Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:48:38 (1347151): wrapper (7.7.26015): starting
14:48:38 (1347151): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 14:48:38] Arguments: --nthreads 4
[2025-04-19 14:48:38] Threads: 4
[2025-04-19 14:48:38] Checking for CVMFS
[2025-04-19 14:48:38] No cvmfs_config command found, will try listing directly
[2025-04-19 14:48:38] CVMFS is ok
[2025-04-19 14:48:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 14:48:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 14:48:38] Further information can be found at the LHC@home message board.
[2025-04-19 14:48:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 14:48:38] Checking for apptainer binary...
[2025-04-19 14:48:38] which: no apptainer in ((null))
[2025-04-19 14:48:38] apptainer is not installed, using version from CVMFS
[2025-04-19 14:48:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 14:48:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-04-19 14:48:39] apptainer works
[2025-04-19 14:48:39] Set ATHENA_PROC_NUMBER=4
[2025-04-19 14:48:39] Set ATHENA_CORE_NUMBER=4
[2025-04-19 14:48:39] Starting ATLAS job with PandaID=6606785600
[2025-04-19 14:48:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 17:22:45]  *** The last 200 lines of the pilot log: ***
[2025-04-19 17:22:45] 2025-04-19 15:22:23,438 | INFO     | -- intersect: -89731671154.2992
[2025-04-19 17:22:45] 2025-04-19 15:22:23,438 | INFO     | intersect: -89731671154.2992
[2025-04-19 17:22:45] 2025-04-19 15:22:23,438 | INFO     | chi2: 4.457727943130187
[2025-04-19 17:22:45] 2025-04-19 15:22:23,438 | INFO     | sum of square deviations: 964976232.5
[2025-04-19 17:22:45] 2025-04-19 15:22:23,439 | INFO     | sum of deviations: 61271853819.99999
[2025-04-19 17:22:45] 2025-04-19 15:22:23,439 | INFO     | mean x: 1745071386.5
[2025-04-19 17:22:45] 2025-04-19 15:22:23,440 | INFO     | mean y: 2225877.178082192
[2025-04-19 17:22:45] 2025-04-19 15:22:23,440 | INFO     | -- intersect: -110802325880.6215
[2025-04-19 17:22:45] 2025-04-19 15:22:23,440 | INFO     | intersect: -110802325880.6215
[2025-04-19 17:22:45] 2025-04-19 15:22:23,440 | INFO     | chi2: 3.800051413977461
[2025-04-19 17:22:45] 2025-04-19 15:22:23,440 | INFO     | current chi2=3.800051413977461 (change=14.753626455967824 %)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,440 | INFO     | right removable region: 145
[2025-04-19 17:22:45] 2025-04-19 15:22:23,440 | INFO     | sum of square deviations: 964976232.5
[2025-04-19 17:22:45] 2025-04-19 15:22:23,441 | INFO     | sum of deviations: 21746179933.0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,441 | INFO     | mean x: 1745071691.5
[2025-04-19 17:22:45] 2025-04-19 15:22:23,441 | INFO     | mean y: 2265815.287671233
[2025-04-19 17:22:45] 2025-04-19 15:22:23,442 | INFO     | -- intersect: -39323721417.60893
[2025-04-19 17:22:45] 2025-04-19 15:22:23,442 | INFO     | intersect: -39323721417.60893
[2025-04-19 17:22:45] 2025-04-19 15:22:23,442 | INFO     | chi2: 2.0563599150468748
[2025-04-19 17:22:45] 2025-04-19 15:22:23,442 | INFO     | current chi2=2.0563599150468748 (change=53.86977533665025 %)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,443 | INFO     | sum of square deviations: 869188390.0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,443 | INFO     | sum of deviations: -3902761821.9999995
[2025-04-19 17:22:45] 2025-04-19 15:22:23,444 | INFO     | mean x: 1745071844.0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,444 | INFO     | mean y: 2306659.9078014186
[2025-04-19 17:22:45] 2025-04-19 15:22:23,444 | INFO     | -- intersect: 7837891957.371725
[2025-04-19 17:22:45] 2025-04-19 15:22:23,444 | INFO     | intersect: 7837891957.371725
[2025-04-19 17:22:45] 2025-04-19 15:22:23,444 | INFO     | chi2: 0.7448641991003709
[2025-04-19 17:22:45] 2025-04-19 15:22:23,444 | INFO     | current chi2=0.7448641991003709 (change=63.777537499636004 %)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,445 | INFO     | sum of square deviations: 779958810.0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,445 | INFO     | sum of deviations: -7222346289.5
[2025-04-19 17:22:45] 2025-04-19 15:22:23,445 | INFO     | mean x: 1745071996.5
[2025-04-19 17:22:45] 2025-04-19 15:22:23,446 | INFO     | mean y: 2312196.8161764704
[2025-04-19 17:22:45] 2025-04-19 15:22:23,446 | INFO     | -- intersect: 16161517141.026155
[2025-04-19 17:22:45] 2025-04-19 15:22:23,446 | INFO     | intersect: 16161517141.026155
[2025-04-19 17:22:45] 2025-04-19 15:22:23,446 | INFO     | chi2: 0.6844065580577943
[2025-04-19 17:22:45] 2025-04-19 15:22:23,446 | INFO     | current chi2=0.6844065580577943 (change=8.116599121772259 %)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,446 | INFO     | left removable region: 30
[2025-04-19 17:22:45] 2025-04-19 15:22:23,446 | INFO     | sum of square deviations: 471562330.0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,447 | INFO     | sum of deviations: 1250545994.0000002
[2025-04-19 17:22:45] 2025-04-19 15:22:23,447 | INFO     | mean x: 1745072271.0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,447 | INFO     | mean y: 2324494.434782609
[2025-04-19 17:22:45] 2025-04-19 15:22:23,447 | INFO     | -- intersect: -4625469116.092871
[2025-04-19 17:22:45] 2025-04-19 15:22:23,447 | INFO     | intersect: -4625469116.092871
[2025-04-19 17:22:45] 2025-04-19 15:22:23,448 | INFO     | chi2: 0.00011759359047889603
[2025-04-19 17:22:45] 2025-04-19 15:22:23,448 | INFO     | -- intersect: -4625469116.092871
[2025-04-19 17:22:45] 2025-04-19 15:22:23,448 | INFO     | current memory leak: 2.65 B/s (using 115 data points, chi2=0.00)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,448 | INFO     | sufficient remaining disk space (3306715873280 B)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,449 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,449 | INFO     | ..............................
[2025-04-19 17:22:45] 2025-04-19 15:22:23,450 | INFO     | . Timing measurements:
[2025-04-19 17:22:45] 2025-04-19 15:22:23,450 | INFO     | . get job = 0 s
[2025-04-19 17:22:45] 2025-04-19 15:22:23,450 | INFO     | . initial setup = 1 s
[2025-04-19 17:22:45] 2025-04-19 15:22:23,450 | INFO     | . payload setup = 8 s
[2025-04-19 17:22:45] 2025-04-19 15:22:23,450 | INFO     | . stage-in = 0 s
[2025-04-19 17:22:45] 2025-04-19 15:22:23,450 | INFO     | . payload execution = 9172 s
[2025-04-19 17:22:45] 2025-04-19 15:22:23,450 | INFO     | . stage-out = 0 s
[2025-04-19 17:22:45] 2025-04-19 15:22:23,450 | INFO     | . log creation = 0 s
[2025-04-19 17:22:45] 2025-04-19 15:22:23,450 | INFO     | ..............................
[2025-04-19 17:22:45] 2025-04-19 15:22:23,514 | INFO     | size of work directory /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6606785600: 2967599 B (within 2537553920 B limit)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,514 | INFO     | pfn file=/scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6606785600/HITS.44075483._073582.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,514 | INFO     | total size of present files: 0 B (workdir size: 2967599 B)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,514 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6606785600/HITS.44075483._073582.pool.root.1 since it does not exist
[2025-04-19 17:22:45] 2025-04-19 15:22:23,717 | INFO     | 
[2025-04-19 17:22:45] 2025-04-19 15:22:23,717 | INFO     | job summary report
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | --------------------------------------------------
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | PanDA job id: 6606785600
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | task id: 44075483
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | errors: (none)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | pilot state: finished 
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | transexitcode: 0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | exeerrorcode: 0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | exeerrordiag: 
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | exitcode: 0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,718 | INFO     | exitmsg: OK
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | cpuconsumptiontime: 33214 s
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | nevents: 400
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | neventsw: 0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | pid: 1360767
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | pgrp: 1360767
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | corecount: 4
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | event service: False
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | sizes: {0: 2426784, 6: 2426990, 11: 2427018, 9184: 2455406, 9185: 2464369, 9187: 2464425, 9194: 2464751}
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | --------------------------------------------------
[2025-04-19 17:22:45] 2025-04-19 15:22:23,719 | INFO     | 
[2025-04-19 17:22:45] 2025-04-19 15:22:23,720 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-04-19 17:22:45] 2025-04-19 15:22:23,754 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,754 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,754 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,756 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,756 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 17:22:45] 2025-04-19 15:22:23,756 | INFO     | job 6606785600 has completed (purged errors)
[2025-04-19 17:22:45] 2025-04-19 15:22:23,756 | INFO     | overall cleanup function is called
[2025-04-19 17:22:45] 2025-04-19 15:22:24,292 | INFO     | number of running child processes to parent process 1360767: 1
[2025-04-19 17:22:45] 2025-04-19 15:22:24,293 | INFO     | maximum number of monitored processes: 6
[2025-04-19 17:22:45] 2025-04-19 15:22:24,293 | INFO     | aborting job monitoring since job object (job id=6606785600) has expired
[2025-04-19 17:22:45] 2025-04-19 15:22:24,767 | INFO     | --- collectZombieJob: --- 10, [1360767]
[2025-04-19 17:22:45] 2025-04-19 15:22:24,767 | INFO     | zombie collector waiting for pid 1360767
[2025-04-19 17:22:45] 2025-04-19 15:22:24,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 17:22:45] 2025-04-19 15:22:24,767 | INFO     | collected zombie processes
[2025-04-19 17:22:45] 2025-04-19 15:22:24,767 | INFO     | will attempt to kill all subprocesses of pid=1360767
[2025-04-19 17:22:45] 2025-04-19 15:22:25,470 | INFO     | process IDs to be killed: [1360767] (in reverse order)
[2025-04-19 17:22:45] 2025-04-19 15:22:25,724 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 17:22:45] 2025-04-19 15:22:25,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 17:22:45] 2025-04-19 15:22:25,750 | INFO     | did not find any defunct processes belonging to 1360767
[2025-04-19 17:22:45] 2025-04-19 15:22:25,771 | INFO     | did not find any defunct processes belonging to 1360767
[2025-04-19 17:22:45] 2025-04-19 15:22:25,772 | INFO     | ready for new job
[2025-04-19 17:22:45] 2025-04-19 15:22:25,772 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 17:22:45] 2025-04-19 15:22:25,774 | INFO     | **************************************
[2025-04-19 17:22:45] 2025-04-19 15:22:25,774 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 17:22:45] 2025-04-19 15:22:25,774 | INFO     | **************************************
[2025-04-19 17:22:45] 2025-04-19 15:22:25,774 | INFO     | 
[2025-04-19 17:22:45] 2025-04-19 15:22:25,782 | INFO     | architecture information:
[2025-04-19 17:22:45] 2025-04-19 15:22:25,783 | INFO     | executing command: cat /etc/os-release
[2025-04-19 17:22:45] 2025-04-19 15:22:25,806 | INFO     | cat /etc/os-release:
[2025-04-19 17:22:45] NAME="CentOS Linux"
[2025-04-19 17:22:45] VERSION="7 (Core)"
[2025-04-19 17:22:45] ID="centos"
[2025-04-19 17:22:45] ID_LIKE="rhel fedora"
[2025-04-19 17:22:45] VERSION_ID="7"
[2025-04-19 17:22:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 17:22:45] ANSI_COLOR="0;31"
[2025-04-19 17:22:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 17:22:45] HOME_URL="https://www.centos.org/"
[2025-04-19 17:22:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 17:22:45] 
[2025-04-19 17:22:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 17:22:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 17:22:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 17:22:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 17:22:45] 
[2025-04-19 17:22:45] 2025-04-19 15:22:25,806 | INFO     | **************************************
[2025-04-19 17:22:45] 2025-04-19 15:22:26,309 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-04-19 17:22:45] 2025-04-19 15:22:26,337 | INFO     | sufficient remaining disk space (3306716921856 B)
[2025-04-19 17:22:45] 2025-04-19 15:22:26,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 17:22:45] 2025-04-19 15:22:26,337 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 17:22:45] 2025-04-19 15:22:26,338 | INFO     | update_server=False
[2025-04-19 17:22:45] 2025-04-19 15:22:26,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 17:22:45] 2025-04-19 15:22:26,796 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 17:22:45] 2025-04-19 15:22:26,796 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 17:22:45] 2025-04-19 15:22:26,797 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 17:22:45] 2025-04-19 15:22:26,797 | INFO     | will abort loop
[2025-04-19 17:22:45] 2025-04-19 15:22:26,837 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 17:22:45] 2025-04-19 15:22:26,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 17:22:45] 2025-04-19 15:22:26,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 17:22:45] 2025-04-19 15:22:26,859 | INFO     | all payload control threads have been joined
[2025-04-19 17:22:45] 2025-04-19 15:22:26,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 17:22:45] 2025-04-19 15:22:27,138 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 17:22:45] 2025-04-19 15:22:27,336 | INFO     | all data control threads have been joined
[2025-04-19 17:22:45] 2025-04-19 15:22:27,344 | INFO     | [job] retrieve thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:27,399 | INFO     | [payload] failed_post thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:27,575 | INFO     | all job control threads have been joined
[2025-04-19 17:22:45] 2025-04-19 15:22:27,580 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:27,802 | INFO     | [job] job monitor thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:27,864 | INFO     | [payload] control thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:27,915 | INFO     | [job] validate thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:28,095 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:28,225 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:28,341 | INFO     | [data] control thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:28,494 | INFO     | [data] copytool_in thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:28,566 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 17:22:45] 2025-04-19 15:22:28,580 | INFO     | [job] control thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:28,592 | INFO     | [payload] validate_post thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:29,144 | INFO     | [data] copytool_out thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:29,571 | INFO     | [job] queue monitor thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:30,876 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:36,707 | INFO     | job.realtimelogging is not enabled
[2025-04-19 17:22:45] 2025-04-19 15:22:37,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 17:22:45] 2025-04-19 15:22:39,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22954782721856)>', '<ExcThread(monitor, started 22954544957184)>']
[2025-04-19 17:22:45] 2025-04-19 15:22:39,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 17:22:45] 2025-04-19 15:22:39,902 | INFO     | [monitor] control thread has ended
[2025-04-19 17:22:45] 2025-04-19 15:22:44,701 | INFO     | all workflow threads have been joined
[2025-04-19 17:22:45] 2025-04-19 15:22:44,701 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 17:22:45] 2025-04-19 15:22:44,701 | INFO     | traces error code: 0
[2025-04-19 17:22:45] 2025-04-19 15:22:44,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 17:22:45] 2025-04-19 15:22:44,878 [wrapper] ==== pilot stdout END ====
[2025-04-19 17:22:45] 2025-04-19 15:22:44,883 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 17:22:45] 2025-04-19 15:22:44,886 [wrapper] pilotpid: 1353142
[2025-04-19 17:22:45] 2025-04-19 15:22:44,888 [wrapper] Pilot exit status: 0
[2025-04-19 17:22:45] 2025-04-19 15:22:44,903 [wrapper] pandaids: 6606785600
[2025-04-19 17:22:45] 2025-04-19 15:22:45,055 [wrapper] cleanup supervisor_pilot 2261032 1353144
[2025-04-19 17:22:45] 2025-04-19 15:22:45,059 [wrapper] Test setup, not cleaning
[2025-04-19 17:22:45] 2025-04-19 15:22:45,064 [wrapper] apfmon messages muted
[2025-04-19 17:22:45] 2025-04-19 15:22:45,068 [wrapper] ==== wrapper stdout END ====
[2025-04-19 17:22:45] 2025-04-19 15:22:45,071 [wrapper] ==== wrapper stderr END ====
[2025-04-19 17:22:45]  *** Error codes and diagnostics ***
[2025-04-19 17:22:45]     "exeErrorCode": 0,
[2025-04-19 17:22:45]     "exeErrorDiag": "",
[2025-04-19 17:22:45]     "pilotErrorCode": 0,
[2025-04-19 17:22:45]     "pilotErrorDiag": "",
[2025-04-19 17:22:45]  *** Listing of results directory ***
[2025-04-19 17:22:45] total 417588
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc    495897 Apr 18 21:39 pilot3.tar.gz
[2025-04-19 17:22:45] -rwx------ 1 boinc boinc     37140 Apr 18 21:51 runpilot2-wrapper.sh
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc      5111 Apr 18 21:51 queuedata.json
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc       100 Apr 19 14:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 17:22:45] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 14:48 run_atlas
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc       105 Apr 19 14:48 job.xml
[2025-04-19 17:22:45] -rw-r--r-- 2 boinc boinc 224573569 Apr 19 14:48 EVNT.44075481._002858.pool.root.1
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc      6675 Apr 19 14:48 init_data.xml
[2025-04-19 17:22:45] -rw-r--r-- 2 boinc boinc    508893 Apr 19 14:48 input.tar.gz
[2025-04-19 17:22:45] -rw-r--r-- 2 boinc boinc     17569 Apr 19 14:48 start_atlas.sh
[2025-04-19 17:22:45] drwxrwx--x 2 boinc boinc      4096 Apr 19 14:48 shared
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc         0 Apr 19 14:48 boinc_lockfile
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc      2578 Apr 19 14:48 pandaJob.out
[2025-04-19 17:22:45] -rw------- 1 boinc boinc       424 Apr 19 14:48 setup.sh.local
[2025-04-19 17:22:45] -rw------- 1 boinc boinc    991292 Apr 19 14:48 agis_schedconf.cvmfs.json
[2025-04-19 17:22:45] -rw------- 1 boinc boinc   1618536 Apr 19 14:48 agis_ddmendpoints.agis.ALL.json
[2025-04-19 17:22:45] drwx------ 4 boinc boinc      4096 Apr 19 14:48 pilot3
[2025-04-19 17:22:45] -rw------- 1 boinc boinc 196830406 Apr 19 17:21 HITS.44075483._073582.pool.root.1
[2025-04-19 17:22:45] -rw------- 1 boinc boinc        95 Apr 19 17:21 pilot_heartbeat.json
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc       529 Apr 19 17:21 boinc_task_state.xml
[2025-04-19 17:22:45] -rw------- 1 boinc boinc      1034 Apr 19 17:22 memory_monitor_summary.json
[2025-04-19 17:22:45] -rw------- 1 boinc boinc    297886 Apr 19 17:22 log.44075483._073582.job.log.tgz.1
[2025-04-19 17:22:45] -rw------- 1 boinc boinc      7717 Apr 19 17:22 heartbeat.json
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc      8192 Apr 19 17:22 boinc_mmap_file
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc        27 Apr 19 17:22 wrapper_checkpoint.txt
[2025-04-19 17:22:45] -rw------- 1 boinc boinc      4622 Apr 19 17:22 pilotlog.txt
[2025-04-19 17:22:45] -rw------- 1 boinc boinc    871403 Apr 19 17:22 log.44075483._073582.job.log.1
[2025-04-19 17:22:45] -rw------- 1 boinc boinc       357 Apr 19 17:22 output.list
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc       620 Apr 19 17:22 runtime_log
[2025-04-19 17:22:45] -rw------- 1 boinc boinc   1187840 Apr 19 17:22 result.tar.gz
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc     11423 Apr 19 17:22 runtime_log.err
[2025-04-19 17:22:45] -rw------- 1 boinc boinc       662 Apr 19 17:22 EPaMDmKv6P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdX5KDmLzcLNn.diag
[2025-04-19 17:22:45] -rw-r--r-- 1 boinc boinc     21022 Apr 19 17:22 stderr.txt
[2025-04-19 17:22:45] HITS file was successfully produced:
[2025-04-19 17:22:45] -rw------- 1 boinc boinc 196830406 Apr 19 17:21 shared/HITS.pool.root.1
[2025-04-19 17:22:45]  *** Contents of shared directory: ***
[2025-04-19 17:22:45] total 413220
[2025-04-19 17:22:45] -rw-r--r-- 2 boinc boinc 224573569 Apr 19 14:48 ATLAS.root_0
[2025-04-19 17:22:45] -rw-r--r-- 2 boinc boinc    508893 Apr 19 14:48 input.tar.gz
[2025-04-19 17:22:45] -rw-r--r-- 2 boinc boinc     17569 Apr 19 14:48 start_atlas.sh
[2025-04-19 17:22:45] -rw------- 1 boinc boinc 196830406 Apr 19 17:21 HITS.pool.root.1
[2025-04-19 17:22:45] -rw------- 1 boinc boinc   1187840 Apr 19 17:22 result.tar.gz
17:22:47 (1347151): run_atlas exited; CPU time 33703.048276
17:22:47 (1347151): called boinc_finish(0)

</stderr_txt>
]]>

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