Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:07:35 (1327365): wrapper (7.7.26015): starting
18:07:35 (1327365): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 18:07:35] Arguments: --nthreads 3
[2025-04-19 18:07:35] Threads: 3
[2025-04-19 18:07:35] Checking for CVMFS
[2025-04-19 18:07:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 18:07:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 18:07:35] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 18:07:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 18:07:35] 2.9.2.0 2911 4693 82532 145043 0 56 26356536 36864001 0 130560 0 3443942 99.991 1175330 14157 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 18:07:35] CVMFS is ok
[2025-04-19 18:07:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 18:07:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 18:07:35] Further information can be found at the LHC@home message board.
[2025-04-19 18:07:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 18:07:35] Checking for apptainer binary...
[2025-04-19 18:07:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 18:07:35] Running /usr/bin/apptainer --version
[2025-04-19 18:07:35] apptainer version 1.3.6-6.1
[2025-04-19 18:07:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 18:07:35] magicA161
[2025-04-19 18:07:35] apptainer works
[2025-04-19 18:07:35] Set ATHENA_PROC_NUMBER=3
[2025-04-19 18:07:35] Set ATHENA_CORE_NUMBER=3
[2025-04-19 18:07:35] Starting ATLAS job with PandaID=6607182971
[2025-04-19 18:07:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 19:36:32]  *** The last 200 lines of the pilot log: ***
[2025-04-19 19:36:32]  filetype=log
[2025-04-19 19:36:32]  guid=d3e8d5f1-6000-480f-ae53-013ea9c6506e
[2025-04-19 19:36:32]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 19:36:32]  is_altstaged=None
[2025-04-19 19:36:32]  is_tar=False
[2025-04-19 19:36:32]  lfn=log.44075483._076460.job.log.tgz.1
[2025-04-19 19:36:32]  mtime=0
[2025-04-19 19:36:32]  protocol_id=None
[2025-04-19 19:36:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 19:36:32]  replicas=None
[2025-04-19 19:36:32]  scope=mc23_13p6TeV
[2025-04-19 19:36:32]  status=None
[2025-04-19 19:36:32]  status_code=0
[2025-04-19 19:36:32]  storage_token=
[2025-04-19 19:36:32]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6607182971/log.44075483._076460.job.log.tgz.1
[2025-04-19 19:36:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/fc/log.44075483._076460.job.log.tgz.1
[2025-04-19 19:36:32]  workdir=None
[2025-04-19 19:36:32] ]
[2025-04-19 19:36:32] 2025-04-19 17:36:10,637 | INFO     | transferring file log.44075483._076460.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6607182971/log.44075483._076460.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 19:36:32] 2025-04-19 17:36:10,637 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6607182971/log.44075483._076460.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0764
[2025-04-19 19:36:32] 2025-04-19 17:36:10,650 | INFO     | adding to output.list: log.44075483._076460.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/fc/log.44075483._076460.job.log.tg
[2025-04-19 19:36:32] 2025-04-19 17:36:10,651 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 19:36:32] 2025-04-19 17:36:10,651 | INFO     | summary of transferred files:
[2025-04-19 19:36:32] 2025-04-19 17:36:10,651 | INFO     |  -- lfn=log.44075483._076460.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 19:36:32] 2025-04-19 17:36:10,651 | INFO     | stage-out finished correctly
[2025-04-19 19:36:32] 2025-04-19 17:36:12,058 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 19:36:32] 2025-04-19 17:36:12,211 | INFO     | monitor loop #409: job 0:6607182971 is in state 'finished'
[2025-04-19 19:36:32] 2025-04-19 17:36:12,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:36:32] 2025-04-19 17:36:14,203 | INFO     | job 6607182971 has state=finished
[2025-04-19 19:36:32] 2025-04-19 17:36:14,203 | INFO     | preparing for final server update for job 6607182971 in state='finished'
[2025-04-19 19:36:32] 2025-04-19 17:36:14,204 | INFO     | this job has now completed (state=finished)
[2025-04-19 19:36:32] 2025-04-19 17:36:14,204 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 19:36:32] 2025-04-19 17:36:14,204 | INFO     | log transfer has been attempted: DONE
[2025-04-19 19:36:32] 2025-04-19 17:36:14,204 | INFO     | job 6607182971 has finished - writing final server update
[2025-04-19 19:36:32] 2025-04-19 17:36:14,204 | INFO     | total number of processed events: 400 (read)
[2025-04-19 19:36:32] 2025-04-19 17:36:14,205 | INFO     | executing command: lscpu
[2025-04-19 19:36:32] 2025-04-19 17:36:14,223 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 19:36:32] 2025-04-19 17:36:14,713 | INFO     | monitor loop #410: job 0:6607182971 is in state 'finished'
[2025-04-19 19:36:32] 2025-04-19 17:36:14,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:36:32] 2025-04-19 17:36:17,216 | INFO     | monitor loop #411: job 0:6607182971 is in state 'finished'
[2025-04-19 19:36:32] 2025-04-19 17:36:17,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:36:32] 2025-04-19 17:36:18,118 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 19:36:32] 2025-04-19 17:36:18,118 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607182971/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 19:36:32] 2025-04-19 17:36:18,118 | INFO     | extracted standard info from prmon json
[2025-04-19 19:36:32] 2025-04-19 17:36:18,118 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 19:36:32] 2025-04-19 17:36:18,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 19:36:32] 2025-04-19 17:36:18,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 19:36:32] 2025-04-19 17:36:18,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 19:36:32] 2025-04-19 17:36:18,119 | INFO     | fitting pss+swap vs Time
[2025-04-19 19:36:32] 2025-04-19 17:36:18,119 | INFO     | sum of square deviations: 158737860.0
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | sum of deviations: 13537058176.500002
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | mean x: 1745081594.5
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | mean y: 2286453.7625
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | -- intersect: -148817100852.36526
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | intersect: -148817100852.36526
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | chi2: 1.037716776401103
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | -- intersect: -148817100852.36526
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | current memory leak: 85.28 B/s (using 80 data points, chi2=1.04)
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | ..............................
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | . Timing measurements:
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | . get job = 0 s
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | . initial setup = 1 s
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | . payload setup = 3 s
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | . stage-in = 0 s
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | . payload execution = 5288 s
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | . stage-out = 0 s
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | . log creation = 0 s
[2025-04-19 19:36:32] 2025-04-19 17:36:18,120 | INFO     | ..............................
[2025-04-19 19:36:32] 2025-04-19 17:36:18,151 | INFO     | 
[2025-04-19 19:36:32] 2025-04-19 17:36:18,151 | INFO     | job summary report
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | --------------------------------------------------
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | PanDA job id: 6607182971
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | task id: 44075483
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | errors: (none)
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | pilot state: finished 
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | transexitcode: 0
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | exeerrorcode: 0
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | exeerrordiag: 
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | exitcode: 0
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | exitmsg: OK
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | cpuconsumptiontime: 14017 s
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | nevents: 400
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | neventsw: 0
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | pid: 1337449
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | pgrp: 1337449
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | corecount: 3
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | event service: False
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | sizes: {0: 2426774, 2: 2426980, 10: 2427008, 5295: 2453555, 5296: 2462502, 5298: 2462558, 5304: 2462856}
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | --------------------------------------------------
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | 
[2025-04-19 19:36:32] 2025-04-19 17:36:18,152 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 19:36:32] 2025-04-19 17:36:18,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | job 6607182971 has completed (purged errors)
[2025-04-19 19:36:32] 2025-04-19 17:36:18,165 | INFO     | overall cleanup function is called
[2025-04-19 19:36:32] 2025-04-19 17:36:19,172 | INFO     | --- collectZombieJob: --- 10, [1337449]
[2025-04-19 19:36:32] 2025-04-19 17:36:19,172 | INFO     | zombie collector waiting for pid 1337449
[2025-04-19 19:36:32] 2025-04-19 17:36:19,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 19:36:32] 2025-04-19 17:36:19,172 | INFO     | collected zombie processes
[2025-04-19 19:36:32] 2025-04-19 17:36:19,172 | INFO     | will attempt to kill all subprocesses of pid=1337449
[2025-04-19 19:36:32] 2025-04-19 17:36:19,213 | INFO     | process IDs to be killed: [1337449] (in reverse order)
[2025-04-19 19:36:32] 2025-04-19 17:36:19,238 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 19:36:32] 2025-04-19 17:36:19,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 19:36:32] 2025-04-19 17:36:19,239 | INFO     | did not find any defunct processes belonging to 1337449
[2025-04-19 19:36:32] 2025-04-19 17:36:19,240 | INFO     | did not find any defunct processes belonging to 1337449
[2025-04-19 19:36:32] 2025-04-19 17:36:19,240 | INFO     | ready for new job
[2025-04-19 19:36:32] 2025-04-19 17:36:19,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 19:36:32] 2025-04-19 17:36:19,241 | INFO     | **************************************
[2025-04-19 19:36:32] 2025-04-19 17:36:19,241 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 19:36:32] 2025-04-19 17:36:19,241 | INFO     | **************************************
[2025-04-19 19:36:32] 2025-04-19 17:36:19,241 | INFO     | 
[2025-04-19 19:36:32] 2025-04-19 17:36:19,241 | INFO     | architecture information:
[2025-04-19 19:36:32] 2025-04-19 17:36:19,241 | INFO     | executing command: cat /etc/os-release
[2025-04-19 19:36:32] 2025-04-19 17:36:19,250 | INFO     | cat /etc/os-release:
[2025-04-19 19:36:32] NAME="CentOS Linux"
[2025-04-19 19:36:32] VERSION="7 (Core)"
[2025-04-19 19:36:32] ID="centos"
[2025-04-19 19:36:32] ID_LIKE="rhel fedora"
[2025-04-19 19:36:32] VERSION_ID="7"
[2025-04-19 19:36:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 19:36:32] ANSI_COLOR="0;31"
[2025-04-19 19:36:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 19:36:32] HOME_URL="https://www.centos.org/"
[2025-04-19 19:36:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 19:36:32] 
[2025-04-19 19:36:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 19:36:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 19:36:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 19:36:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 19:36:32] 
[2025-04-19 19:36:32] 2025-04-19 17:36:19,250 | INFO     | **************************************
[2025-04-19 19:36:32] 2025-04-19 17:36:19,753 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 19:36:32] 2025-04-19 17:36:19,766 | INFO     | sufficient remaining disk space (373823635456 B)
[2025-04-19 19:36:32] 2025-04-19 17:36:19,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 19:36:32] 2025-04-19 17:36:19,767 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 19:36:32] 2025-04-19 17:36:19,767 | INFO     | update_server=False
[2025-04-19 19:36:32] 2025-04-19 17:36:19,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 19:36:32] 2025-04-19 17:36:19,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 19:36:32] 2025-04-19 17:36:20,056 | INFO     | all payload control threads have been joined
[2025-04-19 19:36:32] 2025-04-19 17:36:20,367 | INFO     | all job control threads have been joined
[2025-04-19 19:36:32] 2025-04-19 17:36:20,467 | INFO     | all data control threads have been joined
[2025-04-19 19:36:32] 2025-04-19 17:36:20,660 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 19:36:32] 2025-04-19 17:36:20,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 19:36:32] 2025-04-19 17:36:20,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 19:36:32] 2025-04-19 17:36:20,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 19:36:32] 2025-04-19 17:36:20,726 | INFO     | aborting loop
[2025-04-19 19:36:32] 2025-04-19 17:36:20,773 | INFO     | [job] queue monitor thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:20,773 | INFO     | [job] retrieve thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:20,893 | INFO     | [payload] failed_post thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,062 | INFO     | [payload] control thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,144 | INFO     | [data] copytool_in thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 19:36:32] 2025-04-19 17:36:21,373 | INFO     | [job] control thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,434 | INFO     | [payload] validate_post thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,473 | INFO     | [data] control thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,529 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,531 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,531 | INFO     | [job] validate thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,731 | INFO     | [job] job monitor thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:21,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:22,034 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:22,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 19:36:32] 2025-04-19 17:36:23,204 | INFO     | [data] copytool_out thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:26,609 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 19:36:32] 2025-04-19 17:36:27,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713529530176)>', '<ExcThread(monitor, started 139713172190976)>']
[2025-04-19 19:36:32] 2025-04-19 17:36:28,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 19:36:32] 2025-04-19 17:36:28,704 | INFO     | [monitor] control thread has ended
[2025-04-19 19:36:32] 2025-04-19 17:36:32,817 | INFO     | all workflow threads have been joined
[2025-04-19 19:36:32] 2025-04-19 17:36:32,817 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 19:36:32] 2025-04-19 17:36:32,817 | INFO     | traces error code: 0
[2025-04-19 19:36:32] 2025-04-19 17:36:32,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 19:36:32] 2025-04-19 17:36:32,868 [wrapper] ==== pilot stdout END ====
[2025-04-19 19:36:32] 2025-04-19 17:36:32,870 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 19:36:32] 2025-04-19 17:36:32,873 [wrapper] pilotpid: 1331015
[2025-04-19 19:36:32] 2025-04-19 17:36:32,875 [wrapper] Pilot exit status: 0
[2025-04-19 19:36:32] 2025-04-19 17:36:32,883 [wrapper] pandaids: 6607182971
[2025-04-19 19:36:32] 2025-04-19 17:36:32,900 [wrapper] cleanup supervisor_pilot 1349412 1331016
[2025-04-19 19:36:32] 2025-04-19 17:36:32,902 [wrapper] Test setup, not cleaning
[2025-04-19 19:36:32] 2025-04-19 17:36:32,905 [wrapper] apfmon messages muted
[2025-04-19 19:36:32] 2025-04-19 17:36:32,907 [wrapper] ==== wrapper stdout END ====
[2025-04-19 19:36:32] 2025-04-19 17:36:32,910 [wrapper] ==== wrapper stderr END ====
[2025-04-19 19:36:32]  *** Error codes and diagnostics ***
[2025-04-19 19:36:32]     "exeErrorCode": 0,
[2025-04-19 19:36:32]     "exeErrorDiag": "",
[2025-04-19 19:36:32]     "pilotErrorCode": 0,
[2025-04-19 19:36:32]     "pilotErrorDiag": "",
[2025-04-19 19:36:32]  *** Listing of results directory ***
[2025-04-19 19:36:32] total 419036
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc    495897 Apr 19 04:23 pilot3.tar.gz
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc      5111 Apr 19 04:29 queuedata.json
[2025-04-19 19:36:32] -rwx------ 1 boinc boinc     37140 Apr 19 04:30 runpilot2-wrapper.sh
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc       100 Apr 19 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 19:36:32] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 18:07 run_atlas
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc       105 Apr 19 18:07 job.xml
[2025-04-19 19:36:32] -rw-r--r-- 2 boinc boinc 225497128 Apr 19 18:07 EVNT.44075481._002968.pool.root.1
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc      6932 Apr 19 18:07 init_data.xml
[2025-04-19 19:36:32] drwxrwx--x 2 boinc boinc      4096 Apr 19 18:07 shared
[2025-04-19 19:36:32] -rw-r--r-- 2 boinc boinc    508891 Apr 19 18:07 input.tar.gz
[2025-04-19 19:36:32] -rw-r--r-- 2 boinc boinc     17569 Apr 19 18:07 start_atlas.sh
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc         0 Apr 19 18:07 boinc_lockfile
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc      2577 Apr 19 18:07 pandaJob.out
[2025-04-19 19:36:32] -rw------- 1 boinc boinc       424 Apr 19 18:07 setup.sh.local
[2025-04-19 19:36:32] -rw------- 1 boinc boinc    991300 Apr 19 18:07 agis_schedconf.cvmfs.json
[2025-04-19 19:36:32] -rw------- 1 boinc boinc   1618536 Apr 19 18:07 agis_ddmendpoints.agis.ALL.json
[2025-04-19 19:36:32] drwx------ 4 boinc boinc      4096 Apr 19 18:07 pilot3
[2025-04-19 19:36:32] -rw------- 1 boinc boinc 198260160 Apr 19 19:35 HITS.44075483._076460.pool.root.1
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc       529 Apr 19 19:35 boinc_task_state.xml
[2025-04-19 19:36:32] -rw------- 1 boinc boinc      1017 Apr 19 19:36 memory_monitor_summary.json
[2025-04-19 19:36:32] -rw------- 1 boinc boinc        95 Apr 19 19:36 pilot_heartbeat.json
[2025-04-19 19:36:32] -rw------- 1 boinc boinc    218404 Apr 19 19:36 log.44075483._076460.job.log.tgz.1
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc      8192 Apr 19 19:36 boinc_mmap_file
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc        27 Apr 19 19:36 wrapper_checkpoint.txt
[2025-04-19 19:36:32] -rw------- 1 boinc boinc      7651 Apr 19 19:36 heartbeat.json
[2025-04-19 19:36:32] -rw------- 1 boinc boinc      4357 Apr 19 19:36 pilotlog.txt
[2025-04-19 19:36:32] -rw------- 1 boinc boinc    513541 Apr 19 19:36 log.44075483._076460.job.log.1
[2025-04-19 19:36:32] -rw------- 1 boinc boinc       357 Apr 19 19:36 output.list
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc       620 Apr 19 19:36 runtime_log
[2025-04-19 19:36:32] -rw------- 1 boinc boinc    747520 Apr 19 19:36 result.tar.gz
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc     11114 Apr 19 19:36 runtime_log.err
[2025-04-19 19:36:32] -rw------- 1 boinc boinc       661 Apr 19 19:36 gjQMDmf9CQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9kgLDmt9NLIo.diag
[2025-04-19 19:36:32] -rw-r--r-- 1 boinc boinc     21207 Apr 19 19:36 stderr.txt
[2025-04-19 19:36:32] HITS file was successfully produced:
[2025-04-19 19:36:32] -rw------- 1 boinc boinc 198260160 Apr 19 19:35 shared/HITS.pool.root.1
[2025-04-19 19:36:32]  *** Contents of shared directory: ***
[2025-04-19 19:36:32] total 415092
[2025-04-19 19:36:32] -rw-r--r-- 2 boinc boinc 225497128 Apr 19 18:07 ATLAS.root_0
[2025-04-19 19:36:32] -rw-r--r-- 2 boinc boinc    508891 Apr 19 18:07 input.tar.gz
[2025-04-19 19:36:32] -rw-r--r-- 2 boinc boinc     17569 Apr 19 18:07 start_atlas.sh
[2025-04-19 19:36:32] -rw------- 1 boinc boinc 198260160 Apr 19 19:35 HITS.pool.root.1
[2025-04-19 19:36:32] -rw------- 1 boinc boinc    747520 Apr 19 19:36 result.tar.gz
19:36:34 (1327365): run_atlas exited; CPU time 14034.895774
19:36:34 (1327365): called boinc_finish(0)

</stderr_txt>
]]>

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