Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:50:56 (6152): wrapper (7.7.26015): starting
21:50:56 (6152): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 21:50:56] Arguments: --nthreads 12
[2025-04-18 21:50:56] Threads: 12
[2025-04-18 21:50:56] Checking for CVMFS
[2025-04-18 21:50:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 21:50:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 21:50:56] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 21:50:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 21:50:56] 2.11.2.0 10400 368779 161804 145021 3 56 19499451 20275200 1 130560 0 24088849 99.990 7359278 55016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 21:50:56] CVMFS is ok
[2025-04-18 21:50:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 21:50:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 21:50:56] Further information can be found at the LHC@home message board.
[2025-04-18 21:50:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 21:50:56] Checking for apptainer binary...
[2025-04-18 21:50:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 21:50:56] Running /usr/bin/apptainer --version
[2025-04-18 21:50:56] apptainer version 1.3.2-1.el7
[2025-04-18 21:50:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 21:50:57] c-205-26.aglt2.org
[2025-04-18 21:50:57] apptainer works
[2025-04-18 21:50:57] Set ATHENA_PROC_NUMBER=12
[2025-04-18 21:50:57] Set ATHENA_CORE_NUMBER=12
[2025-04-18 21:50:58] Starting ATLAS job with PandaID=6606242384
[2025-04-18 21:50:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 23:15:27]  *** The last 200 lines of the pilot log: ***
[2025-04-18 23:15:27]  is_altstaged=None
[2025-04-18 23:15:27]  is_tar=False
[2025-04-18 23:15:27]  lfn=log.44075483._066612.job.log.tgz.1
[2025-04-18 23:15:27]  mtime=0
[2025-04-18 23:15:27]  protocol_id=None
[2025-04-18 23:15:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 23:15:27]  replicas=None
[2025-04-18 23:15:27]  scope=mc23_13p6TeV
[2025-04-18 23:15:27]  status=None
[2025-04-18 23:15:27]  status_code=0
[2025-04-18 23:15:27]  storage_token=
[2025-04-18 23:15:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606242384/log.44075483._066612.job.log.tgz.1
[2025-04-18 23:15:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/5a/log.44075483._066612.job.log.tgz.1
[2025-04-18 23:15:27]  workdir=None
[2025-04-18 23:15:27] ]
[2025-04-18 23:15:27] 2025-04-19 03:15:07,750 | INFO     | transferring file log.44075483._066612.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606242384/log.44075483._066612.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 23:15:27] 2025-04-19 03:15:07,750 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606242384/log.44075483._066612.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._066612.job
[2025-04-18 23:15:27] 2025-04-19 03:15:07,771 | INFO     | adding to output.list: log.44075483._066612.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/5a/log.44075483._066612.job.log.tg
[2025-04-18 23:15:27] 2025-04-19 03:15:07,772 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 23:15:27] 2025-04-19 03:15:07,772 | INFO     | summary of transferred files:
[2025-04-18 23:15:27] 2025-04-19 03:15:07,772 | INFO     |  -- lfn=log.44075483._066612.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 23:15:27] 2025-04-19 03:15:07,773 | INFO     | stage-out finished correctly
[2025-04-18 23:15:27] 2025-04-19 03:15:09,388 | INFO     | monitor loop #376: job 0:6606242384 is in state 'finished'
[2025-04-18 23:15:27] 2025-04-19 03:15:09,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 23:15:27] 2025-04-19 03:15:09,821 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 23:15:27] 2025-04-19 03:15:09,996 | INFO     | job 6606242384 has state=finished
[2025-04-18 23:15:27] 2025-04-19 03:15:09,996 | INFO     | preparing for final server update for job 6606242384 in state='finished'
[2025-04-18 23:15:27] 2025-04-19 03:15:09,997 | INFO     | this job has now completed (state=finished)
[2025-04-18 23:15:27] 2025-04-19 03:15:09,997 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 23:15:27] 2025-04-19 03:15:09,997 | INFO     | log transfer has been attempted: DONE
[2025-04-18 23:15:27] 2025-04-19 03:15:09,997 | INFO     | job 6606242384 has finished - writing final server update
[2025-04-18 23:15:27] 2025-04-19 03:15:09,997 | INFO     | total number of processed events: 400 (read)
[2025-04-18 23:15:27] 2025-04-19 03:15:09,999 | INFO     | executing command: lscpu
[2025-04-18 23:15:27] 2025-04-19 03:15:10,028 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 23:15:27] 2025-04-19 03:15:11,891 | INFO     | monitor loop #377: job 0:6606242384 is in state 'finished'
[2025-04-18 23:15:27] 2025-04-19 03:15:11,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 23:15:27] 2025-04-19 03:15:14,394 | INFO     | monitor loop #378: job 0:6606242384 is in state 'finished'
[2025-04-18 23:15:27] 2025-04-19 03:15:14,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 23:15:27] 2025-04-19 03:15:14,835 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 23:15:27] 2025-04-19 03:15:14,840 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606242384/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 23:15:27] 2025-04-19 03:15:14,841 | INFO     | extracted standard info from prmon json
[2025-04-18 23:15:27] 2025-04-19 03:15:14,841 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 23:15:27] 2025-04-19 03:15:14,841 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 23:15:27] 2025-04-19 03:15:14,842 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 23:15:27] 2025-04-19 03:15:14,842 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 23:15:27] 2025-04-19 03:15:14,844 | INFO     | fitting pss+swap vs Time
[2025-04-18 23:15:27] 2025-04-19 03:15:14,844 | INFO     | sum of square deviations: 136095575.0
[2025-04-18 23:15:27] 2025-04-19 03:15:14,844 | INFO     | sum of deviations: 24925478705.0
[2025-04-18 23:15:27] 2025-04-19 03:15:14,844 | INFO     | mean x: 1745030092.5
[2025-04-18 23:15:27] 2025-04-19 03:15:14,844 | INFO     | mean y: 2513451.710526316
[2025-04-18 23:15:27] 2025-04-19 03:15:14,845 | INFO     | -- intersect: -319594287621.307
[2025-04-18 23:15:27] 2025-04-19 03:15:14,845 | INFO     | intersect: -319594287621.307
[2025-04-18 23:15:27] 2025-04-19 03:15:14,845 | INFO     | chi2: 1.7071054623689756
[2025-04-18 23:15:27] 2025-04-19 03:15:14,845 | INFO     | -- intersect: -319594287621.307
[2025-04-18 23:15:27] 2025-04-19 03:15:14,845 | INFO     | current memory leak: 183.15 B/s (using 76 data points, chi2=1.71)
[2025-04-18 23:15:27] 2025-04-19 03:15:14,846 | INFO     | ..............................
[2025-04-18 23:15:27] 2025-04-19 03:15:14,846 | INFO     | . Timing measurements:
[2025-04-18 23:15:27] 2025-04-19 03:15:14,846 | INFO     | . get job = 0 s
[2025-04-18 23:15:27] 2025-04-19 03:15:14,846 | INFO     | . initial setup = 2 s
[2025-04-18 23:15:27] 2025-04-19 03:15:14,846 | INFO     | . payload setup = 7 s
[2025-04-18 23:15:27] 2025-04-19 03:15:14,846 | INFO     | . stage-in = 0 s
[2025-04-18 23:15:27] 2025-04-19 03:15:14,846 | INFO     | . payload execution = 5008 s
[2025-04-18 23:15:27] 2025-04-19 03:15:14,846 | INFO     | . stage-out = 0 s
[2025-04-18 23:15:27] 2025-04-19 03:15:14,846 | INFO     | . log creation = 0 s
[2025-04-18 23:15:27] 2025-04-19 03:15:14,847 | INFO     | ..............................
[2025-04-18 23:15:27] 2025-04-19 03:15:15,159 | INFO     | 
[2025-04-18 23:15:27] 2025-04-19 03:15:15,160 | INFO     | job summary report
[2025-04-18 23:15:27] 2025-04-19 03:15:15,160 | INFO     | --------------------------------------------------
[2025-04-18 23:15:27] 2025-04-19 03:15:15,160 | INFO     | PanDA job id: 6606242384
[2025-04-18 23:15:27] 2025-04-19 03:15:15,160 | INFO     | task id: 44075483
[2025-04-18 23:15:27] 2025-04-19 03:15:15,160 | INFO     | errors: (none)
[2025-04-18 23:15:27] 2025-04-19 03:15:15,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 23:15:27] 2025-04-19 03:15:15,161 | INFO     | pilot state: finished 
[2025-04-18 23:15:27] 2025-04-19 03:15:15,161 | INFO     | transexitcode: 0
[2025-04-18 23:15:27] 2025-04-19 03:15:15,161 | INFO     | exeerrorcode: 0
[2025-04-18 23:15:27] 2025-04-19 03:15:15,161 | INFO     | exeerrordiag: 
[2025-04-18 23:15:27] 2025-04-19 03:15:15,161 | INFO     | exitcode: 0
[2025-04-18 23:15:27] 2025-04-19 03:15:15,161 | INFO     | exitmsg: OK
[2025-04-18 23:15:27] 2025-04-19 03:15:15,161 | INFO     | cpuconsumptiontime: 46308 s
[2025-04-18 23:15:27] 2025-04-19 03:15:15,162 | INFO     | nevents: 400
[2025-04-18 23:15:27] 2025-04-19 03:15:15,162 | INFO     | neventsw: 0
[2025-04-18 23:15:27] 2025-04-19 03:15:15,162 | INFO     | pid: 16249
[2025-04-18 23:15:27] 2025-04-19 03:15:15,162 | INFO     | pgrp: 16249
[2025-04-18 23:15:27] 2025-04-19 03:15:15,162 | INFO     | corecount: 12
[2025-04-18 23:15:27] 2025-04-19 03:15:15,162 | INFO     | event service: False
[2025-04-18 23:15:27] 2025-04-19 03:15:15,163 | INFO     | sizes: {0: 2426602, 1: 2426801, 6: 2427007, 11: 2427035, 5020: 2453212, 5021: 2462153, 5023: 2462337, 5028: 2462507}
[2025-04-18 23:15:27] 2025-04-19 03:15:15,163 | INFO     | --------------------------------------------------
[2025-04-18 23:15:27] 2025-04-19 03:15:15,163 | INFO     | 
[2025-04-18 23:15:27] 2025-04-19 03:15:15,163 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 23:15:27] 2025-04-19 03:15:15,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 23:15:27] 2025-04-19 03:15:15,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 23:15:27] 2025-04-19 03:15:15,189 | INFO     | job 6606242384 has completed (purged errors)
[2025-04-18 23:15:27] 2025-04-19 03:15:15,189 | INFO     | overall cleanup function is called
[2025-04-18 23:15:27] 2025-04-19 03:15:16,198 | INFO     | --- collectZombieJob: --- 10, [16249]
[2025-04-18 23:15:27] 2025-04-19 03:15:16,198 | INFO     | zombie collector waiting for pid 16249
[2025-04-18 23:15:27] 2025-04-19 03:15:16,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 23:15:27] 2025-04-19 03:15:16,198 | INFO     | collected zombie processes
[2025-04-18 23:15:27] 2025-04-19 03:15:16,198 | INFO     | will attempt to kill all subprocesses of pid=16249
[2025-04-18 23:15:27] 2025-04-19 03:15:16,290 | INFO     | process IDs to be killed: [16249] (in reverse order)
[2025-04-18 23:15:27] 2025-04-19 03:15:16,341 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 23:15:27] 2025-04-19 03:15:16,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 23:15:27] 2025-04-19 03:15:16,345 | INFO     | did not find any defunct processes belonging to 16249
[2025-04-18 23:15:27] 2025-04-19 03:15:16,348 | INFO     | did not find any defunct processes belonging to 16249
[2025-04-18 23:15:27] 2025-04-19 03:15:16,348 | INFO     | ready for new job
[2025-04-18 23:15:27] 2025-04-19 03:15:16,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 23:15:27] 2025-04-19 03:15:16,349 | INFO     | **************************************
[2025-04-18 23:15:27] 2025-04-19 03:15:16,349 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 23:15:27] 2025-04-19 03:15:16,349 | INFO     | **************************************
[2025-04-18 23:15:27] 2025-04-19 03:15:16,349 | INFO     | 
[2025-04-18 23:15:27] 2025-04-19 03:15:16,350 | INFO     | architecture information:
[2025-04-18 23:15:27] 2025-04-19 03:15:16,350 | INFO     | executing command: cat /etc/os-release
[2025-04-18 23:15:27] 2025-04-19 03:15:16,364 | INFO     | cat /etc/os-release:
[2025-04-18 23:15:27] NAME="CentOS Linux"
[2025-04-18 23:15:27] VERSION="7 (Core)"
[2025-04-18 23:15:27] ID="centos"
[2025-04-18 23:15:27] ID_LIKE="rhel fedora"
[2025-04-18 23:15:27] VERSION_ID="7"
[2025-04-18 23:15:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 23:15:27] ANSI_COLOR="0;31"
[2025-04-18 23:15:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 23:15:27] HOME_URL="https://www.centos.org/"
[2025-04-18 23:15:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 23:15:27] 
[2025-04-18 23:15:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 23:15:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 23:15:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 23:15:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 23:15:27] 
[2025-04-18 23:15:27] 2025-04-19 03:15:16,364 | INFO     | **************************************
[2025-04-18 23:15:27] 2025-04-19 03:15:16,867 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 23:15:27] 2025-04-19 03:15:16,884 | INFO     | sufficient remaining disk space (29394731008 B)
[2025-04-18 23:15:27] 2025-04-19 03:15:16,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 23:15:27] 2025-04-19 03:15:16,884 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 23:15:27] 2025-04-19 03:15:16,885 | INFO     | update_server=False
[2025-04-18 23:15:27] 2025-04-19 03:15:16,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 23:15:27] 2025-04-19 03:15:16,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 23:15:27] 2025-04-19 03:15:16,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:15:27] 2025-04-19 03:15:16,886 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 23:15:27] 2025-04-19 03:15:16,886 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 23:15:27] 2025-04-19 03:15:16,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 23:15:27] 2025-04-19 03:15:16,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 23:15:27] 2025-04-19 03:15:16,897 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 23:15:27] 2025-04-19 03:15:16,897 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 23:15:27] 2025-04-19 03:15:16,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:15:27] 2025-04-19 03:15:16,897 | INFO     | will abort loop
[2025-04-18 23:15:27] 2025-04-19 03:15:17,846 | INFO     | all data control threads have been joined
[2025-04-18 23:15:27] 2025-04-19 03:15:17,890 | INFO     | [job] retrieve thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:17,891 | INFO     | [job] queue monitor thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:17,898 | INFO     | [job] job monitor thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:18,042 | INFO     | all payload control threads have been joined
[2025-04-18 23:15:27] 2025-04-19 03:15:18,143 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:18,154 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:18,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 23:15:27] 2025-04-19 03:15:18,484 | INFO     | all job control threads have been joined
[2025-04-18 23:15:27] 2025-04-19 03:15:18,641 | INFO     | [payload] failed_post thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:18,653 | INFO     | [data] copytool_in thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:18,851 | INFO     | [data] control thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:18,958 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:19,048 | INFO     | [payload] control thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:19,210 | INFO     | [job] validate thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:19,225 | INFO     | [payload] validate_post thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:19,363 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:19,489 | INFO     | [job] control thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:20,379 | INFO     | [data] copytool_out thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:20,891 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 23:15:27] 2025-04-19 03:15:22,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139853742323520)>', '<ExcThread(monitor, started 139853312284416)>']
[2025-04-18 23:15:27] 2025-04-19 03:15:22,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 23:15:27] 2025-04-19 03:15:22,917 | INFO     | [monitor] control thread has ended
[2025-04-18 23:15:27] 2025-04-19 03:15:27,236 | INFO     | all workflow threads have been joined
[2025-04-18 23:15:27] 2025-04-19 03:15:27,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 23:15:27] 2025-04-19 03:15:27,237 | INFO     | traces error code: 0
[2025-04-18 23:15:27] 2025-04-19 03:15:27,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 23:15:27] 2025-04-19 03:15:27,342 [wrapper] ==== pilot stdout END ====
[2025-04-18 23:15:27] 2025-04-19 03:15:27,346 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 23:15:27] 2025-04-19 03:15:27,350 [wrapper] pilotpid: 9798
[2025-04-18 23:15:27] 2025-04-19 03:15:27,353 [wrapper] Pilot exit status: 0
[2025-04-18 23:15:27] 2025-04-19 03:15:27,369 [wrapper] pandaids: 6606242384
[2025-04-18 23:15:27] 2025-04-19 03:15:27,408 [wrapper] cleanup supervisor_pilot 27200 9799
[2025-04-18 23:15:27] 2025-04-19 03:15:27,412 [wrapper] Test setup, not cleaning
[2025-04-18 23:15:27] 2025-04-19 03:15:27,415 [wrapper] apfmon messages muted
[2025-04-18 23:15:27] 2025-04-19 03:15:27,419 [wrapper] ==== wrapper stdout END ====
[2025-04-18 23:15:27] 2025-04-19 03:15:27,423 [wrapper] ==== wrapper stderr END ====
[2025-04-18 23:15:27]  *** Error codes and diagnostics ***
[2025-04-18 23:15:27]     "exeErrorCode": 0,
[2025-04-18 23:15:27]     "exeErrorDiag": "",
[2025-04-18 23:15:27]     "pilotErrorCode": 0,
[2025-04-18 23:15:27]     "pilotErrorDiag": "",
[2025-04-18 23:15:27]  *** Listing of results directory ***
[2025-04-18 23:15:27] total 412916
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 03:46 pilot3.tar.gz
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 04:11 queuedata.json
[2025-04-18 23:15:27] -rwx------ 1 boincer umatlas     37140 Apr 18 04:12 runpilot2-wrapper.sh
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas       100 Apr 18 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 23:15:27] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 21:50 run_atlas
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas       105 Apr 18 21:50 job.xml
[2025-04-18 23:15:27] -rw-r--r-- 2 boincer umatlas 225748423 Apr 18 21:50 EVNT.44075481._002589.pool.root.1
[2025-04-18 23:15:27] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 21:50 start_atlas.sh
[2025-04-18 23:15:27] drwxrwx--x 2 boincer umatlas      4096 Apr 18 21:50 shared
[2025-04-18 23:15:27] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 21:50 input.tar.gz
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas         0 Apr 18 21:50 boinc_lockfile
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 21:50 pandaJob.out
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas       424 Apr 18 21:50 setup.sh.local
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas    991292 Apr 18 21:51 agis_schedconf.cvmfs.json
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas   1618536 Apr 18 21:51 agis_ddmendpoints.agis.ALL.json
[2025-04-18 23:15:27] drwx------ 4 boincer umatlas      4096 Apr 18 21:51 pilot3
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas      5867 Apr 18 23:10 init_data.xml
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas 191533137 Apr 18 23:14 HITS.44075483._066612.pool.root.1
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas       529 Apr 18 23:14 boinc_task_state.xml
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas        27 Apr 18 23:14 wrapper_checkpoint.txt
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 23:14 boinc_mmap_file
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas      1050 Apr 18 23:15 memory_monitor_summary.json
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas    361994 Apr 18 23:15 log.44075483._066612.job.log.tgz.1
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas        95 Apr 18 23:15 pilot_heartbeat.json
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas      7750 Apr 18 23:15 heartbeat.json
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas      4662 Apr 18 23:15 pilotlog.txt
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas    478016 Apr 18 23:15 log.44075483._066612.job.log.1
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas       357 Apr 18 23:15 output.list
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas       620 Apr 18 23:15 runtime_log
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas    860160 Apr 18 23:15 result.tar.gz
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 23:15 runtime_log.err
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas       658 Apr 18 23:15 01NLDmA1vP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm5v4KDm3Mpzqm.diag
[2025-04-18 23:15:27] -rw-r--r-- 1 boincer umatlas     21398 Apr 18 23:15 stderr.txt
[2025-04-18 23:15:27] HITS file was successfully produced:
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas 191533137 Apr 18 23:14 shared/HITS.pool.root.1
[2025-04-18 23:15:27]  *** Contents of shared directory: ***
[2025-04-18 23:15:27] total 408868
[2025-04-18 23:15:27] -rw-r--r-- 2 boincer umatlas 225748423 Apr 18 21:50 ATLAS.root_0
[2025-04-18 23:15:27] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 21:50 start_atlas.sh
[2025-04-18 23:15:27] -rw-r--r-- 2 boincer umatlas    508891 Apr 18 21:50 input.tar.gz
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas 191533137 Apr 18 23:14 HITS.pool.root.1
[2025-04-18 23:15:27] -rw------- 1 boincer umatlas    860160 Apr 18 23:15 result.tar.gz
23:15:29 (6152): run_atlas exited; CPU time 46293.141448
23:15:29 (6152): called boinc_finish(0)

</stderr_txt>
]]>

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