Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:04:45 (24514): wrapper (7.7.26015): starting
22:04:45 (24514): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 22:04:45] Arguments: --nthreads 12
[2025-04-18 22:04:45] Threads: 12
[2025-04-18 22:04:45] Checking for CVMFS
[2025-04-18 22:04:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 22:04:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 22:04:46] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 22:04:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 22:04:46] 2.11.2.0 20204 374574 165516 145022 3 55 19802776 20275201 1 130560 0 23022873 99.969 7468414 50464 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 22:04:46] CVMFS is ok
[2025-04-18 22:04:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 22:04:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 22:04:46] Further information can be found at the LHC@home message board.
[2025-04-18 22:04:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 22:04:46] Checking for apptainer binary...
[2025-04-18 22:04:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 22:04:46] Running /usr/bin/apptainer --version
[2025-04-18 22:04:46] apptainer version 1.3.2-1.el7
[2025-04-18 22:04:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 22:04:47] c-205-28.aglt2.org
[2025-04-18 22:04:47] apptainer works
[2025-04-18 22:04:47] Set ATHENA_PROC_NUMBER=12
[2025-04-18 22:04:47] Set ATHENA_CORE_NUMBER=12
[2025-04-18 22:04:47] Starting ATLAS job with PandaID=6606995356
[2025-04-18 22:04:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 23:29:12]  *** The last 200 lines of the pilot log: ***
[2025-04-18 23:29:12]  is_tar=False
[2025-04-18 23:29:12]  lfn=log.44075483._074772.job.log.tgz.1
[2025-04-18 23:29:12]  mtime=0
[2025-04-18 23:29:12]  protocol_id=None
[2025-04-18 23:29:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 23:29:12]  replicas=None
[2025-04-18 23:29:12]  scope=mc23_13p6TeV
[2025-04-18 23:29:12]  status=None
[2025-04-18 23:29:12]  status_code=0
[2025-04-18 23:29:12]  storage_token=
[2025-04-18 23:29:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606995356/log.44075483._074772.job.log.tgz.1
[2025-04-18 23:29:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/e6/log.44075483._074772.job.log.tgz.1
[2025-04-18 23:29:12]  workdir=None
[2025-04-18 23:29:12] ]
[2025-04-18 23:29:12] 2025-04-19 03:28:51,466 | INFO     | transferring file log.44075483._074772.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606995356/log.44075483._074772.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 23:29:12] 2025-04-19 03:28:51,466 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606995356/log.44075483._074772.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._074772.job
[2025-04-18 23:29:12] 2025-04-19 03:28:51,487 | INFO     | adding to output.list: log.44075483._074772.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/e6/log.44075483._074772.job.log.tg
[2025-04-18 23:29:12] 2025-04-19 03:28:51,488 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 23:29:12] 2025-04-19 03:28:51,488 | INFO     | summary of transferred files:
[2025-04-18 23:29:12] 2025-04-19 03:28:51,488 | INFO     |  -- lfn=log.44075483._074772.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 23:29:12] 2025-04-19 03:28:51,489 | INFO     | stage-out finished correctly
[2025-04-18 23:29:12] 2025-04-19 03:28:51,574 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 23:29:12] 2025-04-19 03:28:52,241 | INFO     | job 6606995356 has state=finished
[2025-04-18 23:29:12] 2025-04-19 03:28:52,242 | INFO     | preparing for final server update for job 6606995356 in state='finished'
[2025-04-18 23:29:12] 2025-04-19 03:28:52,242 | INFO     | this job has now completed (state=finished)
[2025-04-18 23:29:12] 2025-04-19 03:28:52,242 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 23:29:12] 2025-04-19 03:28:52,243 | INFO     | log transfer has been attempted: DONE
[2025-04-18 23:29:12] 2025-04-19 03:28:52,243 | INFO     | job 6606995356 has finished - writing final server update
[2025-04-18 23:29:12] 2025-04-19 03:28:52,243 | INFO     | total number of processed events: 400 (read)
[2025-04-18 23:29:12] 2025-04-19 03:28:52,245 | INFO     | executing command: lscpu
[2025-04-18 23:29:12] 2025-04-19 03:28:52,272 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 23:29:12] 2025-04-19 03:28:52,654 | INFO     | monitor loop #376: job 0:6606995356 is in state 'finished'
[2025-04-18 23:29:12] 2025-04-19 03:28:52,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 23:29:12] 2025-04-19 03:28:55,157 | INFO     | monitor loop #377: job 0:6606995356 is in state 'finished'
[2025-04-18 23:29:12] 2025-04-19 03:28:55,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 23:29:12] 2025-04-19 03:28:55,361 | INFO     | PID=28121 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 23:29:12] 2025-04-19 03:28:57,667 | INFO     | monitor loop #378: job 0:6606995356 is in state 'finished'
[2025-04-18 23:29:12] 2025-04-19 03:28:57,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 23:29:12] 2025-04-19 03:28:58,326 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 23:29:12] 2025-04-19 03:28:58,326 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606995356/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 23:29:12] 2025-04-19 03:28:58,327 | INFO     | extracted standard info from prmon json
[2025-04-18 23:29:12] 2025-04-19 03:28:58,327 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 23:29:12] 2025-04-19 03:28:58,328 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 23:29:12] 2025-04-19 03:28:58,328 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 23:29:12] 2025-04-19 03:28:58,328 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 23:29:12] 2025-04-19 03:28:58,331 | INFO     | fitting pss+swap vs Time
[2025-04-18 23:29:12] 2025-04-19 03:28:58,331 | INFO     | sum of square deviations: 130793150.0
[2025-04-18 23:29:12] 2025-04-19 03:28:58,332 | INFO     | sum of deviations: 24892444216.0
[2025-04-18 23:29:12] 2025-04-19 03:28:58,332 | INFO     | mean x: 1745030892.0
[2025-04-18 23:29:12] 2025-04-19 03:28:58,332 | INFO     | mean y: 2573570.3066666666
[2025-04-18 23:29:12] 2025-04-19 03:28:58,332 | INFO     | -- intersect: -332110263641.02075
[2025-04-18 23:29:12] 2025-04-19 03:28:58,332 | INFO     | intersect: -332110263641.02075
[2025-04-18 23:29:12] 2025-04-19 03:28:58,333 | INFO     | chi2: 1.8361015910931386
[2025-04-18 23:29:12] 2025-04-19 03:28:58,333 | INFO     | -- intersect: -332110263641.02075
[2025-04-18 23:29:12] 2025-04-19 03:28:58,333 | INFO     | current memory leak: 190.32 B/s (using 75 data points, chi2=1.84)
[2025-04-18 23:29:12] 2025-04-19 03:28:58,334 | INFO     | ..............................
[2025-04-18 23:29:12] 2025-04-19 03:28:58,334 | INFO     | . Timing measurements:
[2025-04-18 23:29:12] 2025-04-19 03:28:58,334 | INFO     | . get job = 0 s
[2025-04-18 23:29:12] 2025-04-19 03:28:58,334 | INFO     | . initial setup = 2 s
[2025-04-18 23:29:12] 2025-04-19 03:28:58,334 | INFO     | . payload setup = 7 s
[2025-04-18 23:29:12] 2025-04-19 03:28:58,334 | INFO     | . stage-in = 0 s
[2025-04-18 23:29:12] 2025-04-19 03:28:58,335 | INFO     | . payload execution = 5002 s
[2025-04-18 23:29:12] 2025-04-19 03:28:58,335 | INFO     | . stage-out = 0 s
[2025-04-18 23:29:12] 2025-04-19 03:28:58,335 | INFO     | . log creation = 0 s
[2025-04-18 23:29:12] 2025-04-19 03:28:58,335 | INFO     | ..............................
[2025-04-18 23:29:12] 2025-04-19 03:28:58,420 | INFO     | 
[2025-04-18 23:29:12] 2025-04-19 03:28:58,420 | INFO     | job summary report
[2025-04-18 23:29:12] 2025-04-19 03:28:58,420 | INFO     | --------------------------------------------------
[2025-04-18 23:29:12] 2025-04-19 03:28:58,420 | INFO     | PanDA job id: 6606995356
[2025-04-18 23:29:12] 2025-04-19 03:28:58,420 | INFO     | task id: 44075483
[2025-04-18 23:29:12] 2025-04-19 03:28:58,421 | INFO     | errors: (none)
[2025-04-18 23:29:12] 2025-04-19 03:28:58,421 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 23:29:12] 2025-04-19 03:28:58,421 | INFO     | pilot state: finished 
[2025-04-18 23:29:12] 2025-04-19 03:28:58,421 | INFO     | transexitcode: 0
[2025-04-18 23:29:12] 2025-04-19 03:28:58,421 | INFO     | exeerrorcode: 0
[2025-04-18 23:29:12] 2025-04-19 03:28:58,421 | INFO     | exeerrordiag: 
[2025-04-18 23:29:12] 2025-04-19 03:28:58,421 | INFO     | exitcode: 0
[2025-04-18 23:29:12] 2025-04-19 03:28:58,422 | INFO     | exitmsg: OK
[2025-04-18 23:29:12] 2025-04-19 03:28:58,422 | INFO     | cpuconsumptiontime: 46720 s
[2025-04-18 23:29:12] 2025-04-19 03:28:58,422 | INFO     | nevents: 400
[2025-04-18 23:29:12] 2025-04-19 03:28:58,422 | INFO     | neventsw: 0
[2025-04-18 23:29:12] 2025-04-19 03:28:58,422 | INFO     | pid: 3157
[2025-04-18 23:29:12] 2025-04-19 03:28:58,422 | INFO     | pgrp: 3157
[2025-04-18 23:29:12] 2025-04-19 03:28:58,423 | INFO     | corecount: 12
[2025-04-18 23:29:12] 2025-04-19 03:28:58,423 | INFO     | event service: False
[2025-04-18 23:29:12] 2025-04-19 03:28:58,423 | INFO     | sizes: {0: 2426652, 1: 2426851, 6: 2427057, 12: 2427085, 5013: 2453234, 5014: 2453233, 5015: 2462414, 5022: 2462528}
[2025-04-18 23:29:12] 2025-04-19 03:28:58,423 | INFO     | --------------------------------------------------
[2025-04-18 23:29:12] 2025-04-19 03:28:58,423 | INFO     | 
[2025-04-18 23:29:12] 2025-04-19 03:28:58,424 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 23:29:12] 2025-04-19 03:28:58,448 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,448 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,448 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,448 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,449 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,449 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,449 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,449 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,449 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,449 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,450 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,450 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,450 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,450 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 23:29:12] 2025-04-19 03:28:58,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 23:29:12] 2025-04-19 03:28:58,451 | INFO     | job 6606995356 has completed (purged errors)
[2025-04-18 23:29:12] 2025-04-19 03:28:58,452 | INFO     | overall cleanup function is called
[2025-04-18 23:29:12] 2025-04-19 03:28:59,460 | INFO     | --- collectZombieJob: --- 10, [3157]
[2025-04-18 23:29:12] 2025-04-19 03:28:59,460 | INFO     | zombie collector waiting for pid 3157
[2025-04-18 23:29:12] 2025-04-19 03:28:59,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 23:29:12] 2025-04-19 03:28:59,460 | INFO     | collected zombie processes
[2025-04-18 23:29:12] 2025-04-19 03:28:59,461 | INFO     | will attempt to kill all subprocesses of pid=3157
[2025-04-18 23:29:12] 2025-04-19 03:28:59,551 | INFO     | process IDs to be killed: [3157] (in reverse order)
[2025-04-18 23:29:12] 2025-04-19 03:28:59,604 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 23:29:12] 2025-04-19 03:28:59,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 23:29:12] 2025-04-19 03:28:59,607 | INFO     | did not find any defunct processes belonging to 3157
[2025-04-18 23:29:12] 2025-04-19 03:28:59,609 | INFO     | did not find any defunct processes belonging to 3157
[2025-04-18 23:29:12] 2025-04-19 03:28:59,609 | INFO     | ready for new job
[2025-04-18 23:29:12] 2025-04-19 03:28:59,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 23:29:12] 2025-04-19 03:28:59,610 | INFO     | **************************************
[2025-04-18 23:29:12] 2025-04-19 03:28:59,610 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 23:29:12] 2025-04-19 03:28:59,610 | INFO     | **************************************
[2025-04-18 23:29:12] 2025-04-19 03:28:59,610 | INFO     | 
[2025-04-18 23:29:12] 2025-04-19 03:28:59,611 | INFO     | architecture information:
[2025-04-18 23:29:12] 2025-04-19 03:28:59,611 | INFO     | executing command: cat /etc/os-release
[2025-04-18 23:29:12] 2025-04-19 03:28:59,626 | INFO     | cat /etc/os-release:
[2025-04-18 23:29:12] NAME="CentOS Linux"
[2025-04-18 23:29:12] VERSION="7 (Core)"
[2025-04-18 23:29:12] ID="centos"
[2025-04-18 23:29:12] ID_LIKE="rhel fedora"
[2025-04-18 23:29:12] VERSION_ID="7"
[2025-04-18 23:29:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 23:29:12] ANSI_COLOR="0;31"
[2025-04-18 23:29:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 23:29:12] HOME_URL="https://www.centos.org/"
[2025-04-18 23:29:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 23:29:12] 
[2025-04-18 23:29:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 23:29:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 23:29:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 23:29:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 23:29:12] 
[2025-04-18 23:29:12] 2025-04-19 03:28:59,626 | INFO     | **************************************
[2025-04-18 23:29:12] 2025-04-19 03:29:00,129 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 23:29:12] 2025-04-19 03:29:00,145 | INFO     | sufficient remaining disk space (29379002368 B)
[2025-04-18 23:29:12] 2025-04-19 03:29:00,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 23:29:12] 2025-04-19 03:29:00,146 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 23:29:12] 2025-04-19 03:29:00,146 | INFO     | update_server=False
[2025-04-18 23:29:12] 2025-04-19 03:29:00,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 23:29:12] 2025-04-19 03:29:00,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 23:29:12] 2025-04-19 03:29:00,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:29:12] 2025-04-19 03:29:00,147 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 23:29:12] 2025-04-19 03:29:00,148 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 23:29:12] 2025-04-19 03:29:00,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 23:29:12] 2025-04-19 03:29:00,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 23:29:12] 2025-04-19 03:29:00,170 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 23:29:12] 2025-04-19 03:29:00,171 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 23:29:12] 2025-04-19 03:29:00,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:29:12] 2025-04-19 03:29:00,171 | INFO     | will abort loop
[2025-04-18 23:29:12] 2025-04-19 03:29:00,699 | INFO     | all data control threads have been joined
[2025-04-18 23:29:12] 2025-04-19 03:29:01,106 | INFO     | all job control threads have been joined
[2025-04-18 23:29:12] 2025-04-19 03:29:01,150 | INFO     | [job] queue monitor thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:01,152 | INFO     | [job] retrieve thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:01,177 | INFO     | [job] job monitor thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:01,219 | INFO     | [data] copytool_in thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:01,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:01,335 | INFO     | [payload] validate_post thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:01,558 | INFO     | all payload control threads have been joined
[2025-04-18 23:29:12] 2025-04-19 03:29:01,704 | INFO     | [data] control thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:01,863 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:02,055 | INFO     | [job] validate thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:02,112 | INFO     | [job] control thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:02,125 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:02,152 | INFO     | [data] copytool_out thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:02,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 23:29:12] 2025-04-19 03:29:02,374 | INFO     | [payload] failed_post thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:02,498 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:02,563 | INFO     | [payload] control thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:06,172 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 23:29:12] 2025-04-19 03:29:07,579 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595340732224)>', '<ExcThread(monitor, started 140594009601792)>']
[2025-04-18 23:29:12] 2025-04-19 03:29:08,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 23:29:12] 2025-04-19 03:29:08,188 | INFO     | [monitor] control thread has ended
[2025-04-18 23:29:12] 2025-04-19 03:29:12,588 | INFO     | all workflow threads have been joined
[2025-04-18 23:29:12] 2025-04-19 03:29:12,588 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 23:29:12] 2025-04-19 03:29:12,588 | INFO     | traces error code: 0
[2025-04-18 23:29:12] 2025-04-19 03:29:12,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 23:29:12] 2025-04-19 03:29:12,676 [wrapper] ==== pilot stdout END ====
[2025-04-18 23:29:12] 2025-04-19 03:29:12,680 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 23:29:12] 2025-04-19 03:29:12,683 [wrapper] pilotpid: 28121
[2025-04-18 23:29:12] 2025-04-19 03:29:12,687 [wrapper] Pilot exit status: 0
[2025-04-18 23:29:12] 2025-04-19 03:29:12,701 [wrapper] pandaids: 6606995356
[2025-04-18 23:29:12] 2025-04-19 03:29:12,741 [wrapper] cleanup supervisor_pilot 21617 28122
[2025-04-18 23:29:12] 2025-04-19 03:29:12,745 [wrapper] Test setup, not cleaning
[2025-04-18 23:29:12] 2025-04-19 03:29:12,749 [wrapper] apfmon messages muted
[2025-04-18 23:29:12] 2025-04-19 03:29:12,753 [wrapper] ==== wrapper stdout END ====
[2025-04-18 23:29:12] 2025-04-19 03:29:12,757 [wrapper] ==== wrapper stderr END ====
[2025-04-18 23:29:12]  *** Error codes and diagnostics ***
[2025-04-18 23:29:12]     "exeErrorCode": 0,
[2025-04-18 23:29:12]     "exeErrorDiag": "",
[2025-04-18 23:29:12]     "pilotErrorCode": 0,
[2025-04-18 23:29:12]     "pilotErrorDiag": "",
[2025-04-18 23:29:12]  *** Listing of results directory ***
[2025-04-18 23:29:12] total 419500
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 19:06 pilot3.tar.gz
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 19:29 queuedata.json
[2025-04-18 23:29:12] -rwx------ 1 boincer umatlas     37140 Apr 18 19:30 runpilot2-wrapper.sh
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas       100 Apr 18 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 23:29:12] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 22:04 run_atlas
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas       105 Apr 18 22:04 job.xml
[2025-04-18 23:29:12] -rw-r--r-- 2 boincer umatlas 227093805 Apr 18 22:04 EVNT.44075481._002903.pool.root.1
[2025-04-18 23:29:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 22:04 start_atlas.sh
[2025-04-18 23:29:12] drwxrwx--x 2 boincer umatlas      4096 Apr 18 22:04 shared
[2025-04-18 23:29:12] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 22:04 input.tar.gz
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas         0 Apr 18 22:04 boinc_lockfile
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 22:04 pandaJob.out
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas       424 Apr 18 22:04 setup.sh.local
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas    991292 Apr 18 22:04 agis_schedconf.cvmfs.json
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas   1618536 Apr 18 22:04 agis_ddmendpoints.agis.ALL.json
[2025-04-18 23:29:12] drwx------ 4 boincer umatlas      4096 Apr 18 22:05 pilot3
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas      5867 Apr 18 23:18 init_data.xml
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas        95 Apr 18 23:28 pilot_heartbeat.json
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas 196939421 Apr 18 23:28 HITS.44075483._074772.pool.root.1
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas        27 Apr 18 23:28 wrapper_checkpoint.txt
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 23:28 boinc_mmap_file
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas       529 Apr 18 23:28 boinc_task_state.xml
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas      1051 Apr 18 23:28 memory_monitor_summary.json
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas    358972 Apr 18 23:28 log.44075483._074772.job.log.tgz.1
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas      7750 Apr 18 23:28 heartbeat.json
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas      4662 Apr 18 23:29 pilotlog.txt
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas    477091 Apr 18 23:29 log.44075483._074772.job.log.1
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas       357 Apr 18 23:29 output.list
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas       620 Apr 18 23:29 runtime_log
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas    860160 Apr 18 23:29 result.tar.gz
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 23:29 runtime_log.err
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas       658 Apr 18 23:29 3swLDmJLAQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmzOgLDmtzaYqm.diag
[2025-04-18 23:29:12] -rw-r--r-- 1 boincer umatlas     21583 Apr 18 23:29 stderr.txt
[2025-04-18 23:29:12] HITS file was successfully produced:
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas 196939421 Apr 18 23:28 shared/HITS.pool.root.1
[2025-04-18 23:29:12]  *** Contents of shared directory: ***
[2025-04-18 23:29:12] total 415456
[2025-04-18 23:29:12] -rw-r--r-- 2 boincer umatlas 227093805 Apr 18 22:04 ATLAS.root_0
[2025-04-18 23:29:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 22:04 start_atlas.sh
[2025-04-18 23:29:12] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 22:04 input.tar.gz
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas 196939421 Apr 18 23:28 HITS.pool.root.1
[2025-04-18 23:29:12] -rw------- 1 boincer umatlas    860160 Apr 18 23:29 result.tar.gz
23:29:14 (24514): run_atlas exited; CPU time 46707.472947
23:29:14 (24514): called boinc_finish(0)

</stderr_txt>
]]>

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