Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 07:14:37 (5200): Detected: vboxwrapper 26206
2025-04-19 07:14:38 (5200): Detected: BOINC client v7.24.1
2025-04-19 07:14:38 (5200): Detected: VirtualBox VboxManage Interface (Version: 6.0.24)
2025-04-19 07:14:38 (5200): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 07:14:39 (5200): Create VM. (boinc_792e405368c02ecb, slot#2)
2025-04-19 07:14:39 (5200): Setting Memory Size for VM. (4100MB)
2025-04-19 07:14:40 (5200): Setting CPU Count for VM. (1)
2025-04-19 07:14:40 (5200): Setting Chipset Options for VM.
2025-04-19 07:14:40 (5200): Setting Graphics Controller Options for VM.
2025-04-19 07:14:40 (5200): Setting Boot Options for VM.
2025-04-19 07:14:41 (5200): Setting Network Configuration for NAT.
2025-04-19 07:14:41 (5200): Enabling VM Network Access.
2025-04-19 07:14:41 (5200): Disabling USB Support for VM.
2025-04-19 07:14:41 (5200): Disabling COM Port Support for VM.
2025-04-19 07:14:42 (5200): Disabling LPT Port Support for VM.
2025-04-19 07:14:42 (5200): Disabling Audio Support for VM.
2025-04-19 07:14:42 (5200): Disabling Clipboard Support for VM.
2025-04-19 07:14:43 (5200): Disabling Drag and Drop Support for VM.
2025-04-19 07:14:43 (5200): Adding storage controller(s) to VM.
2025-04-19 07:14:43 (5200): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 07:14:44 (5200): Adding VirtualBox Guest Additions to VM.
2025-04-19 07:14:44 (5200): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 07:14:44 (5200): forwarding host port 49300 to guest port 80
2025-04-19 07:14:44 (5200): Enabling remote desktop for VM.
2025-04-19 07:14:45 (5200): Required extension pack not installed, remote desktop not enabled.
2025-04-19 07:14:45 (5200): Enabling shared directory for VM.
2025-04-19 07:14:45 (5200): Starting VM using VBoxManage interface. (boinc_792e405368c02ecb, slot#2)
2025-04-19 07:14:50 (5200): Successfully started VM. (PID = '5728')
2025-04-19 07:14:50 (5200): Reporting VM Process ID to BOINC.
2025-04-19 07:14:50 (5200): Guest Log: BIOS: VirtualBox 6.0.24
2025-04-19 07:14:50 (5200): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 07:14:50 (5200): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 07:14:50 (5200): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 07:14:50 (5200): Detected: Web Application Enabled (http://localhost:49300)
2025-04-19 07:14:50 (5200): Preference change detected
2025-04-19 07:14:50 (5200): Setting CPU throttle for VM. (95%)
2025-04-19 07:14:50 (5200): Setting network throttle for VM. (2KB)
2025-04-19 07:14:51 (5200): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 480 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 07:14:52 (5200): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 07:14:52 (5200): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 07:14:55 (5200): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 07:14:55 (5200): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 07:14:55 (5200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 07:14:59 (5200): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 07:14:59 (5200): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 07:15:08 (5200): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 07:15:08 (5200): Guest Log: 00:00:00.000152 main     Log opened 2025-04-19T07:15:06.984258000Z
2025-04-19 07:15:08 (5200): Guest Log: 00:00:00.000252 main     OS Product: Linux
2025-04-19 07:15:08 (5200): Guest Log: 00:00:00.000283 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 07:15:08 (5200): Guest Log: 00:00:00.000314 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 07:15:08 (5200): Guest Log: 00:00:00.000343 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 07:15:08 (5200): Guest Log: 00:00:00.000344 main     Process ID: 1247
2025-04-19 07:15:08 (5200): Guest Log: 00:00:00.000344 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 07:15:08 (5200): Guest Log: 00:00:00.001582 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 07:15:09 (5200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 07:15:09 (5200): Guest Log: [INFO] Mounting shared directory
2025-04-19 07:15:09 (5200): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 07:15:19 (5200): Guest Log: 00:00:10.019509 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 475 699 000ns (GuestNow=1 745 039 718 527 411 000 ns GuestLast=1 745 046 907 003 110 000 ns fSetTimeLastLoop=true )
2025-04-19 07:16:58 (5200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 07:16:58 (5200): Guest Log: [INFO] Detected branch: prod
2025-04-19 07:16:59 (5200): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 07:16:59 (5200): Guest Log: Copying input files
2025-04-19 07:17:00 (5200): Guest Log: Copied input files into RunAtlas.
2025-04-19 07:17:00 (5200): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 07:17:00 (5200): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 07:17:00 (5200): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 07:17:00 (5200): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 07:18:52 (5200): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 07:18:52 (5200): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 07:18:52 (5200): Guest Log: 2.6.3.0 1540 2 30092 145027 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 07:18:53 (5200): Guest Log: copied the webapp to /var/www
2025-04-19 07:18:53 (5200): Guest Log: core_number=1
2025-04-19 07:18:53 (5200): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 07:18:53 (5200): Guest Log:  *** Starting ATLAS job. (PandaID=6606857634 taskID=44179737) ***
2025-04-19 07:24:44 (5200): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 07:25:04 (5200): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 07:25:14 (5200): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 07:25:34 (5200): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 07:25:44 (5200): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 07:26:04 (5200): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 07:26:14 (5200): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 07:26:34 (5200): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 07:29:04 (5200): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 07:29:24 (5200): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 07:30:17 (5200): Guest Log:  *** Job finished ***
2025-04-19 07:30:17 (5200): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:30,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:31,665 | INFO     | [job] queue monitor thread has finished
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:32,121 | INFO     | [data] queue_monitor thread has finished
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:32,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140158043514688)>', '<ExcThread(monitor, started 140157458048768)>']
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:32,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:32,452 | INFO     | [monitor] control thread has ended
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,250 | INFO     | all workflow threads have been joined
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,251 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,251 | INFO     | traces error code: 0
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,372 [wrapper] ==== pilot stdout END ====
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,376 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,381 [wrapper] pilotpid: 5888
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,385 [wrapper] Pilot exit status: 0
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,484 [wrapper] pandaids: 6606857634
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,507 [wrapper] cleanup supervisor_pilot  5894 5889
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,511 [wrapper] Test setup, not cleaning
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,516 [wrapper] apfmon messages muted
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,520 [wrapper] ==== wrapper stdout END ====
2025-04-19 07:30:17 (5200): Guest Log: 2025-04-19 05:28:37,525 [wrapper] ==== wrapper stderr END ====
2025-04-19 07:30:17 (5200): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 07:30:17 (5200): Guest Log:     "exeErrorCode": 0,
2025-04-19 07:30:17 (5200): Guest Log:     "exeErrorDiag": "",
2025-04-19 07:30:17 (5200): Guest Log:     "pilotErrorCode": 1305,
2025-04-19 07:30:17 (5200): Guest Log:     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
2025-04-19 07:30:17 (5200): Guest Log:  *** Listing of results directory ***
2025-04-19 07:30:17 (5200): Guest Log: total 3864
2025-04-19 07:30:17 (5200): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 18 19:39 pilot3.tar.gz
2025-04-19 07:30:17 (5200): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 18 20:00 queuedata.json
2025-04-19 07:30:17 (5200): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 18 20:03 runpilot2-wrapper.sh
2025-04-19 07:30:17 (5200): Guest Log: -rwxr-xr-x. 1 atlas atlas    8926 Apr 19 05:16 init_data.xml
2025-04-19 07:30:17 (5200): Guest Log: -rwxr-xr-x. 1 atlas atlas  508856 Apr 19 05:16 input.tar.gz
2025-04-19 07:30:17 (5200): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 19 05:16 start_atlas.sh
2025-04-19 07:30:17 (5200): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 19 05:17 EVNT.44179733._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 07:30:17 (5200): Guest Log: -rw-r--r--. 1 atlas atlas    2517 Apr 19 05:18 pandaJob.out
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas     424 Apr 19 05:19 setup.sh.local
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas  991292 Apr 19 05:24 agis_schedconf.cvmfs.json
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 19 05:24 agis_ddmendpoints.agis.ALL.json
2025-04-19 07:30:17 (5200): Guest Log: drwx------. 4 atlas atlas    4096 Apr 19 05:24 pilot3
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas     273 Apr 19 05:26 memory_monitor_summary.json
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas    8077 Apr 19 05:26 log.44179737._000005.job.log.tgz.1
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas      95 Apr 19 05:28 pilot_heartbeat.json
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas    2210 Apr 19 05:28 heartbeat.json
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 19 05:28 pilotlog.txt
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas   76709 Apr 19 05:28 log.44179737._000005.job.log.1
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas     188 Apr 19 05:28 output.list
2025-04-19 07:30:17 (5200): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 19 05:28 runtime_log
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas  102400 Apr 19 05:28 result.tar.gz
2025-04-19 07:30:17 (5200): Guest Log: -rw-------. 1 atlas atlas     644 Apr 19 05:28 ShYMDmw66P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmBY5KDm2pohTm.diag
2025-04-19 07:30:17 (5200): Guest Log: -rw-r--r--. 1 atlas atlas   10676 Apr 19 05:28 runtime_log.err
2025-04-19 07:30:17 (5200): Guest Log: Looking for outputfile HITS.44179737._000005.pool.root.1
2025-04-19 07:30:17 (5200): Guest Log: No HITS file was produced
2025-04-19 07:30:17 (5200): Guest Log: Successfully finished the ATLAS job!
2025-04-19 07:30:17 (5200): Guest Log: Copying the results back to the shared directory!
2025-04-19 07:30:17 (5200): Guest Log:  *** Contents of shared directory: ***
2025-04-19 07:30:17 (5200): Guest Log: total 197740
2025-04-19 07:30:17 (5200): Guest Log: -rwxrwxrwx. 1 root root 201838520 Apr 19 05:14 ATLAS.root_0
2025-04-19 07:30:17 (5200): Guest Log: -rwxrwxrwx. 1 root root      8926 Apr 19 05:14 init_data.xml
2025-04-19 07:30:17 (5200): Guest Log: -rwxrwxrwx. 1 root root    508856 Apr 19 05:13 input.tar.gz
2025-04-19 07:30:17 (5200): Guest Log: -rwxrwxrwx. 1 root root    102400 Apr 19  2025 result.tar.gz
2025-04-19 07:30:17 (5200): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 19 05:13 start_atlas.sh
2025-04-19 07:30:17 (5200): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 07:30:17 (5200): VM Completion File Detected.
2025-04-19 07:30:17 (5200): Powering off VM.
2025-04-19 07:30:18 (5200): Successfully stopped VM.
2025-04-19 07:30:18 (5200): Deregistering VM. (boinc_792e405368c02ecb, slot#2)
2025-04-19 07:30:18 (5200): Removing network bandwidth throttle group from VM.
2025-04-19 07:30:18 (5200): Removing VM from VirtualBox.
07:30:23 (5200): called boinc_finish(0)

</stderr_txt>
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