Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:05:28 (16378): wrapper (7.7.26015): starting
23:05:28 (16378): wrapper: running run_atlas (--nthreads 10)
[2025-04-18 23:05:28] Arguments: --nthreads 10
[2025-04-18 23:05:28] Threads: 10
[2025-04-18 23:05:28] Checking for CVMFS
[2025-04-18 23:05:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 23:05:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 23:05:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 23:05:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 23:05:33] 2.11.2.0 5745 24168 280472 145023 3 291 16233316 18432000 13107 130560 0 93575141 98.799 254277400 35865 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 23:05:33] CVMFS is ok
[2025-04-18 23:05:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 23:05:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 23:05:33] Further information can be found at the LHC@home message board.
[2025-04-18 23:05:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 23:05:33] Checking for apptainer binary...
[2025-04-18 23:05:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 23:05:33] Running /usr/bin/apptainer --version
[2025-04-18 23:05:34] apptainer version 1.3.2-1.el7
[2025-04-18 23:05:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 23:06:27] c-210-20.aglt2.org
[2025-04-18 23:06:27] apptainer works
[2025-04-18 23:06:27] Set ATHENA_PROC_NUMBER=10
[2025-04-18 23:06:27] Set ATHENA_CORE_NUMBER=10
[2025-04-18 23:06:27] Starting ATLAS job with PandaID=6606393748
[2025-04-18 23:06:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 23:38:43]  *** The last 200 lines of the pilot log: ***
[2025-04-19 23:38:43] 2025-04-20 03:38:05,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:38:43] 2025-04-20 03:38:06,222 | INFO     | PID=38050 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 23:38:43] 2025-04-20 03:38:06,222 | INFO     | .. there are 41 such processes running
[2025-04-19 23:38:43] 2025-04-20 03:38:08,274 | INFO     | monitor loop #3751: job 0:6606393748 is in state 'finished'
[2025-04-19 23:38:43] 2025-04-20 03:38:08,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:38:43] 2025-04-20 03:38:09,239 | INFO     | 88049s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 23:38:43] 2025-04-20 03:38:10,780 | INFO     | monitor loop #3752: job 0:6606393748 is in state 'finished'
[2025-04-19 23:38:43] 2025-04-20 03:38:10,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:38:43] 2025-04-20 03:38:13,291 | INFO     | monitor loop #3753: job 0:6606393748 is in state 'finished'
[2025-04-19 23:38:43] 2025-04-20 03:38:13,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:38:43] 2025-04-20 03:38:15,796 | INFO     | monitor loop #3754: job 0:6606393748 is in state 'finished'
[2025-04-19 23:38:43] 2025-04-20 03:38:15,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:38:43] 2025-04-20 03:38:18,328 | INFO     | monitor loop #3755: job 0:6606393748 is in state 'finished'
[2025-04-19 23:38:43] 2025-04-20 03:38:18,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:38:43] 2025-04-20 03:38:19,111 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 23:38:43] 2025-04-20 03:38:19,111 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6606393748/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 23:38:43] 2025-04-20 03:38:19,117 | INFO     | extracted standard info from prmon json
[2025-04-19 23:38:43] 2025-04-20 03:38:19,118 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 23:38:43] 2025-04-20 03:38:19,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 23:38:43] 2025-04-20 03:38:19,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 23:38:43] 2025-04-20 03:38:19,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 23:38:43] 2025-04-20 03:38:19,169 | INFO     | fitting pss+swap vs Time
[2025-04-19 23:38:43] 2025-04-20 03:38:19,176 | INFO     | sum of square deviations: 910560068894.9994
[2025-04-19 23:38:43] 2025-04-20 03:38:19,315 | INFO     | sum of deviations: 2850913079615.9604
[2025-04-19 23:38:43] 2025-04-20 03:38:19,315 | INFO     | mean x: 1745076492.9993017
[2025-04-19 23:38:43] 2025-04-20 03:38:19,316 | INFO     | mean y: 2517659.959497207
[2025-04-19 23:38:43] 2025-04-20 03:38:19,316 | INFO     | -- intersect: -5461220064.5153885
[2025-04-19 23:38:43] 2025-04-20 03:38:19,316 | INFO     | intersect: -5461220064.5153885
[2025-04-19 23:38:43] 2025-04-20 03:38:19,322 | INFO     | chi2: 21.688882293443356
[2025-04-19 23:38:43] 2025-04-20 03:38:19,330 | INFO     | sum of square deviations: 901055850364.7355
[2025-04-19 23:38:43] 2025-04-20 03:38:19,485 | INFO     | sum of deviations: 3238020153612.7534
[2025-04-19 23:38:43] 2025-04-20 03:38:19,489 | INFO     | mean x: 1745076340.5031536
[2025-04-19 23:38:43] 2025-04-20 03:38:19,489 | INFO     | mean y: 2523866.7203924316
[2025-04-19 23:38:43] 2025-04-20 03:38:19,489 | INFO     | -- intersect: -6268555065.683984
[2025-04-19 23:38:43] 2025-04-20 03:38:19,490 | INFO     | intersect: -6268555065.683984
[2025-04-19 23:38:43] 2025-04-20 03:38:19,491 | INFO     | chi2: 18.605362527234984
[2025-04-19 23:38:43] 2025-04-20 03:38:19,492 | INFO     | current chi2=18.605362527234984 (change=14.217052425705376 %)
[2025-04-19 23:38:43] 2025-04-20 03:38:19,492 | INFO     | right removable region: 1426
[2025-04-19 23:38:43] 2025-04-20 03:38:19,498 | INFO     | sum of square deviations: 901054802018.7291
[2025-04-19 23:38:43] 2025-04-20 03:38:19,603 | INFO     | sum of deviations: 2313618661186.3794
[2025-04-19 23:38:43] 2025-04-20 03:38:19,603 | INFO     | mean x: 1745076645.5038543
[2025-04-19 23:38:43] 2025-04-20 03:38:19,604 | INFO     | mean y: 2526280.0217238963
[2025-04-19 23:38:43] 2025-04-20 03:38:19,604 | INFO     | -- intersect: -4478268765.066248
[2025-04-19 23:38:43] 2025-04-20 03:38:19,604 | INFO     | intersect: -4478268765.066248
[2025-04-19 23:38:43] 2025-04-20 03:38:19,606 | INFO     | chi2: 16.5820150361244
[2025-04-19 23:38:43] 2025-04-20 03:38:19,606 | INFO     | current chi2=16.5820150361244 (change=23.546013981839835 %)
[2025-04-19 23:38:43] 2025-04-20 03:38:19,606 | INFO     | left removable region: 10
[2025-04-19 23:38:43] 2025-04-20 03:38:19,612 | INFO     | sum of square deviations: 880377555503.7723
[2025-04-19 23:38:43] 2025-04-20 03:38:19,714 | INFO     | sum of deviations: 2231740888546.65
[2025-04-19 23:38:43] 2025-04-20 03:38:19,714 | INFO     | mean x: 1745076615.0127118
[2025-04-19 23:38:43] 2025-04-20 03:38:19,714 | INFO     | mean y: 2540121.90819209
[2025-04-19 23:38:43] 2025-04-20 03:38:19,715 | INFO     | -- intersect: -4421196956.602281
[2025-04-19 23:38:43] 2025-04-20 03:38:19,715 | INFO     | intersect: -4421196956.602281
[2025-04-19 23:38:43] 2025-04-20 03:38:19,721 | INFO     | chi2: 9.652747991033454
[2025-04-19 23:38:43] 2025-04-20 03:38:19,722 | INFO     | -- intersect: -4421196956.602281
[2025-04-19 23:38:43] 2025-04-20 03:38:19,722 | INFO     | current memory leak: 2.53 B/s (using 1416 data points, chi2=9.65)
[2025-04-19 23:38:43] 2025-04-20 03:38:19,728 | INFO     | ..............................
[2025-04-19 23:38:43] 2025-04-20 03:38:19,728 | INFO     | . Timing measurements:
[2025-04-19 23:38:43] 2025-04-20 03:38:19,728 | INFO     | . get job = 2 s
[2025-04-19 23:38:43] 2025-04-20 03:38:19,728 | INFO     | . initial setup = 21 s
[2025-04-19 23:38:43] 2025-04-20 03:38:19,728 | INFO     | . payload setup = 187 s
[2025-04-19 23:38:43] 2025-04-20 03:38:19,729 | INFO     | . stage-in = 2 s
[2025-04-19 23:38:43] 2025-04-20 03:38:19,729 | INFO     | . payload execution = 87510 s
[2025-04-19 23:38:43] 2025-04-20 03:38:19,729 | INFO     | . stage-out = 15 s
[2025-04-19 23:38:43] 2025-04-20 03:38:19,729 | INFO     | . log creation = 5 s
[2025-04-19 23:38:43] 2025-04-20 03:38:19,729 | INFO     | ..............................
[2025-04-19 23:38:43] 2025-04-20 03:38:20,025 | INFO     | 
[2025-04-19 23:38:43] 2025-04-20 03:38:20,026 | INFO     | job summary report
[2025-04-19 23:38:43] 2025-04-20 03:38:20,026 | INFO     | --------------------------------------------------
[2025-04-19 23:38:43] 2025-04-20 03:38:20,026 | INFO     | PanDA job id: 6606393748
[2025-04-19 23:38:43] 2025-04-20 03:38:20,026 | INFO     | task id: 44075483
[2025-04-19 23:38:43] 2025-04-20 03:38:20,026 | INFO     | errors: (none)
[2025-04-19 23:38:43] 2025-04-20 03:38:20,026 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 23:38:43] 2025-04-20 03:38:20,026 | INFO     | pilot state: finished 
[2025-04-19 23:38:43] 2025-04-20 03:38:20,026 | INFO     | transexitcode: 0
[2025-04-19 23:38:43] 2025-04-20 03:38:20,027 | INFO     | exeerrorcode: 0
[2025-04-19 23:38:43] 2025-04-20 03:38:20,027 | INFO     | exeerrordiag: 
[2025-04-19 23:38:43] 2025-04-20 03:38:20,027 | INFO     | exitcode: 0
[2025-04-19 23:38:43] 2025-04-20 03:38:20,027 | INFO     | exitmsg: OK
[2025-04-19 23:38:43] 2025-04-20 03:38:20,027 | INFO     | cpuconsumptiontime: 57899 s
[2025-04-19 23:38:43] 2025-04-20 03:38:20,027 | INFO     | nevents: 400
[2025-04-19 23:38:43] 2025-04-20 03:38:20,027 | INFO     | neventsw: 0
[2025-04-19 23:38:43] 2025-04-20 03:38:20,027 | INFO     | pid: 3053
[2025-04-19 23:38:43] 2025-04-20 03:38:20,027 | INFO     | pgrp: 3053
[2025-04-19 23:38:43] 2025-04-20 03:38:20,028 | INFO     | corecount: 10
[2025-04-19 23:38:43] 2025-04-20 03:38:20,028 | INFO     | event service: False
[2025-04-19 23:38:43] 2025-04-20 03:38:20,028 | INFO     | sizes: {0: 2425996, 1: 2426681, 3: 2426709, 5: 2426880, 6: 2426936, 18: 2426964, 30: 2427120, 41: 2427148, 53: 2427176, 65: 2427204, 79: 2427232, 90: 2427568, 104:
[2025-04-19 23:38:43] 2025-04-20 03:38:20,028 | INFO     | --------------------------------------------------
[2025-04-19 23:38:43] 2025-04-20 03:38:20,028 | INFO     | 
[2025-04-19 23:38:43] 2025-04-20 03:38:20,028 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 23:38:43] 2025-04-20 03:38:20,242 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,243 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,247 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 23:38:43] 2025-04-20 03:38:20,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 23:38:43] 2025-04-20 03:38:20,248 | INFO     | job 6606393748 has completed (purged errors)
[2025-04-19 23:38:43] 2025-04-20 03:38:20,248 | INFO     | overall cleanup function is called
[2025-04-19 23:38:43] 2025-04-20 03:38:21,264 | INFO     | --- collectZombieJob: --- 10, [3053]
[2025-04-19 23:38:43] 2025-04-20 03:38:21,264 | INFO     | zombie collector waiting for pid 3053
[2025-04-19 23:38:43] 2025-04-20 03:38:21,264 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 23:38:43] 2025-04-20 03:38:21,264 | INFO     | collected zombie processes
[2025-04-19 23:38:43] 2025-04-20 03:38:21,265 | INFO     | will attempt to kill all subprocesses of pid=3053
[2025-04-19 23:38:43] 2025-04-20 03:38:23,423 | INFO     | process IDs to be killed: [3053] (in reverse order)
[2025-04-19 23:38:43] 2025-04-20 03:38:28,844 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 23:38:43] 2025-04-20 03:38:28,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 23:38:43] 2025-04-20 03:38:29,032 | INFO     | did not find any defunct processes belonging to 3053
[2025-04-19 23:38:43] 2025-04-20 03:38:29,239 | INFO     | did not find any defunct processes belonging to 3053
[2025-04-19 23:38:43] 2025-04-20 03:38:29,240 | INFO     | ready for new job
[2025-04-19 23:38:43] 2025-04-20 03:38:29,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 23:38:43] 2025-04-20 03:38:29,286 | INFO     | **************************************
[2025-04-19 23:38:43] 2025-04-20 03:38:29,287 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 23:38:43] 2025-04-20 03:38:29,313 | INFO     | **************************************
[2025-04-19 23:38:43] 2025-04-20 03:38:29,313 | INFO     | 
[2025-04-19 23:38:43] 2025-04-20 03:38:29,339 | INFO     | architecture information:
[2025-04-19 23:38:43] 2025-04-20 03:38:29,356 | INFO     | executing command: cat /etc/os-release
[2025-04-19 23:38:43] 2025-04-20 03:38:29,579 | INFO     | cat /etc/os-release:
[2025-04-19 23:38:43] NAME="CentOS Linux"
[2025-04-19 23:38:43] VERSION="7 (Core)"
[2025-04-19 23:38:43] ID="centos"
[2025-04-19 23:38:43] ID_LIKE="rhel fedora"
[2025-04-19 23:38:43] VERSION_ID="7"
[2025-04-19 23:38:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 23:38:43] ANSI_COLOR="0;31"
[2025-04-19 23:38:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 23:38:43] HOME_URL="https://www.centos.org/"
[2025-04-19 23:38:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 23:38:43] 
[2025-04-19 23:38:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 23:38:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 23:38:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 23:38:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 23:38:43] 
[2025-04-19 23:38:43] 2025-04-20 03:38:29,584 | INFO     | **************************************
[2025-04-19 23:38:43] 2025-04-20 03:38:30,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 23:38:43] 2025-04-20 03:38:30,454 | INFO     | sufficient remaining disk space (56946065408 B)
[2025-04-19 23:38:43] 2025-04-20 03:38:30,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 23:38:43] 2025-04-20 03:38:30,454 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 23:38:43] 2025-04-20 03:38:30,454 | INFO     | update_server=False
[2025-04-19 23:38:43] 2025-04-20 03:38:30,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 23:38:43] 2025-04-20 03:38:30,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:38:43] 2025-04-20 03:38:30,455 | INFO     | aborting loop
[2025-04-19 23:38:43] 2025-04-20 03:38:30,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 23:38:43] 2025-04-20 03:38:30,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 23:38:43] 2025-04-20 03:38:31,026 | INFO     | all data control threads have been joined
[2025-04-19 23:38:43] 2025-04-20 03:38:31,258 | INFO     | all payload control threads have been joined
[2025-04-19 23:38:43] 2025-04-20 03:38:31,460 | INFO     | [job] retrieve thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:31,473 | INFO     | [job] job monitor thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,092 | INFO     | [data] control thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,124 | INFO     | all job control threads have been joined
[2025-04-19 23:38:43] 2025-04-20 03:38:32,264 | INFO     | [payload] control thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,283 | INFO     | [data] copytool_in thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,408 | INFO     | [payload] failed_post thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,422 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,828 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,854 | INFO     | [job] validate thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,834 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,885 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:32,891 | INFO     | [data] copytool_out thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:33,038 | INFO     | PID=38050 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 23:38:43] 2025-04-20 03:38:33,038 | INFO     | .. there are 41 such processes running
[2025-04-19 23:38:43] 2025-04-20 03:38:33,038 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 23:38:43] 2025-04-20 03:38:33,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 23:38:43] 2025-04-20 03:38:33,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 23:38:43] 2025-04-20 03:38:33,073 | INFO     | [payload] validate_post thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:33,130 | INFO     | [job] control thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:33,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:38:43] 2025-04-20 03:38:34,231 | INFO     | [job] queue monitor thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:34,479 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 23:38:43] 2025-04-20 03:38:35,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087106438976)>', '<ExcThread(monitor, started 140086532372224)>']
[2025-04-19 23:38:43] 2025-04-20 03:38:36,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 23:38:43] 2025-04-20 03:38:36,057 | INFO     | [monitor] control thread has ended
[2025-04-19 23:38:43] 2025-04-20 03:38:40,528 | INFO     | all workflow threads have been joined
[2025-04-19 23:38:43] 2025-04-20 03:38:40,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 23:38:43] 2025-04-20 03:38:40,528 | INFO     | traces error code: 0
[2025-04-19 23:38:43] 2025-04-20 03:38:40,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 23:38:43] 2025-04-20 03:38:40,937 [wrapper] ==== pilot stdout END ====
[2025-04-19 23:38:43] 2025-04-20 03:38:40,960 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 23:38:43] 2025-04-20 03:38:40,977 [wrapper] pilotpid: 38050
[2025-04-19 23:38:43] 2025-04-20 03:38:41,020 [wrapper] Pilot exit status: 0
[2025-04-19 23:38:43] 2025-04-20 03:38:41,166 [wrapper] pandaids: 6606393748
[2025-04-19 23:38:43] 2025-04-20 03:38:41,766 [wrapper] cleanup supervisor_pilot  1256 38051
[2025-04-19 23:38:43] 2025-04-20 03:38:41,939 [wrapper] Test setup, not cleaning
[2025-04-19 23:38:43] 2025-04-20 03:38:42,054 [wrapper] apfmon messages muted
[2025-04-19 23:38:43] 2025-04-20 03:38:42,103 [wrapper] ==== wrapper stdout END ====
[2025-04-19 23:38:43] 2025-04-20 03:38:42,146 [wrapper] ==== wrapper stderr END ====
[2025-04-19 23:38:43]  *** Error codes and diagnostics ***
[2025-04-19 23:38:43]     "exeErrorCode": 0,
[2025-04-19 23:38:43]     "exeErrorDiag": "",
[2025-04-19 23:38:43]     "pilotErrorCode": 0,
[2025-04-19 23:38:43]     "pilotErrorDiag": "",
[2025-04-19 23:38:43]  *** Listing of results directory ***
[2025-04-19 23:38:43] total 425820
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 06:44 pilot3.tar.gz
[2025-04-19 23:38:43] -rwx------ 1 boincer umatlas     37140 Apr 18 06:45 runpilot2-wrapper.sh
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 06:45 queuedata.json
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas       100 Apr 18 23:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 23:38:43] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 23:05 run_atlas
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas       105 Apr 18 23:05 job.xml
[2025-04-19 23:38:43] -rw-r--r-- 2 boincer umatlas 227267509 Apr 18 23:05 EVNT.44075481._002651.pool.root.1
[2025-04-19 23:38:43] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 23:05 start_atlas.sh
[2025-04-19 23:38:43] drwxrwx--x 2 boincer umatlas      4096 Apr 18 23:05 shared
[2025-04-19 23:38:43] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 23:05 input.tar.gz
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas         0 Apr 18 23:05 boinc_lockfile
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 23:06 pandaJob.out
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas       467 Apr 18 23:07 setup.sh.local
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas    991292 Apr 18 23:10 agis_schedconf.cvmfs.json
[2025-04-19 23:38:43] drwx------ 4 boincer umatlas      4096 Apr 18 23:11 pilot3
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas      6229 Apr 19 23:28 init_data.xml
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas 191702940 Apr 19 23:31 HITS.44075483._068248.pool.root.1
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas       531 Apr 19 23:31 boinc_task_state.xml
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas      1058 Apr 19 23:36 memory_monitor_summary.json
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas   1618536 Apr 19 23:36 agis_ddmendpoints.agis.ALL.json
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas    988668 Apr 19 23:36 log.44075483._068248.job.log.tgz.1
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas      7765 Apr 19 23:38 heartbeat.json
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas        95 Apr 19 23:38 pilot_heartbeat.json
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 23:38 boinc_mmap_file
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas        28 Apr 19 23:38 wrapper_checkpoint.txt
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas      4746 Apr 19 23:38 pilotlog.txt
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas   5612022 Apr 19 23:38 log.44075483._068248.job.log.1
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas       357 Apr 19 23:38 output.list
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas       620 Apr 19 23:38 runtime_log
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas   6615040 Apr 19 23:38 result.tar.gz
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas       664 Apr 19 23:38 zxKKDmbOyP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmB54KDmck5g9m.diag
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas     11421 Apr 19 23:38 runtime_log.err
[2025-04-19 23:38:43] -rw-r--r-- 1 boincer umatlas     21610 Apr 19 23:38 stderr.txt
[2025-04-19 23:38:43] HITS file was successfully produced:
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas 191702940 Apr 19 23:31 shared/HITS.pool.root.1
[2025-04-19 23:38:43]  *** Contents of shared directory: ***
[2025-04-19 23:38:43] total 416144
[2025-04-19 23:38:43] -rw-r--r-- 2 boincer umatlas 227267509 Apr 18 23:05 ATLAS.root_0
[2025-04-19 23:38:43] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 23:05 start_atlas.sh
[2025-04-19 23:38:43] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 23:05 input.tar.gz
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas 191702940 Apr 19 23:31 HITS.pool.root.1
[2025-04-19 23:38:43] -rw------- 1 boincer umatlas   6615040 Apr 19 23:38 result.tar.gz
23:38:46 (16378): run_atlas exited; CPU time 60948.812549
23:38:46 (16378): called boinc_finish(0)

</stderr_txt>
]]>

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