Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:09:28 (2738828): wrapper (7.7.26015): starting
01:09:28 (2738828): wrapper: running run_atlas (--nthreads 9)
[2025-04-19 01:09:28] Arguments: --nthreads 9
[2025-04-19 01:09:28] Threads: 9
[2025-04-19 01:09:28] Checking for CVMFS
[2025-04-19 01:09:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 01:09:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 01:09:28] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 01:09:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 01:09:29] 2.12.6.0 3751696 38103 210672 145026 2 423 21614085 32935936 13617 130560 0 58949353 99.492 88148676 30776 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 01:09:29] CVMFS is ok
[2025-04-19 01:09:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 01:09:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 01:09:29] Further information can be found at the LHC@home message board.
[2025-04-19 01:09:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 01:09:29] Checking for apptainer binary...
[2025-04-19 01:09:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 01:09:29] Running /usr/bin/apptainer --version
[2025-04-19 01:09:29] apptainer version 1.4.0-1.el9
[2025-04-19 01:09:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 01:09:29] c6-5-37-2.aglt2.org
[2025-04-19 01:09:29] apptainer works
[2025-04-19 01:09:29] Set ATHENA_PROC_NUMBER=9
[2025-04-19 01:09:29] Set ATHENA_CORE_NUMBER=9
[2025-04-19 01:09:29] Starting ATLAS job with PandaID=6607182324
[2025-04-19 01:09:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 04:25:02]  *** The last 200 lines of the pilot log: ***
[2025-04-19 04:25:02] 2025-04-19 08:24:47,853 | INFO     | -- intersect: -95840928910.4774
[2025-04-19 04:25:02] 2025-04-19 08:24:47,853 | INFO     | intersect: -95840928910.4774
[2025-04-19 04:25:02] 2025-04-19 08:24:47,853 | INFO     | chi2: 5.955822483209877
[2025-04-19 04:25:02] 2025-04-19 08:24:47,853 | INFO     | current chi2=5.955822483209877 (change=0.2611014014338885 %)
[2025-04-19 04:25:02] 2025-04-19 08:24:47,853 | INFO     | right removable region: 185
[2025-04-19 04:25:02] 2025-04-19 08:24:47,854 | INFO     | sum of square deviations: 1995436922.2365654
[2025-04-19 04:25:02] 2025-04-19 08:24:47,858 | INFO     | sum of deviations: 63300100039.6882
[2025-04-19 04:25:02] 2025-04-19 08:24:47,858 | INFO     | mean x: 1745045363.795699
[2025-04-19 04:25:02] 2025-04-19 08:24:47,858 | INFO     | mean y: 2284208.860215054
[2025-04-19 04:25:02] 2025-04-19 08:24:47,858 | INFO     | -- intersect: -55354788155.147224
[2025-04-19 04:25:02] 2025-04-19 08:24:47,858 | INFO     | intersect: -55354788155.147224
[2025-04-19 04:25:02] 2025-04-19 08:24:47,858 | INFO     | chi2: 2.9178498033539455
[2025-04-19 04:25:02] 2025-04-19 08:24:47,859 | INFO     | current chi2=2.9178498033539455 (change=51.13636672634356 %)
[2025-04-19 04:25:02] 2025-04-19 08:24:47,859 | INFO     | sum of square deviations: 1838793954.2872949
[2025-04-19 04:25:02] 2025-04-19 08:24:47,860 | INFO     | sum of deviations: 25342126864.6022
[2025-04-19 04:25:02] 2025-04-19 08:24:47,860 | INFO     | mean x: 1745045516.3038673
[2025-04-19 04:25:02] 2025-04-19 08:24:47,860 | INFO     | mean y: 2321187.425414365
[2025-04-19 04:25:02] 2025-04-19 08:24:47,860 | INFO     | -- intersect: -24047771404.823986
[2025-04-19 04:25:02] 2025-04-19 08:24:47,860 | INFO     | intersect: -24047771404.823986
[2025-04-19 04:25:02] 2025-04-19 08:24:47,860 | INFO     | chi2: 1.1199688220502741
[2025-04-19 04:25:02] 2025-04-19 08:24:47,861 | INFO     | current chi2=1.1199688220502741 (change=61.61663904828421 %)
[2025-04-19 04:25:02] 2025-04-19 08:24:47,861 | INFO     | sum of square deviations: 1690580545.4318173
[2025-04-19 04:25:02] 2025-04-19 08:24:47,865 | INFO     | sum of deviations: -2204378920.193182
[2025-04-19 04:25:02] 2025-04-19 08:24:47,865 | INFO     | mean x: 1745045668.8068182
[2025-04-19 04:25:02] 2025-04-19 08:24:47,865 | INFO     | mean y: 2349387.9943181816
[2025-04-19 04:25:02] 2025-04-19 08:24:47,866 | INFO     | -- intersect: 2277746379.5701365
[2025-04-19 04:25:02] 2025-04-19 08:24:47,866 | INFO     | intersect: 2277746379.5701365
[2025-04-19 04:25:02] 2025-04-19 08:24:47,866 | INFO     | chi2: 0.05137589618919886
[2025-04-19 04:25:02] 2025-04-19 08:24:47,866 | INFO     | current chi2=0.05137589618919886 (change=95.41273871399855 %)
[2025-04-19 04:25:02] 2025-04-19 08:24:47,866 | INFO     | sum of square deviations: 1550542844.947371
[2025-04-19 04:25:02] 2025-04-19 08:24:47,867 | INFO     | sum of deviations: -4536575177.526311
[2025-04-19 04:25:02] 2025-04-19 08:24:47,867 | INFO     | mean x: 1745045821.3157895
[2025-04-19 04:25:02] 2025-04-19 08:24:47,867 | INFO     | mean y: 2351883.380116959
[2025-04-19 04:25:02] 2025-04-19 08:24:47,867 | INFO     | -- intersect: 5108003483.02742
[2025-04-19 04:25:02] 2025-04-19 08:24:47,867 | INFO     | intersect: 5108003483.02742
[2025-04-19 04:25:02] 2025-04-19 08:24:47,868 | INFO     | chi2: 0.02931130823569844
[2025-04-19 04:25:02] 2025-04-19 08:24:47,868 | INFO     | current chi2=0.02931130823569844 (change=42.947353895773446 %)
[2025-04-19 04:25:02] 2025-04-19 08:24:47,868 | INFO     | sum of square deviations: 1418469456.5783188
[2025-04-19 04:25:02] 2025-04-19 08:24:47,869 | INFO     | sum of deviations: -4056600144.2530127
[2025-04-19 04:25:02] 2025-04-19 08:24:47,869 | INFO     | mean x: 1745045973.819277
[2025-04-19 04:25:02] 2025-04-19 08:24:47,869 | INFO     | mean y: 2351316.891566265
[2025-04-19 04:25:02] 2025-04-19 08:24:47,869 | INFO     | -- intersect: 4992909073.559458
[2025-04-19 04:25:02] 2025-04-19 08:24:47,869 | INFO     | intersect: 4992909073.559458
[2025-04-19 04:25:02] 2025-04-19 08:24:47,870 | INFO     | chi2: 0.028645513578476608
[2025-04-19 04:25:02] 2025-04-19 08:24:47,870 | INFO     | current chi2=0.028645513578476608 (change=2.271460051758991 %)
[2025-04-19 04:25:02] 2025-04-19 08:24:47,870 | INFO     | left removable region: 50
[2025-04-19 04:25:02] 2025-04-19 08:24:47,870 | INFO     | sum of square deviations: 762888358.399998
[2025-04-19 04:25:02] 2025-04-19 08:24:47,871 | INFO     | sum of deviations: 2057538188.7999997
[2025-04-19 04:25:02] 2025-04-19 08:24:47,871 | INFO     | mean x: 1745046553.2666667
[2025-04-19 04:25:02] 2025-04-19 08:24:47,871 | INFO     | mean y: 2345855.644444444
[2025-04-19 04:25:02] 2025-04-19 08:24:47,871 | INFO     | -- intersect: -4704109400.941614
[2025-04-19 04:25:02] 2025-04-19 08:24:47,871 | INFO     | intersect: -4704109400.941614
[2025-04-19 04:25:02] 2025-04-19 08:24:47,871 | INFO     | chi2: 0.014736078544199982
[2025-04-19 04:25:02] 2025-04-19 08:24:47,871 | INFO     | -- intersect: -4704109400.941614
[2025-04-19 04:25:02] 2025-04-19 08:24:47,872 | INFO     | current memory leak: 2.70 B/s (using 135 data points, chi2=0.01)
[2025-04-19 04:25:02] 2025-04-19 08:24:47,872 | INFO     | ..............................
[2025-04-19 04:25:02] 2025-04-19 08:24:47,872 | INFO     | . Timing measurements:
[2025-04-19 04:25:02] 2025-04-19 08:24:47,872 | INFO     | . get job = 0 s
[2025-04-19 04:25:02] 2025-04-19 08:24:47,872 | INFO     | . initial setup = 3 s
[2025-04-19 04:25:02] 2025-04-19 08:24:47,872 | INFO     | . payload setup = 8 s
[2025-04-19 04:25:02] 2025-04-19 08:24:47,873 | INFO     | . stage-in = 0 s
[2025-04-19 04:25:02] 2025-04-19 08:24:47,873 | INFO     | . payload execution = 11653 s
[2025-04-19 04:25:02] 2025-04-19 08:24:47,873 | INFO     | . stage-out = 3 s
[2025-04-19 04:25:02] 2025-04-19 08:24:47,873 | INFO     | . log creation = 0 s
[2025-04-19 04:25:02] 2025-04-19 08:24:47,873 | INFO     | ..............................
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | 
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | job summary report
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | --------------------------------------------------
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | PanDA job id: 6607182324
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | task id: 44075483
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | errors: (none)
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | pilot state: finished 
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | transexitcode: 0
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | exeerrorcode: 0
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | exeerrordiag: 
[2025-04-19 04:25:02] 2025-04-19 08:24:48,346 | INFO     | exitcode: 0
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | exitmsg: OK
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | cpuconsumptiontime: 37891 s
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | nevents: 400
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | neventsw: 0
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | pid: 2749859
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | pgrp: 2749859
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | corecount: 9
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | event service: False
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | sizes: {0: 2426595, 1: 2426850, 6: 2427056, 12: 2427084, 11667: 2456227, 11671: 2465168, 11673: 2465352, 11689: 2465522}
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | --------------------------------------------------
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | 
[2025-04-19 04:25:02] 2025-04-19 08:24:48,347 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 04:25:02] 2025-04-19 08:24:48,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 04:25:02] 2025-04-19 08:24:48,371 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 04:25:02] 2025-04-19 08:24:48,372 | INFO     | job 6607182324 has completed (purged errors)
[2025-04-19 04:25:02] 2025-04-19 08:24:48,372 | INFO     | overall cleanup function is called
[2025-04-19 04:25:02] 2025-04-19 08:24:49,381 | INFO     | --- collectZombieJob: --- 10, [2749859]
[2025-04-19 04:25:02] 2025-04-19 08:24:49,381 | INFO     | zombie collector waiting for pid 2749859
[2025-04-19 04:25:02] 2025-04-19 08:24:49,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 04:25:02] 2025-04-19 08:24:49,381 | INFO     | collected zombie processes
[2025-04-19 04:25:02] 2025-04-19 08:24:49,381 | INFO     | will attempt to kill all subprocesses of pid=2749859
[2025-04-19 04:25:02] 2025-04-19 08:24:49,651 | INFO     | process IDs to be killed: [2749859] (in reverse order)
[2025-04-19 04:25:02] 2025-04-19 08:24:49,742 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 04:25:02] 2025-04-19 08:24:49,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 04:25:02] 2025-04-19 08:24:49,754 | INFO     | did not find any defunct processes belonging to 2749859
[2025-04-19 04:25:02] 2025-04-19 08:24:49,765 | INFO     | did not find any defunct processes belonging to 2749859
[2025-04-19 04:25:02] 2025-04-19 08:24:49,766 | INFO     | ready for new job
[2025-04-19 04:25:02] 2025-04-19 08:24:49,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 04:25:02] 2025-04-19 08:24:49,767 | INFO     | **************************************
[2025-04-19 04:25:02] 2025-04-19 08:24:49,767 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 04:25:02] 2025-04-19 08:24:49,768 | INFO     | **************************************
[2025-04-19 04:25:02] 2025-04-19 08:24:49,768 | INFO     | 
[2025-04-19 04:25:02] 2025-04-19 08:24:49,782 | INFO     | architecture information:
[2025-04-19 04:25:02] 2025-04-19 08:24:49,783 | INFO     | executing command: cat /etc/os-release
[2025-04-19 04:25:02] 2025-04-19 08:24:49,851 | INFO     | cat /etc/os-release:
[2025-04-19 04:25:02] NAME="CentOS Linux"
[2025-04-19 04:25:02] VERSION="7 (Core)"
[2025-04-19 04:25:02] ID="centos"
[2025-04-19 04:25:02] ID_LIKE="rhel fedora"
[2025-04-19 04:25:02] VERSION_ID="7"
[2025-04-19 04:25:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 04:25:02] ANSI_COLOR="0;31"
[2025-04-19 04:25:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 04:25:02] HOME_URL="https://www.centos.org/"
[2025-04-19 04:25:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 04:25:02] 
[2025-04-19 04:25:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 04:25:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 04:25:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 04:25:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 04:25:02] 
[2025-04-19 04:25:02] 2025-04-19 08:24:49,851 | INFO     | **************************************
[2025-04-19 04:25:02] 2025-04-19 08:24:50,355 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 04:25:02] 2025-04-19 08:24:50,401 | INFO     | sufficient remaining disk space (75188142080 B)
[2025-04-19 04:25:02] 2025-04-19 08:24:50,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 04:25:02] 2025-04-19 08:24:50,402 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 04:25:02] 2025-04-19 08:24:50,402 | INFO     | update_server=False
[2025-04-19 04:25:02] 2025-04-19 08:24:50,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 04:25:02] 2025-04-19 08:24:50,402 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 04:25:02] 2025-04-19 08:24:50,403 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 04:25:02] 2025-04-19 08:24:50,403 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 04:25:02] 2025-04-19 08:24:50,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 04:25:02] 2025-04-19 08:24:50,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 04:25:02] 2025-04-19 08:24:50,799 | INFO     | all data control threads have been joined
[2025-04-19 04:25:02] 2025-04-19 08:24:50,900 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 04:25:02] 2025-04-19 08:24:50,901 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 04:25:02] 2025-04-19 08:24:50,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 04:25:02] 2025-04-19 08:24:50,901 | INFO     | will abort loop
[2025-04-19 04:25:02] 2025-04-19 08:24:51,408 | INFO     | [job] retrieve thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:51,433 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:51,492 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:51,557 | INFO     | all payload control threads have been joined
[2025-04-19 04:25:02] 2025-04-19 08:24:51,599 | INFO     | [payload] validate_post thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:51,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:51,780 | INFO     | all job control threads have been joined
[2025-04-19 04:25:02] 2025-04-19 08:24:51,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 04:25:02] 2025-04-19 08:24:51,805 | INFO     | [data] control thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:51,907 | INFO     | [job] job monitor thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:52,004 | INFO     | [job] validate thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:52,052 | INFO     | [data] copytool_in thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:52,098 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:52,433 | INFO     | [data] copytool_out thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:52,563 | INFO     | [payload] control thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:52,786 | INFO     | [job] control thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:52,901 | INFO     | [payload] failed_post thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:53,118 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 04:25:02] 2025-04-19 08:24:54,125 | INFO     | [job] queue monitor thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:55,808 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 04:25:02] 2025-04-19 08:24:56,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139922541561664)>', '<ExcThread(monitor, started 139921914328832)>']
[2025-04-19 04:25:02] 2025-04-19 08:24:57,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 04:25:02] 2025-04-19 08:24:57,450 | INFO     | [monitor] control thread has ended
[2025-04-19 04:25:02] 2025-04-19 08:25:01,623 | INFO     | all workflow threads have been joined
[2025-04-19 04:25:02] 2025-04-19 08:25:01,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 04:25:02] 2025-04-19 08:25:01,623 | INFO     | traces error code: 0
[2025-04-19 04:25:02] 2025-04-19 08:25:01,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 04:25:02] 2025-04-19 08:25:01,936 [wrapper] ==== pilot stdout END ====
[2025-04-19 04:25:02] 2025-04-19 08:25:01,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 04:25:02] 2025-04-19 08:25:01,966 [wrapper] pilotpid: 2742540
[2025-04-19 04:25:02] 2025-04-19 08:25:01,989 [wrapper] Pilot exit status: 0
[2025-04-19 04:25:02] 2025-04-19 08:25:02,091 [wrapper] pandaids: 6607182324
[2025-04-19 04:25:02] 2025-04-19 08:25:02,189 [wrapper] cleanup supervisor_pilot 3462445 2742541
[2025-04-19 04:25:02] 2025-04-19 08:25:02,193 [wrapper] Test setup, not cleaning
[2025-04-19 04:25:02] 2025-04-19 08:25:02,203 [wrapper] apfmon messages muted
[2025-04-19 04:25:02] 2025-04-19 08:25:02,242 [wrapper] ==== wrapper stdout END ====
[2025-04-19 04:25:02] 2025-04-19 08:25:02,281 [wrapper] ==== wrapper stderr END ====
[2025-04-19 04:25:02]  *** Error codes and diagnostics ***
[2025-04-19 04:25:02]     "exeErrorCode": 0,
[2025-04-19 04:25:02]     "exeErrorDiag": "",
[2025-04-19 04:25:02]     "pilotErrorCode": 0,
[2025-04-19 04:25:02]     "pilotErrorDiag": "",
[2025-04-19 04:25:02]  *** Listing of results directory ***
[2025-04-19 04:25:02] total 412904
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas    495897 Apr 18 21:43 pilot3.tar.gz
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas      5111 Apr 18 22:11 queuedata.json
[2025-04-19 04:25:02] -rwx------. 1 boincer umatlas     37140 Apr 18 22:12 runpilot2-wrapper.sh
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas       100 Apr 19 01:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 04:25:02] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 01:09 run_atlas
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas       105 Apr 19 01:09 job.xml
[2025-04-19 04:25:02] -rw-r--r--. 2 boincer umatlas 224688182 Apr 19 01:09 EVNT.44075481._002958.pool.root.1
[2025-04-19 04:25:02] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 01:09 start_atlas.sh
[2025-04-19 04:25:02] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 01:09 shared
[2025-04-19 04:25:02] -rw-r--r--. 2 boincer umatlas    508896 Apr 19 01:09 input.tar.gz
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas         0 Apr 19 01:09 boinc_lockfile
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 01:09 pandaJob.out
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas       467 Apr 19 01:09 setup.sh.local
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas    991292 Apr 19 01:09 agis_schedconf.cvmfs.json
[2025-04-19 04:25:02] drwx------. 4 boincer umatlas      4096 Apr 19 01:09 pilot3
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas      6842 Apr 19 04:21 init_data.xml
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas 191513774 Apr 19 04:23 HITS.44075483._076210.pool.root.1
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas       531 Apr 19 04:23 boinc_task_state.xml
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas      1041 Apr 19 04:24 memory_monitor_summary.json
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas        95 Apr 19 04:24 pilot_heartbeat.json
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas   1618536 Apr 19 04:24 agis_ddmendpoints.agis.ALL.json
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas    373675 Apr 19 04:24 log.44075483._076210.job.log.tgz.1
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas      7721 Apr 19 04:24 heartbeat.json
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas        28 Apr 19 04:24 wrapper_checkpoint.txt
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 04:24 boinc_mmap_file
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas      4662 Apr 19 04:25 pilotlog.txt
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas    999191 Apr 19 04:25 log.44075483._076210.job.log.1
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas       357 Apr 19 04:25 output.list
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas       620 Apr 19 04:25 runtime_log
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas   1392640 Apr 19 04:25 result.tar.gz
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas     11424 Apr 19 04:25 runtime_log.err
[2025-04-19 04:25:02] -rw-------. 1 boincer umatlas       657 Apr 19 04:25 CanNDmlrCQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCigLDmuQTRYo.diag
[2025-04-19 04:25:02] -rw-r--r--. 1 boincer umatlas     20933 Apr 19 04:25 stderr.txt
[2025-04-19 04:25:03] HITS file was successfully produced:
[2025-04-19 04:25:03] -rw-------. 1 boincer umatlas 191513774 Apr 19 04:23 shared/HITS.pool.root.1
[2025-04-19 04:25:03]  *** Contents of shared directory: ***
[2025-04-19 04:25:03] total 408336
[2025-04-19 04:25:03] -rw-r--r--. 2 boincer umatlas 224688182 Apr 19 01:09 ATLAS.root_0
[2025-04-19 04:25:03] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 01:09 start_atlas.sh
[2025-04-19 04:25:03] -rw-r--r--. 2 boincer umatlas    508896 Apr 19 01:09 input.tar.gz
[2025-04-19 04:25:03] -rw-------. 1 boincer umatlas 191513774 Apr 19 04:23 HITS.pool.root.1
[2025-04-19 04:25:03] -rw-------. 1 boincer umatlas   1392640 Apr 19 04:25 result.tar.gz
04:25:04 (2738828): run_atlas exited; CPU time 38159.660146
04:25:04 (2738828): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN