Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:06:32 (740115): wrapper (7.7.26015): starting
16:06:32 (740115): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 16:06:32] Arguments: --nthreads 3
[2025-04-19 16:06:32] Threads: 3
[2025-04-19 16:06:32] Checking for CVMFS
[2025-04-19 16:06:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 16:06:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 16:06:32] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 16:06:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 16:06:32] 2.9.2.0 3594848 4616 86540 145039 1 56 26466398 36864000 0 130560 0 3382380 99.991 1101385 16746 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 16:06:32] CVMFS is ok
[2025-04-19 16:06:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 16:06:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 16:06:32] Further information can be found at the LHC@home message board.
[2025-04-19 16:06:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 16:06:32] Checking for apptainer binary...
[2025-04-19 16:06:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 16:06:32] Running /usr/bin/apptainer --version
[2025-04-19 16:06:32] apptainer version 1.3.6-4.2
[2025-04-19 16:06:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 16:06:32] thA323
[2025-04-19 16:06:32] apptainer works
[2025-04-19 16:06:32] Set ATHENA_PROC_NUMBER=3
[2025-04-19 16:06:32] Set ATHENA_CORE_NUMBER=3
[2025-04-19 16:06:32] Starting ATLAS job with PandaID=6607056462
[2025-04-19 16:06:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 17:35:39]  *** The last 200 lines of the pilot log: ***
[2025-04-19 17:35:39]  protocol_id=None
[2025-04-19 17:35:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 17:35:39]  replicas=None
[2025-04-19 17:35:39]  scope=mc23_13p6TeV
[2025-04-19 17:35:39]  status=None
[2025-04-19 17:35:39]  status_code=0
[2025-04-19 17:35:39]  storage_token=
[2025-04-19 17:35:39]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6607056462/log.44075483._075198.job.log.tgz.1
[2025-04-19 17:35:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/5b/log.44075483._075198.job.log.tgz.1
[2025-04-19 17:35:39]  workdir=None
[2025-04-19 17:35:39] ]
[2025-04-19 17:35:39] 2025-04-19 15:35:10,744 | INFO     | transferring file log.44075483._075198.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6607056462/log.44075483._075198.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 17:35:39] 2025-04-19 15:35:10,744 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6607056462/log.44075483._075198.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0751
[2025-04-19 17:35:39] 2025-04-19 15:35:10,758 | INFO     | adding to output.list: log.44075483._075198.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/5b/log.44075483._075198.job.log.tg
[2025-04-19 17:35:39] 2025-04-19 15:35:10,759 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 17:35:39] 2025-04-19 15:35:10,759 | INFO     | summary of transferred files:
[2025-04-19 17:35:39] 2025-04-19 15:35:10,759 | INFO     |  -- lfn=log.44075483._075198.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 17:35:39] 2025-04-19 15:35:10,759 | INFO     | stage-out finished correctly
[2025-04-19 17:35:39] 2025-04-19 15:35:10,942 | WARNING  | process 750220 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 17:35:39] 2025-04-19 15:35:10,942 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607056462/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 17:35:39] 2025-04-19 15:35:10,994 | INFO     | number of running child processes to parent process 750220: 1
[2025-04-19 17:35:39] 2025-04-19 15:35:10,994 | INFO     | maximum number of monitored processes: 6
[2025-04-19 17:35:39] 2025-04-19 15:35:11,505 | INFO     | 5314s have passed since pilot start - server update state is 'RUNNING'
[2025-04-19 17:35:39] 2025-04-19 15:35:13,498 | INFO     | monitor loop #408: job 0:6607056462 is in state 'finished'
[2025-04-19 17:35:39] 2025-04-19 15:35:13,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 17:35:39] 2025-04-19 15:35:14,125 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 17:35:39] 2025-04-19 15:35:15,676 | INFO     | job 6607056462 has state=finished
[2025-04-19 17:35:39] 2025-04-19 15:35:15,676 | INFO     | preparing for final server update for job 6607056462 in state='finished'
[2025-04-19 17:35:39] 2025-04-19 15:35:15,677 | INFO     | this job has now completed (state=finished)
[2025-04-19 17:35:39] 2025-04-19 15:35:15,677 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 17:35:39] 2025-04-19 15:35:15,677 | INFO     | log transfer has been attempted: DONE
[2025-04-19 17:35:39] 2025-04-19 15:35:15,677 | INFO     | job 6607056462 has finished - writing final server update
[2025-04-19 17:35:39] 2025-04-19 15:35:15,677 | INFO     | total number of processed events: 400 (read)
[2025-04-19 17:35:39] 2025-04-19 15:35:15,678 | INFO     | executing command: lscpu
[2025-04-19 17:35:39] 2025-04-19 15:35:15,695 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 17:35:39] 2025-04-19 15:35:16,002 | INFO     | monitor loop #409: job 0:6607056462 is in state 'finished'
[2025-04-19 17:35:39] 2025-04-19 15:35:16,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 17:35:39] 2025-04-19 15:35:18,505 | INFO     | monitor loop #410: job 0:6607056462 is in state 'finished'
[2025-04-19 17:35:39] 2025-04-19 15:35:18,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 17:35:39] 2025-04-19 15:35:19,401 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 17:35:39] 2025-04-19 15:35:19,401 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607056462/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 17:35:39] 2025-04-19 15:35:19,401 | INFO     | extracted standard info from prmon json
[2025-04-19 17:35:39] 2025-04-19 15:35:19,401 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 17:35:39] 2025-04-19 15:35:19,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 17:35:39] 2025-04-19 15:35:19,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 17:35:39] 2025-04-19 15:35:19,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 17:35:39] 2025-04-19 15:35:19,402 | INFO     | fitting pss+swap vs Time
[2025-04-19 17:35:39] 2025-04-19 15:35:19,402 | INFO     | sum of square deviations: 158737860.0
[2025-04-19 17:35:39] 2025-04-19 15:35:19,402 | INFO     | sum of deviations: 13724685301.0
[2025-04-19 17:35:39] 2025-04-19 15:35:19,402 | INFO     | mean x: 1745074332.5
[2025-04-19 17:35:39] 2025-04-19 15:35:19,402 | INFO     | mean y: 2377349.0
[2025-04-19 17:35:39] 2025-04-19 15:35:19,402 | INFO     | -- intersect: -150879057240.17197
[2025-04-19 17:35:39] 2025-04-19 15:35:19,402 | INFO     | intersect: -150879057240.17197
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | chi2: 1.6963179343786945
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | -- intersect: -150879057240.17197
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | current memory leak: 86.46 B/s (using 80 data points, chi2=1.70)
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | ..............................
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | . Timing measurements:
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | . get job = 0 s
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | . initial setup = 1 s
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | . payload setup = 3 s
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | . stage-in = 0 s
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | . payload execution = 5292 s
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | . stage-out = 0 s
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | . log creation = 0 s
[2025-04-19 17:35:39] 2025-04-19 15:35:19,403 | INFO     | ..............................
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | 
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | job summary report
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | --------------------------------------------------
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | PanDA job id: 6607056462
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | task id: 44075483
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | errors: (none)
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | pilot state: finished 
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | transexitcode: 0
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | exeerrorcode: 0
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | exeerrordiag: 
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | exitcode: 0
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | exitmsg: OK
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | cpuconsumptiontime: 13953 s
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | nevents: 400
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | neventsw: 0
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | pid: 750220
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | pgrp: 750220
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | corecount: 3
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | event service: False
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | sizes: {0: 2426827, 3: 2427033, 11: 2427061, 5299: 2462524, 5303: 2462524, 5308: 2462694}
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | --------------------------------------------------
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | 
[2025-04-19 17:35:39] 2025-04-19 15:35:19,435 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,448 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 17:35:39] 2025-04-19 15:35:19,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 17:35:39] 2025-04-19 15:35:19,449 | INFO     | job 6607056462 has completed (purged errors)
[2025-04-19 17:35:39] 2025-04-19 15:35:19,449 | INFO     | overall cleanup function is called
[2025-04-19 17:35:39] 2025-04-19 15:35:20,455 | INFO     | --- collectZombieJob: --- 10, [750220]
[2025-04-19 17:35:39] 2025-04-19 15:35:20,455 | INFO     | zombie collector waiting for pid 750220
[2025-04-19 17:35:39] 2025-04-19 15:35:20,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 17:35:39] 2025-04-19 15:35:20,456 | INFO     | collected zombie processes
[2025-04-19 17:35:39] 2025-04-19 15:35:20,456 | INFO     | will attempt to kill all subprocesses of pid=750220
[2025-04-19 17:35:39] 2025-04-19 15:35:20,516 | INFO     | process IDs to be killed: [750220] (in reverse order)
[2025-04-19 17:35:39] 2025-04-19 15:35:20,547 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 17:35:39] 2025-04-19 15:35:20,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 17:35:39] 2025-04-19 15:35:20,549 | INFO     | did not find any defunct processes belonging to 750220
[2025-04-19 17:35:39] 2025-04-19 15:35:20,550 | INFO     | did not find any defunct processes belonging to 750220
[2025-04-19 17:35:39] 2025-04-19 15:35:20,550 | INFO     | ready for new job
[2025-04-19 17:35:39] 2025-04-19 15:35:20,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 17:35:39] 2025-04-19 15:35:20,551 | INFO     | **************************************
[2025-04-19 17:35:39] 2025-04-19 15:35:20,551 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 17:35:39] 2025-04-19 15:35:20,551 | INFO     | **************************************
[2025-04-19 17:35:39] 2025-04-19 15:35:20,551 | INFO     | 
[2025-04-19 17:35:39] 2025-04-19 15:35:20,551 | INFO     | architecture information:
[2025-04-19 17:35:39] 2025-04-19 15:35:20,552 | INFO     | executing command: cat /etc/os-release
[2025-04-19 17:35:39] 2025-04-19 15:35:20,561 | INFO     | cat /etc/os-release:
[2025-04-19 17:35:39] NAME="CentOS Linux"
[2025-04-19 17:35:39] VERSION="7 (Core)"
[2025-04-19 17:35:39] ID="centos"
[2025-04-19 17:35:39] ID_LIKE="rhel fedora"
[2025-04-19 17:35:39] VERSION_ID="7"
[2025-04-19 17:35:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 17:35:39] ANSI_COLOR="0;31"
[2025-04-19 17:35:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 17:35:39] HOME_URL="https://www.centos.org/"
[2025-04-19 17:35:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 17:35:39] 
[2025-04-19 17:35:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 17:35:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 17:35:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 17:35:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 17:35:39] 
[2025-04-19 17:35:39] 2025-04-19 15:35:20,561 | INFO     | **************************************
[2025-04-19 17:35:39] 2025-04-19 15:35:21,065 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 17:35:39] 2025-04-19 15:35:21,078 | INFO     | sufficient remaining disk space (273306091520 B)
[2025-04-19 17:35:39] 2025-04-19 15:35:21,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 17:35:39] 2025-04-19 15:35:21,078 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 17:35:39] 2025-04-19 15:35:21,078 | INFO     | update_server=False
[2025-04-19 17:35:39] 2025-04-19 15:35:21,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 17:35:39] 2025-04-19 15:35:21,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 17:35:39] 2025-04-19 15:35:21,078 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 17:35:39] 2025-04-19 15:35:21,079 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 17:35:39] 2025-04-19 15:35:21,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 17:35:39] 2025-04-19 15:35:21,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 17:35:39] 2025-04-19 15:35:21,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 17:35:39] 2025-04-19 15:35:21,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 17:35:39] 2025-04-19 15:35:21,446 | INFO     | all payload control threads have been joined
[2025-04-19 17:35:39] 2025-04-19 15:35:21,764 | INFO     | all data control threads have been joined
[2025-04-19 17:35:39] 2025-04-19 15:35:22,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 17:35:39] 2025-04-19 15:35:22,014 | INFO     | aborting loop
[2025-04-19 17:35:39] 2025-04-19 15:35:22,084 | INFO     | [job] retrieve thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:22,084 | INFO     | [job] queue monitor thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:22,276 | INFO     | all job control threads have been joined
[2025-04-19 17:35:39] 2025-04-19 15:35:22,451 | INFO     | [payload] control thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:22,605 | INFO     | [payload] validate_post thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:22,770 | INFO     | [data] control thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:23,020 | INFO     | [job] job monitor thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:23,132 | INFO     | [payload] failed_post thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:23,162 | INFO     | [data] copytool_in thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:23,282 | INFO     | [job] control thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:23,307 | INFO     | [data] copytool_out thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:23,356 | INFO     | [job] validate thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:23,376 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:23,460 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:23,507 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:25,085 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:31,985 | INFO     | job.realtimelogging is not enabled
[2025-04-19 17:35:39] 2025-04-19 15:35:32,991 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 17:35:39] 2025-04-19 15:35:34,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632802105152)>', '<ExcThread(monitor, started 139631777531648)>']
[2025-04-19 17:35:39] 2025-04-19 15:35:34,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 17:35:39] 2025-04-19 15:35:34,146 | INFO     | [monitor] control thread has ended
[2025-04-19 17:35:39] 2025-04-19 15:35:39,047 | INFO     | all workflow threads have been joined
[2025-04-19 17:35:39] 2025-04-19 15:35:39,047 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 17:35:39] 2025-04-19 15:35:39,047 | INFO     | traces error code: 0
[2025-04-19 17:35:39] 2025-04-19 15:35:39,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 17:35:39] 2025-04-19 15:35:39,097 [wrapper] ==== pilot stdout END ====
[2025-04-19 17:35:39] 2025-04-19 15:35:39,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 17:35:39] 2025-04-19 15:35:39,102 [wrapper] pilotpid: 743765
[2025-04-19 17:35:39] 2025-04-19 15:35:39,105 [wrapper] Pilot exit status: 0
[2025-04-19 17:35:39] 2025-04-19 15:35:39,113 [wrapper] pandaids: 6607056462
[2025-04-19 17:35:39] 2025-04-19 15:35:39,133 [wrapper] cleanup supervisor_pilot  762526 743766
[2025-04-19 17:35:39] 2025-04-19 15:35:39,136 [wrapper] Test setup, not cleaning
[2025-04-19 17:35:39] 2025-04-19 15:35:39,139 [wrapper] apfmon messages muted
[2025-04-19 17:35:39] 2025-04-19 15:35:39,141 [wrapper] ==== wrapper stdout END ====
[2025-04-19 17:35:39] 2025-04-19 15:35:39,143 [wrapper] ==== wrapper stderr END ====
[2025-04-19 17:35:39]  *** Error codes and diagnostics ***
[2025-04-19 17:35:39]     "exeErrorCode": 0,
[2025-04-19 17:35:39]     "exeErrorDiag": "",
[2025-04-19 17:35:39]     "pilotErrorCode": 0,
[2025-04-19 17:35:39]     "pilotErrorDiag": "",
[2025-04-19 17:35:39]  *** Listing of results directory ***
[2025-04-19 17:35:39] total 416652
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc    495897 Apr 19 02:12 pilot3.tar.gz
[2025-04-19 17:35:39] -rwx------ 1 boinc boinc     37140 Apr 19 02:13 runpilot2-wrapper.sh
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc      5111 Apr 19 02:13 queuedata.json
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc       100 Apr 19 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 17:35:39] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 16:06 run_atlas
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc       105 Apr 19 16:06 job.xml
[2025-04-19 17:35:39] -rw-r--r-- 2 boinc boinc 226592185 Apr 19 16:06 EVNT.44075481._002919.pool.root.1
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc      6929 Apr 19 16:06 init_data.xml
[2025-04-19 17:35:39] drwxrwx--x 2 boinc boinc      4096 Apr 19 16:06 shared
[2025-04-19 17:35:39] -rw-r--r-- 2 boinc boinc    508885 Apr 19 16:06 input.tar.gz
[2025-04-19 17:35:39] -rw-r--r-- 2 boinc boinc     17569 Apr 19 16:06 start_atlas.sh
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc         0 Apr 19 16:06 boinc_lockfile
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc      2579 Apr 19 16:06 pandaJob.out
[2025-04-19 17:35:39] -rw------- 1 boinc boinc       424 Apr 19 16:06 setup.sh.local
[2025-04-19 17:35:39] -rw------- 1 boinc boinc    991292 Apr 19 16:06 agis_schedconf.cvmfs.json
[2025-04-19 17:35:39] -rw------- 1 boinc boinc   1618536 Apr 19 16:06 agis_ddmendpoints.agis.ALL.json
[2025-04-19 17:35:39] drwx------ 4 boinc boinc      4096 Apr 19 16:06 pilot3
[2025-04-19 17:35:39] -rw------- 1 boinc boinc 194714111 Apr 19 17:34 HITS.44075483._075198.pool.root.1
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc       529 Apr 19 17:35 boinc_task_state.xml
[2025-04-19 17:35:39] -rw------- 1 boinc boinc      1017 Apr 19 17:35 memory_monitor_summary.json
[2025-04-19 17:35:39] -rw------- 1 boinc boinc        95 Apr 19 17:35 pilot_heartbeat.json
[2025-04-19 17:35:39] -rw------- 1 boinc boinc    227261 Apr 19 17:35 log.44075483._075198.job.log.tgz.1
[2025-04-19 17:35:39] -rw------- 1 boinc boinc      7644 Apr 19 17:35 heartbeat.json
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc        27 Apr 19 17:35 wrapper_checkpoint.txt
[2025-04-19 17:35:39] -rw------- 1 boinc boinc      4552 Apr 19 17:35 pilotlog.txt
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc      8192 Apr 19 17:35 boinc_mmap_file
[2025-04-19 17:35:39] -rw------- 1 boinc boinc    511985 Apr 19 17:35 log.44075483._075198.job.log.1
[2025-04-19 17:35:39] -rw------- 1 boinc boinc       357 Apr 19 17:35 output.list
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc       620 Apr 19 17:35 runtime_log
[2025-04-19 17:35:39] -rw------- 1 boinc boinc    757760 Apr 19 17:35 result.tar.gz
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc     11099 Apr 19 17:35 runtime_log.err
[2025-04-19 17:35:39] -rw------- 1 boinc boinc       658 Apr 19 17:35 cuEODmd0AQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmlo5KDmX9FjFm.diag
[2025-04-19 17:35:39] -rw-r--r-- 1 boinc boinc     21716 Apr 19 17:35 stderr.txt
[2025-04-19 17:35:39] HITS file was successfully produced:
[2025-04-19 17:35:39] -rw------- 1 boinc boinc 194714111 Apr 19 17:34 shared/HITS.pool.root.1
[2025-04-19 17:35:39]  *** Contents of shared directory: ***
[2025-04-19 17:35:39] total 412704
[2025-04-19 17:35:39] -rw-r--r-- 2 boinc boinc 226592185 Apr 19 16:06 ATLAS.root_0
[2025-04-19 17:35:39] -rw-r--r-- 2 boinc boinc    508885 Apr 19 16:06 input.tar.gz
[2025-04-19 17:35:39] -rw-r--r-- 2 boinc boinc     17569 Apr 19 16:06 start_atlas.sh
[2025-04-19 17:35:39] -rw------- 1 boinc boinc 194714111 Apr 19 17:34 HITS.pool.root.1
[2025-04-19 17:35:39] -rw------- 1 boinc boinc    757760 Apr 19 17:35 result.tar.gz
17:35:40 (740115): run_atlas exited; CPU time 13979.505761
17:35:40 (740115): called boinc_finish(0)

</stderr_txt>
]]>

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