Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:44:52 (2983940): wrapper (7.7.26015): starting
08:44:52 (2983940): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 08:44:52] Arguments: --nthreads 12
[2025-04-19 08:44:52] Threads: 12
[2025-04-19 08:44:52] Checking for CVMFS
[2025-04-19 08:44:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 08:44:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 08:44:53] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 08:44:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 08:44:53] 2.12.7.0 2534634 20139 264296 145029 0 189 31144400 46080001 6132 130560 0 198249263 99.935 37226503 4485 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-19 08:44:53] CVMFS is ok
[2025-04-19 08:44:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 08:44:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 08:44:53] Further information can be found at the LHC@home message board.
[2025-04-19 08:44:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 08:44:53] Checking for apptainer binary...
[2025-04-19 08:44:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 08:44:53] Running /usr/bin/apptainer --version
[2025-04-19 08:44:53] apptainer version 1.4.0-1.el9
[2025-04-19 08:44:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 08:44:53] mff2103.farm.particle.cz
[2025-04-19 08:44:53] apptainer works
[2025-04-19 08:44:53] Set ATHENA_PROC_NUMBER=12
[2025-04-19 08:44:53] Set ATHENA_CORE_NUMBER=12
[2025-04-19 08:44:53] Starting ATLAS job with PandaID=6606555077
[2025-04-19 08:44:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 09:40:23]  *** The last 200 lines of the pilot log: ***
[2025-04-19 09:40:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 09:40:23]  is_altstaged=None
[2025-04-19 09:40:23]  is_tar=False
[2025-04-19 09:40:23]  lfn=log.44075483._070567.job.log.tgz.1
[2025-04-19 09:40:23]  mtime=0
[2025-04-19 09:40:23]  protocol_id=None
[2025-04-19 09:40:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 09:40:23]  replicas=None
[2025-04-19 09:40:23]  scope=mc23_13p6TeV
[2025-04-19 09:40:23]  status=None
[2025-04-19 09:40:23]  status_code=0
[2025-04-19 09:40:23]  storage_token=
[2025-04-19 09:40:23]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6606555077/log.44075483._070567.job.log.tgz.1
[2025-04-19 09:40:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/79/log.44075483._070567.job.log.tgz.1
[2025-04-19 09:40:23]  workdir=None
[2025-04-19 09:40:23] ]
[2025-04-19 09:40:23] 2025-04-19 07:39:56,767 | INFO     | transferring file log.44075483._070567.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6606555077/log.44075483._070567.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-19 09:40:23] 2025-04-19 07:39:56,767 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6606555077/log.44075483._070567.job.log.tgz.1 /scratch/.boinc/slots/1/log.44075483._070567.j
[2025-04-19 09:40:23] 2025-04-19 07:39:56,794 | INFO     | adding to output.list: log.44075483._070567.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/79/log.44075483._070567.job.log.tg
[2025-04-19 09:40:23] 2025-04-19 07:39:56,795 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 09:40:23] 2025-04-19 07:39:56,795 | INFO     | summary of transferred files:
[2025-04-19 09:40:23] 2025-04-19 07:39:56,795 | INFO     |  -- lfn=log.44075483._070567.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 09:40:23] 2025-04-19 07:39:56,795 | INFO     | stage-out finished correctly
[2025-04-19 09:40:23] 2025-04-19 07:39:57,741 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 09:40:23] 2025-04-19 07:39:58,268 | WARNING  | process 2995359 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 09:40:23] 2025-04-19 07:39:58,269 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6606555077/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 09:40:23] 2025-04-19 07:39:58,494 | INFO     | job 6606555077 has state=finished
[2025-04-19 09:40:23] 2025-04-19 07:39:58,494 | INFO     | preparing for final server update for job 6606555077 in state='finished'
[2025-04-19 09:40:23] 2025-04-19 07:39:58,495 | INFO     | this job has now completed (state=finished)
[2025-04-19 09:40:23] 2025-04-19 07:39:58,495 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 09:40:23] 2025-04-19 07:39:58,495 | INFO     | log transfer has been attempted: DONE
[2025-04-19 09:40:23] 2025-04-19 07:39:58,495 | INFO     | job 6606555077 has finished - writing final server update
[2025-04-19 09:40:23] 2025-04-19 07:39:58,496 | INFO     | total number of processed events: 400 (read)
[2025-04-19 09:40:23] 2025-04-19 07:39:58,504 | INFO     | executing command: lscpu
[2025-04-19 09:40:23] 2025-04-19 07:39:58,597 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 09:40:23] 2025-04-19 07:39:58,635 | INFO     | number of running child processes to parent process 2995359: 1
[2025-04-19 09:40:23] 2025-04-19 07:39:58,636 | INFO     | maximum number of monitored processes: 6
[2025-04-19 09:40:23] 2025-04-19 07:40:01,138 | INFO     | monitor loop #245: job 0:6606555077 is in state 'finished'
[2025-04-19 09:40:23] 2025-04-19 07:40:01,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:40:23] 2025-04-19 07:40:02,837 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 09:40:23] 2025-04-19 07:40:02,838 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6606555077/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 09:40:23] 2025-04-19 07:40:02,838 | INFO     | extracted standard info from prmon json
[2025-04-19 09:40:23] 2025-04-19 07:40:02,838 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 09:40:23] 2025-04-19 07:40:02,838 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 09:40:23] 2025-04-19 07:40:02,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 09:40:23] 2025-04-19 07:40:02,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | fitting pss+swap vs Time
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | sum of square deviations: 32179208.0
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | sum of deviations: 12251797601.0
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | mean x: 1745046839.0
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | mean y: 2489147.234042553
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | -- intersect: -664400459355.8129
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | intersect: -664400459355.8129
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | chi2: 1.7395086424614585
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | -- intersect: -664400459355.8129
[2025-04-19 09:40:23] 2025-04-19 07:40:02,840 | INFO     | current memory leak: 380.74 B/s (using 47 data points, chi2=1.74)
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | ..............................
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | . Timing measurements:
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | . get job = 0 s
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | . initial setup = 1 s
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | . payload setup = 6 s
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | . stage-in = 0 s
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | . payload execution = 3265 s
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | . stage-out = 0 s
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | . log creation = 0 s
[2025-04-19 09:40:23] 2025-04-19 07:40:02,841 | INFO     | ..............................
[2025-04-19 09:40:23] 2025-04-19 07:40:02,908 | INFO     | 
[2025-04-19 09:40:23] 2025-04-19 07:40:02,908 | INFO     | job summary report
[2025-04-19 09:40:23] 2025-04-19 07:40:02,908 | INFO     | --------------------------------------------------
[2025-04-19 09:40:23] 2025-04-19 07:40:02,908 | INFO     | PanDA job id: 6606555077
[2025-04-19 09:40:23] 2025-04-19 07:40:02,908 | INFO     | task id: 44075483
[2025-04-19 09:40:23] 2025-04-19 07:40:02,908 | INFO     | errors: (none)
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | pilot state: finished 
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | transexitcode: 0
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | exeerrorcode: 0
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | exeerrordiag: 
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | exitcode: 0
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | exitmsg: OK
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | cpuconsumptiontime: 28288 s
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | nevents: 400
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | neventsw: 0
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | pid: 2995359
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | pgrp: 2995359
[2025-04-19 09:40:23] 2025-04-19 07:40:02,909 | INFO     | corecount: 12
[2025-04-19 09:40:23] 2025-04-19 07:40:02,910 | INFO     | event service: False
[2025-04-19 09:40:23] 2025-04-19 07:40:02,910 | INFO     | sizes: {0: 2426654, 1: 2426853, 6: 2427059, 11: 2427087, 3275: 2452608, 3277: 2461551, 3278: 2461735, 3283: 2461905}
[2025-04-19 09:40:23] 2025-04-19 07:40:02,910 | INFO     | --------------------------------------------------
[2025-04-19 09:40:23] 2025-04-19 07:40:02,910 | INFO     | 
[2025-04-19 09:40:23] 2025-04-19 07:40:02,910 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-04-19 09:40:23] 2025-04-19 07:40:02,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,932 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,933 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 09:40:23] 2025-04-19 07:40:02,934 | INFO     | job 6606555077 has completed (purged errors)
[2025-04-19 09:40:23] 2025-04-19 07:40:02,934 | INFO     | overall cleanup function is called
[2025-04-19 09:40:23] 2025-04-19 07:40:03,941 | INFO     | --- collectZombieJob: --- 10, [2995359]
[2025-04-19 09:40:23] 2025-04-19 07:40:03,942 | INFO     | zombie collector waiting for pid 2995359
[2025-04-19 09:40:23] 2025-04-19 07:40:03,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 09:40:23] 2025-04-19 07:40:03,942 | INFO     | collected zombie processes
[2025-04-19 09:40:23] 2025-04-19 07:40:03,942 | INFO     | will attempt to kill all subprocesses of pid=2995359
[2025-04-19 09:40:23] 2025-04-19 07:40:04,280 | INFO     | process IDs to be killed: [2995359] (in reverse order)
[2025-04-19 09:40:23] 2025-04-19 07:40:04,393 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 09:40:23] 2025-04-19 07:40:04,393 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 09:40:23] 2025-04-19 07:40:04,405 | INFO     | did not find any defunct processes belonging to 2995359
[2025-04-19 09:40:23] 2025-04-19 07:40:04,414 | INFO     | did not find any defunct processes belonging to 2995359
[2025-04-19 09:40:23] 2025-04-19 07:40:04,414 | INFO     | ready for new job
[2025-04-19 09:40:23] 2025-04-19 07:40:04,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 09:40:23] 2025-04-19 07:40:04,416 | INFO     | **************************************
[2025-04-19 09:40:23] 2025-04-19 07:40:04,416 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 09:40:23] 2025-04-19 07:40:04,416 | INFO     | **************************************
[2025-04-19 09:40:23] 2025-04-19 07:40:04,416 | INFO     | 
[2025-04-19 09:40:23] 2025-04-19 07:40:04,422 | INFO     | architecture information:
[2025-04-19 09:40:23] 2025-04-19 07:40:04,422 | INFO     | executing command: cat /etc/os-release
[2025-04-19 09:40:23] 2025-04-19 07:40:04,442 | INFO     | cat /etc/os-release:
[2025-04-19 09:40:23] NAME="CentOS Linux"
[2025-04-19 09:40:23] VERSION="7 (Core)"
[2025-04-19 09:40:23] ID="centos"
[2025-04-19 09:40:23] ID_LIKE="rhel fedora"
[2025-04-19 09:40:23] VERSION_ID="7"
[2025-04-19 09:40:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 09:40:23] ANSI_COLOR="0;31"
[2025-04-19 09:40:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 09:40:23] HOME_URL="https://www.centos.org/"
[2025-04-19 09:40:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 09:40:23] 
[2025-04-19 09:40:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 09:40:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 09:40:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 09:40:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 09:40:23] 
[2025-04-19 09:40:23] 2025-04-19 07:40:04,442 | INFO     | **************************************
[2025-04-19 09:40:23] 2025-04-19 07:40:04,945 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-04-19 09:40:23] 2025-04-19 07:40:05,047 | INFO     | sufficient remaining disk space (1680906125312 B)
[2025-04-19 09:40:23] 2025-04-19 07:40:05,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 09:40:23] 2025-04-19 07:40:05,048 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 09:40:23] 2025-04-19 07:40:05,048 | INFO     | update_server=False
[2025-04-19 09:40:23] 2025-04-19 07:40:05,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 09:40:23] 2025-04-19 07:40:05,049 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 09:40:23] 2025-04-19 07:40:05,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 09:40:23] 2025-04-19 07:40:05,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:40:23] 2025-04-19 07:40:05,050 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 09:40:23] 2025-04-19 07:40:05,050 | INFO     | aborting loop
[2025-04-19 09:40:23] 2025-04-19 07:40:05,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 09:40:23] 2025-04-19 07:40:05,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 09:40:23] 2025-04-19 07:40:06,054 | INFO     | [job] retrieve thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:06,056 | INFO     | [job] job monitor thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:06,076 | INFO     | all payload control threads have been joined
[2025-04-19 09:40:23] 2025-04-19 07:40:06,093 | INFO     | all data control threads have been joined
[2025-04-19 09:40:23] 2025-04-19 07:40:06,363 | INFO     | [job] validate thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:06,438 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:06,652 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:06,688 | INFO     | all job control threads have been joined
[2025-04-19 09:40:23] 2025-04-19 07:40:06,794 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:06,963 | INFO     | [payload] failed_post thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:07,055 | INFO     | [data] copytool_out thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:07,082 | INFO     | [payload] control thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:07,098 | INFO     | [data] control thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:07,385 | INFO     | [payload] validate_post thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:07,524 | INFO     | [data] copytool_in thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:07,694 | INFO     | [job] control thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:07,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:40:23] 2025-04-19 07:40:08,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 09:40:23] 2025-04-19 07:40:08,922 | INFO     | [job] queue monitor thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:12,343 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:15,120 | INFO     | job.realtimelogging is not enabled
[2025-04-19 09:40:23] 2025-04-19 07:40:16,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 09:40:23] 2025-04-19 07:40:17,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166765299520)>', '<ExcThread(monitor, started 140166031197952)>']
[2025-04-19 09:40:23] 2025-04-19 07:40:18,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 09:40:23] 2025-04-19 07:40:18,114 | INFO     | [monitor] control thread has ended
[2025-04-19 09:40:23] 2025-04-19 07:40:22,863 | INFO     | all workflow threads have been joined
[2025-04-19 09:40:23] 2025-04-19 07:40:22,863 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 09:40:23] 2025-04-19 07:40:22,864 | INFO     | traces error code: 0
[2025-04-19 09:40:23] 2025-04-19 07:40:22,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 09:40:23] 2025-04-19 07:40:22,998 [wrapper] ==== pilot stdout END ====
[2025-04-19 09:40:23] 2025-04-19 07:40:23,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 09:40:23] 2025-04-19 07:40:23,005 [wrapper] pilotpid: 2987970
[2025-04-19 09:40:23] 2025-04-19 07:40:23,009 [wrapper] Pilot exit status: 0
[2025-04-19 09:40:23] 2025-04-19 07:40:23,021 [wrapper] pandaids: 6606555077
[2025-04-19 09:40:23] 2025-04-19 07:40:23,100 [wrapper] cleanup supervisor_pilot 3287810 2987971
[2025-04-19 09:40:23] 2025-04-19 07:40:23,105 [wrapper] Test setup, not cleaning
[2025-04-19 09:40:23] 2025-04-19 07:40:23,108 [wrapper] apfmon messages muted
[2025-04-19 09:40:23] 2025-04-19 07:40:23,112 [wrapper] ==== wrapper stdout END ====
[2025-04-19 09:40:23] 2025-04-19 07:40:23,115 [wrapper] ==== wrapper stderr END ====
[2025-04-19 09:40:23]  *** Error codes and diagnostics ***
[2025-04-19 09:40:23]     "exeErrorCode": 0,
[2025-04-19 09:40:23]     "exeErrorDiag": "",
[2025-04-19 09:40:23]     "pilotErrorCode": 0,
[2025-04-19 09:40:23]     "pilotErrorDiag": "",
[2025-04-19 09:40:23]  *** Listing of results directory ***
[2025-04-19 09:40:23] total 414824
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc    495897 Apr 18 16:26 pilot3.tar.gz
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc      5111 Apr 18 17:02 queuedata.json
[2025-04-19 09:40:23] -rwx------ 1 boinc boinc     37140 Apr 18 17:02 runpilot2-wrapper.sh
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc       100 Apr 19 08:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 09:40:23] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 08:44 run_atlas
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc       105 Apr 19 08:44 job.xml
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc      6654 Apr 19 08:44 init_data.xml
[2025-04-19 09:40:23] -rw-r--r-- 2 boinc boinc 225169897 Apr 19 08:44 EVNT.44075481._002742.pool.root.1
[2025-04-19 09:40:23] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:44 start_atlas.sh
[2025-04-19 09:40:23] drwxrwx--x 2 boinc boinc      4096 Apr 19 08:44 shared
[2025-04-19 09:40:23] -rw-r--r-- 2 boinc boinc    508892 Apr 19 08:44 input.tar.gz
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc         0 Apr 19 08:44 boinc_lockfile
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc      2579 Apr 19 08:44 pandaJob.out
[2025-04-19 09:40:23] -rw------- 1 boinc boinc       424 Apr 19 08:44 setup.sh.local
[2025-04-19 09:40:23] -rw------- 1 boinc boinc    991292 Apr 19 08:45 agis_schedconf.cvmfs.json
[2025-04-19 09:40:23] -rw------- 1 boinc boinc   1618536 Apr 19 08:45 agis_ddmendpoints.agis.ALL.json
[2025-04-19 09:40:23] drwx------ 4 boinc boinc      4096 Apr 19 08:45 pilot3
[2025-04-19 09:40:23] -rw------- 1 boinc boinc        95 Apr 19 09:39 pilot_heartbeat.json
[2025-04-19 09:40:23] -rw------- 1 boinc boinc 194385820 Apr 19 09:39 HITS.44075483._070567.pool.root.1
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc       529 Apr 19 09:39 boinc_task_state.xml
[2025-04-19 09:40:23] -rw------- 1 boinc boinc      1023 Apr 19 09:39 memory_monitor_summary.json
[2025-04-19 09:40:23] -rw------- 1 boinc boinc    342226 Apr 19 09:39 log.44075483._070567.job.log.tgz.1
[2025-04-19 09:40:23] -rw------- 1 boinc boinc      7698 Apr 19 09:40 heartbeat.json
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc      8192 Apr 19 09:40 boinc_mmap_file
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc        27 Apr 19 09:40 wrapper_checkpoint.txt
[2025-04-19 09:40:23] -rw------- 1 boinc boinc      4551 Apr 19 09:40 pilotlog.txt
[2025-04-19 09:40:23] -rw------- 1 boinc boinc    339121 Apr 19 09:40 log.44075483._070567.job.log.1
[2025-04-19 09:40:23] -rw------- 1 boinc boinc       357 Apr 19 09:40 output.list
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc       620 Apr 19 09:40 runtime_log
[2025-04-19 09:40:23] -rw------- 1 boinc boinc    696320 Apr 19 09:40 result.tar.gz
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc     11078 Apr 19 09:40 runtime_log.err
[2025-04-19 09:40:23] -rw------- 1 boinc boinc       661 Apr 19 09:40 d6uNDm2P2P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgXfLDmkrgTUn.diag
[2025-04-19 09:40:23] -rw-r--r-- 1 boinc boinc     21409 Apr 19 09:40 stderr.txt
[2025-04-19 09:40:23] HITS file was successfully produced:
[2025-04-19 09:40:23] -rw------- 1 boinc boinc 194385820 Apr 19 09:39 shared/HITS.pool.root.1
[2025-04-19 09:40:23]  *** Contents of shared directory: ***
[2025-04-19 09:40:23] total 410932
[2025-04-19 09:40:23] -rw-r--r-- 2 boinc boinc 225169897 Apr 19 08:44 ATLAS.root_0
[2025-04-19 09:40:23] -rw-r--r-- 2 boinc boinc     17569 Apr 19 08:44 start_atlas.sh
[2025-04-19 09:40:23] -rw-r--r-- 2 boinc boinc    508892 Apr 19 08:44 input.tar.gz
[2025-04-19 09:40:23] -rw------- 1 boinc boinc 194385820 Apr 19 09:39 HITS.pool.root.1
[2025-04-19 09:40:23] -rw------- 1 boinc boinc    696320 Apr 19 09:40 result.tar.gz
09:40:25 (2983940): run_atlas exited; CPU time 28350.824885
09:40:25 (2983940): called boinc_finish(0)

</stderr_txt>
]]>

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