Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:52:16 (19761): wrapper (7.7.26015): starting
22:52:16 (19761): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 22:52:16] Arguments: --nthreads 8
[2025-04-18 22:52:16] Threads: 8
[2025-04-18 22:52:16] Checking for CVMFS
[2025-04-18 22:52:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 22:52:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 22:52:17] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 22:52:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 22:52:17] 2.11.2.0 3213 373803 243888 145023 3 187 10446602 20275201 917 130560 0 56212406 99.987 7773070 64865 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 22:52:17] CVMFS is ok
[2025-04-18 22:52:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 22:52:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 22:52:17] Further information can be found at the LHC@home message board.
[2025-04-18 22:52:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 22:52:17] Checking for apptainer binary...
[2025-04-18 22:52:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 22:52:17] Running /usr/bin/apptainer --version
[2025-04-18 22:52:17] apptainer version 1.3.2-1.el7
[2025-04-18 22:52:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 22:52:17] c-205-38.aglt2.org
[2025-04-18 22:52:17] apptainer works
[2025-04-18 22:52:17] Set ATHENA_PROC_NUMBER=8
[2025-04-18 22:52:17] Set ATHENA_CORE_NUMBER=8
[2025-04-18 22:52:17] Starting ATLAS job with PandaID=6606876008
[2025-04-18 22:52:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 23:58:41]  *** The last 200 lines of the pilot log: ***
[2025-04-18 23:58:41]  guid=dce033a1-8175-443a-ab5b-cedb7c6791d0
[2025-04-18 23:58:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 23:58:41]  is_altstaged=None
[2025-04-18 23:58:41]  is_tar=False
[2025-04-18 23:58:41]  lfn=log.44075483._074082.job.log.tgz.1
[2025-04-18 23:58:41]  mtime=0
[2025-04-18 23:58:41]  protocol_id=None
[2025-04-18 23:58:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 23:58:41]  replicas=None
[2025-04-18 23:58:41]  scope=mc23_13p6TeV
[2025-04-18 23:58:41]  status=None
[2025-04-18 23:58:41]  status_code=0
[2025-04-18 23:58:41]  storage_token=
[2025-04-18 23:58:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606876008/log.44075483._074082.job.log.tgz.1
[2025-04-18 23:58:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/84/log.44075483._074082.job.log.tgz.1
[2025-04-18 23:58:41]  workdir=None
[2025-04-18 23:58:41] ]
[2025-04-18 23:58:41] 2025-04-19 03:58:18,899 | INFO     | transferring file log.44075483._074082.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606876008/log.44075483._074082.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 23:58:41] 2025-04-19 03:58:18,900 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606876008/log.44075483._074082.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._074082.job
[2025-04-18 23:58:41] 2025-04-19 03:58:18,917 | INFO     | adding to output.list: log.44075483._074082.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/84/log.44075483._074082.job.log.tg
[2025-04-18 23:58:41] 2025-04-19 03:58:18,918 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 23:58:41] 2025-04-19 03:58:18,918 | INFO     | summary of transferred files:
[2025-04-18 23:58:41] 2025-04-19 03:58:18,918 | INFO     |  -- lfn=log.44075483._074082.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 23:58:41] 2025-04-19 03:58:18,918 | INFO     | stage-out finished correctly
[2025-04-18 23:58:41] 2025-04-19 03:58:18,967 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 23:58:41] 2025-04-19 03:58:19,011 | INFO     | job 6606876008 has state=finished
[2025-04-18 23:58:41] 2025-04-19 03:58:19,012 | INFO     | preparing for final server update for job 6606876008 in state='finished'
[2025-04-18 23:58:41] 2025-04-19 03:58:19,012 | INFO     | this job has now completed (state=finished)
[2025-04-18 23:58:41] 2025-04-19 03:58:19,012 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 23:58:41] 2025-04-19 03:58:19,012 | INFO     | log transfer has been attempted: DONE
[2025-04-18 23:58:41] 2025-04-19 03:58:19,013 | INFO     | job 6606876008 has finished - writing final server update
[2025-04-18 23:58:41] 2025-04-19 03:58:19,013 | INFO     | total number of processed events: 400 (read)
[2025-04-18 23:58:41] 2025-04-19 03:58:19,015 | INFO     | executing command: lscpu
[2025-04-18 23:58:41] 2025-04-19 03:58:19,044 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 23:58:41] 2025-04-19 03:58:21,327 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 23:58:41] 2025-04-19 03:58:21,328 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606876008/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 23:58:41] 2025-04-19 03:58:21,329 | INFO     | extracted standard info from prmon json
[2025-04-18 23:58:41] 2025-04-19 03:58:21,329 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 23:58:41] 2025-04-19 03:58:21,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 23:58:41] 2025-04-19 03:58:21,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 23:58:41] 2025-04-19 03:58:21,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 23:58:41] 2025-04-19 03:58:21,331 | INFO     | fitting pss+swap vs Time
[2025-04-18 23:58:41] 2025-04-19 03:58:21,331 | INFO     | sum of square deviations: 60482994.5
[2025-04-18 23:58:41] 2025-04-19 03:58:21,332 | INFO     | sum of deviations: 13760473726.499998
[2025-04-18 23:58:41] 2025-04-19 03:58:21,332 | INFO     | mean x: 1745033208.5
[2025-04-18 23:58:41] 2025-04-19 03:58:21,332 | INFO     | mean y: 2379925.224137931
[2025-04-18 23:58:41] 2025-04-19 03:58:21,332 | INFO     | -- intersect: -397009768959.60406
[2025-04-18 23:58:41] 2025-04-19 03:58:21,332 | INFO     | intersect: -397009768959.60406
[2025-04-18 23:58:41] 2025-04-19 03:58:21,332 | INFO     | chi2: 1.7724532556533865
[2025-04-18 23:58:41] 2025-04-19 03:58:21,333 | INFO     | -- intersect: -397009768959.60406
[2025-04-18 23:58:41] 2025-04-19 03:58:21,333 | INFO     | current memory leak: 227.51 B/s (using 58 data points, chi2=1.77)
[2025-04-18 23:58:41] 2025-04-19 03:58:21,333 | INFO     | ..............................
[2025-04-18 23:58:41] 2025-04-19 03:58:21,333 | INFO     | . Timing measurements:
[2025-04-18 23:58:41] 2025-04-19 03:58:21,333 | INFO     | . get job = 0 s
[2025-04-18 23:58:41] 2025-04-19 03:58:21,333 | INFO     | . initial setup = 2 s
[2025-04-18 23:58:41] 2025-04-19 03:58:21,334 | INFO     | . payload setup = 3 s
[2025-04-18 23:58:41] 2025-04-19 03:58:21,334 | INFO     | . stage-in = 0 s
[2025-04-18 23:58:41] 2025-04-19 03:58:21,334 | INFO     | . payload execution = 3932 s
[2025-04-18 23:58:41] 2025-04-19 03:58:21,334 | INFO     | . stage-out = 0 s
[2025-04-18 23:58:41] 2025-04-19 03:58:21,334 | INFO     | . log creation = 0 s
[2025-04-18 23:58:41] 2025-04-19 03:58:21,334 | INFO     | ..............................
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | 
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | job summary report
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | --------------------------------------------------
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | PanDA job id: 6606876008
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | task id: 44075483
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | errors: (none)
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | pilot state: finished 
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | transexitcode: 0
[2025-04-18 23:58:41] 2025-04-19 03:58:21,411 | INFO     | exeerrorcode: 0
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | exeerrordiag: 
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | exitcode: 0
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | exitmsg: OK
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | cpuconsumptiontime: 24574 s
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | nevents: 400
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | neventsw: 0
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | pid: 29760
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | pgrp: 29760
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | corecount: 8
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | event service: False
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | sizes: {0: 2426823, 3: 2427029, 11: 2427057, 3940: 2452884, 3941: 2461881, 3943: 2461995}
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | --------------------------------------------------
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | 
[2025-04-18 23:58:41] 2025-04-19 03:58:21,412 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 23:58:41] 2025-04-19 03:58:21,434 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,434 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,434 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,434 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,434 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,434 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,434 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,434 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,434 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 23:58:41] 2025-04-19 03:58:21,435 | INFO     | job 6606876008 has completed (purged errors)
[2025-04-18 23:58:41] 2025-04-19 03:58:21,436 | INFO     | overall cleanup function is called
[2025-04-18 23:58:41] 2025-04-19 03:58:22,442 | INFO     | --- collectZombieJob: --- 10, [29760]
[2025-04-18 23:58:41] 2025-04-19 03:58:22,442 | INFO     | zombie collector waiting for pid 29760
[2025-04-18 23:58:41] 2025-04-19 03:58:22,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 23:58:41] 2025-04-19 03:58:22,442 | INFO     | collected zombie processes
[2025-04-18 23:58:41] 2025-04-19 03:58:22,442 | INFO     | will attempt to kill all subprocesses of pid=29760
[2025-04-18 23:58:41] 2025-04-19 03:58:22,542 | INFO     | process IDs to be killed: [29760] (in reverse order)
[2025-04-18 23:58:41] 2025-04-19 03:58:22,589 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 23:58:41] 2025-04-19 03:58:22,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 23:58:41] 2025-04-19 03:58:22,592 | INFO     | did not find any defunct processes belonging to 29760
[2025-04-18 23:58:41] 2025-04-19 03:58:22,594 | INFO     | did not find any defunct processes belonging to 29760
[2025-04-18 23:58:41] 2025-04-19 03:58:22,594 | INFO     | ready for new job
[2025-04-18 23:58:41] 2025-04-19 03:58:22,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 23:58:41] 2025-04-19 03:58:22,596 | INFO     | **************************************
[2025-04-18 23:58:41] 2025-04-19 03:58:22,596 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 23:58:41] 2025-04-19 03:58:22,596 | INFO     | **************************************
[2025-04-18 23:58:41] 2025-04-19 03:58:22,596 | INFO     | 
[2025-04-18 23:58:41] 2025-04-19 03:58:22,597 | INFO     | architecture information:
[2025-04-18 23:58:41] 2025-04-19 03:58:22,598 | INFO     | executing command: cat /etc/os-release
[2025-04-18 23:58:41] 2025-04-19 03:58:22,612 | INFO     | cat /etc/os-release:
[2025-04-18 23:58:41] NAME="CentOS Linux"
[2025-04-18 23:58:41] VERSION="7 (Core)"
[2025-04-18 23:58:41] ID="centos"
[2025-04-18 23:58:41] ID_LIKE="rhel fedora"
[2025-04-18 23:58:41] VERSION_ID="7"
[2025-04-18 23:58:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 23:58:41] ANSI_COLOR="0;31"
[2025-04-18 23:58:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 23:58:41] HOME_URL="https://www.centos.org/"
[2025-04-18 23:58:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 23:58:41] 
[2025-04-18 23:58:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 23:58:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 23:58:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 23:58:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 23:58:41] 
[2025-04-18 23:58:41] 2025-04-19 03:58:22,612 | INFO     | **************************************
[2025-04-18 23:58:41] 2025-04-19 03:58:23,115 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 23:58:41] 2025-04-19 03:58:23,132 | INFO     | sufficient remaining disk space (32774291456 B)
[2025-04-18 23:58:41] 2025-04-19 03:58:23,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 23:58:41] 2025-04-19 03:58:23,133 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 23:58:41] 2025-04-19 03:58:23,133 | INFO     | update_server=False
[2025-04-18 23:58:41] 2025-04-19 03:58:23,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 23:58:41] 2025-04-19 03:58:23,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:58:41] 2025-04-19 03:58:23,134 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 23:58:41] 2025-04-19 03:58:23,134 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 23:58:41] 2025-04-19 03:58:23,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 23:58:41] 2025-04-19 03:58:23,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 23:58:41] 2025-04-19 03:58:23,155 | INFO     | all data control threads have been joined
[2025-04-18 23:58:41] 2025-04-19 03:58:23,765 | INFO     | all payload control threads have been joined
[2025-04-18 23:58:41] 2025-04-19 03:58:24,138 | INFO     | [job] queue monitor thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:24,139 | INFO     | [job] retrieve thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:24,161 | INFO     | [data] control thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:24,451 | INFO     | [data] copytool_in thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:24,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 23:58:41] 2025-04-19 03:58:24,569 | WARNING  | process 29760 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 23:58:41] 2025-04-19 03:58:24,613 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 23:58:41] 2025-04-19 03:58:24,663 | INFO     | number of running child processes to parent process 29760: 1
[2025-04-18 23:58:41] 2025-04-19 03:58:24,663 | INFO     | maximum number of monitored processes: 6
[2025-04-18 23:58:41] 2025-04-19 03:58:24,663 | INFO     | aborting job monitoring since job object (job id=6606876008) has expired
[2025-04-18 23:58:41] 2025-04-19 03:58:24,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:58:41] 2025-04-19 03:58:24,663 | INFO     | will abort loop
[2025-04-18 23:58:41] 2025-04-19 03:58:24,679 | INFO     | [job] validate thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:24,771 | INFO     | [payload] control thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:24,785 | INFO     | all job control threads have been joined
[2025-04-18 23:58:41] 2025-04-19 03:58:24,910 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:24,967 | INFO     | [payload] failed_post thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:25,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 23:58:41] 2025-04-19 03:58:25,071 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:25,234 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:25,664 | INFO     | [job] job monitor thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:25,727 | INFO     | [payload] validate_post thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:25,790 | INFO     | [job] control thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:26,480 | INFO     | [data] copytool_out thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:29,022 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:34,083 | INFO     | job.realtimelogging is not enabled
[2025-04-18 23:58:41] 2025-04-19 03:58:35,088 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 23:58:41] 2025-04-19 03:58:36,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010628200256)>', '<ExcThread(monitor, started 140009726260992)>']
[2025-04-18 23:58:41] 2025-04-19 03:58:37,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 23:58:41] 2025-04-19 03:58:37,201 | INFO     | [monitor] control thread has ended
[2025-04-18 23:58:41] 2025-04-19 03:58:41,285 | INFO     | all workflow threads have been joined
[2025-04-18 23:58:41] 2025-04-19 03:58:41,285 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 23:58:41] 2025-04-19 03:58:41,286 | INFO     | traces error code: 0
[2025-04-18 23:58:41] 2025-04-19 03:58:41,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 23:58:41] 2025-04-19 03:58:41,399 [wrapper] ==== pilot stdout END ====
[2025-04-18 23:58:41] 2025-04-19 03:58:41,402 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 23:58:41] 2025-04-19 03:58:41,406 [wrapper] pilotpid: 23384
[2025-04-18 23:58:41] 2025-04-19 03:58:41,409 [wrapper] Pilot exit status: 0
[2025-04-18 23:58:41] 2025-04-19 03:58:41,419 [wrapper] pandaids: 6606876008
[2025-04-18 23:58:41] 2025-04-19 03:58:41,450 [wrapper] cleanup supervisor_pilot 23751 23385
[2025-04-18 23:58:41] 2025-04-19 03:58:41,452 [wrapper] Test setup, not cleaning
[2025-04-18 23:58:41] 2025-04-19 03:58:41,455 [wrapper] apfmon messages muted
[2025-04-18 23:58:41] 2025-04-19 03:58:41,458 [wrapper] ==== wrapper stdout END ====
[2025-04-18 23:58:41] 2025-04-19 03:58:41,461 [wrapper] ==== wrapper stderr END ====
[2025-04-18 23:58:41]  *** Error codes and diagnostics ***
[2025-04-18 23:58:41]     "exeErrorCode": 0,
[2025-04-18 23:58:41]     "exeErrorDiag": "",
[2025-04-18 23:58:41]     "pilotErrorCode": 0,
[2025-04-18 23:58:41]     "pilotErrorDiag": "",
[2025-04-18 23:58:41]  *** Listing of results directory ***
[2025-04-18 23:58:41] total 417416
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 16:50 pilot3.tar.gz
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 17:10 queuedata.json
[2025-04-18 23:58:41] -rwx------ 1 boincer umatlas     37140 Apr 18 17:12 runpilot2-wrapper.sh
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas       100 Apr 18 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 23:58:41] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 22:52 run_atlas
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas       105 Apr 18 22:52 job.xml
[2025-04-18 23:58:41] -rw-r--r-- 2 boincer umatlas 222526146 Apr 18 22:52 EVNT.44075481._002877.pool.root.1
[2025-04-18 23:58:41] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 22:52 start_atlas.sh
[2025-04-18 23:58:41] drwxrwx--x 2 boincer umatlas      4096 Apr 18 22:52 shared
[2025-04-18 23:58:41] -rw-r--r-- 2 boincer umatlas    508893 Apr 18 22:52 input.tar.gz
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas         0 Apr 18 22:52 boinc_lockfile
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 22:52 pandaJob.out
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas       424 Apr 18 22:52 setup.sh.local
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas    991292 Apr 18 22:52 agis_schedconf.cvmfs.json
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas   1618536 Apr 18 22:52 agis_ddmendpoints.agis.ALL.json
[2025-04-18 23:58:41] drwx------ 4 boincer umatlas      4096 Apr 18 22:52 pilot3
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas      6050 Apr 18 23:57 init_data.xml
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas 199629486 Apr 18 23:57 HITS.44075483._074082.pool.root.1
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas        95 Apr 18 23:57 pilot_heartbeat.json
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas       529 Apr 18 23:58 boinc_task_state.xml
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas      1045 Apr 18 23:58 memory_monitor_summary.json
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas    301121 Apr 18 23:58 log.44075483._074082.job.log.tgz.1
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas      7736 Apr 18 23:58 heartbeat.json
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 23:58 boinc_mmap_file
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas        27 Apr 18 23:58 wrapper_checkpoint.txt
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas      5065 Apr 18 23:58 pilotlog.txt
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas    404572 Apr 18 23:58 log.44075483._074082.job.log.1
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas       357 Apr 18 23:58 output.list
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas       620 Apr 18 23:58 runtime_log
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas    727040 Apr 18 23:58 result.tar.gz
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas     11013 Apr 18 23:58 runtime_log.err
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas       655 Apr 18 23:58 24yKDmXB8P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHBgLDmHQuc7n.diag
[2025-04-18 23:58:41] -rw-r--r-- 1 boincer umatlas     21242 Apr 18 23:58 stderr.txt
[2025-04-18 23:58:41] HITS file was successfully produced:
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas 199629486 Apr 18 23:57 shared/HITS.pool.root.1
[2025-04-18 23:58:41]  *** Contents of shared directory: ***
[2025-04-18 23:58:41] total 413500
[2025-04-18 23:58:41] -rw-r--r-- 2 boincer umatlas 222526146 Apr 18 22:52 ATLAS.root_0
[2025-04-18 23:58:41] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 22:52 start_atlas.sh
[2025-04-18 23:58:41] -rw-r--r-- 2 boincer umatlas    508893 Apr 18 22:52 input.tar.gz
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas 199629486 Apr 18 23:57 HITS.pool.root.1
[2025-04-18 23:58:41] -rw------- 1 boincer umatlas    727040 Apr 18 23:58 result.tar.gz
23:58:42 (19761): run_atlas exited; CPU time 24531.174870
23:58:42 (19761): called boinc_finish(0)

</stderr_txt>
]]>

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