Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:17:56 (223405): wrapper (7.7.26015): starting
22:17:56 (223405): wrapper: running run_atlas (--nthreads 10)
[2025-04-18 22:17:56] Arguments: --nthreads 10
[2025-04-18 22:17:56] Threads: 10
[2025-04-18 22:17:56] Checking for CVMFS
[2025-04-18 22:17:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 22:17:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 22:17:57] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 22:17:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 22:17:58] 2.12.6.0 3733875 105672 257428 145023 2 69 26582565 32935936 15606 130560 0 100245434 99.595 106416505 25168 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-18 22:17:58] CVMFS is ok
[2025-04-18 22:17:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 22:17:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 22:17:58] Further information can be found at the LHC@home message board.
[2025-04-18 22:17:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 22:17:58] Checking for apptainer binary...
[2025-04-18 22:17:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 22:17:58] Running /usr/bin/apptainer --version
[2025-04-18 22:17:59] apptainer version 1.4.0-1.el9
[2025-04-18 22:17:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 22:17:59] c-6-2.aglt2.org
[2025-04-18 22:17:59] apptainer works
[2025-04-18 22:17:59] Set ATHENA_PROC_NUMBER=10
[2025-04-18 22:17:59] Set ATHENA_CORE_NUMBER=10
[2025-04-18 22:17:59] Starting ATLAS job with PandaID=6606058759
[2025-04-18 22:17:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 05:49:21]  *** The last 200 lines of the pilot log: ***
[2025-04-19 05:49:21] 2025-04-19 09:49:00,798 | INFO     | sum of deviations: 140947247055.20618
[2025-04-19 05:49:21] 2025-04-19 09:49:00,799 | INFO     | mean x: 1745042642.2471654
[2025-04-19 05:49:21] 2025-04-19 09:49:00,799 | INFO     | mean y: 2172172.365079365
[2025-04-19 05:49:21] 2025-04-19 09:49:00,799 | INFO     | -- intersect: -9246718051.767096
[2025-04-19 05:49:21] 2025-04-19 09:49:00,799 | INFO     | intersect: -9246718051.767096
[2025-04-19 05:49:21] 2025-04-19 09:49:00,800 | INFO     | chi2: 6.113643516268789
[2025-04-19 05:49:21] 2025-04-19 09:49:00,801 | INFO     | sum of square deviations: 25699101238.229362
[2025-04-19 05:49:21] 2025-04-19 09:49:00,806 | INFO     | sum of deviations: 163137909774.35776
[2025-04-19 05:49:21] 2025-04-19 09:49:00,806 | INFO     | mean x: 1745042489.7568808
[2025-04-19 05:49:21] 2025-04-19 09:49:00,807 | INFO     | mean y: 2175917.880733945
[2025-04-19 05:49:21] 2025-04-19 09:49:00,807 | INFO     | -- intersect: -11075354833.385061
[2025-04-19 05:49:21] 2025-04-19 09:49:00,807 | INFO     | intersect: -11075354833.385061
[2025-04-19 05:49:21] 2025-04-19 09:49:00,808 | INFO     | chi2: 5.426057708186209
[2025-04-19 05:49:21] 2025-04-19 09:49:00,808 | INFO     | current chi2=5.426057708186209 (change=11.246743554034037 %)
[2025-04-19 05:49:21] 2025-04-19 09:49:00,808 | INFO     | right removable region: 435
[2025-04-19 05:49:21] 2025-04-19 09:49:00,809 | INFO     | sum of square deviations: 25698819295.19279
[2025-04-19 05:49:21] 2025-04-19 09:49:00,814 | INFO     | sum of deviations: 46777713792.32106
[2025-04-19 05:49:21] 2025-04-19 09:49:00,814 | INFO     | mean x: 1745042794.761468
[2025-04-19 05:49:21] 2025-04-19 09:49:00,814 | INFO     | mean y: 2188199.4357798165
[2025-04-19 05:49:21] 2025-04-19 09:49:00,814 | INFO     | -- intersect: -3174187783.8753877
[2025-04-19 05:49:21] 2025-04-19 09:49:00,814 | INFO     | intersect: -3174187783.8753877
[2025-04-19 05:49:21] 2025-04-19 09:49:00,815 | INFO     | chi2: 3.6864810654400584
[2025-04-19 05:49:21] 2025-04-19 09:49:00,815 | INFO     | current chi2=3.6864810654400584 (change=39.7007520044291 %)
[2025-04-19 05:49:21] 2025-04-19 09:49:00,816 | INFO     | sum of square deviations: 24824596751.693764
[2025-04-19 05:49:21] 2025-04-19 09:49:00,821 | INFO     | sum of deviations: -13733529102.888615
[2025-04-19 05:49:21] 2025-04-19 09:49:00,821 | INFO     | mean x: 1745042947.273782
[2025-04-19 05:49:21] 2025-04-19 09:49:00,821 | INFO     | mean y: 2198751.354988399
[2025-04-19 05:49:21] 2025-04-19 09:49:00,822 | INFO     | -- intersect: 967596028.1723794
[2025-04-19 05:49:21] 2025-04-19 09:49:00,822 | INFO     | intersect: 967596028.1723794
[2025-04-19 05:49:21] 2025-04-19 09:49:00,822 | INFO     | chi2: 2.7494175172351127
[2025-04-19 05:49:21] 2025-04-19 09:49:00,823 | INFO     | current chi2=2.7494175172351127 (change=25.418916619149584 %)
[2025-04-19 05:49:21] 2025-04-19 09:49:00,823 | INFO     | sum of square deviations: 23970421217.5609
[2025-04-19 05:49:21] 2025-04-19 09:49:00,828 | INFO     | sum of deviations: -69729226380.32158
[2025-04-19 05:49:21] 2025-04-19 09:49:00,828 | INFO     | mean x: 1745043099.786385
[2025-04-19 05:49:21] 2025-04-19 09:49:00,828 | INFO     | mean y: 2208749.8755868543
[2025-04-19 05:49:21] 2025-04-19 09:49:00,829 | INFO     | -- intersect: 5078486060.316795
[2025-04-19 05:49:21] 2025-04-19 09:49:00,829 | INFO     | intersect: 5078486060.316795
[2025-04-19 05:49:21] 2025-04-19 09:49:00,829 | INFO     | chi2: 1.9307011047444718
[2025-04-19 05:49:21] 2025-04-19 09:49:00,830 | INFO     | current chi2=1.9307011047444718 (change=29.777813204375153 %)
[2025-04-19 05:49:21] 2025-04-19 09:49:00,830 | INFO     | sum of square deviations: 23136189820.22328
[2025-04-19 05:49:21] 2025-04-19 09:49:00,835 | INFO     | sum of deviations: -103780135494.1948
[2025-04-19 05:49:21] 2025-04-19 09:49:00,835 | INFO     | mean x: 1745043252.287411
[2025-04-19 05:49:21] 2025-04-19 09:49:00,835 | INFO     | mean y: 2214968.4726840854
[2025-04-19 05:49:21] 2025-04-19 09:49:00,835 | INFO     | -- intersect: 7829814351.639833
[2025-04-19 05:49:21] 2025-04-19 09:49:00,836 | INFO     | intersect: 7829814351.639833
[2025-04-19 05:49:21] 2025-04-19 09:49:00,836 | INFO     | chi2: 1.5915708156375805
[2025-04-19 05:49:21] 2025-04-19 09:49:00,836 | INFO     | current chi2=1.5915708156375805 (change=17.565136740923716 %)
[2025-04-19 05:49:21] 2025-04-19 09:49:00,837 | INFO     | left removable region: 40
[2025-04-19 05:49:21] 2025-04-19 09:49:00,837 | INFO     | sum of square deviations: 19108825338.74945
[2025-04-19 05:49:21] 2025-04-19 09:49:00,841 | INFO     | sum of deviations: -18118331426.070896
[2025-04-19 05:49:21] 2025-04-19 09:49:00,842 | INFO     | mean x: 1745043679.2987342
[2025-04-19 05:49:21] 2025-04-19 09:49:00,842 | INFO     | mean y: 2208016.458227848
[2025-04-19 05:49:21] 2025-04-19 09:49:00,842 | INFO     | -- intersect: 1656798456.9491024
[2025-04-19 05:49:21] 2025-04-19 09:49:00,842 | INFO     | intersect: 1656798456.9491024
[2025-04-19 05:49:21] 2025-04-19 09:49:00,843 | INFO     | chi2: 0.6205835818094243
[2025-04-19 05:49:21] 2025-04-19 09:49:00,843 | INFO     | -- intersect: 1656798456.9491024
[2025-04-19 05:49:21] 2025-04-19 09:49:00,843 | INFO     | current memory leak: -0.95 B/s (using 395 data points, chi2=0.62)
[2025-04-19 05:49:21] 2025-04-19 09:49:00,844 | INFO     | ..............................
[2025-04-19 05:49:21] 2025-04-19 09:49:00,844 | INFO     | . Timing measurements:
[2025-04-19 05:49:21] 2025-04-19 09:49:00,844 | INFO     | . get job = 0 s
[2025-04-19 05:49:21] 2025-04-19 09:49:00,844 | INFO     | . initial setup = 6 s
[2025-04-19 05:49:21] 2025-04-19 09:49:00,845 | INFO     | . payload setup = 20 s
[2025-04-19 05:49:21] 2025-04-19 09:49:00,845 | INFO     | . stage-in = 0 s
[2025-04-19 05:49:21] 2025-04-19 09:49:00,845 | INFO     | . payload execution = 26902 s
[2025-04-19 05:49:21] 2025-04-19 09:49:00,845 | INFO     | . stage-out = 4 s
[2025-04-19 05:49:21] 2025-04-19 09:49:00,845 | INFO     | . log creation = 0 s
[2025-04-19 05:49:21] 2025-04-19 09:49:00,845 | INFO     | ..............................
[2025-04-19 05:49:21] 2025-04-19 09:49:01,060 | INFO     | 
[2025-04-19 05:49:21] 2025-04-19 09:49:01,061 | INFO     | job summary report
[2025-04-19 05:49:21] 2025-04-19 09:49:01,061 | INFO     | --------------------------------------------------
[2025-04-19 05:49:21] 2025-04-19 09:49:01,061 | INFO     | PanDA job id: 6606058759
[2025-04-19 05:49:21] 2025-04-19 09:49:01,061 | INFO     | task id: 44075483
[2025-04-19 05:49:21] 2025-04-19 09:49:01,061 | INFO     | errors: (none)
[2025-04-19 05:49:21] 2025-04-19 09:49:01,061 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 05:49:21] 2025-04-19 09:49:01,062 | INFO     | pilot state: finished 
[2025-04-19 05:49:21] 2025-04-19 09:49:01,062 | INFO     | transexitcode: 0
[2025-04-19 05:49:21] 2025-04-19 09:49:01,062 | INFO     | exeerrorcode: 0
[2025-04-19 05:49:21] 2025-04-19 09:49:01,062 | INFO     | exeerrordiag: 
[2025-04-19 05:49:21] 2025-04-19 09:49:01,062 | INFO     | exitcode: 0
[2025-04-19 05:49:21] 2025-04-19 09:49:01,062 | INFO     | exitmsg: OK
[2025-04-19 05:49:21] 2025-04-19 09:49:01,062 | INFO     | cpuconsumptiontime: 51031 s
[2025-04-19 05:49:21] 2025-04-19 09:49:01,062 | INFO     | nevents: 400
[2025-04-19 05:49:21] 2025-04-19 09:49:01,063 | INFO     | neventsw: 0
[2025-04-19 05:49:21] 2025-04-19 09:49:01,063 | INFO     | pid: 243383
[2025-04-19 05:49:21] 2025-04-19 09:49:01,063 | INFO     | pgrp: 243383
[2025-04-19 05:49:21] 2025-04-19 09:49:01,063 | INFO     | corecount: 10
[2025-04-19 05:49:21] 2025-04-19 09:49:01,063 | INFO     | event service: False
[2025-04-19 05:49:21] 2025-04-19 09:49:01,063 | INFO     | sizes: {0: 2426710, 1: 2426852, 12: 2426852, 17: 2427086, 23: 2427114, 26926: 2462777, 26931: 2471774, 26957: 2471888}
[2025-04-19 05:49:21] 2025-04-19 09:49:01,063 | INFO     | --------------------------------------------------
[2025-04-19 05:49:21] 2025-04-19 09:49:01,063 | INFO     | 
[2025-04-19 05:49:21] 2025-04-19 09:49:01,064 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 05:49:21] 2025-04-19 09:49:01,309 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,309 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 05:49:21] 2025-04-19 09:49:01,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,311 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 05:49:21] 2025-04-19 09:49:01,311 | INFO     | job 6606058759 has completed (purged errors)
[2025-04-19 05:49:21] 2025-04-19 09:49:01,311 | INFO     | overall cleanup function is called
[2025-04-19 05:49:21] 2025-04-19 09:49:02,357 | INFO     | --- collectZombieJob: --- 10, [243383]
[2025-04-19 05:49:21] 2025-04-19 09:49:02,358 | INFO     | zombie collector waiting for pid 243383
[2025-04-19 05:49:21] 2025-04-19 09:49:02,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 05:49:21] 2025-04-19 09:49:02,358 | INFO     | collected zombie processes
[2025-04-19 05:49:21] 2025-04-19 09:49:02,358 | INFO     | will attempt to kill all subprocesses of pid=243383
[2025-04-19 05:49:21] 2025-04-19 09:49:04,578 | INFO     | process IDs to be killed: [243383] (in reverse order)
[2025-04-19 05:49:21] 2025-04-19 09:49:04,856 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 05:49:21] 2025-04-19 09:49:04,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 05:49:21] 2025-04-19 09:49:04,917 | INFO     | did not find any defunct processes belonging to 243383
[2025-04-19 05:49:21] 2025-04-19 09:49:04,955 | INFO     | did not find any defunct processes belonging to 243383
[2025-04-19 05:49:21] 2025-04-19 09:49:04,955 | INFO     | ready for new job
[2025-04-19 05:49:21] 2025-04-19 09:49:04,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 05:49:21] 2025-04-19 09:49:04,965 | INFO     | **************************************
[2025-04-19 05:49:21] 2025-04-19 09:49:04,965 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 05:49:21] 2025-04-19 09:49:04,965 | INFO     | **************************************
[2025-04-19 05:49:21] 2025-04-19 09:49:04,965 | INFO     | 
[2025-04-19 05:49:21] 2025-04-19 09:49:04,983 | INFO     | architecture information:
[2025-04-19 05:49:21] 2025-04-19 09:49:04,987 | INFO     | executing command: cat /etc/os-release
[2025-04-19 05:49:21] 2025-04-19 09:49:05,092 | INFO     | cat /etc/os-release:
[2025-04-19 05:49:21] NAME="CentOS Linux"
[2025-04-19 05:49:21] VERSION="7 (Core)"
[2025-04-19 05:49:21] ID="centos"
[2025-04-19 05:49:21] ID_LIKE="rhel fedora"
[2025-04-19 05:49:21] VERSION_ID="7"
[2025-04-19 05:49:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 05:49:21] ANSI_COLOR="0;31"
[2025-04-19 05:49:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 05:49:21] HOME_URL="https://www.centos.org/"
[2025-04-19 05:49:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 05:49:21] 
[2025-04-19 05:49:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 05:49:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 05:49:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 05:49:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 05:49:21] 
[2025-04-19 05:49:21] 2025-04-19 09:49:05,092 | INFO     | **************************************
[2025-04-19 05:49:21] 2025-04-19 09:49:05,596 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 05:49:21] 2025-04-19 09:49:05,664 | INFO     | sufficient remaining disk space (76059508736 B)
[2025-04-19 05:49:21] 2025-04-19 09:49:05,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 05:49:21] 2025-04-19 09:49:05,665 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 05:49:21] 2025-04-19 09:49:05,665 | INFO     | update_server=False
[2025-04-19 05:49:21] 2025-04-19 09:49:05,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 05:49:21] 2025-04-19 09:49:05,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 05:49:21] 2025-04-19 09:49:05,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:49:21] 2025-04-19 09:49:05,667 | INFO     | aborting loop
[2025-04-19 05:49:21] 2025-04-19 09:49:05,667 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 05:49:21] 2025-04-19 09:49:05,667 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 05:49:21] 2025-04-19 09:49:05,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 05:49:21] 2025-04-19 09:49:05,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 05:49:21] 2025-04-19 09:49:06,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:49:21] 2025-04-19 09:49:06,191 | INFO     | all data control threads have been joined
[2025-04-19 05:49:21] 2025-04-19 09:49:06,671 | INFO     | [job] retrieve thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:06,677 | INFO     | [job] job monitor thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:06,806 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:06,813 | INFO     | all payload control threads have been joined
[2025-04-19 05:49:21] 2025-04-19 09:49:06,896 | INFO     | [data] copytool_in thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,006 | INFO     | all job control threads have been joined
[2025-04-19 05:49:21] 2025-04-19 09:49:07,087 | INFO     | [job] queue monitor thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,198 | INFO     | [data] control thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,355 | INFO     | [payload] validate_post thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,402 | INFO     | [job] validate thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,474 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,684 | INFO     | [data] copytool_out thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,702 | INFO     | [payload] failed_post thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,820 | INFO     | [payload] control thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:07,946 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:08,019 | INFO     | [job] control thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:08,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 05:49:21] 2025-04-19 09:49:12,330 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 05:49:21] 2025-04-19 09:49:13,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720884512576)>', '<ExcThread(monitor, started 139720243799808)>']
[2025-04-19 05:49:21] 2025-04-19 09:49:13,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 05:49:21] 2025-04-19 09:49:13,726 | INFO     | [monitor] control thread has ended
[2025-04-19 05:49:21] 2025-04-19 09:49:18,504 | INFO     | all workflow threads have been joined
[2025-04-19 05:49:21] 2025-04-19 09:49:18,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 05:49:21] 2025-04-19 09:49:18,505 | INFO     | traces error code: 0
[2025-04-19 05:49:21] 2025-04-19 09:49:18,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 05:49:21] 2025-04-19 09:49:19,191 [wrapper] ==== pilot stdout END ====
[2025-04-19 05:49:21] 2025-04-19 09:49:19,231 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 05:49:21] 2025-04-19 09:49:19,251 [wrapper] pilotpid: 232529
[2025-04-19 05:49:21] 2025-04-19 09:49:19,276 [wrapper] Pilot exit status: 0
[2025-04-19 05:49:21] 2025-04-19 09:49:19,483 [wrapper] pandaids: 6606058759
[2025-04-19 05:49:21] 2025-04-19 09:49:20,269 [wrapper] cleanup supervisor_pilot 2549446 232530
[2025-04-19 05:49:21] 2025-04-19 09:49:20,321 [wrapper] Test setup, not cleaning
[2025-04-19 05:49:21] 2025-04-19 09:49:20,367 [wrapper] apfmon messages muted
[2025-04-19 05:49:21] 2025-04-19 09:49:20,389 [wrapper] ==== wrapper stdout END ====
[2025-04-19 05:49:21] 2025-04-19 09:49:20,411 [wrapper] ==== wrapper stderr END ====
[2025-04-19 05:49:21]  *** Error codes and diagnostics ***
[2025-04-19 05:49:21]     "exeErrorCode": 0,
[2025-04-19 05:49:21]     "exeErrorDiag": "",
[2025-04-19 05:49:21]     "pilotErrorCode": 0,
[2025-04-19 05:49:21]     "pilotErrorDiag": "",
[2025-04-19 05:49:21]  *** Listing of results directory ***
[2025-04-19 05:49:21] total 416500
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas    495897 Apr 17 23:29 pilot3.tar.gz
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas      5111 Apr 17 23:37 queuedata.json
[2025-04-19 05:49:21] -rwx------. 1 boincer umatlas     37140 Apr 17 23:38 runpilot2-wrapper.sh
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas       100 Apr 18 22:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 05:49:21] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 22:17 run_atlas
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas       105 Apr 18 22:17 job.xml
[2025-04-19 05:49:21] -rw-r--r--. 2 boincer umatlas 222679619 Apr 18 22:17 EVNT.44075481._002481.pool.root.1
[2025-04-19 05:49:21] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 22:17 start_atlas.sh
[2025-04-19 05:49:21] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 22:17 shared
[2025-04-19 05:49:21] -rw-r--r--. 2 boincer umatlas    508891 Apr 18 22:17 input.tar.gz
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas         0 Apr 18 22:17 boinc_lockfile
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas      2579 Apr 18 22:17 pandaJob.out
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas       467 Apr 18 22:18 setup.sh.local
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas    991292 Apr 18 22:18 agis_schedconf.cvmfs.json
[2025-04-19 05:49:21] drwx------. 4 boincer umatlas      4096 Apr 18 22:18 pilot3
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas 195133621 Apr 19 05:47 HITS.44075483._063809.pool.root.1
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas       531 Apr 19 05:47 boinc_task_state.xml
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas        95 Apr 19 05:48 pilot_heartbeat.json
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas      1054 Apr 19 05:48 memory_monitor_summary.json
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas   1618536 Apr 19 05:48 agis_ddmendpoints.agis.ALL.json
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas    511282 Apr 19 05:48 log.44075483._063809.job.log.tgz.1
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas      6657 Apr 19 05:48 init_data.xml
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 05:48 boinc_mmap_file
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas        28 Apr 19 05:48 wrapper_checkpoint.txt
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas      7719 Apr 19 05:49 heartbeat.json
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas      4476 Apr 19 05:49 pilotlog.txt
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas   1894526 Apr 19 05:49 log.44075483._063809.job.log.1
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas       357 Apr 19 05:49 output.list
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas       620 Apr 19 05:49 runtime_log
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas   2426880 Apr 19 05:49 result.tar.gz
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas       656 Apr 19 05:49 yXFKDmpjrP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmhKeLDmNcEINn.diag
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas     11406 Apr 19 05:49 runtime_log.err
[2025-04-19 05:49:21] -rw-r--r--. 1 boincer umatlas     20837 Apr 19 05:49 stderr.txt
[2025-04-19 05:49:21] HITS file was successfully produced:
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas 195133621 Apr 19 05:47 shared/HITS.pool.root.1
[2025-04-19 05:49:21]  *** Contents of shared directory: ***
[2025-04-19 05:49:21] total 410924
[2025-04-19 05:49:21] -rw-r--r--. 2 boincer umatlas 222679619 Apr 18 22:17 ATLAS.root_0
[2025-04-19 05:49:21] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 22:17 start_atlas.sh
[2025-04-19 05:49:21] -rw-r--r--. 2 boincer umatlas    508891 Apr 18 22:17 input.tar.gz
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas 195133621 Apr 19 05:47 HITS.pool.root.1
[2025-04-19 05:49:21] -rw-------. 1 boincer umatlas   2426880 Apr 19 05:49 result.tar.gz
05:49:22 (223405): run_atlas exited; CPU time 52039.810384
05:49:22 (223405): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN