Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:58:37 (48503): wrapper (7.7.26015): starting
22:58:37 (48503): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 22:58:37] Arguments: --nthreads 8
[2025-04-18 22:58:37] Threads: 8
[2025-04-18 22:58:37] Checking for CVMFS
[2025-04-18 22:58:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 22:58:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 22:58:37] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 22:58:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 22:58:38] 2.11.2.0 70417 23495 188264 145023 0 559 13956701 18432000 20757 130560 0 147446097 98.933 326187823 55252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 22:58:38] CVMFS is ok
[2025-04-18 22:58:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 22:58:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 22:58:38] Further information can be found at the LHC@home message board.
[2025-04-18 22:58:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 22:58:38] Checking for apptainer binary...
[2025-04-18 22:58:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 22:58:38] Running /usr/bin/apptainer --version
[2025-04-18 22:58:38] apptainer version 1.3.2-1.el7
[2025-04-18 22:58:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 22:58:39] c-212-13.aglt2.org
[2025-04-18 22:58:39] apptainer works
[2025-04-18 22:58:39] Set ATHENA_PROC_NUMBER=8
[2025-04-18 22:58:39] Set ATHENA_CORE_NUMBER=8
[2025-04-18 22:58:39] Starting ATLAS job with PandaID=6607057035
[2025-04-18 22:58:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 03:12:21]  *** The last 200 lines of the pilot log: ***
[2025-04-19 03:12:21] 2025-04-19 07:12:04,346 | INFO     | mean x: 1745039112.5887096
[2025-04-19 03:12:21] 2025-04-19 07:12:04,346 | INFO     | mean y: 2394932.044354839
[2025-04-19 03:12:21] 2025-04-19 07:12:04,346 | INFO     | -- intersect: -51470159426.4654
[2025-04-19 03:12:21] 2025-04-19 07:12:04,346 | INFO     | intersect: -51470159426.4654
[2025-04-19 03:12:21] 2025-04-19 07:12:04,346 | INFO     | chi2: 6.454813118453605
[2025-04-19 03:12:21] 2025-04-19 07:12:04,347 | INFO     | sum of square deviations: 4449371880.008197
[2025-04-19 03:12:21] 2025-04-19 07:12:04,348 | INFO     | sum of deviations: 153380593214.7737
[2025-04-19 03:12:21] 2025-04-19 07:12:04,348 | INFO     | mean x: 1745038960.090535
[2025-04-19 03:12:21] 2025-04-19 07:12:04,356 | INFO     | mean y: 2402327.5102880658
[2025-04-19 03:12:21] 2025-04-19 07:12:04,356 | INFO     | -- intersect: -60153304612.65336
[2025-04-19 03:12:21] 2025-04-19 07:12:04,356 | INFO     | intersect: -60153304612.65336
[2025-04-19 03:12:21] 2025-04-19 07:12:04,357 | INFO     | chi2: 5.650363803351692
[2025-04-19 03:12:21] 2025-04-19 07:12:04,357 | INFO     | current chi2=5.650363803351692 (change=12.462782428232972 %)
[2025-04-19 03:12:21] 2025-04-19 07:12:04,357 | INFO     | right removable region: 242
[2025-04-19 03:12:21] 2025-04-19 07:12:04,357 | INFO     | sum of square deviations: 4449358460.008197
[2025-04-19 03:12:21] 2025-04-19 07:12:04,359 | INFO     | sum of deviations: 73677768379.01648
[2025-04-19 03:12:21] 2025-04-19 07:12:04,359 | INFO     | mean x: 1745039265.090535
[2025-04-19 03:12:21] 2025-04-19 07:12:04,359 | INFO     | mean y: 2430678.181069959
[2025-04-19 03:12:21] 2025-04-19 07:12:04,359 | INFO     | -- intersect: -28894004603.72533
[2025-04-19 03:12:21] 2025-04-19 07:12:04,359 | INFO     | intersect: -28894004603.72533
[2025-04-19 03:12:21] 2025-04-19 07:12:04,359 | INFO     | chi2: 3.5154099849525915
[2025-04-19 03:12:21] 2025-04-19 07:12:04,359 | INFO     | current chi2=3.5154099849525915 (change=45.53816012267778 %)
[2025-04-19 03:12:21] 2025-04-19 07:12:04,359 | INFO     | sum of square deviations: 4180314147.466403
[2025-04-19 03:12:21] 2025-04-19 07:12:04,375 | INFO     | sum of deviations: 21350269757.537785
[2025-04-19 03:12:21] 2025-04-19 07:12:04,375 | INFO     | mean x: 1745039417.592437
[2025-04-19 03:12:21] 2025-04-19 07:12:04,375 | INFO     | mean y: 2460341.5210084035
[2025-04-19 03:12:21] 2025-04-19 07:12:04,375 | INFO     | -- intersect: -8910042640.035019
[2025-04-19 03:12:21] 2025-04-19 07:12:04,375 | INFO     | intersect: -8910042640.035019
[2025-04-19 03:12:21] 2025-04-19 07:12:04,376 | INFO     | chi2: 1.785996547372041
[2025-04-19 03:12:21] 2025-04-19 07:12:04,376 | INFO     | current chi2=1.785996547372041 (change=49.19521321789365 %)
[2025-04-19 03:12:21] 2025-04-19 07:12:04,376 | INFO     | sum of square deviations: 3922339809.9227467
[2025-04-19 03:12:21] 2025-04-19 07:12:04,377 | INFO     | sum of deviations: -12667323479.180262
[2025-04-19 03:12:21] 2025-04-19 07:12:04,377 | INFO     | mean x: 1745039570.0944207
[2025-04-19 03:12:21] 2025-04-19 07:12:04,377 | INFO     | mean y: 2480357.5536480686
[2025-04-19 03:12:21] 2025-04-19 07:12:04,377 | INFO     | -- intersect: 5638142179.212862
[2025-04-19 03:12:21] 2025-04-19 07:12:04,377 | INFO     | intersect: 5638142179.212862
[2025-04-19 03:12:21] 2025-04-19 07:12:04,378 | INFO     | chi2: 0.9254117442330458
[2025-04-19 03:12:21] 2025-04-19 07:12:04,378 | INFO     | current chi2=0.9254117442330458 (change=48.185132519168675 %)
[2025-04-19 03:12:21] 2025-04-19 07:12:04,378 | INFO     | sum of square deviations: 3675202884.8771873
[2025-04-19 03:12:21] 2025-04-19 07:12:04,383 | INFO     | sum of deviations: -21412561162.491222
[2025-04-19 03:12:21] 2025-04-19 07:12:04,383 | INFO     | mean x: 1745039722.5964913
[2025-04-19 03:12:21] 2025-04-19 07:12:04,383 | INFO     | mean y: 2485719.1359649124
[2025-04-19 03:12:21] 2025-04-19 07:12:04,384 | INFO     | -- intersect: 10169480837.916388
[2025-04-19 03:12:21] 2025-04-19 07:12:04,384 | INFO     | intersect: 10169480837.916388
[2025-04-19 03:12:21] 2025-04-19 07:12:04,384 | INFO     | chi2: 0.8559690115290233
[2025-04-19 03:12:21] 2025-04-19 07:12:04,384 | INFO     | current chi2=0.8559690115290233 (change=7.503982215135456 %)
[2025-04-19 03:12:21] 2025-04-19 07:12:04,384 | INFO     | left removable region: 40
[2025-04-19 03:12:21] 2025-04-19 07:12:04,390 | INFO     | sum of square deviations: 2555808690.1039605
[2025-04-19 03:12:21] 2025-04-19 07:12:04,391 | INFO     | sum of deviations: -6458832784.524753
[2025-04-19 03:12:21] 2025-04-19 07:12:04,392 | INFO     | mean x: 1745040149.6089108
[2025-04-19 03:12:21] 2025-04-19 07:12:04,392 | INFO     | mean y: 2496456.0693069305
[2025-04-19 03:12:21] 2025-04-19 07:12:04,392 | INFO     | -- intersect: 4412420630.850775
[2025-04-19 03:12:21] 2025-04-19 07:12:04,392 | INFO     | intersect: 4412420630.850775
[2025-04-19 03:12:21] 2025-04-19 07:12:04,392 | INFO     | chi2: 0.005950031733242935
[2025-04-19 03:12:21] 2025-04-19 07:12:04,392 | INFO     | -- intersect: 4412420630.850775
[2025-04-19 03:12:21] 2025-04-19 07:12:04,392 | INFO     | current memory leak: -2.53 B/s (using 202 data points, chi2=0.01)
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | ..............................
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | . Timing measurements:
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | . get job = 0 s
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | . initial setup = 2 s
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | . payload setup = 9 s
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | . stage-in = 0 s
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | . payload execution = 15099 s
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | . stage-out = 3 s
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | . log creation = 0 s
[2025-04-19 03:12:21] 2025-04-19 07:12:04,393 | INFO     | ..............................
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | 
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | job summary report
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | --------------------------------------------------
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | PanDA job id: 6607057035
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | task id: 44075483
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | errors: (none)
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | pilot state: finished 
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | transexitcode: 0
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | exeerrorcode: 0
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | exeerrordiag: 
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | exitcode: 0
[2025-04-19 03:12:21] 2025-04-19 07:12:04,512 | INFO     | exitmsg: OK
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | cpuconsumptiontime: 34366 s
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | nevents: 400
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | neventsw: 0
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | pid: 63838
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | pgrp: 63838
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | corecount: 8
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | event service: False
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | sizes: {0: 2426823, 6: 2427029, 11: 2427057, 15113: 2458042, 15117: 2467039, 15167: 2467153}
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | --------------------------------------------------
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | 
[2025-04-19 03:12:21] 2025-04-19 07:12:04,513 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 03:12:21] 2025-04-19 07:12:04,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,606 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 03:12:21] 2025-04-19 07:12:04,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 03:12:21] 2025-04-19 07:12:04,608 | INFO     | job 6607057035 has completed (purged errors)
[2025-04-19 03:12:21] 2025-04-19 07:12:04,608 | INFO     | overall cleanup function is called
[2025-04-19 03:12:21] 2025-04-19 07:12:05,616 | INFO     | --- collectZombieJob: --- 10, [63838]
[2025-04-19 03:12:21] 2025-04-19 07:12:05,616 | INFO     | zombie collector waiting for pid 63838
[2025-04-19 03:12:21] 2025-04-19 07:12:05,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 03:12:21] 2025-04-19 07:12:05,617 | INFO     | collected zombie processes
[2025-04-19 03:12:21] 2025-04-19 07:12:05,617 | INFO     | will attempt to kill all subprocesses of pid=63838
[2025-04-19 03:12:21] 2025-04-19 07:12:06,117 | INFO     | process IDs to be killed: [63838] (in reverse order)
[2025-04-19 03:12:21] 2025-04-19 07:12:06,265 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 03:12:21] 2025-04-19 07:12:06,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 03:12:21] 2025-04-19 07:12:06,281 | INFO     | did not find any defunct processes belonging to 63838
[2025-04-19 03:12:21] 2025-04-19 07:12:06,315 | INFO     | did not find any defunct processes belonging to 63838
[2025-04-19 03:12:21] 2025-04-19 07:12:06,315 | INFO     | ready for new job
[2025-04-19 03:12:21] 2025-04-19 07:12:06,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 03:12:21] 2025-04-19 07:12:06,317 | INFO     | **************************************
[2025-04-19 03:12:21] 2025-04-19 07:12:06,317 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 03:12:21] 2025-04-19 07:12:06,317 | INFO     | **************************************
[2025-04-19 03:12:21] 2025-04-19 07:12:06,317 | INFO     | 
[2025-04-19 03:12:21] 2025-04-19 07:12:06,332 | INFO     | architecture information:
[2025-04-19 03:12:21] 2025-04-19 07:12:06,332 | INFO     | executing command: cat /etc/os-release
[2025-04-19 03:12:21] 2025-04-19 07:12:06,389 | INFO     | cat /etc/os-release:
[2025-04-19 03:12:21] NAME="CentOS Linux"
[2025-04-19 03:12:21] VERSION="7 (Core)"
[2025-04-19 03:12:21] ID="centos"
[2025-04-19 03:12:21] ID_LIKE="rhel fedora"
[2025-04-19 03:12:21] VERSION_ID="7"
[2025-04-19 03:12:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 03:12:21] ANSI_COLOR="0;31"
[2025-04-19 03:12:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 03:12:21] HOME_URL="https://www.centos.org/"
[2025-04-19 03:12:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 03:12:21] 
[2025-04-19 03:12:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 03:12:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 03:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 03:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 03:12:21] 
[2025-04-19 03:12:21] 2025-04-19 07:12:06,389 | INFO     | **************************************
[2025-04-19 03:12:21] 2025-04-19 07:12:06,892 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 03:12:21] 2025-04-19 07:12:07,006 | INFO     | sufficient remaining disk space (102922977280 B)
[2025-04-19 03:12:21] 2025-04-19 07:12:07,006 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 03:12:21] 2025-04-19 07:12:07,006 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 03:12:21] 2025-04-19 07:12:07,006 | INFO     | update_server=False
[2025-04-19 03:12:21] 2025-04-19 07:12:07,006 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 03:12:21] 2025-04-19 07:12:07,254 | INFO     | all data control threads have been joined
[2025-04-19 03:12:21] 2025-04-19 07:12:07,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 03:12:21] 2025-04-19 07:12:07,668 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 03:12:21] 2025-04-19 07:12:07,668 | INFO     | aborting loop
[2025-04-19 03:12:21] 2025-04-19 07:12:07,974 | INFO     | all job control threads have been joined
[2025-04-19 03:12:21] 2025-04-19 07:12:08,014 | INFO     | [job] retrieve thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:08,259 | INFO     | [data] control thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:08,323 | INFO     | all payload control threads have been joined
[2025-04-19 03:12:21] 2025-04-19 07:12:08,379 | INFO     | PID=53420 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 03:12:21] 2025-04-19 07:12:08,379 | INFO     | .. there are 22 such processes running
[2025-04-19 03:12:21] 2025-04-19 07:12:08,379 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 03:12:21] 2025-04-19 07:12:08,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 03:12:21] 2025-04-19 07:12:08,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 03:12:21] 2025-04-19 07:12:08,383 | INFO     | [payload] failed_post thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:08,616 | INFO     | [job] validate thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:08,618 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:08,621 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:08,674 | INFO     | [job] job monitor thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:08,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:08,980 | INFO     | [job] control thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:09,328 | INFO     | [data] copytool_in thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:09,329 | INFO     | [payload] control thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:09,337 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:09,446 | INFO     | [data] copytool_out thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:09,531 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 03:12:21] 2025-04-19 07:12:09,582 | INFO     | [payload] validate_post thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:10,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 03:12:21] 2025-04-19 07:12:10,535 | INFO     | [job] queue monitor thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:14,253 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 03:12:21] 2025-04-19 07:12:14,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139835338704704)>', '<ExcThread(monitor, started 139835025102592)>']
[2025-04-19 03:12:21] 2025-04-19 07:12:15,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 03:12:21] 2025-04-19 07:12:15,422 | INFO     | [monitor] control thread has ended
[2025-04-19 03:12:21] 2025-04-19 07:12:19,584 | INFO     | all workflow threads have been joined
[2025-04-19 03:12:21] 2025-04-19 07:12:19,584 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 03:12:21] 2025-04-19 07:12:19,585 | INFO     | traces error code: 0
[2025-04-19 03:12:21] 2025-04-19 07:12:19,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 03:12:21] 2025-04-19 07:12:19,838 [wrapper] ==== pilot stdout END ====
[2025-04-19 03:12:21] 2025-04-19 07:12:19,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 03:12:21] 2025-04-19 07:12:19,891 [wrapper] pilotpid: 53420
[2025-04-19 03:12:21] 2025-04-19 07:12:19,903 [wrapper] Pilot exit status: 0
[2025-04-19 03:12:21] 2025-04-19 07:12:20,050 [wrapper] pandaids: 6607057035
[2025-04-19 03:12:21] 2025-04-19 07:12:20,151 [wrapper] cleanup supervisor_pilot 46067 53421
[2025-04-19 03:12:21] 2025-04-19 07:12:20,191 [wrapper] Test setup, not cleaning
[2025-04-19 03:12:21] 2025-04-19 07:12:20,230 [wrapper] apfmon messages muted
[2025-04-19 03:12:21] 2025-04-19 07:12:20,268 [wrapper] ==== wrapper stdout END ====
[2025-04-19 03:12:21] 2025-04-19 07:12:20,310 [wrapper] ==== wrapper stderr END ====
[2025-04-19 03:12:21]  *** Error codes and diagnostics ***
[2025-04-19 03:12:21]     "exeErrorCode": 0,
[2025-04-19 03:12:21]     "exeErrorDiag": "",
[2025-04-19 03:12:21]     "pilotErrorCode": 0,
[2025-04-19 03:12:21]     "pilotErrorDiag": "",
[2025-04-19 03:12:21]  *** Listing of results directory ***
[2025-04-19 03:12:21] total 414884
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 20:12 pilot3.tar.gz
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 20:18 queuedata.json
[2025-04-19 03:12:21] -rwx------ 1 boincer umatlas     37140 Apr 18 20:18 runpilot2-wrapper.sh
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas       100 Apr 18 22:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 03:12:21] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 22:58 run_atlas
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas       105 Apr 18 22:58 job.xml
[2025-04-19 03:12:21] -rw-r--r-- 2 boincer umatlas 224958066 Apr 18 22:58 EVNT.44075481._002923.pool.root.1
[2025-04-19 03:12:21] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 22:58 start_atlas.sh
[2025-04-19 03:12:21] drwxrwx--x 2 boincer umatlas      4096 Apr 18 22:58 shared
[2025-04-19 03:12:21] -rw-r--r-- 2 boincer umatlas    508887 Apr 18 22:58 input.tar.gz
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas         0 Apr 18 22:58 boinc_lockfile
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 22:58 pandaJob.out
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas       467 Apr 18 22:58 setup.sh.local
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas    991292 Apr 18 22:58 agis_schedconf.cvmfs.json
[2025-04-19 03:12:21] drwx------ 4 boincer umatlas      4096 Apr 18 22:58 pilot3
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas 192634914 Apr 19 03:10 HITS.44075483._075301.pool.root.1
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas       530 Apr 19 03:10 boinc_task_state.xml
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas      1082 Apr 19 03:11 memory_monitor_summary.json
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas   1618536 Apr 19 03:11 agis_ddmendpoints.agis.ALL.json
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas    401512 Apr 19 03:11 log.44075483._075301.job.log.tgz.1
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas      6389 Apr 19 03:11 init_data.xml
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas        95 Apr 19 03:11 pilot_heartbeat.json
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas      7755 Apr 19 03:12 heartbeat.json
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas      4747 Apr 19 03:12 pilotlog.txt
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas   1285556 Apr 19 03:12 log.44075483._075301.job.log.1
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas        28 Apr 19 03:12 wrapper_checkpoint.txt
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 03:12 boinc_mmap_file
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas       357 Apr 19 03:12 output.list
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas       620 Apr 19 03:12 runtime_log
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas   1710080 Apr 19 03:12 result.tar.gz
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas     11419 Apr 19 03:12 runtime_log.err
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas       663 Apr 19 03:12 fAPNDmA6AQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmfVgLDmPgSbam.diag
[2025-04-19 03:12:21] -rw-r--r-- 1 boincer umatlas     20869 Apr 19 03:12 stderr.txt
[2025-04-19 03:12:21] HITS file was successfully produced:
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas 192634914 Apr 19 03:10 shared/HITS.pool.root.1
[2025-04-19 03:12:21]  *** Contents of shared directory: ***
[2025-04-19 03:12:21] total 410008
[2025-04-19 03:12:21] -rw-r--r-- 2 boincer umatlas 224958066 Apr 18 22:58 ATLAS.root_0
[2025-04-19 03:12:21] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 22:58 start_atlas.sh
[2025-04-19 03:12:21] -rw-r--r-- 2 boincer umatlas    508887 Apr 18 22:58 input.tar.gz
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas 192634914 Apr 19 03:10 HITS.pool.root.1
[2025-04-19 03:12:21] -rw------- 1 boincer umatlas   1710080 Apr 19 03:12 result.tar.gz
03:12:23 (48503): run_atlas exited; CPU time 33981.138469
03:12:23 (48503): called boinc_finish(0)

</stderr_txt>
]]>

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