Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 14:41:42 (52084): Detected: vboxwrapper 26206
2025-04-19 14:41:42 (52084): Detected: BOINC client v8.0.2
2025-04-19 14:41:42 (52084): Detected: VirtualBox VboxManage Interface (Version: 7.0.24)
2025-04-19 14:41:42 (52084): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 14:41:43 (52084): Create VM. (boinc_27b04afc54d70fc0, slot#4)
2025-04-19 14:41:43 (52084): Setting Memory Size for VM. (4600MB)
2025-04-19 14:41:44 (52084): Setting CPU Count for VM. (6)
2025-04-19 14:41:44 (52084): Setting Chipset Options for VM.
2025-04-19 14:41:44 (52084): Setting Graphics Controller Options for VM.
2025-04-19 14:41:44 (52084): Setting Boot Options for VM.
2025-04-19 14:41:45 (52084): Setting Network Configuration for NAT.
2025-04-19 14:41:45 (52084): Enabling VM Network Access.
2025-04-19 14:41:45 (52084): Disabling USB Support for VM.
2025-04-19 14:41:45 (52084): Disabling COM Port Support for VM.
2025-04-19 14:41:46 (52084): Disabling LPT Port Support for VM.
2025-04-19 14:41:46 (52084): Disabling Audio Support for VM.
2025-04-19 14:41:46 (52084): Disabling Clipboard Support for VM.
2025-04-19 14:41:46 (52084): Disabling Drag and Drop Support for VM.
2025-04-19 14:41:47 (52084): Adding storage controller(s) to VM.
2025-04-19 14:41:47 (52084): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 14:41:47 (52084): Adding VirtualBox Guest Additions to VM.
2025-04-19 14:41:48 (52084): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 14:41:48 (52084): forwarding host port 59607 to guest port 80
2025-04-19 14:41:48 (52084): Enabling remote desktop for VM.
2025-04-19 14:41:49 (52084): Required extension pack not installed, remote desktop not enabled.
2025-04-19 14:41:49 (52084): Enabling shared directory for VM.
2025-04-19 14:41:49 (52084): Starting VM using VBoxManage interface. (boinc_27b04afc54d70fc0, slot#4)
2025-04-19 14:41:53 (52084): Successfully started VM. (PID = '46292')
2025-04-19 14:41:53 (52084): Reporting VM Process ID to BOINC.
2025-04-19 14:41:53 (52084): Guest Log: BIOS: VirtualBox 7.0.24
2025-04-19 14:41:53 (52084): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 14:41:53 (52084): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 14:41:53 (52084): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 14:41:53 (52084): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 14:41:53 (52084): Detected: Web Application Enabled (http://localhost:59607)
2025-04-19 14:41:53 (52084): Preference change detected
2025-04-19 14:41:53 (52084): Setting CPU throttle for VM. (100%)
2025-04-19 14:41:54 (52084): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 14:41:55 (52084): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 14:41:55 (52084): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 14:41:58 (52084): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 14:41:58 (52084): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 14:41:58 (52084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 14:42:04 (52084): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 14:42:04 (52084): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 14:42:08 (52084): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 14:42:08 (52084): Guest Log: 00:00:00.000182 main     Log opened 2025-04-19T14:42:07.173056000Z
2025-04-19 14:42:08 (52084): Guest Log: 00:00:00.000329 main     OS Product: Linux
2025-04-19 14:42:08 (52084): Guest Log: 00:00:00.000362 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 14:42:08 (52084): Guest Log: 00:00:00.000389 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 14:42:08 (52084): Guest Log: 00:00:00.000416 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 14:42:08 (52084): Guest Log: 00:00:00.000416 main     Process ID: 1334
2025-04-19 14:42:08 (52084): Guest Log: 00:00:00.000417 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 14:42:08 (52084): Guest Log: 00:00:00.000999 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 14:42:08 (52084): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 14:42:08 (52084): Guest Log: [INFO] Mounting shared directory
2025-04-19 14:42:08 (52084): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 14:42:14 (52084): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 14:42:14 (52084): Guest Log: [INFO] Detected branch: prod
2025-04-19 14:42:15 (52084): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 14:42:15 (52084): Guest Log: Copying input files
2025-04-19 14:42:16 (52084): Guest Log: Copied input files into RunAtlas.
2025-04-19 14:42:16 (52084): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 14:42:16 (52084): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 14:42:16 (52084): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 14:42:16 (52084): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 14:42:18 (52084): Guest Log: 00:00:10.015638 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 601 286 000ns (GuestNow=1 745 041 338 574 098 000 ns GuestLast=1 745 073 727 175 384 000 ns fSetTimeLastLoop=true )
2025-04-19 14:42:25 (52084): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 14:42:25 (52084): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 14:42:25 (52084): Guest Log: 2.6.3.0 1615 0 32184 145027 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 14:42:26 (52084): Guest Log: copied the webapp to /var/www
2025-04-19 14:42:26 (52084): Guest Log: ATHENA_PROC_NUMBER=6
2025-04-19 14:42:26 (52084): Guest Log: ATHENA_CORE_NUMBER=6
2025-04-19 14:42:26 (52084): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 14:42:26 (52084): Guest Log:  *** Starting ATLAS job. (PandaID=6607055846 taskID=44075483) ***
2025-04-19 15:47:53 (52084): Guest Log:  *** Job finished ***
2025-04-19 15:47:53 (52084): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:41,293 | INFO     | [payload] failed_post thread has finished
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:42,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:46,103 | INFO     | [data] queue_monitor thread has finished
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:47,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548816013120)>', '<ExcThread(monitor, started 140548199393024)>']
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:48,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:48,254 | INFO     | [monitor] control thread has ended
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,714 | INFO     | all workflow threads have been joined
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,714 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,714 | INFO     | traces error code: 0
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,763 [wrapper] ==== pilot stdout END ====
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,767 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,770 [wrapper] pilotpid: 5957
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,774 [wrapper] Pilot exit status: 0
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,861 [wrapper] pandaids: 6607055846
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,889 [wrapper] cleanup supervisor_pilot 21592 5958
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,896 [wrapper] Test setup, not cleaning
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,901 [wrapper] apfmon messages muted
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,905 [wrapper] ==== wrapper stdout END ====
2025-04-19 15:47:53 (52084): Guest Log: 2025-04-19 06:47:52,909 [wrapper] ==== wrapper stderr END ====
2025-04-19 15:47:53 (52084): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 15:47:53 (52084): Guest Log:     "exeErrorCode": 0,
2025-04-19 15:47:53 (52084): Guest Log:     "exeErrorDiag": "",
2025-04-19 15:47:53 (52084): Guest Log:     "pilotErrorCode": 0,
2025-04-19 15:47:53 (52084): Guest Log:     "pilotErrorDiag": "",
2025-04-19 15:47:53 (52084): Guest Log:  *** Listing of results directory ***
2025-04-19 15:47:53 (52084): Guest Log: total 196028
2025-04-19 15:47:53 (52084): Guest Log: -rw-r--r--. 1 atlas atlas    503527 Apr  3 07:42 pilot3.tar.gz
2025-04-19 15:47:53 (52084): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 19 00:11 queuedata.json
2025-04-19 15:47:53 (52084): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 19 00:12 runpilot2-wrapper.sh
2025-04-19 15:47:53 (52084): Guest Log: -rwxr-xr-x. 1 atlas atlas      9421 Apr 19 05:42 init_data.xml
2025-04-19 15:47:53 (52084): Guest Log: -rwxr-xr-x. 1 atlas atlas    517103 Apr 19 05:42 input.tar.gz
2025-04-19 15:47:53 (52084): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 19 05:42 start_atlas.sh
2025-04-19 15:47:53 (52084): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 05:42 EVNT.44075481._002918.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 15:47:53 (52084): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 19 05:42 pandaJob.out
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 05:42 setup.sh.local
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 19 05:43 agis_schedconf.cvmfs.json
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 05:43 agis_ddmendpoints.agis.ALL.json
2025-04-19 15:47:53 (52084): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 05:43 pilot3
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 06:46 pilot_heartbeat.json
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas 195692459 Apr 19 06:47 HITS.44075483._075170.pool.root.1
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas      1027 Apr 19 06:47 memory_monitor_summary.json
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas    253631 Apr 19 06:47 log.44075483._075170.job.log.tgz.1
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas      7724 Apr 19 06:47 heartbeat.json
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 19 06:47 pilotlog.txt
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas    363182 Apr 19 06:47 log.44075483._075170.job.log.1
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 06:47 output.list
2025-04-19 15:47:53 (52084): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 06:47 runtime_log
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas    634880 Apr 19 06:47 result.tar.gz
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas       650 Apr 19 06:47 VNvMDmfzAQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmRUgLDmyeHRgm.diag
2025-04-19 15:47:53 (52084): Guest Log: -rw-r--r--. 1 atlas atlas     10935 Apr 19 06:47 runtime_log.err
2025-04-19 15:47:53 (52084): Guest Log: Looking for outputfile HITS.44075483._075170.pool.root.1
2025-04-19 15:47:53 (52084): Guest Log: HITS file was successfully produced
2025-04-19 15:47:53 (52084): Guest Log: -rw-------. 1 atlas atlas 195692459 Apr 19 06:47 /home/atlas/RunAtlas/HITS.44075483._075170.pool.root.1
2025-04-19 15:47:54 (52084): Guest Log: Successfully finished the ATLAS job!
2025-04-19 15:47:54 (52084): Guest Log: Copying the results back to the shared directory!
2025-04-19 15:47:54 (52084): Guest Log:  *** Contents of shared directory: ***
2025-04-19 15:47:54 (52084): Guest Log: total 409940
2025-04-19 15:47:54 (52084): Guest Log: -rwxrwxrwx. 1 root root 222893450 Apr 19 05:41 ATLAS.root_0
2025-04-19 15:47:54 (52084): Guest Log: -rwxrwxrwx. 1 root root 195692459 Apr 19 06:47 HITS.pool.root.1
2025-04-19 15:47:54 (52084): Guest Log: -rwxrwxrwx. 1 root root      9421 Apr 19 05:41 init_data.xml
2025-04-19 15:47:54 (52084): Guest Log: -rwxrwxrwx. 1 root root    517103 Apr 19 02:49 input.tar.gz
2025-04-19 15:47:54 (52084): Guest Log: -rwxrwxrwx. 1 root root    634880 Apr 19 06:47 result.tar.gz
2025-04-19 15:47:54 (52084): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 19 02:49 start_atlas.sh
2025-04-19 15:47:54 (52084): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 15:47:54 (52084): VM Completion File Detected.
2025-04-19 15:47:54 (52084): Powering off VM.
2025-04-19 15:47:55 (52084): Successfully stopped VM.
2025-04-19 15:47:55 (52084): Deregistering VM. (boinc_27b04afc54d70fc0, slot#4)
2025-04-19 15:47:55 (52084): Removing network bandwidth throttle group from VM.
2025-04-19 15:47:55 (52084): Removing VM from VirtualBox.
15:48:00 (52084): called boinc_finish(0)

</stderr_txt>
]]>

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