Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:59:00 (3408129): wrapper (7.7.26015): starting
18:59:00 (3408129): wrapper: running run_atlas (--nthreads 4)
[2025-04-20 18:59:00] Arguments: --nthreads 4
[2025-04-20 18:59:00] Threads: 4
[2025-04-20 18:59:00] Checking for CVMFS
[2025-04-20 18:59:00] No cvmfs_config command found, will try listing directly
[2025-04-20 18:59:00] CVMFS is ok
[2025-04-20 18:59:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 18:59:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 18:59:00] Further information can be found at the LHC@home message board.
[2025-04-20 18:59:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 18:59:00] Checking for apptainer binary...
[2025-04-20 18:59:00] which: no apptainer in ((null))
[2025-04-20 18:59:00] apptainer is not installed, using version from CVMFS
[2025-04-20 18:59:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 18:59:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-04-20 18:59:00] apptainer works
[2025-04-20 18:59:00] Set ATHENA_PROC_NUMBER=4
[2025-04-20 18:59:00] Set ATHENA_CORE_NUMBER=4
[2025-04-20 18:59:00] Starting ATLAS job with PandaID=6606935214
[2025-04-20 18:59:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 19:01:52]  *** The last 200 lines of the pilot log: ***
[2025-04-20 19:01:52] 2025-04-20 17:01:39,917 | INFO     | memory information not available: 'Max'
[2025-04-20 19:01:52] 2025-04-20 17:01:39,917 | WARNING  | found no stored workdir sizes
[2025-04-20 19:01:52] 2025-04-20 17:01:39,917 | INFO     | will not add max space = 0 B to job metrics
[2025-04-20 19:01:52] 2025-04-20 17:01:39,918 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2025-04-20 19:01:52] 2025-04-20 17:01:39,918 | INFO     | ..............................
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . Timing measurements:
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . get job = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . initial setup = 1 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . payload setup = 2 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . stage-in = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . payload execution = 3 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . stage-out = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . log creation = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | ..............................
[2025-04-20 19:01:52] 2025-04-20 17:01:39,920 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-20 19:01:52] 2025-04-20 17:01:39,920 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6606935214/pilotlog.txt
[2025-04-20 19:01:52] 2025-04-20 17:01:39,932 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-20 19:01:52] - Log from pilotlog.txt -
[2025-04-20 19:01:52] 2025-04-20 17:01:38,815 | INFO     | monitor loop #53: job 0:6606935214 is in state 'failed'
[2025-04-20 19:01:52] 2025-04-20 17:01:38,816 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-20 19:01:52] 2025-04-20 17:01:39,915 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 19:01:52] 2025-04-20 17:01:39,916 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6606935214/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 19:01:52] 2025-04-20 17:01:39,917 | INFO     | memory information not available: 'Max'
[2025-04-20 19:01:52] 2025-04-20 17:01:39,917 | WARNING  | found no stored workdir sizes
[2025-04-20 19:01:52] 2025-04-20 17:01:39,917 | INFO     | will not add max space = 0 B to job metrics
[2025-04-20 19:01:52] 2025-04-20 17:01:39,918 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2025-04-20 19:01:52] 2025-04-20 17:01:39,918 | INFO     | ..............................
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . Timing measurements:
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . get job = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . initial setup = 1 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . payload setup = 2 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . stage-in = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . payload execution = 3 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . stage-out = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . log creation = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | ..............................
[2025-04-20 19:01:52] 2025-04-20 17:01:39,920 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-20 19:01:52] 2025-04-20 17:01:39,920 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6606935214/pilotlog.txt
[2025-04-20 19:01:52] 2025-04-20 17:01:39,932 | WARNING  | 
[2025-04-20 19:01:52] [begin log extracts]
[2025-04-20 19:01:52] - Log from pilotlog.txt -
[2025-04-20 19:01:52] 2025-04-20 17:01:38,815 | INFO     | monitor loop #53: job 0:6606935214 is in state 'failed'
[2025-04-20 19:01:52] 2025-04-20 17:01:38,816 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-20 19:01:52] 2025-04-20 17:01:39,915 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 19:01:52] 2025-04-20 17:01:39,916 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6606935214/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 19:01:52] 2025-04-20 17:01:39,917 | INFO     | memory information not available: 'Max'
[2025-04-20 19:01:52] 2025-04-20 17:01:39,917 | WARNING  | found no stored workdir sizes
[2025-04-20 19:01:52] 2025-04-20 17:01:39,917 | INFO     | will not add max space = 0 B to job metrics
[2025-04-20 19:01:52] 2025-04-20 17:01:39,918 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2025-04-20 19:01:52] 2025-04-20 17:01:39,918 | INFO     | ..............................
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . Timing measurements:
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . get job = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . initial setup = 1 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . payload setup = 2 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . stage-in = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . payload execution = 3 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . stage-out = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | . log creation = 0 s
[2025-04-20 19:01:52] 2025-04-20 17:01:39,919 | INFO     | ..............................
[2025-04-20 19:01:52] 2025-04-20 17:01:39,920 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-20 19:01:52] 2025-04-20 17:01:39,920 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6606935214/pilotlog.txt
[2025-04-20 19:01:52] [end log extracts]
[2025-04-20 19:01:52] 2025-04-20 17:01:39,933 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2025-04-20 19:01:52] 2025-04-20 17:01:39,934 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Sim_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2025-04-20 19:01:52] 2025-04-20 17:01:40,055 | INFO     | 
[2025-04-20 19:01:52] 2025-04-20 17:01:40,056 | INFO     | job summary report
[2025-04-20 19:01:52] 2025-04-20 17:01:40,056 | INFO     | --------------------------------------------------
[2025-04-20 19:01:52] 2025-04-20 17:01:40,056 | INFO     | PanDA job id: 6606935214
[2025-04-20 19:01:52] 2025-04-20 17:01:40,056 | INFO     | task id: 44178580
[2025-04-20 19:01:52] 2025-04-20 17:01:40,056 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Sim_tf.py: command not found
[2025-04-20 19:01:52] 
[2025-04-20 19:01:52] 2025-04-20 17:01:40,057 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2025-04-20 19:01:52] 2025-04-20 17:01:40,057 | INFO     | pilot error code: 1187
[2025-04-20 19:01:52] 2025-04-20 17:01:40,057 | INFO     | pilot error diag: metadata does not exist: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6606935214/metadata.xml
[2025-04-20 19:01:52] 2025-04-20 17:01:40,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 19:01:52] 2025-04-20 17:01:40,057 | INFO     | pilot state: failed 
[2025-04-20 19:01:52] 2025-04-20 17:01:40,057 | INFO     | transexitcode: 127
[2025-04-20 19:01:52] 2025-04-20 17:01:40,057 | INFO     | exeerrorcode: 0
[2025-04-20 19:01:52] 2025-04-20 17:01:40,057 | INFO     | exeerrordiag: 
[2025-04-20 19:01:52] 2025-04-20 17:01:40,058 | INFO     | exitcode: 0
[2025-04-20 19:01:52] 2025-04-20 17:01:40,058 | INFO     | exitmsg: 
[2025-04-20 19:01:52] 2025-04-20 17:01:40,058 | INFO     | cpuconsumptiontime: 10 s
[2025-04-20 19:01:52] 2025-04-20 17:01:40,058 | INFO     | nevents: 0
[2025-04-20 19:01:52] 2025-04-20 17:01:40,058 | INFO     | neventsw: 0
[2025-04-20 19:01:52] 2025-04-20 17:01:40,058 | INFO     | pid: 3417972
[2025-04-20 19:01:52] 2025-04-20 17:01:40,058 | INFO     | pgrp: 3417972
[2025-04-20 19:01:52] 2025-04-20 17:01:40,058 | INFO     | corecount: 4
[2025-04-20 19:01:52] 2025-04-20 17:01:40,058 | INFO     | event service: False
[2025-04-20 19:01:52] 2025-04-20 17:01:40,059 | INFO     | sizes: {0: 2426806, 4: 2427012, 11: 2435600, 10: 2431351, 13: 2435600, 135: 2435600}
[2025-04-20 19:01:52] 2025-04-20 17:01:40,059 | INFO     | --------------------------------------------------
[2025-04-20 19:01:52] 2025-04-20 17:01:40,059 | INFO     | 
[2025-04-20 19:01:52] 2025-04-20 17:01:40,059 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-04-20 19:01:52] 2025-04-20 17:01:40,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,078 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,078 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,078 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,080 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 19:01:52] 2025-04-20 17:01:40,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,080 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 19:01:52] 2025-04-20 17:01:40,081 | INFO     | job 6606935214 has completed (purged errors)
[2025-04-20 19:01:52] 2025-04-20 17:01:40,081 | INFO     | overall cleanup function is called
[2025-04-20 19:01:52] 2025-04-20 17:01:41,087 | INFO     | --- collectZombieJob: --- 10, [3417972]
[2025-04-20 19:01:52] 2025-04-20 17:01:41,087 | INFO     | zombie collector waiting for pid 3417972
[2025-04-20 19:01:52] 2025-04-20 17:01:41,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 19:01:52] 2025-04-20 17:01:41,088 | INFO     | collected zombie processes
[2025-04-20 19:01:52] 2025-04-20 17:01:41,088 | INFO     | will attempt to kill all subprocesses of pid=3417972
[2025-04-20 19:01:52] 2025-04-20 17:01:41,393 | INFO     | process IDs to be killed: [3417972] (in reverse order)
[2025-04-20 19:01:52] 2025-04-20 17:01:41,483 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 19:01:52] 2025-04-20 17:01:41,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 19:01:52] 2025-04-20 17:01:41,491 | INFO     | did not find any defunct processes belonging to 3417972
[2025-04-20 19:01:52] 2025-04-20 17:01:41,498 | INFO     | did not find any defunct processes belonging to 3417972
[2025-04-20 19:01:52] 2025-04-20 17:01:41,498 | INFO     | ready for new job
[2025-04-20 19:01:52] 2025-04-20 17:01:41,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 19:01:52] 2025-04-20 17:01:41,500 | INFO     | **************************************
[2025-04-20 19:01:52] 2025-04-20 17:01:41,500 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 19:01:52] 2025-04-20 17:01:41,500 | INFO     | **************************************
[2025-04-20 19:01:52] 2025-04-20 17:01:41,500 | INFO     | 
[2025-04-20 19:01:52] 2025-04-20 17:01:41,503 | INFO     | architecture information:
[2025-04-20 19:01:52] 2025-04-20 17:01:41,503 | INFO     | executing command: cat /etc/os-release
[2025-04-20 19:01:52] 2025-04-20 17:01:41,518 | INFO     | cat /etc/os-release:
[2025-04-20 19:01:52] NAME="CentOS Linux"
[2025-04-20 19:01:52] VERSION="7 (Core)"
[2025-04-20 19:01:52] ID="centos"
[2025-04-20 19:01:52] ID_LIKE="rhel fedora"
[2025-04-20 19:01:52] VERSION_ID="7"
[2025-04-20 19:01:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 19:01:52] ANSI_COLOR="0;31"
[2025-04-20 19:01:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 19:01:52] HOME_URL="https://www.centos.org/"
[2025-04-20 19:01:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 19:01:52] 
[2025-04-20 19:01:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 19:01:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 19:01:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 19:01:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 19:01:52] 
[2025-04-20 19:01:52] 2025-04-20 17:01:41,519 | INFO     | **************************************
[2025-04-20 19:01:52] 2025-04-20 17:01:42,023 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-04-20 19:01:52] 2025-04-20 17:01:42,039 | INFO     | sufficient remaining disk space (1644652658688 B)
[2025-04-20 19:01:52] 2025-04-20 17:01:42,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 19:01:52] 2025-04-20 17:01:42,040 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 19:01:52] 2025-04-20 17:01:42,040 | INFO     | update_server=False
[2025-04-20 19:01:52] 2025-04-20 17:01:42,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 19:01:52] 2025-04-20 17:01:42,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 19:01:52] 2025-04-20 17:01:42,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 19:01:52] 2025-04-20 17:01:42,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 19:01:52] 2025-04-20 17:01:42,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 19:01:52] 2025-04-20 17:01:42,324 | INFO     | aborting loop
[2025-04-20 19:01:52] 2025-04-20 17:01:42,590 | INFO     | all payload control threads have been joined
[2025-04-20 19:01:52] 2025-04-20 17:01:42,592 | INFO     | all data control threads have been joined
[2025-04-20 19:01:52] 2025-04-20 17:01:42,664 | INFO     | all job control threads have been joined
[2025-04-20 19:01:52] 2025-04-20 17:01:42,836 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 19:01:52] 2025-04-20 17:01:42,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 19:01:52] 2025-04-20 17:01:42,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 19:01:52] 2025-04-20 17:01:43,046 | INFO     | [job] retrieve thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:43,047 | INFO     | [job] queue monitor thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:43,061 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:43,330 | INFO     | [job] job monitor thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:43,519 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:43,595 | INFO     | [payload] control thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:43,597 | INFO     | [data] control thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:43,670 | INFO     | [job] control thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:43,785 | INFO     | [payload] validate_post thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:43,959 | INFO     | [data] copytool_in thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:44,035 | INFO     | [job] validate thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:44,047 | INFO     | [data] copytool_out thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:44,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:44,329 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:44,464 | INFO     | [payload] failed_post thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:46,047 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 19:01:52] 2025-04-20 17:01:46,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23160508356416)>', '<ExcThread(monitor, started 23160059561728)>']
[2025-04-20 19:01:52] 2025-04-20 17:01:46,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 19:01:52] 2025-04-20 17:01:46,853 | INFO     | [monitor] control thread has ended
[2025-04-20 19:01:52] 2025-04-20 17:01:51,794 | INFO     | all workflow threads have been joined
[2025-04-20 19:01:52] 2025-04-20 17:01:51,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 19:01:52] 2025-04-20 17:01:51,794 | INFO     | traces error code: 0
[2025-04-20 19:01:52] 2025-04-20 17:01:51,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 19:01:52] 2025-04-20 17:01:51,925 [wrapper] ==== pilot stdout END ====
[2025-04-20 19:01:52] 2025-04-20 17:01:51,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 19:01:52] 2025-04-20 17:01:51,930 [wrapper] pilotpid: 3411763
[2025-04-20 19:01:52] 2025-04-20 17:01:51,932 [wrapper] Pilot exit status: 0
[2025-04-20 19:01:52] 2025-04-20 17:01:51,940 [wrapper] pandaids: 6606935214
[2025-04-20 19:01:52] 2025-04-20 17:01:51,990 [wrapper] cleanup supervisor_pilot 3411769 3411764
[2025-04-20 19:01:52] 2025-04-20 17:01:51,993 [wrapper] Test setup, not cleaning
[2025-04-20 19:01:52] 2025-04-20 17:01:51,995 [wrapper] apfmon messages muted
[2025-04-20 19:01:52] 2025-04-20 17:01:51,998 [wrapper] ==== wrapper stdout END ====
[2025-04-20 19:01:52] 2025-04-20 17:01:52,001 [wrapper] ==== wrapper stderr END ====
[2025-04-20 19:01:52]  *** Error codes and diagnostics ***
[2025-04-20 19:01:52]     "exeErrorCode": 0,
[2025-04-20 19:01:52]     "exeErrorDiag": "",
[2025-04-20 19:01:52]     "pilotErrorCode": 1305,
[2025-04-20 19:01:52]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2025-04-20 19:01:52]  *** Listing of results directory ***
[2025-04-20 19:01:52] total 318792
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc    495897 Apr 18 23:39 pilot3.tar.gz
[2025-04-20 19:01:52] -rwx------ 1 boinc boinc     37140 Apr 19 00:05 runpilot2-wrapper.sh
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc      5111 Apr 19 00:05 queuedata.json
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc       100 Apr 20 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 19:01:52] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 18:58 run_atlas
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc       105 Apr 20 18:58 job.xml
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc      6421 Apr 20 18:59 init_data.xml
[2025-04-20 19:01:52] -rw-r--r-- 2 boinc boinc 322429304 Apr 20 18:59 EVNT.44178578._000001.pool.root.1
[2025-04-20 19:01:52] drwxrwx--x 2 boinc boinc      4096 Apr 20 18:59 shared
[2025-04-20 19:01:52] -rw-r--r-- 2 boinc boinc    508859 Apr 20 18:59 input.tar.gz
[2025-04-20 19:01:52] -rw-r--r-- 2 boinc boinc     17569 Apr 20 18:59 start_atlas.sh
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc         0 Apr 20 18:59 boinc_lockfile
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc      2560 Apr 20 18:59 pandaJob.out
[2025-04-20 19:01:52] -rw------- 1 boinc boinc       424 Apr 20 18:59 setup.sh.local
[2025-04-20 19:01:52] -rw------- 1 boinc boinc    991292 Apr 20 18:59 agis_schedconf.cvmfs.json
[2025-04-20 19:01:52] -rw------- 1 boinc boinc   1618536 Apr 20 18:59 agis_ddmendpoints.agis.ALL.json
[2025-04-20 19:01:52] drwx------ 4 boinc boinc      4096 Apr 20 18:59 pilot3
[2025-04-20 19:01:52] -rw------- 1 boinc boinc       282 Apr 20 18:59 memory_monitor_summary.json
[2025-04-20 19:01:52] -rw------- 1 boinc boinc      7586 Apr 20 18:59 log.44178580._000004.job.log.tgz.1
[2025-04-20 19:01:52] -rw------- 1 boinc boinc        95 Apr 20 19:01 pilot_heartbeat.json
[2025-04-20 19:01:52] -rw------- 1 boinc boinc      2192 Apr 20 19:01 heartbeat.json
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc       520 Apr 20 19:01 boinc_task_state.xml
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc      8192 Apr 20 19:01 boinc_mmap_file
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc        22 Apr 20 19:01 wrapper_checkpoint.txt
[2025-04-20 19:01:52] -rw------- 1 boinc boinc      4364 Apr 20 19:01 pilotlog.txt
[2025-04-20 19:01:52] -rw------- 1 boinc boinc     73410 Apr 20 19:01 log.44178580._000004.job.log.1
[2025-04-20 19:01:52] -rw------- 1 boinc boinc       188 Apr 20 19:01 output.list
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc       620 Apr 20 19:01 runtime_log
[2025-04-20 19:01:52] -rw------- 1 boinc boinc     92160 Apr 20 19:01 result.tar.gz
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc     11270 Apr 20 19:01 runtime_log.err
[2025-04-20 19:01:52] -rw------- 1 boinc boinc       647 Apr 20 19:01 0OhMDmA18P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmqGgLDmrawR0n.diag
[2025-04-20 19:01:52] -rw-r--r-- 1 boinc boinc     21084 Apr 20 19:01 stderr.txt
[2025-04-20 19:01:52] No HITS result produced
[2025-04-20 19:01:52]  *** Contents of shared directory: ***
[2025-04-20 19:01:52] total 315492
[2025-04-20 19:01:52] -rw-r--r-- 2 boinc boinc 322429304 Apr 20 18:59 ATLAS.root_0
[2025-04-20 19:01:52] -rw-r--r-- 2 boinc boinc    508859 Apr 20 18:59 input.tar.gz
[2025-04-20 19:01:52] -rw-r--r-- 2 boinc boinc     17569 Apr 20 18:59 start_atlas.sh
[2025-04-20 19:01:52] -rw------- 1 boinc boinc     92160 Apr 20 19:01 result.tar.gz
19:01:53 (3408129): run_atlas exited; CPU time 18.661458
19:01:53 (3408129): called boinc_finish(0)

</stderr_txt>
]]>

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