Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
08:24:44 (1299791): wrapper (7.7.26015): starting
08:24:44 (1299791): wrapper: running run_atlas (--nthreads 6)
[2025-04-19 08:24:44] Arguments: --nthreads 6
[2025-04-19 08:24:44] Threads: 6
[2025-04-19 08:24:44] Checking for CVMFS
[2025-04-19 08:24:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 08:24:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 08:24:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 08:24:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 08:24:45] 2.11.5.0 1260526 24 46808 145029 3 49 4060300 4194304 1836 130560 0 97202 99.991 3528 494 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2025-04-19 08:24:45] CVMFS is ok
[2025-04-19 08:24:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 08:24:45] Checking for apptainer binary...
[2025-04-19 08:24:45] apptainer is not installed, using version from CVMFS
[2025-04-19 08:24:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 08:24:45] boinc-b450f
[2025-04-19 08:24:45] apptainer works
[2025-04-19 08:24:45] Set ATHENA_PROC_NUMBER=6
[2025-04-19 08:24:45] Set ATHENA_CORE_NUMBER=6
[2025-04-19 08:24:45] Starting ATLAS job with PandaID=6607180486
[2025-04-19 08:24:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 09:40:08]  *** The last 200 lines of the pilot log: ***
[2025-04-19 09:40:08]  is_altstaged=None
[2025-04-19 09:40:08]  is_tar=False
[2025-04-19 09:40:08]  lfn=log.44075483._076114.job.log.tgz.1
[2025-04-19 09:40:08]  mtime=0
[2025-04-19 09:40:08]  protocol_id=None
[2025-04-19 09:40:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 09:40:08]  replicas=None
[2025-04-19 09:40:08]  scope=mc23_13p6TeV
[2025-04-19 09:40:08]  status=None
[2025-04-19 09:40:08]  status_code=0
[2025-04-19 09:40:08]  storage_token=
[2025-04-19 09:40:08]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6607180486/log.44075483._076114.job.log.tgz.1
[2025-04-19 09:40:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/10/log.44075483._076114.job.log.tgz.1
[2025-04-19 09:40:08]  workdir=None
[2025-04-19 09:40:08] ]
[2025-04-19 09:40:08] 2025-04-19 07:39:41,878 | INFO     | transferring file log.44075483._076114.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6607180486/log.44075483._076114.job.log.tgz.1 to /var/lib/boinc
[2025-04-19 09:40:08] 2025-04-19 07:39:41,878 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6607180486/log.44075483._076114.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.440754
[2025-04-19 09:40:08] 2025-04-19 07:39:41,884 | INFO     | adding to output.list: log.44075483._076114.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/10/log.44075483._076114.job.log.tg
[2025-04-19 09:40:08] 2025-04-19 07:39:41,884 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 09:40:08] 2025-04-19 07:39:41,884 | INFO     | summary of transferred files:
[2025-04-19 09:40:08] 2025-04-19 07:39:41,884 | INFO     |  -- lfn=log.44075483._076114.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 09:40:08] 2025-04-19 07:39:41,884 | INFO     | stage-out finished correctly
[2025-04-19 09:40:08] 2025-04-19 07:39:42,686 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 09:40:08] 2025-04-19 07:39:43,589 | INFO     | monitor loop #342: job 0:6607180486 is in state 'finished'
[2025-04-19 09:40:08] 2025-04-19 07:39:43,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:40:08] 2025-04-19 07:39:44,591 | INFO     | job 6607180486 has state=finished
[2025-04-19 09:40:08] 2025-04-19 07:39:44,592 | INFO     | preparing for final server update for job 6607180486 in state='finished'
[2025-04-19 09:40:08] 2025-04-19 07:39:44,592 | INFO     | this job has now completed (state=finished)
[2025-04-19 09:40:08] 2025-04-19 07:39:44,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 09:40:08] 2025-04-19 07:39:44,592 | INFO     | log transfer has been attempted: DONE
[2025-04-19 09:40:08] 2025-04-19 07:39:44,592 | INFO     | job 6607180486 has finished - writing final server update
[2025-04-19 09:40:08] 2025-04-19 07:39:44,592 | INFO     | total number of processed events: 400 (read)
[2025-04-19 09:40:08] 2025-04-19 07:39:44,593 | INFO     | executing command: lscpu
[2025-04-19 09:40:08] 2025-04-19 07:39:44,606 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 09:40:08] 2025-04-19 07:39:46,092 | INFO     | monitor loop #343: job 0:6607180486 is in state 'finished'
[2025-04-19 09:40:08] 2025-04-19 07:39:46,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:40:08] 2025-04-19 07:39:48,595 | INFO     | monitor loop #344: job 0:6607180486 is in state 'finished'
[2025-04-19 09:40:08] 2025-04-19 07:39:48,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:40:08] 2025-04-19 07:39:48,661 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 09:40:08] 2025-04-19 07:39:48,661 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6607180486/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 09:40:08] 2025-04-19 07:39:48,662 | INFO     | extracted standard info from prmon json
[2025-04-19 09:40:08] 2025-04-19 07:39:48,662 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 09:40:08] 2025-04-19 07:39:48,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 09:40:08] 2025-04-19 07:39:48,662 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 09:40:08] 2025-04-19 07:39:48,662 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 09:40:08] 2025-04-19 07:39:48,663 | INFO     | fitting pss+swap vs Time
[2025-04-19 09:40:08] 2025-04-19 07:39:48,663 | INFO     | sum of square deviations: 93240818.0
[2025-04-19 09:40:08] 2025-04-19 07:39:48,663 | INFO     | sum of deviations: -2923276831.0000005
[2025-04-19 09:40:08] 2025-04-19 07:39:48,663 | INFO     | mean x: 1745046234.0
[2025-04-19 09:40:08] 2025-04-19 07:39:48,663 | INFO     | mean y: 2656041.6716417912
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | -- intersect: 54713171610.89375
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | intersect: 54713171610.89375
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | chi2: 0.42684884946043233
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | -- intersect: 54713171610.89375
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | current memory leak: -31.35 B/s (using 67 data points, chi2=0.43)
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | ..............................
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | . Timing measurements:
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | . get job = 0 s
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | . initial setup = 2 s
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | . payload setup = 2 s
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | . stage-in = 0 s
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | . payload execution = 4463 s
[2025-04-19 09:40:08] 2025-04-19 07:39:48,664 | INFO     | . stage-out = 0 s
[2025-04-19 09:40:08] 2025-04-19 07:39:48,665 | INFO     | . log creation = 0 s
[2025-04-19 09:40:08] 2025-04-19 07:39:48,665 | INFO     | ..............................
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | 
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | job summary report
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | --------------------------------------------------
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | PanDA job id: 6607180486
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | task id: 44075483
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | errors: (none)
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | pilot state: finished 
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | transexitcode: 0
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | exeerrorcode: 0
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | exeerrordiag: 
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | exitcode: 0
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | exitmsg: OK
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | cpuconsumptiontime: 23876 s
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | nevents: 400
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | neventsw: 0
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | pid: 1310710
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | pgrp: 1310710
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | corecount: 6
[2025-04-19 09:40:08] 2025-04-19 07:39:48,722 | INFO     | event service: False
[2025-04-19 09:40:08] 2025-04-19 07:39:48,723 | INFO     | sizes: {0: 2426780, 2: 2426986, 11: 2427014, 4469: 2453153, 4470: 2462108, 4471: 2462164, 4477: 2462462}
[2025-04-19 09:40:08] 2025-04-19 07:39:48,723 | INFO     | --------------------------------------------------
[2025-04-19 09:40:08] 2025-04-19 07:39:48,723 | INFO     | 
[2025-04-19 09:40:08] 2025-04-19 07:39:48,723 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | job 6607180486 has completed (purged errors)
[2025-04-19 09:40:08] 2025-04-19 07:39:48,738 | INFO     | overall cleanup function is called
[2025-04-19 09:40:08] 2025-04-19 07:39:49,744 | INFO     | --- collectZombieJob: --- 10, [1310710]
[2025-04-19 09:40:08] 2025-04-19 07:39:49,744 | INFO     | zombie collector waiting for pid 1310710
[2025-04-19 09:40:08] 2025-04-19 07:39:49,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 09:40:08] 2025-04-19 07:39:49,744 | INFO     | collected zombie processes
[2025-04-19 09:40:08] 2025-04-19 07:39:49,744 | INFO     | will attempt to kill all subprocesses of pid=1310710
[2025-04-19 09:40:08] 2025-04-19 07:39:49,806 | INFO     | process IDs to be killed: [1310710] (in reverse order)
[2025-04-19 09:40:08] 2025-04-19 07:39:49,830 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 09:40:08] 2025-04-19 07:39:49,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 09:40:08] 2025-04-19 07:39:49,832 | INFO     | did not find any defunct processes belonging to 1310710
[2025-04-19 09:40:08] 2025-04-19 07:39:49,833 | INFO     | did not find any defunct processes belonging to 1310710
[2025-04-19 09:40:08] 2025-04-19 07:39:49,833 | INFO     | ready for new job
[2025-04-19 09:40:08] 2025-04-19 07:39:49,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 09:40:08] 2025-04-19 07:39:49,834 | INFO     | **************************************
[2025-04-19 09:40:08] 2025-04-19 07:39:49,834 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 09:40:08] 2025-04-19 07:39:49,834 | INFO     | **************************************
[2025-04-19 09:40:08] 2025-04-19 07:39:49,834 | INFO     | 
[2025-04-19 09:40:08] 2025-04-19 07:39:49,835 | INFO     | architecture information:
[2025-04-19 09:40:08] 2025-04-19 07:39:49,835 | INFO     | executing command: cat /etc/os-release
[2025-04-19 09:40:08] 2025-04-19 07:39:49,841 | INFO     | cat /etc/os-release:
[2025-04-19 09:40:08] NAME="CentOS Linux"
[2025-04-19 09:40:08] VERSION="7 (Core)"
[2025-04-19 09:40:08] ID="centos"
[2025-04-19 09:40:08] ID_LIKE="rhel fedora"
[2025-04-19 09:40:08] VERSION_ID="7"
[2025-04-19 09:40:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 09:40:08] ANSI_COLOR="0;31"
[2025-04-19 09:40:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 09:40:08] HOME_URL="https://www.centos.org/"
[2025-04-19 09:40:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 09:40:08] 
[2025-04-19 09:40:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 09:40:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 09:40:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 09:40:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 09:40:08] 
[2025-04-19 09:40:08] 2025-04-19 07:39:49,841 | INFO     | **************************************
[2025-04-19 09:40:08] 2025-04-19 07:39:50,343 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-04-19 09:40:08] 2025-04-19 07:39:50,351 | INFO     | sufficient remaining disk space (21595422720 B)
[2025-04-19 09:40:08] 2025-04-19 07:39:50,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 09:40:08] 2025-04-19 07:39:50,351 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 09:40:08] 2025-04-19 07:39:50,351 | INFO     | update_server=False
[2025-04-19 09:40:08] 2025-04-19 07:39:50,351 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 09:40:08] 2025-04-19 07:39:50,351 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 09:40:08] 2025-04-19 07:39:50,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 09:40:08] 2025-04-19 07:39:50,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:40:08] 2025-04-19 07:39:50,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:40:08] 2025-04-19 07:39:50,352 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 09:40:08] 2025-04-19 07:39:50,352 | INFO     | aborting loop
[2025-04-19 09:40:08] 2025-04-19 07:39:50,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 09:40:08] 2025-04-19 07:39:50,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 09:40:08] 2025-04-19 07:39:50,802 | INFO     | all data control threads have been joined
[2025-04-19 09:40:08] 2025-04-19 07:39:51,016 | INFO     | all payload control threads have been joined
[2025-04-19 09:40:08] 2025-04-19 07:39:51,169 | INFO     | all job control threads have been joined
[2025-04-19 09:40:08] 2025-04-19 07:39:51,356 | INFO     | [job] queue monitor thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:51,356 | INFO     | [job] job monitor thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:51,356 | INFO     | [job] retrieve thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:51,751 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:51,808 | INFO     | [data] control thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:51,851 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:52,021 | INFO     | [payload] control thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:52,175 | INFO     | [job] control thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:52,357 | INFO     | [data] copytool_out thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:52,472 | INFO     | [job] validate thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:52,572 | INFO     | [payload] failed_post thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:52,589 | INFO     | [data] copytool_in thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:52,626 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:52,674 | INFO     | [payload] validate_post thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:39:53,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 09:40:08] 2025-04-19 07:39:55,997 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-04-19 09:40:08] 2025-04-19 07:39:57,264 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:40:00,426 | INFO     | job.realtimelogging is not enabled
[2025-04-19 09:40:08] 2025-04-19 07:40:01,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 09:40:08] 2025-04-19 07:40:03,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140367139477312)>', '<ExcThread(monitor, started 140366309226240)>']
[2025-04-19 09:40:08] 2025-04-19 07:40:04,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 09:40:08] 2025-04-19 07:40:04,421 | INFO     | [monitor] control thread has ended
[2025-04-19 09:40:08] 2025-04-19 07:40:08,486 | INFO     | all workflow threads have been joined
[2025-04-19 09:40:08] 2025-04-19 07:40:08,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 09:40:08] 2025-04-19 07:40:08,486 | INFO     | traces error code: 0
[2025-04-19 09:40:08] 2025-04-19 07:40:08,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 09:40:08] 2025-04-19 07:40:08,537 [wrapper] ==== pilot stdout END ====
[2025-04-19 09:40:08] 2025-04-19 07:40:08,546 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 09:40:08] 2025-04-19 07:40:08,547 [wrapper] pilotpid: 1303847
[2025-04-19 09:40:08] 2025-04-19 07:40:08,548 [wrapper] Pilot exit status: 0
[2025-04-19 09:40:08] 2025-04-19 07:40:08,552 [wrapper] pandaids: 6607180486
[2025-04-19 09:40:08] 2025-04-19 07:40:08,564 [wrapper] cleanup supervisor_pilot 1368562 1303848
[2025-04-19 09:40:08] 2025-04-19 07:40:08,565 [wrapper] Test setup, not cleaning
[2025-04-19 09:40:08] 2025-04-19 07:40:08,566 [wrapper] apfmon messages muted
[2025-04-19 09:40:08] 2025-04-19 07:40:08,567 [wrapper] ==== wrapper stdout END ====
[2025-04-19 09:40:08] 2025-04-19 07:40:08,569 [wrapper] ==== wrapper stderr END ====
[2025-04-19 09:40:08]  *** Error codes and diagnostics ***
[2025-04-19 09:40:08]     "exeErrorCode": 0,
[2025-04-19 09:40:08]     "exeErrorDiag": "",
[2025-04-19 09:40:08]     "pilotErrorCode": 0,
[2025-04-19 09:40:08]     "pilotErrorDiag": "",
[2025-04-19 09:40:08]  *** Listing of results directory ***
[2025-04-19 09:40:08] total 404094
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc    495897 Apr 19 03:43 pilot3.tar.gz
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc      5111 Apr 19 03:46 queuedata.json
[2025-04-19 09:40:08] -rwx------ 1 boinc boinc     37140 Apr 19 03:48 runpilot2-wrapper.sh
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc       100 Apr 19 08:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 09:40:08] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 08:24 run_atlas
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc       105 Apr 19 08:24 job.xml
[2025-04-19 09:40:08] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:24 start_atlas.sh
[2025-04-19 09:40:08] drwxrwx--x 2 boinc boinc         5 Apr 19 08:24 shared
[2025-04-19 09:40:08] -rw-r--r-- 2 boinc boinc    508889 Apr 19 08:24 input.tar.gz
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc      7839 Apr 19 08:24 init_data.xml
[2025-04-19 09:40:08] -rw-r--r-- 2 boinc boinc 222075079 Apr 19 08:24 EVNT.44075481._002954.pool.root.1
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc         0 Apr 19 08:24 boinc_lockfile
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc      2578 Apr 19 08:24 pandaJob.out
[2025-04-19 09:40:08] -rw------- 1 boinc boinc       466 Apr 19 08:24 setup.sh.local
[2025-04-19 09:40:08] -rw------- 1 boinc boinc    991292 Apr 19 08:24 agis_schedconf.cvmfs.json
[2025-04-19 09:40:08] -rw------- 1 boinc boinc   1618536 Apr 19 08:24 agis_ddmendpoints.agis.ALL.json
[2025-04-19 09:40:08] drwx------ 4 boinc boinc        20 Apr 19 08:24 pilot3
[2025-04-19 09:40:08] -rw------- 1 boinc boinc 190162192 Apr 19 09:39 HITS.44075483._076114.pool.root.1
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc       529 Apr 19 09:39 boinc_task_state.xml
[2025-04-19 09:40:08] -rw------- 1 boinc boinc        95 Apr 19 09:39 pilot_heartbeat.json
[2025-04-19 09:40:08] -rw------- 1 boinc boinc      1035 Apr 19 09:39 memory_monitor_summary.json
[2025-04-19 09:40:08] -rw------- 1 boinc boinc    264859 Apr 19 09:39 log.44075483._076114.job.log.tgz.1
[2025-04-19 09:40:08] -rw------- 1 boinc boinc      7679 Apr 19 09:39 heartbeat.json
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc        27 Apr 19 09:39 wrapper_checkpoint.txt
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc      8192 Apr 19 09:39 boinc_mmap_file
[2025-04-19 09:40:08] -rw------- 1 boinc boinc      4555 Apr 19 09:40 pilotlog.txt
[2025-04-19 09:40:08] -rw------- 1 boinc boinc    456737 Apr 19 09:40 log.44075483._076114.job.log.1
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc     11539 Apr 19 09:40 runtime_log.err
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc       620 Apr 19 09:40 runtime_log
[2025-04-19 09:40:08] -rw------- 1 boinc boinc    737280 Apr 19 09:40 result.tar.gz
[2025-04-19 09:40:08] -rw------- 1 boinc boinc       357 Apr 19 09:40 output.list
[2025-04-19 09:40:08] -rw------- 1 boinc boinc       657 Apr 19 09:40 geeLDmfUCQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIfgLDmp2jpZn.diag
[2025-04-19 09:40:08] -rw-r--r-- 1 boinc boinc     21114 Apr 19 09:40 stderr.txt
[2025-04-19 09:40:08] HITS file was successfully produced:
[2025-04-19 09:40:08] -rw------- 1 boinc boinc 190162192 Apr 19 09:39 shared/HITS.pool.root.1
[2025-04-19 09:40:08]  *** Contents of shared directory: ***
[2025-04-19 09:40:08] total 403348
[2025-04-19 09:40:08] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:24 start_atlas.sh
[2025-04-19 09:40:08] -rw-r--r-- 2 boinc boinc    508889 Apr 19 08:24 input.tar.gz
[2025-04-19 09:40:08] -rw-r--r-- 2 boinc boinc 222075079 Apr 19 08:24 ATLAS.root_0
[2025-04-19 09:40:08] -rw------- 1 boinc boinc 190162192 Apr 19 09:39 HITS.pool.root.1
[2025-04-19 09:40:08] -rw------- 1 boinc boinc    737280 Apr 19 09:40 result.tar.gz
09:40:10 (1299791): run_atlas exited; CPU time 23930.586535
09:40:10 (1299791): called boinc_finish(0)

</stderr_txt>
]]>

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