Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:50:30 (935307): wrapper (7.7.26015): starting
21:50:30 (935307): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 21:50:30] Arguments: --nthreads 8
[2025-04-18 21:50:30] Threads: 8
[2025-04-18 21:50:30] Checking for CVMFS
[2025-04-18 21:50:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 21:50:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 21:50:32] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 21:50:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 21:50:33] 2.12.6.0 4008888 153884 966316 145021 3 269 32657733 32935937 33057 130560 0 175612429 99.680 151313665 19609 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-18 21:50:33] CVMFS is ok
[2025-04-18 21:50:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 21:50:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 21:50:33] Further information can be found at the LHC@home message board.
[2025-04-18 21:50:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 21:50:33] Checking for apptainer binary...
[2025-04-18 21:50:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 21:50:33] Running /usr/bin/apptainer --version
[2025-04-18 21:50:33] apptainer version 1.4.0-1.el9
[2025-04-18 21:50:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 21:50:34] c-1-1.aglt2.org
[2025-04-18 21:50:34] apptainer works
[2025-04-18 21:50:34] Set ATHENA_PROC_NUMBER=8
[2025-04-18 21:50:34] Set ATHENA_CORE_NUMBER=8
[2025-04-18 21:50:34] Starting ATLAS job with PandaID=6604147825
[2025-04-18 21:50:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 02:43:37]  *** The last 200 lines of the pilot log: ***
[2025-04-19 02:43:37] 2025-04-19 06:43:15,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 02:43:37] 2025-04-19 06:43:15,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 02:43:37] 2025-04-19 06:43:15,342 | INFO     | fitting pss+swap vs Time
[2025-04-19 02:43:37] 2025-04-19 06:43:15,370 | INFO     | sum of square deviations: 6953802171.602847
[2025-04-19 02:43:37] 2025-04-19 06:43:15,373 | INFO     | sum of deviations: 99280129426.67381
[2025-04-19 02:43:37] 2025-04-19 06:43:15,373 | INFO     | mean x: 1745036307.9078014
[2025-04-19 02:43:37] 2025-04-19 06:43:15,373 | INFO     | mean y: 2032625.1028368794
[2025-04-19 02:43:37] 2025-04-19 06:43:15,373 | INFO     | -- intersect: -24912025357.5674
[2025-04-19 02:43:37] 2025-04-19 06:43:15,373 | INFO     | intersect: -24912025357.5674
[2025-04-19 02:43:37] 2025-04-19 06:43:15,374 | INFO     | chi2: 12.809965495513731
[2025-04-19 02:43:37] 2025-04-19 06:43:15,385 | INFO     | sum of square deviations: 6590472293.256337
[2025-04-19 02:43:37] 2025-04-19 06:43:15,387 | INFO     | sum of deviations: 169963204030.47644
[2025-04-19 02:43:37] 2025-04-19 06:43:15,387 | INFO     | mean x: 1745036155.4151626
[2025-04-19 02:43:37] 2025-04-19 06:43:15,388 | INFO     | mean y: 2062294.7436823105
[2025-04-19 02:43:37] 2025-04-19 06:43:15,388 | INFO     | -- intersect: -45001076012.48681
[2025-04-19 02:43:37] 2025-04-19 06:43:15,388 | INFO     | intersect: -45001076012.48681
[2025-04-19 02:43:37] 2025-04-19 06:43:15,400 | INFO     | chi2: 9.422648032598369
[2025-04-19 02:43:37] 2025-04-19 06:43:15,401 | INFO     | current chi2=9.422648032598369 (change=26.442830498658708 %)
[2025-04-19 02:43:37] 2025-04-19 06:43:15,401 | INFO     | sum of square deviations: 6239992705.055155
[2025-04-19 02:43:37] 2025-04-19 06:43:15,403 | INFO     | sum of deviations: 184322939558.32336
[2025-04-19 02:43:37] 2025-04-19 06:43:15,403 | INFO     | mean x: 1745036002.9154413
[2025-04-19 02:43:37] 2025-04-19 06:43:15,404 | INFO     | mean y: 2068437.9705882352
[2025-04-19 02:43:37] 2025-04-19 06:43:15,404 | INFO     | -- intersect: -51544492735.39508
[2025-04-19 02:43:37] 2025-04-19 06:43:15,404 | INFO     | intersect: -51544492735.39508
[2025-04-19 02:43:37] 2025-04-19 06:43:15,404 | INFO     | chi2: 8.584822266633052
[2025-04-19 02:43:37] 2025-04-19 06:43:15,404 | INFO     | current chi2=8.584822266633052 (change=8.89161691136923 %)
[2025-04-19 02:43:37] 2025-04-19 06:43:15,404 | INFO     | right removable region: 271
[2025-04-19 02:43:37] 2025-04-19 06:43:15,405 | INFO     | sum of square deviations: 6590436300.902575
[2025-04-19 02:43:37] 2025-04-19 06:43:15,411 | INFO     | sum of deviations: 27057756257.1372
[2025-04-19 02:43:37] 2025-04-19 06:43:15,412 | INFO     | mean x: 1745036460.4079423
[2025-04-19 02:43:37] 2025-04-19 06:43:15,412 | INFO     | mean y: 2062892.57400722
[2025-04-19 02:43:37] 2025-04-19 06:43:15,412 | INFO     | -- intersect: -7162374945.793252
[2025-04-19 02:43:37] 2025-04-19 06:43:15,412 | INFO     | intersect: -7162374945.793252
[2025-04-19 02:43:37] 2025-04-19 06:43:15,412 | INFO     | chi2: 8.967472487230147
[2025-04-19 02:43:37] 2025-04-19 06:43:15,412 | INFO     | current chi2=8.967472487230147 (change=29.996123015548253 %)
[2025-04-19 02:43:37] 2025-04-19 06:43:15,413 | INFO     | sum of square deviations: 6239920845.055155
[2025-04-19 02:43:37] 2025-04-19 06:43:15,419 | INFO     | sum of deviations: -16406329815.121334
[2025-04-19 02:43:37] 2025-04-19 06:43:15,419 | INFO     | mean x: 1745036612.9154413
[2025-04-19 02:43:37] 2025-04-19 06:43:15,419 | INFO     | mean y: 2081795.3860294118
[2025-04-19 02:43:37] 2025-04-19 06:43:15,419 | INFO     | -- intersect: 4590224325.052989
[2025-04-19 02:43:37] 2025-04-19 06:43:15,419 | INFO     | intersect: 4590224325.052989
[2025-04-19 02:43:37] 2025-04-19 06:43:15,420 | INFO     | chi2: 7.606419411299214
[2025-04-19 02:43:37] 2025-04-19 06:43:15,420 | INFO     | current chi2=7.606419411299214 (change=15.177666593001524 %)
[2025-04-19 02:43:37] 2025-04-19 06:43:15,420 | INFO     | left removable region: 20
[2025-04-19 02:43:37] 2025-04-19 06:43:15,420 | INFO     | sum of square deviations: 4903305249.79284
[2025-04-19 02:43:37] 2025-04-19 06:43:15,422 | INFO     | sum of deviations: -17081297311.944223
[2025-04-19 02:43:37] 2025-04-19 06:43:15,426 | INFO     | mean x: 1745036582.438247
[2025-04-19 02:43:37] 2025-04-19 06:43:15,426 | INFO     | mean y: 2163636.035856574
[2025-04-19 02:43:37] 2025-04-19 06:43:15,426 | INFO     | -- intersect: 6081224018.03147
[2025-04-19 02:43:37] 2025-04-19 06:43:15,426 | INFO     | intersect: 6081224018.03147
[2025-04-19 02:43:37] 2025-04-19 06:43:15,427 | INFO     | chi2: 0.3738244265076932
[2025-04-19 02:43:37] 2025-04-19 06:43:15,427 | INFO     | -- intersect: 6081224018.03147
[2025-04-19 02:43:37] 2025-04-19 06:43:15,427 | INFO     | current memory leak: -3.48 B/s (using 251 data points, chi2=0.37)
[2025-04-19 02:43:37] 2025-04-19 06:43:15,432 | INFO     | ..............................
[2025-04-19 02:43:37] 2025-04-19 06:43:15,432 | INFO     | . Timing measurements:
[2025-04-19 02:43:37] 2025-04-19 06:43:15,432 | INFO     | . get job = 0 s
[2025-04-19 02:43:37] 2025-04-19 06:43:15,432 | INFO     | . initial setup = 7 s
[2025-04-19 02:43:37] 2025-04-19 06:43:15,433 | INFO     | . payload setup = 65 s
[2025-04-19 02:43:37] 2025-04-19 06:43:15,433 | INFO     | . stage-in = 0 s
[2025-04-19 02:43:37] 2025-04-19 06:43:15,433 | INFO     | . payload execution = 17216 s
[2025-04-19 02:43:37] 2025-04-19 06:43:15,433 | INFO     | . stage-out = 12 s
[2025-04-19 02:43:37] 2025-04-19 06:43:15,433 | INFO     | . log creation = 1 s
[2025-04-19 02:43:37] 2025-04-19 06:43:15,433 | INFO     | ..............................
[2025-04-19 02:43:37] 2025-04-19 06:43:15,447 | INFO     | monitor loop #718: job 0:6604147825 is in state 'finished'
[2025-04-19 02:43:37] 2025-04-19 06:43:15,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 02:43:37] 2025-04-19 06:43:16,029 | INFO     | 
[2025-04-19 02:43:37] 2025-04-19 06:43:16,029 | INFO     | job summary report
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | --------------------------------------------------
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | PanDA job id: 6604147825
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | task id: 44075483
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | errors: (none)
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | pilot state: finished 
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | transexitcode: 0
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | exeerrorcode: 0
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | exeerrordiag: 
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | exitcode: 0
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | exitmsg: OK
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | cpuconsumptiontime: 44518 s
[2025-04-19 02:43:37] 2025-04-19 06:43:16,030 | INFO     | nevents: 400
[2025-04-19 02:43:37] 2025-04-19 06:43:16,031 | INFO     | neventsw: 0
[2025-04-19 02:43:37] 2025-04-19 06:43:16,031 | INFO     | pid: 979463
[2025-04-19 02:43:37] 2025-04-19 06:43:16,031 | INFO     | pgrp: 979463
[2025-04-19 02:43:37] 2025-04-19 06:43:16,031 | INFO     | corecount: 8
[2025-04-19 02:43:37] 2025-04-19 06:43:16,031 | INFO     | event service: False
[2025-04-19 02:43:37] 2025-04-19 06:43:16,031 | INFO     | sizes: {0: 2426596, 1: 2426652, 2: 2426680, 3: 2426907, 4: 2426907, 16: 2426935, 27: 2427091, 38: 2427119, 50: 2427147, 52: 2427381, 61: 2427409, 17294: 2458365, 1
[2025-04-19 02:43:37] 2025-04-19 06:43:16,031 | INFO     | --------------------------------------------------
[2025-04-19 02:43:37] 2025-04-19 06:43:16,031 | INFO     | 
[2025-04-19 02:43:37] 2025-04-19 06:43:16,031 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 02:43:37] 2025-04-19 06:43:16,274 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,274 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,275 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,276 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 02:43:37] 2025-04-19 06:43:16,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,276 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 02:43:37] 2025-04-19 06:43:16,276 | INFO     | job 6604147825 has completed (purged errors)
[2025-04-19 02:43:37] 2025-04-19 06:43:16,276 | INFO     | overall cleanup function is called
[2025-04-19 02:43:37] 2025-04-19 06:43:16,386 | INFO     | PID=948908 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 02:43:37] 2025-04-19 06:43:16,386 | INFO     | .. there are 84 such processes running
[2025-04-19 02:43:37] 2025-04-19 06:43:17,314 | INFO     | --- collectZombieJob: --- 10, [979463]
[2025-04-19 02:43:37] 2025-04-19 06:43:17,314 | INFO     | zombie collector waiting for pid 979463
[2025-04-19 02:43:37] 2025-04-19 06:43:17,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 02:43:37] 2025-04-19 06:43:17,314 | INFO     | collected zombie processes
[2025-04-19 02:43:37] 2025-04-19 06:43:17,315 | INFO     | will attempt to kill all subprocesses of pid=979463
[2025-04-19 02:43:37] 2025-04-19 06:43:20,430 | INFO     | process IDs to be killed: [979463] (in reverse order)
[2025-04-19 02:43:37] 2025-04-19 06:43:21,708 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 02:43:37] 2025-04-19 06:43:21,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 02:43:37] 2025-04-19 06:43:22,115 | INFO     | did not find any defunct processes belonging to 979463
[2025-04-19 02:43:37] 2025-04-19 06:43:22,412 | INFO     | did not find any defunct processes belonging to 979463
[2025-04-19 02:43:37] 2025-04-19 06:43:22,413 | INFO     | ready for new job
[2025-04-19 02:43:37] 2025-04-19 06:43:22,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 02:43:37] 2025-04-19 06:43:22,442 | INFO     | **************************************
[2025-04-19 02:43:37] 2025-04-19 06:43:22,442 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 02:43:37] 2025-04-19 06:43:22,443 | INFO     | **************************************
[2025-04-19 02:43:37] 2025-04-19 06:43:22,443 | INFO     | 
[2025-04-19 02:43:37] 2025-04-19 06:43:22,494 | INFO     | architecture information:
[2025-04-19 02:43:37] 2025-04-19 06:43:22,518 | INFO     | executing command: cat /etc/os-release
[2025-04-19 02:43:37] 2025-04-19 06:43:22,608 | INFO     | cat /etc/os-release:
[2025-04-19 02:43:37] NAME="CentOS Linux"
[2025-04-19 02:43:37] VERSION="7 (Core)"
[2025-04-19 02:43:37] ID="centos"
[2025-04-19 02:43:37] ID_LIKE="rhel fedora"
[2025-04-19 02:43:37] VERSION_ID="7"
[2025-04-19 02:43:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 02:43:37] ANSI_COLOR="0;31"
[2025-04-19 02:43:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 02:43:37] HOME_URL="https://www.centos.org/"
[2025-04-19 02:43:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 02:43:37] 
[2025-04-19 02:43:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 02:43:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 02:43:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 02:43:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 02:43:37] 
[2025-04-19 02:43:37] 2025-04-19 06:43:22,609 | INFO     | **************************************
[2025-04-19 02:43:37] 2025-04-19 06:43:23,112 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 02:43:37] 2025-04-19 06:43:23,241 | INFO     | sufficient remaining disk space (74222403584 B)
[2025-04-19 02:43:37] 2025-04-19 06:43:23,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 02:43:37] 2025-04-19 06:43:23,241 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 02:43:37] 2025-04-19 06:43:23,241 | INFO     | update_server=False
[2025-04-19 02:43:37] 2025-04-19 06:43:23,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 02:43:37] 2025-04-19 06:43:23,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 02:43:37] 2025-04-19 06:43:23,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 02:43:37] 2025-04-19 06:43:23,261 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 02:43:37] 2025-04-19 06:43:23,262 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 02:43:37] 2025-04-19 06:43:23,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 02:43:37] 2025-04-19 06:43:23,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 02:43:37] 2025-04-19 06:43:23,843 | INFO     | all data control threads have been joined
[2025-04-19 02:43:37] 2025-04-19 06:43:24,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:43:37] 2025-04-19 06:43:24,009 | INFO     | aborting loop
[2025-04-19 02:43:37] 2025-04-19 06:43:24,248 | INFO     | [job] retrieve thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:24,512 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:24,513 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:24,571 | INFO     | [payload] validate_post thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:24,597 | INFO     | all payload control threads have been joined
[2025-04-19 02:43:37] 2025-04-19 06:43:24,671 | INFO     | [job] validate thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:24,849 | INFO     | all job control threads have been joined
[2025-04-19 02:43:37] 2025-04-19 06:43:24,850 | INFO     | [data] control thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:24,972 | INFO     | [payload] failed_post thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:25,017 | INFO     | [job] job monitor thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:25,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 02:43:37] 2025-04-19 06:43:25,145 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:25,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:25,175 | INFO     | [data] copytool_in thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:25,251 | INFO     | [data] copytool_out thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:25,605 | INFO     | [payload] control thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:25,870 | INFO     | [job] control thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:26,151 | INFO     | [job] queue monitor thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:27,267 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 02:43:37] 2025-04-19 06:43:28,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196879525696)>', '<ExcThread(monitor, started 140196246972160)>']
[2025-04-19 02:43:37] 2025-04-19 06:43:28,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 02:43:37] 2025-04-19 06:43:28,315 | INFO     | [monitor] control thread has ended
[2025-04-19 02:43:37] 2025-04-19 06:43:33,126 | INFO     | all workflow threads have been joined
[2025-04-19 02:43:37] 2025-04-19 06:43:33,126 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 02:43:37] 2025-04-19 06:43:33,127 | INFO     | traces error code: 0
[2025-04-19 02:43:37] 2025-04-19 06:43:33,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 02:43:37] 2025-04-19 06:43:35,505 [wrapper] ==== pilot stdout END ====
[2025-04-19 02:43:37] 2025-04-19 06:43:35,543 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 02:43:37] 2025-04-19 06:43:35,567 [wrapper] pilotpid: 948908
[2025-04-19 02:43:37] 2025-04-19 06:43:35,644 [wrapper] Pilot exit status: 0
[2025-04-19 02:43:37] 2025-04-19 06:43:35,846 [wrapper] pandaids: 6604147825
[2025-04-19 02:43:37] 2025-04-19 06:43:36,364 [wrapper] cleanup supervisor_pilot 3627505 948909
[2025-04-19 02:43:37] 2025-04-19 06:43:36,402 [wrapper] Test setup, not cleaning
[2025-04-19 02:43:37] 2025-04-19 06:43:36,426 [wrapper] apfmon messages muted
[2025-04-19 02:43:37] 2025-04-19 06:43:36,475 [wrapper] ==== wrapper stdout END ====
[2025-04-19 02:43:37] 2025-04-19 06:43:36,491 [wrapper] ==== wrapper stderr END ====
[2025-04-19 02:43:37]  *** Error codes and diagnostics ***
[2025-04-19 02:43:37]     "exeErrorCode": 0,
[2025-04-19 02:43:37]     "exeErrorDiag": "",
[2025-04-19 02:43:37]     "pilotErrorCode": 0,
[2025-04-19 02:43:37]     "pilotErrorDiag": "",
[2025-04-19 02:43:37]  *** Listing of results directory ***
[2025-04-19 02:43:37] total 415560
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas    495897 Apr 16 11:16 pilot3.tar.gz
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas      5111 Apr 16 11:55 queuedata.json
[2025-04-19 02:43:37] -rwx------. 1 boincer umatlas     37140 Apr 16 11:55 runpilot2-wrapper.sh
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas       100 Apr 18 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 02:43:37] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 21:50 run_atlas
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas       105 Apr 18 21:50 job.xml
[2025-04-19 02:43:37] -rw-r--r--. 2 boincer umatlas 224983489 Apr 18 21:50 EVNT.44075481._001656.pool.root.1
[2025-04-19 02:43:37] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 21:50 start_atlas.sh
[2025-04-19 02:43:37] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 21:50 shared
[2025-04-19 02:43:37] -rw-r--r--. 2 boincer umatlas    508893 Apr 18 21:50 input.tar.gz
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas         0 Apr 18 21:50 boinc_lockfile
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas      2578 Apr 18 21:50 pandaJob.out
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas       467 Apr 18 21:50 setup.sh.local
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas    991292 Apr 18 21:51 agis_schedconf.cvmfs.json
[2025-04-19 02:43:37] drwx------. 4 boincer umatlas      4096 Apr 18 21:52 pilot3
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas 193742543 Apr 19 02:35 HITS.44075483._042315.pool.root.1
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas       531 Apr 19 02:36 boinc_task_state.xml
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas      6837 Apr 19 02:39 init_data.xml
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas      1043 Apr 19 02:41 memory_monitor_summary.json
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas   1618536 Apr 19 02:42 agis_ddmendpoints.agis.ALL.json
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas    407845 Apr 19 02:42 log.44075483._042315.job.log.tgz.1
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas        95 Apr 19 02:42 pilot_heartbeat.json
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas      7726 Apr 19 02:43 heartbeat.json
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 02:43 boinc_mmap_file
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas        28 Apr 19 02:43 wrapper_checkpoint.txt
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas      4476 Apr 19 02:43 pilotlog.txt
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas   1061198 Apr 19 02:43 log.44075483._042315.job.log.1
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas       357 Apr 19 02:43 output.list
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas       620 Apr 19 02:43 runtime_log
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas   1484800 Apr 19 02:43 result.tar.gz
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas     11404 Apr 19 02:43 runtime_log.err
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas       653 Apr 19 02:43 29jKDmrHKP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm6l2KDmkmlBim.diag
[2025-04-19 02:43:37] -rw-r--r--. 1 boincer umatlas     21014 Apr 19 02:43 stderr.txt
[2025-04-19 02:43:37] HITS file was successfully produced:
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas 193742543 Apr 19 02:35 shared/HITS.pool.root.1
[2025-04-19 02:43:37]  *** Contents of shared directory: ***
[2025-04-19 02:43:37] total 410896
[2025-04-19 02:43:37] -rw-r--r--. 2 boincer umatlas 224983489 Apr 18 21:50 ATLAS.root_0
[2025-04-19 02:43:37] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 21:50 start_atlas.sh
[2025-04-19 02:43:37] -rw-r--r--. 2 boincer umatlas    508893 Apr 18 21:50 input.tar.gz
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas 193742543 Apr 19 02:35 HITS.pool.root.1
[2025-04-19 02:43:37] -rw-------. 1 boincer umatlas   1484800 Apr 19 02:43 result.tar.gz
02:43:38 (935307): run_atlas exited; CPU time 45453.636982
02:43:38 (935307): called boinc_finish(0)

</stderr_txt>
]]>

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