Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:36:08 (24181): wrapper (7.7.26015): starting
00:36:08 (24181): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 00:36:08] Arguments: --nthreads 12
[2025-04-19 00:36:08] Threads: 12
[2025-04-19 00:36:08] Checking for CVMFS
[2025-04-19 00:36:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 00:36:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 00:36:08] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 00:36:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 00:36:09] 2.11.2.0 12163 368482 164264 145026 2 58 19724202 20275201 1 130560 0 23764805 99.971 7516427 53598 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 00:36:09] CVMFS is ok
[2025-04-19 00:36:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 00:36:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 00:36:09] Further information can be found at the LHC@home message board.
[2025-04-19 00:36:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 00:36:09] Checking for apptainer binary...
[2025-04-19 00:36:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 00:36:09] Running /usr/bin/apptainer --version
[2025-04-19 00:36:09] apptainer version 1.3.2-1.el7
[2025-04-19 00:36:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 00:36:10] c-205-20.aglt2.org
[2025-04-19 00:36:10] apptainer works
[2025-04-19 00:36:10] Set ATHENA_PROC_NUMBER=12
[2025-04-19 00:36:10] Set ATHENA_CORE_NUMBER=12
[2025-04-19 00:36:10] Starting ATLAS job with PandaID=6606682563
[2025-04-19 00:36:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 02:01:14]  *** The last 200 lines of the pilot log: ***
[2025-04-19 02:01:14]  guid=3384b8ca-d859-4626-9f36-01c8ea2ba725
[2025-04-19 02:01:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 02:01:14]  is_altstaged=None
[2025-04-19 02:01:14]  is_tar=False
[2025-04-19 02:01:14]  lfn=log.44075483._071974.job.log.tgz.1
[2025-04-19 02:01:14]  mtime=0
[2025-04-19 02:01:14]  protocol_id=None
[2025-04-19 02:01:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 02:01:14]  replicas=None
[2025-04-19 02:01:14]  scope=mc23_13p6TeV
[2025-04-19 02:01:14]  status=None
[2025-04-19 02:01:14]  status_code=0
[2025-04-19 02:01:14]  storage_token=
[2025-04-19 02:01:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606682563/log.44075483._071974.job.log.tgz.1
[2025-04-19 02:01:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/cd/log.44075483._071974.job.log.tgz.1
[2025-04-19 02:01:14]  workdir=None
[2025-04-19 02:01:14] ]
[2025-04-19 02:01:14] 2025-04-19 06:00:48,342 | INFO     | transferring file log.44075483._071974.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606682563/log.44075483._071974.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 02:01:14] 2025-04-19 06:00:48,342 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606682563/log.44075483._071974.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._071974.job
[2025-04-19 02:01:14] 2025-04-19 06:00:48,364 | INFO     | adding to output.list: log.44075483._071974.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/cd/log.44075483._071974.job.log.tg
[2025-04-19 02:01:14] 2025-04-19 06:00:48,364 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 02:01:14] 2025-04-19 06:00:48,365 | INFO     | summary of transferred files:
[2025-04-19 02:01:14] 2025-04-19 06:00:48,365 | INFO     |  -- lfn=log.44075483._071974.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 02:01:14] 2025-04-19 06:00:48,365 | INFO     | stage-out finished correctly
[2025-04-19 02:01:14] 2025-04-19 06:00:49,558 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 02:01:14] 2025-04-19 06:00:49,729 | INFO     | monitor loop #378: job 0:6606682563 is in state 'finished'
[2025-04-19 02:01:14] 2025-04-19 06:00:49,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 02:01:14] 2025-04-19 06:00:51,126 | INFO     | job 6606682563 has state=finished
[2025-04-19 02:01:14] 2025-04-19 06:00:51,126 | INFO     | preparing for final server update for job 6606682563 in state='finished'
[2025-04-19 02:01:14] 2025-04-19 06:00:51,127 | INFO     | this job has now completed (state=finished)
[2025-04-19 02:01:14] 2025-04-19 06:00:51,127 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 02:01:14] 2025-04-19 06:00:51,127 | INFO     | log transfer has been attempted: DONE
[2025-04-19 02:01:14] 2025-04-19 06:00:51,127 | INFO     | job 6606682563 has finished - writing final server update
[2025-04-19 02:01:14] 2025-04-19 06:00:51,127 | INFO     | total number of processed events: 400 (read)
[2025-04-19 02:01:14] 2025-04-19 06:00:51,129 | INFO     | executing command: lscpu
[2025-04-19 02:01:14] 2025-04-19 06:00:51,153 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 02:01:14] 2025-04-19 06:00:52,232 | INFO     | monitor loop #379: job 0:6606682563 is in state 'finished'
[2025-04-19 02:01:14] 2025-04-19 06:00:52,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 02:01:14] 2025-04-19 06:00:54,734 | INFO     | monitor loop #380: job 0:6606682563 is in state 'finished'
[2025-04-19 02:01:14] 2025-04-19 06:00:54,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 02:01:14] 2025-04-19 06:00:55,750 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 02:01:14] 2025-04-19 06:00:55,750 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606682563/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 02:01:14] 2025-04-19 06:00:55,751 | INFO     | extracted standard info from prmon json
[2025-04-19 02:01:14] 2025-04-19 06:00:55,752 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 02:01:14] 2025-04-19 06:00:55,752 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 02:01:14] 2025-04-19 06:00:55,752 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 02:01:14] 2025-04-19 06:00:55,752 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 02:01:14] 2025-04-19 06:00:55,755 | INFO     | fitting pss+swap vs Time
[2025-04-19 02:01:14] 2025-04-19 06:00:55,755 | INFO     | sum of square deviations: 136095575.0
[2025-04-19 02:01:14] 2025-04-19 06:00:55,756 | INFO     | sum of deviations: 16872071251.999994
[2025-04-19 02:01:14] 2025-04-19 06:00:55,756 | INFO     | mean x: 1745040005.5
[2025-04-19 02:01:14] 2025-04-19 06:00:55,756 | INFO     | mean y: 2627293.947368421
[2025-04-19 02:01:14] 2025-04-19 06:00:55,757 | INFO     | -- intersect: -216333864986.47
[2025-04-19 02:01:14] 2025-04-19 06:00:55,757 | INFO     | intersect: -216333864986.47
[2025-04-19 02:01:14] 2025-04-19 06:00:55,757 | INFO     | chi2: 2.3734453461401492
[2025-04-19 02:01:14] 2025-04-19 06:00:55,757 | INFO     | -- intersect: -216333864986.47
[2025-04-19 02:01:14] 2025-04-19 06:00:55,758 | INFO     | current memory leak: 123.97 B/s (using 76 data points, chi2=2.37)
[2025-04-19 02:01:14] 2025-04-19 06:00:55,758 | INFO     | ..............................
[2025-04-19 02:01:14] 2025-04-19 06:00:55,758 | INFO     | . Timing measurements:
[2025-04-19 02:01:14] 2025-04-19 06:00:55,758 | INFO     | . get job = 0 s
[2025-04-19 02:01:14] 2025-04-19 06:00:55,758 | INFO     | . initial setup = 2 s
[2025-04-19 02:01:14] 2025-04-19 06:00:55,758 | INFO     | . payload setup = 7 s
[2025-04-19 02:01:14] 2025-04-19 06:00:55,758 | INFO     | . stage-in = 0 s
[2025-04-19 02:01:14] 2025-04-19 06:00:55,758 | INFO     | . payload execution = 5036 s
[2025-04-19 02:01:14] 2025-04-19 06:00:55,759 | INFO     | . stage-out = 0 s
[2025-04-19 02:01:14] 2025-04-19 06:00:55,759 | INFO     | . log creation = 0 s
[2025-04-19 02:01:14] 2025-04-19 06:00:55,759 | INFO     | ..............................
[2025-04-19 02:01:14] 2025-04-19 06:00:55,843 | INFO     | 
[2025-04-19 02:01:14] 2025-04-19 06:00:55,843 | INFO     | job summary report
[2025-04-19 02:01:14] 2025-04-19 06:00:55,843 | INFO     | --------------------------------------------------
[2025-04-19 02:01:14] 2025-04-19 06:00:55,844 | INFO     | PanDA job id: 6606682563
[2025-04-19 02:01:14] 2025-04-19 06:00:55,844 | INFO     | task id: 44075483
[2025-04-19 02:01:14] 2025-04-19 06:00:55,844 | INFO     | errors: (none)
[2025-04-19 02:01:14] 2025-04-19 06:00:55,844 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 02:01:14] 2025-04-19 06:00:55,844 | INFO     | pilot state: finished 
[2025-04-19 02:01:14] 2025-04-19 06:00:55,844 | INFO     | transexitcode: 0
[2025-04-19 02:01:14] 2025-04-19 06:00:55,845 | INFO     | exeerrorcode: 0
[2025-04-19 02:01:14] 2025-04-19 06:00:55,845 | INFO     | exeerrordiag: 
[2025-04-19 02:01:14] 2025-04-19 06:00:55,845 | INFO     | exitcode: 0
[2025-04-19 02:01:14] 2025-04-19 06:00:55,845 | INFO     | exitmsg: OK
[2025-04-19 02:01:14] 2025-04-19 06:00:55,845 | INFO     | cpuconsumptiontime: 47952 s
[2025-04-19 02:01:14] 2025-04-19 06:00:55,845 | INFO     | nevents: 400
[2025-04-19 02:01:14] 2025-04-19 06:00:55,845 | INFO     | neventsw: 0
[2025-04-19 02:01:14] 2025-04-19 06:00:55,846 | INFO     | pid: 1747
[2025-04-19 02:01:14] 2025-04-19 06:00:55,846 | INFO     | pgrp: 1747
[2025-04-19 02:01:14] 2025-04-19 06:00:55,846 | INFO     | corecount: 12
[2025-04-19 02:01:14] 2025-04-19 06:00:55,846 | INFO     | event service: False
[2025-04-19 02:01:14] 2025-04-19 06:00:55,846 | INFO     | sizes: {0: 2426646, 1: 2426845, 5: 2427051, 11: 2427107, 5047: 2453252, 5049: 2462193, 5050: 2462377, 5056: 2462547}
[2025-04-19 02:01:14] 2025-04-19 06:00:55,846 | INFO     | --------------------------------------------------
[2025-04-19 02:01:14] 2025-04-19 06:00:55,847 | INFO     | 
[2025-04-19 02:01:14] 2025-04-19 06:00:55,847 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 02:01:14] 2025-04-19 06:00:55,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,871 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,871 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,871 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 02:01:14] 2025-04-19 06:00:55,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,874 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 02:01:14] 2025-04-19 06:00:55,874 | INFO     | job 6606682563 has completed (purged errors)
[2025-04-19 02:01:14] 2025-04-19 06:00:55,874 | INFO     | overall cleanup function is called
[2025-04-19 02:01:14] 2025-04-19 06:00:56,882 | INFO     | --- collectZombieJob: --- 10, [1747]
[2025-04-19 02:01:14] 2025-04-19 06:00:56,882 | INFO     | zombie collector waiting for pid 1747
[2025-04-19 02:01:14] 2025-04-19 06:00:56,883 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 02:01:14] 2025-04-19 06:00:56,883 | INFO     | collected zombie processes
[2025-04-19 02:01:14] 2025-04-19 06:00:56,883 | INFO     | will attempt to kill all subprocesses of pid=1747
[2025-04-19 02:01:14] 2025-04-19 06:00:56,976 | INFO     | process IDs to be killed: [1747] (in reverse order)
[2025-04-19 02:01:14] 2025-04-19 06:00:57,028 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 02:01:14] 2025-04-19 06:00:57,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 02:01:14] 2025-04-19 06:00:57,031 | INFO     | did not find any defunct processes belonging to 1747
[2025-04-19 02:01:14] 2025-04-19 06:00:57,035 | INFO     | did not find any defunct processes belonging to 1747
[2025-04-19 02:01:14] 2025-04-19 06:00:57,035 | INFO     | ready for new job
[2025-04-19 02:01:14] 2025-04-19 06:00:57,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 02:01:14] 2025-04-19 06:00:57,036 | INFO     | **************************************
[2025-04-19 02:01:14] 2025-04-19 06:00:57,037 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 02:01:14] 2025-04-19 06:00:57,037 | INFO     | **************************************
[2025-04-19 02:01:14] 2025-04-19 06:00:57,037 | INFO     | 
[2025-04-19 02:01:14] 2025-04-19 06:00:57,038 | INFO     | architecture information:
[2025-04-19 02:01:14] 2025-04-19 06:00:57,038 | INFO     | executing command: cat /etc/os-release
[2025-04-19 02:01:14] 2025-04-19 06:00:57,053 | INFO     | cat /etc/os-release:
[2025-04-19 02:01:14] NAME="CentOS Linux"
[2025-04-19 02:01:14] VERSION="7 (Core)"
[2025-04-19 02:01:14] ID="centos"
[2025-04-19 02:01:14] ID_LIKE="rhel fedora"
[2025-04-19 02:01:14] VERSION_ID="7"
[2025-04-19 02:01:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 02:01:14] ANSI_COLOR="0;31"
[2025-04-19 02:01:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 02:01:14] HOME_URL="https://www.centos.org/"
[2025-04-19 02:01:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 02:01:14] 
[2025-04-19 02:01:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 02:01:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 02:01:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 02:01:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 02:01:14] 
[2025-04-19 02:01:14] 2025-04-19 06:00:57,053 | INFO     | **************************************
[2025-04-19 02:01:14] 2025-04-19 06:00:57,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 02:01:14] 2025-04-19 06:00:57,573 | INFO     | sufficient remaining disk space (29386342400 B)
[2025-04-19 02:01:14] 2025-04-19 06:00:57,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 02:01:14] 2025-04-19 06:00:57,573 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 02:01:14] 2025-04-19 06:00:57,574 | INFO     | update_server=False
[2025-04-19 02:01:14] 2025-04-19 06:00:57,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 02:01:14] 2025-04-19 06:00:57,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:01:14] 2025-04-19 06:00:57,578 | INFO     | all data control threads have been joined
[2025-04-19 02:01:14] 2025-04-19 06:00:57,931 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 02:01:14] 2025-04-19 06:00:57,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 02:01:14] 2025-04-19 06:00:57,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 02:01:14] 2025-04-19 06:00:58,243 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:01:14] 2025-04-19 06:00:58,243 | INFO     | aborting loop
[2025-04-19 02:01:14] 2025-04-19 06:00:58,388 | INFO     | all payload control threads have been joined
[2025-04-19 02:01:14] 2025-04-19 06:00:58,579 | INFO     | [job] retrieve thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:58,580 | INFO     | [job] queue monitor thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:58,583 | INFO     | [data] control thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:58,814 | INFO     | [payload] failed_post thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:58,942 | INFO     | all job control threads have been joined
[2025-04-19 02:01:14] 2025-04-19 06:00:58,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 02:01:14] 2025-04-19 06:00:59,249 | INFO     | [job] job monitor thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:59,343 | INFO     | [job] validate thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:59,394 | INFO     | [payload] control thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:59,401 | INFO     | [payload] validate_post thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:59,522 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:59,711 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:59,899 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:00:59,948 | INFO     | [job] control thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:01:00,020 | INFO     | [data] copytool_in thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:01:00,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 02:01:14] 2025-04-19 06:01:00,967 | INFO     | [data] copytool_out thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:01:04,156 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:01:07,653 | INFO     | job.realtimelogging is not enabled
[2025-04-19 02:01:14] 2025-04-19 06:01:08,659 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 02:01:14] 2025-04-19 06:01:08,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402309613376)>', '<ExcThread(monitor, started 140401692350208)>']
[2025-04-19 02:01:14] 2025-04-19 06:01:08,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 02:01:14] 2025-04-19 06:01:08,978 | INFO     | [monitor] control thread has ended
[2025-04-19 02:01:14] 2025-04-19 06:01:13,848 | INFO     | all workflow threads have been joined
[2025-04-19 02:01:14] 2025-04-19 06:01:13,848 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 02:01:14] 2025-04-19 06:01:13,849 | INFO     | traces error code: 0
[2025-04-19 02:01:14] 2025-04-19 06:01:13,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 02:01:14] 2025-04-19 06:01:13,936 [wrapper] ==== pilot stdout END ====
[2025-04-19 02:01:14] 2025-04-19 06:01:13,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 02:01:14] 2025-04-19 06:01:13,944 [wrapper] pilotpid: 27782
[2025-04-19 02:01:14] 2025-04-19 06:01:13,948 [wrapper] Pilot exit status: 0
[2025-04-19 02:01:14] 2025-04-19 06:01:13,964 [wrapper] pandaids: 6606682563
[2025-04-19 02:01:14] 2025-04-19 06:01:14,003 [wrapper] cleanup supervisor_pilot 18773 27783
[2025-04-19 02:01:14] 2025-04-19 06:01:14,007 [wrapper] Test setup, not cleaning
[2025-04-19 02:01:14] 2025-04-19 06:01:14,011 [wrapper] apfmon messages muted
[2025-04-19 02:01:14] 2025-04-19 06:01:14,015 [wrapper] ==== wrapper stdout END ====
[2025-04-19 02:01:14] 2025-04-19 06:01:14,019 [wrapper] ==== wrapper stderr END ====
[2025-04-19 02:01:14]  *** Error codes and diagnostics ***
[2025-04-19 02:01:14]     "exeErrorCode": 0,
[2025-04-19 02:01:14]     "exeErrorDiag": "",
[2025-04-19 02:01:14]     "pilotErrorCode": 0,
[2025-04-19 02:01:14]     "pilotErrorDiag": "",
[2025-04-19 02:01:14]  *** Listing of results directory ***
[2025-04-19 02:01:14] total 421688
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 13:12 pilot3.tar.gz
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 13:15 queuedata.json
[2025-04-19 02:01:14] -rwx------ 1 boincer umatlas     37140 Apr 18 13:16 runpilot2-wrapper.sh
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas       100 Apr 19 00:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 02:01:14] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 00:36 run_atlas
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas       105 Apr 19 00:36 job.xml
[2025-04-19 02:01:14] -rw-r--r-- 2 boincer umatlas 227458590 Apr 19 00:36 EVNT.44075481._002796.pool.root.1
[2025-04-19 02:01:14] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 00:36 start_atlas.sh
[2025-04-19 02:01:14] drwxrwx--x 2 boincer umatlas      4096 Apr 19 00:36 shared
[2025-04-19 02:01:14] -rw-r--r-- 2 boincer umatlas    508896 Apr 19 00:36 input.tar.gz
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas         0 Apr 19 00:36 boinc_lockfile
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas      2575 Apr 19 00:36 pandaJob.out
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas       424 Apr 19 00:36 setup.sh.local
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas    991292 Apr 19 00:36 agis_schedconf.cvmfs.json
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas   1618536 Apr 19 00:36 agis_ddmendpoints.agis.ALL.json
[2025-04-19 02:01:14] drwx------ 4 boincer umatlas      4096 Apr 19 00:36 pilot3
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas      5868 Apr 19 01:56 init_data.xml
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas 198818307 Apr 19 02:00 HITS.44075483._071974.pool.root.1
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas        95 Apr 19 02:00 pilot_heartbeat.json
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas       529 Apr 19 02:00 boinc_task_state.xml
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas      1049 Apr 19 02:00 memory_monitor_summary.json
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas    352908 Apr 19 02:00 log.44075483._071974.job.log.tgz.1
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas      7747 Apr 19 02:00 heartbeat.json
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 02:01 boinc_mmap_file
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas        27 Apr 19 02:01 wrapper_checkpoint.txt
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas      4425 Apr 19 02:01 pilotlog.txt
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas    478888 Apr 19 02:01 log.44075483._071974.job.log.1
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas       357 Apr 19 02:01 output.list
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas       620 Apr 19 02:01 runtime_log
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas    849920 Apr 19 02:01 result.tar.gz
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 02:01 runtime_log.err
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas       658 Apr 19 02:01 IDLNDm1U4P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCO5KDmx2gWfm.diag
[2025-04-19 02:01:14] -rw-r--r-- 1 boincer umatlas     21256 Apr 19 02:01 stderr.txt
[2025-04-19 02:01:14] HITS file was successfully produced:
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas 198818307 Apr 19 02:00 shared/HITS.pool.root.1
[2025-04-19 02:01:14]  *** Contents of shared directory: ***
[2025-04-19 02:01:14] total 417648
[2025-04-19 02:01:14] -rw-r--r-- 2 boincer umatlas 227458590 Apr 19 00:36 ATLAS.root_0
[2025-04-19 02:01:14] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 00:36 start_atlas.sh
[2025-04-19 02:01:14] -rw-r--r-- 2 boincer umatlas    508896 Apr 19 00:36 input.tar.gz
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas 198818307 Apr 19 02:00 HITS.pool.root.1
[2025-04-19 02:01:14] -rw------- 1 boincer umatlas    849920 Apr 19 02:01 result.tar.gz
02:01:15 (24181): run_atlas exited; CPU time 47927.527719
02:01:15 (24181): called boinc_finish(0)

</stderr_txt>
]]>

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