Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:27:04 (3303628): wrapper (7.7.26015): starting
21:27:04 (3303628): wrapper: running run_atlas (--nthreads 4)
[2025-04-18 21:27:04] Arguments: --nthreads 4
[2025-04-18 21:27:04] Threads: 4
[2025-04-18 21:27:04] Checking for CVMFS
[2025-04-18 21:27:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 21:27:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 21:27:04] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 21:27:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 21:27:04] 2.12.7.0 61385 10515 69996 145026 3 235 5259443 6144001 17365 130560 7 88392528 99.989 2913711 399 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-18 21:27:04] CVMFS is ok
[2025-04-18 21:27:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 21:27:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-18 21:27:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-18 21:27:04] Further information can be found at the LHC@home message board.
[2025-04-18 21:27:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 21:27:04] Checking for apptainer binary...
[2025-04-18 21:27:04] apptainer is not installed, using version from CVMFS
[2025-04-18 21:27:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 21:27:05] mz32
[2025-04-18 21:27:05] apptainer works
[2025-04-18 21:27:05] Set ATHENA_PROC_NUMBER=4
[2025-04-18 21:27:05] Set ATHENA_CORE_NUMBER=4
[2025-04-18 21:27:05] Starting ATLAS job with PandaID=6605003512
[2025-04-18 21:27:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 01:02:17]  *** The last 200 lines of the pilot log: ***
[2025-04-19 01:02:17] 2025-04-19 08:02:04,165 | INFO     | mean x: 1745043284.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,165 | INFO     | mean y: 2237628.990521327
[2025-04-19 01:02:17] 2025-04-19 08:02:04,165 | INFO     | -- intersect: -57137493537.4376
[2025-04-19 01:02:17] 2025-04-19 08:02:04,165 | INFO     | intersect: -57137493537.4376
[2025-04-19 01:02:17] 2025-04-19 08:02:04,166 | INFO     | chi2: 5.681399422680542
[2025-04-19 01:02:17] 2025-04-19 08:02:04,166 | INFO     | sum of square deviations: 2710627567.5
[2025-04-19 01:02:17] 2025-04-19 08:02:04,167 | INFO     | sum of deviations: 106115144787.5
[2025-04-19 01:02:17] 2025-04-19 08:02:04,167 | INFO     | mean x: 1745043131.5
[2025-04-19 01:02:17] 2025-04-19 08:02:04,167 | INFO     | mean y: 2245533.839805825
[2025-04-19 01:02:17] 2025-04-19 08:02:04,167 | INFO     | -- intersect: -68312379012.80769
[2025-04-19 01:02:17] 2025-04-19 08:02:04,167 | INFO     | intersect: -68312379012.80769
[2025-04-19 01:02:17] 2025-04-19 08:02:04,167 | INFO     | chi2: 4.89175067929525
[2025-04-19 01:02:17] 2025-04-19 08:02:04,167 | INFO     | current chi2=4.89175067929525 (change=13.898842250607462 %)
[2025-04-19 01:02:17] 2025-04-19 08:02:04,168 | INFO     | right removable region: 205
[2025-04-19 01:02:17] 2025-04-19 08:02:04,168 | INFO     | sum of square deviations: 2710627567.5
[2025-04-19 01:02:17] 2025-04-19 08:02:04,169 | INFO     | sum of deviations: 45922409424.00001
[2025-04-19 01:02:17] 2025-04-19 08:02:04,169 | INFO     | mean x: 1745043436.5
[2025-04-19 01:02:17] 2025-04-19 08:02:04,169 | INFO     | mean y: 2274823.2718446604
[2025-04-19 01:02:17] 2025-04-19 08:02:04,169 | INFO     | -- intersect: -29561579729.98447
[2025-04-19 01:02:17] 2025-04-19 08:02:04,169 | INFO     | intersect: -29561579729.98447
[2025-04-19 01:02:17] 2025-04-19 08:02:04,169 | INFO     | chi2: 3.007163006724537
[2025-04-19 01:02:17] 2025-04-19 08:02:04,169 | INFO     | current chi2=3.007163006724537 (change=47.07003005774012 %)
[2025-04-19 01:02:17] 2025-04-19 08:02:04,170 | INFO     | sum of square deviations: 2518000700.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,170 | INFO     | sum of deviations: 10508480919.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,171 | INFO     | mean x: 1745043589.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,171 | INFO     | mean y: 2302866.3631840795
[2025-04-19 01:02:17] 2025-04-19 08:02:04,171 | INFO     | -- intersect: -7280362804.790037
[2025-04-19 01:02:17] 2025-04-19 08:02:04,171 | INFO     | intersect: -7280362804.790037
[2025-04-19 01:02:17] 2025-04-19 08:02:04,171 | INFO     | chi2: 1.7454912307267407
[2025-04-19 01:02:17] 2025-04-19 08:02:04,171 | INFO     | current chi2=1.7454912307267407 (change=41.95554990456054 %)
[2025-04-19 01:02:17] 2025-04-19 08:02:04,171 | INFO     | sum of square deviations: 2334722845.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,172 | INFO     | sum of deviations: -16676216569.5
[2025-04-19 01:02:17] 2025-04-19 08:02:04,172 | INFO     | mean x: 1745043741.5
[2025-04-19 01:02:17] 2025-04-19 08:02:04,172 | INFO     | mean y: 2325366.6173469387
[2025-04-19 01:02:17] 2025-04-19 08:02:04,172 | INFO     | -- intersect: 12466643098.731104
[2025-04-19 01:02:17] 2025-04-19 08:02:04,172 | INFO     | intersect: 12466643098.731104
[2025-04-19 01:02:17] 2025-04-19 08:02:04,173 | INFO     | chi2: 0.8481160750394733
[2025-04-19 01:02:17] 2025-04-19 08:02:04,173 | INFO     | current chi2=0.8481160750394733 (change=51.411037757757306 %)
[2025-04-19 01:02:17] 2025-04-19 08:02:04,173 | INFO     | sum of square deviations: 2160561440.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,174 | INFO     | sum of deviations: -17152331787.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,174 | INFO     | mean x: 1745043894.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,174 | INFO     | mean y: 2325759.3141361256
[2025-04-19 01:02:17] 2025-04-19 08:02:04,174 | INFO     | -- intersect: 13855934038.45035
[2025-04-19 01:02:17] 2025-04-19 08:02:04,174 | INFO     | intersect: 13855934038.45035
[2025-04-19 01:02:17] 2025-04-19 08:02:04,174 | INFO     | chi2: 0.8427111735858261
[2025-04-19 01:02:17] 2025-04-19 08:02:04,174 | INFO     | current chi2=0.8427111735858261 (change=0.6372832225112088 %)
[2025-04-19 01:02:17] 2025-04-19 08:02:04,174 | INFO     | left removable region: 40
[2025-04-19 01:02:17] 2025-04-19 08:02:04,175 | INFO     | sum of square deviations: 1392881930.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,175 | INFO     | sum of deviations: 702265428.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,175 | INFO     | mean x: 1745044321.0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,175 | INFO     | mean y: 2330974.7696969695
[2025-04-19 01:02:17] 2025-04-19 08:02:04,175 | INFO     | -- intersect: -877488247.930704
[2025-04-19 01:02:17] 2025-04-19 08:02:04,176 | INFO     | intersect: -877488247.930704
[2025-04-19 01:02:17] 2025-04-19 08:02:04,176 | INFO     | chi2: 0.003544826518525401
[2025-04-19 01:02:17] 2025-04-19 08:02:04,176 | INFO     | -- intersect: -877488247.930704
[2025-04-19 01:02:17] 2025-04-19 08:02:04,176 | INFO     | current memory leak: 0.50 B/s (using 165 data points, chi2=0.00)
[2025-04-19 01:02:17] 2025-04-19 08:02:04,176 | INFO     | ..............................
[2025-04-19 01:02:17] 2025-04-19 08:02:04,176 | INFO     | . Timing measurements:
[2025-04-19 01:02:17] 2025-04-19 08:02:04,176 | INFO     | . get job = 0 s
[2025-04-19 01:02:17] 2025-04-19 08:02:04,176 | INFO     | . initial setup = 4 s
[2025-04-19 01:02:17] 2025-04-19 08:02:04,177 | INFO     | . payload setup = 9 s
[2025-04-19 01:02:17] 2025-04-19 08:02:04,177 | INFO     | . stage-in = 0 s
[2025-04-19 01:02:17] 2025-04-19 08:02:04,177 | INFO     | . payload execution = 12822 s
[2025-04-19 01:02:17] 2025-04-19 08:02:04,177 | INFO     | . stage-out = 17 s
[2025-04-19 01:02:17] 2025-04-19 08:02:04,177 | INFO     | . log creation = 0 s
[2025-04-19 01:02:17] 2025-04-19 08:02:04,177 | INFO     | ..............................
[2025-04-19 01:02:17] 2025-04-19 08:02:04,243 | INFO     | 
[2025-04-19 01:02:17] 2025-04-19 08:02:04,244 | INFO     | job summary report
[2025-04-19 01:02:17] 2025-04-19 08:02:04,244 | INFO     | --------------------------------------------------
[2025-04-19 01:02:17] 2025-04-19 08:02:04,244 | INFO     | PanDA job id: 6605003512
[2025-04-19 01:02:17] 2025-04-19 08:02:04,244 | INFO     | task id: 44075483
[2025-04-19 01:02:17] 2025-04-19 08:02:04,244 | INFO     | errors: (none)
[2025-04-19 01:02:17] 2025-04-19 08:02:04,244 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 01:02:17] 2025-04-19 08:02:04,244 | INFO     | pilot state: finished 
[2025-04-19 01:02:17] 2025-04-19 08:02:04,244 | INFO     | transexitcode: 0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | exeerrorcode: 0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | exeerrordiag: 
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | exitcode: 0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | exitmsg: OK
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | cpuconsumptiontime: 46731 s
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | nevents: 400
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | neventsw: 0
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | pid: 3315139
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | pgrp: 3315139
[2025-04-19 01:02:17] 2025-04-19 08:02:04,245 | INFO     | corecount: 4
[2025-04-19 01:02:17] 2025-04-19 08:02:04,246 | INFO     | event service: False
[2025-04-19 01:02:17] 2025-04-19 08:02:04,246 | INFO     | sizes: {0: 2426603, 1: 2426858, 2: 2426858, 8: 2427092, 12: 2427120, 12835: 2457483, 12836: 2457610, 12854: 2466621, 12856: 2466677, 12863: 2466847}
[2025-04-19 01:02:17] 2025-04-19 08:02:04,246 | INFO     | --------------------------------------------------
[2025-04-19 01:02:17] 2025-04-19 08:02:04,246 | INFO     | 
[2025-04-19 01:02:17] 2025-04-19 08:02:04,246 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-04-19 01:02:17] 2025-04-19 08:02:04,286 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,286 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,286 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,286 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,288 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 01:02:17] 2025-04-19 08:02:04,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,288 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 01:02:17] 2025-04-19 08:02:04,288 | INFO     | job 6605003512 has completed (purged errors)
[2025-04-19 01:02:17] 2025-04-19 08:02:04,288 | INFO     | overall cleanup function is called
[2025-04-19 01:02:17] 2025-04-19 08:02:05,297 | INFO     | --- collectZombieJob: --- 10, [3315139]
[2025-04-19 01:02:17] 2025-04-19 08:02:05,297 | INFO     | zombie collector waiting for pid 3315139
[2025-04-19 01:02:17] 2025-04-19 08:02:05,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 01:02:17] 2025-04-19 08:02:05,298 | INFO     | collected zombie processes
[2025-04-19 01:02:17] 2025-04-19 08:02:05,298 | INFO     | will attempt to kill all subprocesses of pid=3315139
[2025-04-19 01:02:17] 2025-04-19 08:02:05,904 | INFO     | process IDs to be killed: [3315139] (in reverse order)
[2025-04-19 01:02:17] 2025-04-19 08:02:06,161 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 01:02:17] 2025-04-19 08:02:06,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 01:02:17] 2025-04-19 08:02:06,179 | INFO     | did not find any defunct processes belonging to 3315139
[2025-04-19 01:02:17] 2025-04-19 08:02:06,195 | INFO     | did not find any defunct processes belonging to 3315139
[2025-04-19 01:02:17] 2025-04-19 08:02:06,196 | INFO     | ready for new job
[2025-04-19 01:02:17] 2025-04-19 08:02:06,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 01:02:17] 2025-04-19 08:02:06,198 | INFO     | **************************************
[2025-04-19 01:02:17] 2025-04-19 08:02:06,198 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 01:02:17] 2025-04-19 08:02:06,199 | INFO     | **************************************
[2025-04-19 01:02:17] 2025-04-19 08:02:06,199 | INFO     | 
[2025-04-19 01:02:17] 2025-04-19 08:02:06,208 | INFO     | architecture information:
[2025-04-19 01:02:17] 2025-04-19 08:02:06,209 | INFO     | executing command: cat /etc/os-release
[2025-04-19 01:02:17] 2025-04-19 08:02:06,239 | INFO     | cat /etc/os-release:
[2025-04-19 01:02:17] NAME="CentOS Linux"
[2025-04-19 01:02:17] VERSION="7 (Core)"
[2025-04-19 01:02:17] ID="centos"
[2025-04-19 01:02:17] ID_LIKE="rhel fedora"
[2025-04-19 01:02:17] VERSION_ID="7"
[2025-04-19 01:02:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 01:02:17] ANSI_COLOR="0;31"
[2025-04-19 01:02:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 01:02:17] HOME_URL="https://www.centos.org/"
[2025-04-19 01:02:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 01:02:17] 
[2025-04-19 01:02:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 01:02:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 01:02:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 01:02:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 01:02:17] 
[2025-04-19 01:02:17] 2025-04-19 08:02:06,239 | INFO     | **************************************
[2025-04-19 01:02:17] 2025-04-19 08:02:06,741 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-04-19 01:02:17] 2025-04-19 08:02:06,768 | INFO     | sufficient remaining disk space (255544262656 B)
[2025-04-19 01:02:17] 2025-04-19 08:02:06,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 01:02:17] 2025-04-19 08:02:06,769 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 01:02:17] 2025-04-19 08:02:06,769 | INFO     | update_server=False
[2025-04-19 01:02:17] 2025-04-19 08:02:06,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 01:02:17] 2025-04-19 08:02:06,835 | INFO     | all job control threads have been joined
[2025-04-19 01:02:17] 2025-04-19 08:02:07,243 | INFO     | all payload control threads have been joined
[2025-04-19 01:02:17] 2025-04-19 08:02:07,335 | INFO     | all data control threads have been joined
[2025-04-19 01:02:17] 2025-04-19 08:02:07,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 01:02:17] 2025-04-19 08:02:07,470 | INFO     | aborting loop
[2025-04-19 01:02:17] 2025-04-19 08:02:07,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 01:02:17] 2025-04-19 08:02:07,775 | INFO     | [job] retrieve thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:07,841 | INFO     | [job] control thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:07,867 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:08,017 | INFO     | [payload] failed_post thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:08,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 01:02:17] 2025-04-19 08:02:08,225 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:08,250 | INFO     | [payload] control thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:08,340 | INFO     | [data] control thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:08,365 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:08,368 | INFO     | [data] copytool_in thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:08,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:08,464 | INFO     | PID=3307785 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-19 01:02:17] 2025-04-19 08:02:08,464 | INFO     | .. there are 20 such processes running
[2025-04-19 01:02:17] 2025-04-19 08:02:08,464 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 01:02:17] 2025-04-19 08:02:08,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 01:02:17] 2025-04-19 08:02:08,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 01:02:17] 2025-04-19 08:02:08,475 | INFO     | [job] job monitor thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:08,771 | INFO     | [payload] validate_post thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:09,213 | INFO     | [job] validate thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:09,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 01:02:17] 2025-04-19 08:02:10,137 | INFO     | [data] copytool_out thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:10,259 | INFO     | [job] queue monitor thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:11,680 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 01:02:17] 2025-04-19 08:02:12,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124246435649344)>', '<ExcThread(monitor, started 124245931722496)>']
[2025-04-19 01:02:17] 2025-04-19 08:02:12,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 01:02:17] 2025-04-19 08:02:12,486 | INFO     | [monitor] control thread has ended
[2025-04-19 01:02:17] 2025-04-19 08:02:17,490 | INFO     | all workflow threads have been joined
[2025-04-19 01:02:17] 2025-04-19 08:02:17,490 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 01:02:17] 2025-04-19 08:02:17,490 | INFO     | traces error code: 0
[2025-04-19 01:02:17] 2025-04-19 08:02:17,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 01:02:17] 2025-04-19 08:02:17,642 [wrapper] ==== pilot stdout END ====
[2025-04-19 01:02:17] 2025-04-19 08:02:17,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 01:02:17] 2025-04-19 08:02:17,652 [wrapper] pilotpid: 3307785
[2025-04-19 01:02:17] 2025-04-19 08:02:17,657 [wrapper] Pilot exit status: 0
[2025-04-19 01:02:17] 2025-04-19 08:02:17,669 [wrapper] pandaids: 6605003512
[2025-04-19 01:02:17] 2025-04-19 08:02:17,795 [wrapper] cleanup supervisor_pilot 4092691 3307786
[2025-04-19 01:02:17] 2025-04-19 08:02:17,800 [wrapper] Test setup, not cleaning
[2025-04-19 01:02:17] 2025-04-19 08:02:17,804 [wrapper] apfmon messages muted
[2025-04-19 01:02:17] 2025-04-19 08:02:17,808 [wrapper] ==== wrapper stdout END ====
[2025-04-19 01:02:17] 2025-04-19 08:02:17,812 [wrapper] ==== wrapper stderr END ====
[2025-04-19 01:02:17]  *** Error codes and diagnostics ***
[2025-04-19 01:02:17]     "exeErrorCode": 0,
[2025-04-19 01:02:17]     "exeErrorDiag": "",
[2025-04-19 01:02:17]     "pilotErrorCode": 0,
[2025-04-19 01:02:17]     "pilotErrorDiag": "",
[2025-04-19 01:02:17]  *** Listing of results directory ***
[2025-04-19 01:02:17] total 413700
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc    495897 Apr 16 22:35 pilot3.tar.gz
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc      5111 Apr 16 22:44 queuedata.json
[2025-04-19 01:02:17] -rwx------ 1 boinc boinc     37140 Apr 16 22:45 runpilot2-wrapper.sh
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc       100 Apr 18 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 01:02:17] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 21:27 run_atlas
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc       105 Apr 18 21:27 job.xml
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc     10261 Apr 18 21:27 init_data.xml
[2025-04-19 01:02:17] -rw-r--r-- 2 boinc boinc 226885974 Apr 18 21:27 EVNT.44075481._001998.pool.root.1
[2025-04-19 01:02:17] -rw-r--r-- 2 boinc boinc     17569 Apr 18 21:27 start_atlas.sh
[2025-04-19 01:02:17] drwxrwx--x 2 boinc boinc      4096 Apr 18 21:27 shared
[2025-04-19 01:02:17] -rw-r--r-- 2 boinc boinc    508883 Apr 18 21:27 input.tar.gz
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc         0 Apr 18 21:27 boinc_lockfile
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc      2578 Apr 18 21:27 pandaJob.out
[2025-04-19 01:02:17] -rw------- 1 boinc boinc       424 Apr 18 21:27 setup.sh.local
[2025-04-19 01:02:17] -rw------- 1 boinc boinc    991292 Apr 18 21:27 agis_schedconf.cvmfs.json
[2025-04-19 01:02:17] drwx------ 4 boinc boinc      4096 Apr 18 21:27 pilot3
[2025-04-19 01:02:17] -rw------- 1 boinc boinc 189832199 Apr 19 01:00 HITS.44075483._051211.pool.root.1
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc       531 Apr 19 01:01 boinc_task_state.xml
[2025-04-19 01:02:17] -rw------- 1 boinc boinc        95 Apr 19 01:01 pilot_heartbeat.json
[2025-04-19 01:02:17] -rw------- 1 boinc boinc      1025 Apr 19 01:01 memory_monitor_summary.json
[2025-04-19 01:02:17] -rw------- 1 boinc boinc   1618536 Apr 19 01:01 agis_ddmendpoints.agis.ALL.json
[2025-04-19 01:02:17] -rw------- 1 boinc boinc    329019 Apr 19 01:01 log.44075483._051211.job.log.tgz.1
[2025-04-19 01:02:17] -rw------- 1 boinc boinc      7635 Apr 19 01:02 heartbeat.json
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc        28 Apr 19 01:02 wrapper_checkpoint.txt
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc      8192 Apr 19 01:02 boinc_mmap_file
[2025-04-19 01:02:17] -rw------- 1 boinc boinc      4757 Apr 19 01:02 pilotlog.txt
[2025-04-19 01:02:17] -rw------- 1 boinc boinc   1190520 Apr 19 01:02 log.44075483._051211.job.log.1
[2025-04-19 01:02:17] -rw------- 1 boinc boinc       357 Apr 19 01:02 output.list
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc       620 Apr 19 01:02 runtime_log
[2025-04-19 01:02:17] -rw------- 1 boinc boinc   1536000 Apr 19 01:02 result.tar.gz
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc     11124 Apr 19 01:02 runtime_log.err
[2025-04-19 01:02:17] -rw------- 1 boinc boinc       655 Apr 19 01:02 cKYKDmFFXP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm0AcLDmLo4tRn.diag
[2025-04-19 01:02:17] -rw-r--r-- 1 boinc boinc     20949 Apr 19 01:02 stderr.txt
[2025-04-19 01:02:17] HITS file was successfully produced:
[2025-04-19 01:02:17] -rw------- 1 boinc boinc 189832199 Apr 19 01:00 shared/HITS.pool.root.1
[2025-04-19 01:02:17]  *** Contents of shared directory: ***
[2025-04-19 01:02:17] total 408984
[2025-04-19 01:02:17] -rw-r--r-- 2 boinc boinc 226885974 Apr 18 21:27 ATLAS.root_0
[2025-04-19 01:02:17] -rw-r--r-- 2 boinc boinc     17569 Apr 18 21:27 start_atlas.sh
[2025-04-19 01:02:17] -rw-r--r-- 2 boinc boinc    508883 Apr 18 21:27 input.tar.gz
[2025-04-19 01:02:17] -rw------- 1 boinc boinc 189832199 Apr 19 01:00 HITS.pool.root.1
[2025-04-19 01:02:17] -rw------- 1 boinc boinc   1536000 Apr 19 01:02 result.tar.gz
01:02:19 (3303628): run_atlas exited; CPU time 47598.900277
01:02:19 (3303628): called boinc_finish(0)

</stderr_txt>
]]>

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