Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:06:50 (92962): wrapper (7.7.26015): starting
23:06:50 (92962): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 23:06:50] Arguments: --nthreads 8
[2025-04-18 23:06:50] Threads: 8
[2025-04-18 23:06:50] Checking for CVMFS
[2025-04-18 23:06:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 23:06:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 23:06:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 23:06:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 23:06:51] 2.11.2.0 26290 39158 245376 145023 0 588 17926310 18432000 25594 130560 0 255532207 98.781 646934439 58380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 23:06:51] CVMFS is ok
[2025-04-18 23:06:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 23:06:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 23:06:51] Further information can be found at the LHC@home message board.
[2025-04-18 23:06:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 23:06:51] Checking for apptainer binary...
[2025-04-18 23:06:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 23:06:51] Running /usr/bin/apptainer --version
[2025-04-18 23:06:51] apptainer version 1.3.2-1.el7
[2025-04-18 23:06:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 23:06:53] c-212-2.aglt2.org
[2025-04-18 23:06:53] apptainer works
[2025-04-18 23:06:53] Set ATHENA_PROC_NUMBER=8
[2025-04-18 23:06:53] Set ATHENA_CORE_NUMBER=8
[2025-04-18 23:06:53] Starting ATLAS job with PandaID=6606058818
[2025-04-18 23:06:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 02:41:10]  *** The last 200 lines of the pilot log: ***
[2025-04-19 02:41:10] 2025-04-19 06:40:56,261 | INFO     | mean y: 2375365.1714285715
[2025-04-19 02:41:10] 2025-04-19 06:40:56,261 | INFO     | -- intersect: -73250371571.24934
[2025-04-19 02:41:10] 2025-04-19 06:40:56,261 | INFO     | intersect: -73250371571.24934
[2025-04-19 02:41:10] 2025-04-19 06:40:56,262 | INFO     | chi2: 6.182866519321832
[2025-04-19 02:41:10] 2025-04-19 06:40:56,262 | INFO     | sum of square deviations: 2671327132.878047
[2025-04-19 02:41:10] 2025-04-19 06:40:56,263 | INFO     | sum of deviations: 131112720396.53658
[2025-04-19 02:41:10] 2025-04-19 06:40:56,263 | INFO     | mean x: 1745038283.0243902
[2025-04-19 02:41:10] 2025-04-19 06:40:56,263 | INFO     | mean y: 2383210.092682927
[2025-04-19 02:41:10] 2025-04-19 06:40:56,263 | INFO     | -- intersect: -85646698726.54271
[2025-04-19 02:41:10] 2025-04-19 06:40:56,263 | INFO     | intersect: -85646698726.54271
[2025-04-19 02:41:10] 2025-04-19 06:40:56,263 | INFO     | chi2: 5.423012598823922
[2025-04-19 02:41:10] 2025-04-19 06:40:56,264 | INFO     | current chi2=5.423012598823922 (change=12.289670464716016 %)
[2025-04-19 02:41:10] 2025-04-19 06:40:56,264 | INFO     | right removable region: 204
[2025-04-19 02:41:10] 2025-04-19 06:40:56,264 | INFO     | sum of square deviations: 2671324082.878047
[2025-04-19 02:41:10] 2025-04-19 06:40:56,265 | INFO     | sum of deviations: 66168979606.463425
[2025-04-19 02:41:10] 2025-04-19 06:40:56,265 | INFO     | mean x: 1745038588.0243902
[2025-04-19 02:41:10] 2025-04-19 06:40:56,265 | INFO     | mean y: 2416679.1073170733
[2025-04-19 02:41:10] 2025-04-19 06:40:56,265 | INFO     | -- intersect: -43222373410.41062
[2025-04-19 02:41:10] 2025-04-19 06:40:56,265 | INFO     | intersect: -43222373410.41062
[2025-04-19 02:41:10] 2025-04-19 06:40:56,265 | INFO     | chi2: 3.3460753600495337
[2025-04-19 02:41:10] 2025-04-19 06:40:56,265 | INFO     | current chi2=3.3460753600495337 (change=45.881487986311114 %)
[2025-04-19 02:41:10] 2025-04-19 06:40:56,266 | INFO     | sum of square deviations: 2480584097.874986
[2025-04-19 02:41:10] 2025-04-19 06:40:56,267 | INFO     | sum of deviations: 22084626778.475037
[2025-04-19 02:41:10] 2025-04-19 06:40:56,267 | INFO     | mean x: 1745038740.525
[2025-04-19 02:41:10] 2025-04-19 06:40:56,267 | INFO     | mean y: 2451939.005
[2025-04-19 02:41:10] 2025-04-19 06:40:56,267 | INFO     | -- intersect: -15533618509.680508
[2025-04-19 02:41:10] 2025-04-19 06:40:56,267 | INFO     | intersect: -15533618509.680508
[2025-04-19 02:41:10] 2025-04-19 06:40:56,267 | INFO     | chi2: 1.6182480541992943
[2025-04-19 02:41:10] 2025-04-19 06:40:56,267 | INFO     | current chi2=1.6182480541992943 (change=51.63742952354371 %)
[2025-04-19 02:41:10] 2025-04-19 06:40:56,268 | INFO     | sum of square deviations: 2299146612.8718076
[2025-04-19 02:41:10] 2025-04-19 06:40:56,269 | INFO     | sum of deviations: -4809149532.025641
[2025-04-19 02:41:10] 2025-04-19 06:40:56,269 | INFO     | mean x: 1745038893.025641
[2025-04-19 02:41:10] 2025-04-19 06:40:56,269 | INFO     | mean y: 2474391.405128205
[2025-04-19 02:41:10] 2025-04-19 06:40:56,269 | INFO     | -- intersect: 3652590886.2720523
[2025-04-19 02:41:10] 2025-04-19 06:40:56,269 | INFO     | intersect: 3652590886.2720523
[2025-04-19 02:41:10] 2025-04-19 06:40:56,269 | INFO     | chi2: 0.8217454705958516
[2025-04-19 02:41:10] 2025-04-19 06:40:56,269 | INFO     | current chi2=0.8217454705958516 (change=49.22005507972327 %)
[2025-04-19 02:41:10] 2025-04-19 06:40:56,269 | INFO     | sum of square deviations: 2126779065.3684247
[2025-04-19 02:41:10] 2025-04-19 06:40:56,270 | INFO     | sum of deviations: -8936418094.631578
[2025-04-19 02:41:10] 2025-04-19 06:40:56,270 | INFO     | mean x: 1745039045.5263157
[2025-04-19 02:41:10] 2025-04-19 06:40:56,270 | INFO     | mean y: 2478007.1263157893
[2025-04-19 02:41:10] 2025-04-19 06:40:56,271 | INFO     | -- intersect: 7334879739.028143
[2025-04-19 02:41:10] 2025-04-19 06:40:56,271 | INFO     | intersect: 7334879739.028143
[2025-04-19 02:41:10] 2025-04-19 06:40:56,271 | INFO     | chi2: 0.7964284930631585
[2025-04-19 02:41:10] 2025-04-19 06:40:56,271 | INFO     | current chi2=0.7964284930631585 (change=3.0808782571488416 %)
[2025-04-19 02:41:10] 2025-04-19 06:40:56,271 | INFO     | left removable region: 40
[2025-04-19 02:41:10] 2025-04-19 06:40:56,271 | INFO     | sum of square deviations: 1367702474.9451203
[2025-04-19 02:41:10] 2025-04-19 06:40:56,272 | INFO     | sum of deviations: 707742958.4207318
[2025-04-19 02:41:10] 2025-04-19 06:40:56,272 | INFO     | mean x: 1745039472.5182927
[2025-04-19 02:41:10] 2025-04-19 06:40:56,272 | INFO     | mean y: 2492480.3597560977
[2025-04-19 02:41:10] 2025-04-19 06:40:56,272 | INFO     | -- intersect: -900510491.0215789
[2025-04-19 02:41:10] 2025-04-19 06:40:56,272 | INFO     | intersect: -900510491.0215789
[2025-04-19 02:41:10] 2025-04-19 06:40:56,272 | INFO     | chi2: 0.000230320966915588
[2025-04-19 02:41:10] 2025-04-19 06:40:56,273 | INFO     | -- intersect: -900510491.0215789
[2025-04-19 02:41:10] 2025-04-19 06:40:56,273 | INFO     | current memory leak: 0.52 B/s (using 164 data points, chi2=0.00)
[2025-04-19 02:41:10] 2025-04-19 06:40:56,273 | INFO     | ..............................
[2025-04-19 02:41:10] 2025-04-19 06:40:56,273 | INFO     | . Timing measurements:
[2025-04-19 02:41:10] 2025-04-19 06:40:56,273 | INFO     | . get job = 0 s
[2025-04-19 02:41:10] 2025-04-19 06:40:56,274 | INFO     | . initial setup = 2 s
[2025-04-19 02:41:10] 2025-04-19 06:40:56,274 | INFO     | . payload setup = 7 s
[2025-04-19 02:41:10] 2025-04-19 06:40:56,274 | INFO     | . stage-in = 0 s
[2025-04-19 02:41:10] 2025-04-19 06:40:56,274 | INFO     | . payload execution = 12766 s
[2025-04-19 02:41:10] 2025-04-19 06:40:56,274 | INFO     | . stage-out = 2 s
[2025-04-19 02:41:10] 2025-04-19 06:40:56,274 | INFO     | . log creation = 0 s
[2025-04-19 02:41:10] 2025-04-19 06:40:56,274 | INFO     | ..............................
[2025-04-19 02:41:10] 2025-04-19 06:40:56,372 | INFO     | 
[2025-04-19 02:41:10] 2025-04-19 06:40:56,372 | INFO     | job summary report
[2025-04-19 02:41:10] 2025-04-19 06:40:56,372 | INFO     | --------------------------------------------------
[2025-04-19 02:41:10] 2025-04-19 06:40:56,372 | INFO     | PanDA job id: 6606058818
[2025-04-19 02:41:10] 2025-04-19 06:40:56,372 | INFO     | task id: 44075483
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | errors: (none)
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | pilot state: finished 
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | transexitcode: 0
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | exeerrorcode: 0
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | exeerrordiag: 
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | exitcode: 0
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | exitmsg: OK
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | cpuconsumptiontime: 34683 s
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | nevents: 400
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | neventsw: 0
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | pid: 10221
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | pgrp: 10221
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | corecount: 8
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | event service: False
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | sizes: {0: 2426602, 1: 2426801, 6: 2427007, 11: 2427035, 12777: 2456917, 12780: 2465858, 12783: 2466042, 12810: 2466212}
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | --------------------------------------------------
[2025-04-19 02:41:10] 2025-04-19 06:40:56,373 | INFO     | 
[2025-04-19 02:41:10] 2025-04-19 06:40:56,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 02:41:10] 2025-04-19 06:40:56,440 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,440 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,440 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,440 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,441 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 02:41:10] 2025-04-19 06:40:56,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,442 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 02:41:10] 2025-04-19 06:40:56,442 | INFO     | job 6606058818 has completed (purged errors)
[2025-04-19 02:41:10] 2025-04-19 06:40:56,442 | INFO     | overall cleanup function is called
[2025-04-19 02:41:10] 2025-04-19 06:40:57,162 | INFO     | PID=1079 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-19 02:41:10] 2025-04-19 06:40:57,162 | INFO     | .. there are 27 such processes running
[2025-04-19 02:41:10] 2025-04-19 06:40:57,449 | INFO     | --- collectZombieJob: --- 10, [10221]
[2025-04-19 02:41:10] 2025-04-19 06:40:57,450 | INFO     | zombie collector waiting for pid 10221
[2025-04-19 02:41:10] 2025-04-19 06:40:57,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 02:41:10] 2025-04-19 06:40:57,450 | INFO     | collected zombie processes
[2025-04-19 02:41:10] 2025-04-19 06:40:57,450 | INFO     | will attempt to kill all subprocesses of pid=10221
[2025-04-19 02:41:10] 2025-04-19 06:40:57,956 | INFO     | process IDs to be killed: [10221] (in reverse order)
[2025-04-19 02:41:10] 2025-04-19 06:40:58,164 | INFO     | 12831s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 02:41:10] 2025-04-19 06:40:58,269 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 02:41:10] 2025-04-19 06:40:58,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 02:41:10] 2025-04-19 06:40:58,282 | INFO     | did not find any defunct processes belonging to 10221
[2025-04-19 02:41:10] 2025-04-19 06:40:58,293 | INFO     | did not find any defunct processes belonging to 10221
[2025-04-19 02:41:10] 2025-04-19 06:40:58,293 | INFO     | ready for new job
[2025-04-19 02:41:10] 2025-04-19 06:40:58,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 02:41:10] 2025-04-19 06:40:58,295 | INFO     | **************************************
[2025-04-19 02:41:10] 2025-04-19 06:40:58,295 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 02:41:10] 2025-04-19 06:40:58,295 | INFO     | **************************************
[2025-04-19 02:41:10] 2025-04-19 06:40:58,295 | INFO     | 
[2025-04-19 02:41:10] 2025-04-19 06:40:58,300 | INFO     | architecture information:
[2025-04-19 02:41:10] 2025-04-19 06:40:58,307 | INFO     | executing command: cat /etc/os-release
[2025-04-19 02:41:10] 2025-04-19 06:40:58,379 | INFO     | cat /etc/os-release:
[2025-04-19 02:41:10] NAME="CentOS Linux"
[2025-04-19 02:41:10] VERSION="7 (Core)"
[2025-04-19 02:41:10] ID="centos"
[2025-04-19 02:41:10] ID_LIKE="rhel fedora"
[2025-04-19 02:41:10] VERSION_ID="7"
[2025-04-19 02:41:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 02:41:10] ANSI_COLOR="0;31"
[2025-04-19 02:41:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 02:41:10] HOME_URL="https://www.centos.org/"
[2025-04-19 02:41:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 02:41:10] 
[2025-04-19 02:41:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 02:41:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 02:41:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 02:41:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 02:41:10] 
[2025-04-19 02:41:10] 2025-04-19 06:40:58,380 | INFO     | **************************************
[2025-04-19 02:41:10] 2025-04-19 06:40:58,883 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 02:41:10] 2025-04-19 06:40:58,998 | INFO     | sufficient remaining disk space (102982746112 B)
[2025-04-19 02:41:10] 2025-04-19 06:40:58,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 02:41:10] 2025-04-19 06:40:58,999 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 02:41:10] 2025-04-19 06:40:58,999 | INFO     | update_server=False
[2025-04-19 02:41:10] 2025-04-19 06:40:58,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 02:41:10] 2025-04-19 06:40:58,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 02:41:10] 2025-04-19 06:40:59,165 | INFO     | all data control threads have been joined
[2025-04-19 02:41:10] 2025-04-19 06:40:59,171 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 02:41:10] 2025-04-19 06:40:59,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 02:41:10] 2025-04-19 06:40:59,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 02:41:10] 2025-04-19 06:40:59,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:41:10] 2025-04-19 06:40:59,214 | INFO     | aborting loop
[2025-04-19 02:41:10] 2025-04-19 06:40:59,344 | INFO     | all payload control threads have been joined
[2025-04-19 02:41:10] 2025-04-19 06:41:00,005 | INFO     | [job] retrieve thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,054 | INFO     | [data] copytool_in thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 02:41:10] 2025-04-19 06:41:00,147 | INFO     | all job control threads have been joined
[2025-04-19 02:41:10] 2025-04-19 06:41:00,171 | INFO     | [data] control thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,174 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,219 | INFO     | [job] job monitor thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,350 | INFO     | [payload] control thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,412 | INFO     | [payload] validate_post thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,584 | INFO     | [job] validate thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,647 | INFO     | [payload] failed_post thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:00,675 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:01,027 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:01,155 | INFO     | [job] control thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:01,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:41:10] 2025-04-19 06:41:02,134 | INFO     | [data] copytool_out thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:02,391 | INFO     | [job] queue monitor thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:03,008 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 02:41:10] 2025-04-19 06:41:04,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708666033984)>', '<ExcThread(monitor, started 139708063524608)>']
[2025-04-19 02:41:10] 2025-04-19 06:41:05,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 02:41:10] 2025-04-19 06:41:05,205 | INFO     | [monitor] control thread has ended
[2025-04-19 02:41:10] 2025-04-19 06:41:09,364 | INFO     | all workflow threads have been joined
[2025-04-19 02:41:10] 2025-04-19 06:41:09,365 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 02:41:10] 2025-04-19 06:41:09,365 | INFO     | traces error code: 0
[2025-04-19 02:41:10] 2025-04-19 06:41:09,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 02:41:10] 2025-04-19 06:41:09,539 [wrapper] ==== pilot stdout END ====
[2025-04-19 02:41:10] 2025-04-19 06:41:09,555 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 02:41:10] 2025-04-19 06:41:09,561 [wrapper] pilotpid: 1079
[2025-04-19 02:41:10] 2025-04-19 06:41:09,564 [wrapper] Pilot exit status: 0
[2025-04-19 02:41:10] 2025-04-19 06:41:09,580 [wrapper] pandaids: 6606058818
[2025-04-19 02:41:10] 2025-04-19 06:41:09,695 [wrapper] cleanup supervisor_pilot 86601 1080
[2025-04-19 02:41:10] 2025-04-19 06:41:09,733 [wrapper] Test setup, not cleaning
[2025-04-19 02:41:10] 2025-04-19 06:41:09,763 [wrapper] apfmon messages muted
[2025-04-19 02:41:10] 2025-04-19 06:41:09,789 [wrapper] ==== wrapper stdout END ====
[2025-04-19 02:41:10] 2025-04-19 06:41:09,841 [wrapper] ==== wrapper stderr END ====
[2025-04-19 02:41:10]  *** Error codes and diagnostics ***
[2025-04-19 02:41:10]     "exeErrorCode": 0,
[2025-04-19 02:41:10]     "exeErrorDiag": "",
[2025-04-19 02:41:10]     "pilotErrorCode": 0,
[2025-04-19 02:41:10]     "pilotErrorDiag": "",
[2025-04-19 02:41:10]  *** Listing of results directory ***
[2025-04-19 02:41:10] total 410188
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 23:29 pilot3.tar.gz
[2025-04-19 02:41:10] -rwx------ 1 boincer umatlas     37140 Apr 17 23:41 runpilot2-wrapper.sh
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 23:41 queuedata.json
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas       100 Apr 18 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 02:41:10] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 23:06 run_atlas
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas       105 Apr 18 23:06 job.xml
[2025-04-19 02:41:10] -rw-r--r-- 2 boincer umatlas 221133986 Apr 18 23:06 EVNT.44075481._002483.pool.root.1
[2025-04-19 02:41:10] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 23:06 start_atlas.sh
[2025-04-19 02:41:10] drwxrwx--x 2 boincer umatlas      4096 Apr 18 23:06 shared
[2025-04-19 02:41:10] -rw-r--r-- 2 boincer umatlas    508889 Apr 18 23:06 input.tar.gz
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas         0 Apr 18 23:06 boinc_lockfile
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 23:06 pandaJob.out
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas       467 Apr 18 23:06 setup.sh.local
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas    991292 Apr 18 23:07 agis_schedconf.cvmfs.json
[2025-04-19 02:41:10] drwx------ 4 boincer umatlas      4096 Apr 18 23:07 pilot3
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas      6387 Apr 19 02:36 init_data.xml
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas 192004739 Apr 19 02:39 HITS.44075483._063868.pool.root.1
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas       531 Apr 19 02:39 boinc_task_state.xml
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas        95 Apr 19 02:40 pilot_heartbeat.json
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas      1073 Apr 19 02:40 memory_monitor_summary.json
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas   1618536 Apr 19 02:40 agis_ddmendpoints.agis.ALL.json
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas    387917 Apr 19 02:40 log.44075483._063868.job.log.tgz.1
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas      7742 Apr 19 02:40 heartbeat.json
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas        28 Apr 19 02:41 wrapper_checkpoint.txt
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 02:41 boinc_mmap_file
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas      4354 Apr 19 02:41 pilotlog.txt
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas   1126370 Apr 19 02:41 log.44075483._063868.job.log.1
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas       357 Apr 19 02:41 output.list
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas       620 Apr 19 02:41 runtime_log
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas   1536000 Apr 19 02:41 result.tar.gz
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas     11414 Apr 19 02:41 runtime_log.err
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas       661 Apr 19 02:41 rJvLDmkmrP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmKLeLDmGw0nrm.diag
[2025-04-19 02:41:10] -rw-r--r-- 1 boincer umatlas     20945 Apr 19 02:41 stderr.txt
[2025-04-19 02:41:10] HITS file was successfully produced:
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas 192004739 Apr 19 02:39 shared/HITS.pool.root.1
[2025-04-19 02:41:10]  *** Contents of shared directory: ***
[2025-04-19 02:41:10] total 405484
[2025-04-19 02:41:10] -rw-r--r-- 2 boincer umatlas 221133986 Apr 18 23:06 ATLAS.root_0
[2025-04-19 02:41:10] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 23:06 start_atlas.sh
[2025-04-19 02:41:10] -rw-r--r-- 2 boincer umatlas    508889 Apr 18 23:06 input.tar.gz
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas 192004739 Apr 19 02:39 HITS.pool.root.1
[2025-04-19 02:41:10] -rw------- 1 boincer umatlas   1536000 Apr 19 02:41 result.tar.gz
02:41:12 (92962): run_atlas exited; CPU time 34231.843776
02:41:12 (92962): called boinc_finish(0)

</stderr_txt>
]]>

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