabled
[2025-04-19 02:57:27] 2025-04-19 06:57:22,426 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 02:57:27] 2025-04-19 06:57:22,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008404473664)>', '<ExcThread(monitor, started 140007637493504)>']
[2025-04-19 02:57:27] 2025-04-19 06:57:22,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 02:57:27] 2025-04-19 06:57:22,837 | INFO     | [monitor] control thread has ended
[2025-04-19 02:57:27] 2025-04-19 06:57:27,591 | INFO     | all workflow threads have been joined
[2025-04-19 02:57:27] 2025-04-19 06:57:27,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 02:57:27] 2025-04-19 06:57:27,592 | INFO     | traces error code: 0
[2025-04-19 02:57:27] 2025-04-19 06:57:27,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 02:57:27] 2025-04-19 06:57:27,691 [wrapper] ==== pilot stdout END ====
[2025-04-19 02:57:27] 2025-04-19 06:57:27,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 02:57:27] 2025-04-19 06:57:27,698 [wrapper] pilotpid: 13815
[2025-04-19 02:57:27] 2025-04-19 06:57:27,702 [wrapper] Pilot exit status: 0
[2025-04-19 02:57:27] 2025-04-19 06:57:27,717 [wrapper] pandaids: 6606652414
[2025-04-19 02:57:27] 2025-04-19 06:57:27,757 [wrapper] cleanup supervisor_pilot 31296 13816
[2025-04-19 02:57:27] 2025-04-19 06:57:27,761 [wrapper] Test setup, not cleaning
[2025-04-19 02:57:27] 2025-04-19 06:57:27,765 [wrapper] apfmon messages muted
[2025-04-19 02:57:27] 2025-04-19 06:57:27,769 [wrapper] ==== wrapper stdout END ====
[2025-04-19 02:57:27] 2025-04-19 06:57:27,772 [wrapper] ==== wrapper stderr END ====
[2025-04-19 02:57:27]  *** Error codes and diagnostics ***
[2025-04-19 02:57:27]     "exeErrorCode": 0,
[2025-04-19 02:57:27]     "exeErrorDiag": "",
[2025-04-19 02:57:27]     "pilotErrorCode": 0,
[2025-04-19 02:57:27]     "pilotErrorDiag": "",
[2025-04-19 02:57:27]  *** Listing of results directory ***
[2025-04-19 02:57:27] total 413312
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 11:45 pilot3.tar.gz
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 12:03 queuedata.json
[2025-04-19 02:57:27] -rwx------ 1 boincer umatlas     37140 Apr 18 12:04 runpilot2-wrapper.sh
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas       100 Apr 19 01:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 02:57:27] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 01:34 run_atlas
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas       105 Apr 19 01:34 job.xml
[2025-04-19 02:57:27] -rw-r--r-- 2 boincer umatlas 225090705 Apr 19 01:34 EVNT.44075481._002766.pool.root.1
[2025-04-19 02:57:27] drwxrwx--x 2 boincer umatlas      4096 Apr 19 01:34 shared
[2025-04-19 02:57:27] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 01:34 input.tar.gz
[2025-04-19 02:57:27] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 01:34 start_atlas.sh
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas         0 Apr 19 01:34 boinc_lockfile
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 01:34 pandaJob.out
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas       424 Apr 19 01:34 setup.sh.local
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas    991292 Apr 19 01:34 agis_schedconf.cvmfs.json
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas   1618536 Apr 19 01:35 agis_ddmendpoints.agis.ALL.json
[2025-04-19 02:57:27] drwx------ 4 boincer umatlas      4096 Apr 19 01:35 pilot3
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas      5868 Apr 19 02:54 init_data.xml
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas 192579231 Apr 19 02:56 HITS.44075483._071228.pool.root.1
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas       530 Apr 19 02:56 boinc_task_state.xml
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas      1049 Apr 19 02:57 memory_monitor_summary.json
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas        95 Apr 19 02:57 pilot_heartbeat.json
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas    377598 Apr 19 02:57 log.44075483._071228.job.log.tgz.1
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas      7756 Apr 19 02:57 heartbeat.json
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 02:57 boinc_mmap_file
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas        27 Apr 19 02:57 wrapper_checkpoint.txt
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas      4734 Apr 19 02:57 pilotlog.txt
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas    469811 Apr 19 02:57 log.44075483._071228.job.log.1
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas       357 Apr 19 02:57 output.list
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas       620 Apr 19 02:57 runtime_log
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas    870400 Apr 19 02:57 result.tar.gz
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas       658 Apr 19 02:57 yWwLDm3N3P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmEffLDmTQVhMo.diag
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 02:57 runtime_log.err
[2025-04-19 02:57:27] -rw-r--r-- 1 boincer umatlas     21441 Apr 19 02:57 stderr.txt
[2025-04-19 02:57:27] HITS file was successfully produced:
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas 192579231 Apr 19 02:56 shared/HITS.pool.root.1
[2025-04-19 02:57:27]  *** Contents of shared directory: ***
[2025-04-19 02:57:27] total 409256
[2025-04-19 02:57:27] -rw-r--r-- 2 boincer umatlas 225090705 Apr 19 01:34 ATLAS.root_0
[2025-04-19 02:57:27] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 01:34 input.tar.gz
[2025-04-19 02:57:27] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 01:34 start_atlas.sh
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas 192579231 Apr 19 02:56 HITS.pool.root.1
[2025-04-19 02:57:27] -rw------- 1 boincer umatlas    870400 Apr 19 02:57 result.tar.gz
02:57:29 (9298): run_atlas exited; CPU time 46084.162488
02:57:29 (9298): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN