Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:18:56 (22884): wrapper (7.7.26015): starting
22:18:56 (22884): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 22:18:56] Arguments: --nthreads 12
[2025-04-18 22:18:56] Threads: 12
[2025-04-18 22:18:56] Checking for CVMFS
[2025-04-18 22:18:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 22:18:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 22:18:56] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 22:18:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 22:18:56] 2.11.2.0 5876 87278 150064 145023 3 15 19082745 20275200 1 130560 0 23279496 99.970 7403789 52229 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 22:18:56] CVMFS is ok
[2025-04-18 22:18:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 22:18:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 22:18:56] Further information can be found at the LHC@home message board.
[2025-04-18 22:18:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 22:18:56] Checking for apptainer binary...
[2025-04-18 22:18:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 22:18:56] Running /usr/bin/apptainer --version
[2025-04-18 22:18:56] apptainer version 1.3.2-1.el7
[2025-04-18 22:18:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 22:18:58] c-205-31.aglt2.org
[2025-04-18 22:18:58] apptainer works
[2025-04-18 22:18:58] Set ATHENA_PROC_NUMBER=12
[2025-04-18 22:18:58] Set ATHENA_CORE_NUMBER=12
[2025-04-18 22:18:58] Starting ATLAS job with PandaID=6606874005
[2025-04-18 22:18:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 23:42:15]  *** The last 200 lines of the pilot log: ***
[2025-04-18 23:42:15]  guid=b2a00333-7c4f-444e-b7d1-3871ce6e6818
[2025-04-18 23:42:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 23:42:15]  is_altstaged=None
[2025-04-18 23:42:15]  is_tar=False
[2025-04-18 23:42:15]  lfn=log.44075483._073633.job.log.tgz.1
[2025-04-18 23:42:15]  mtime=0
[2025-04-18 23:42:15]  protocol_id=None
[2025-04-18 23:42:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 23:42:15]  replicas=None
[2025-04-18 23:42:15]  scope=mc23_13p6TeV
[2025-04-18 23:42:15]  status=None
[2025-04-18 23:42:15]  status_code=0
[2025-04-18 23:42:15]  storage_token=
[2025-04-18 23:42:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606874005/log.44075483._073633.job.log.tgz.1
[2025-04-18 23:42:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/de/log.44075483._073633.job.log.tgz.1
[2025-04-18 23:42:15]  workdir=None
[2025-04-18 23:42:15] ]
[2025-04-18 23:42:15] 2025-04-19 03:41:50,659 | INFO     | transferring file log.44075483._073633.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606874005/log.44075483._073633.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 23:42:15] 2025-04-19 03:41:50,659 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606874005/log.44075483._073633.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._073633.job
[2025-04-18 23:42:15] 2025-04-19 03:41:50,681 | INFO     | adding to output.list: log.44075483._073633.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/de/log.44075483._073633.job.log.tg
[2025-04-18 23:42:15] 2025-04-19 03:41:50,682 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 23:42:15] 2025-04-19 03:41:50,682 | INFO     | summary of transferred files:
[2025-04-18 23:42:15] 2025-04-19 03:41:50,683 | INFO     |  -- lfn=log.44075483._073633.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 23:42:15] 2025-04-19 03:41:50,683 | INFO     | stage-out finished correctly
[2025-04-18 23:42:15] 2025-04-19 03:41:53,566 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 23:42:15] 2025-04-19 03:41:54,368 | INFO     | job 6606874005 has state=finished
[2025-04-18 23:42:15] 2025-04-19 03:41:54,368 | INFO     | preparing for final server update for job 6606874005 in state='finished'
[2025-04-18 23:42:15] 2025-04-19 03:41:54,377 | INFO     | this job has now completed (state=finished)
[2025-04-18 23:42:15] 2025-04-19 03:41:54,377 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 23:42:15] 2025-04-19 03:41:54,377 | INFO     | log transfer has been attempted: DONE
[2025-04-18 23:42:15] 2025-04-19 03:41:54,377 | INFO     | job 6606874005 has finished - writing final server update
[2025-04-18 23:42:15] 2025-04-19 03:41:54,378 | INFO     | total number of processed events: 400 (read)
[2025-04-18 23:42:15] 2025-04-19 03:41:54,379 | INFO     | executing command: lscpu
[2025-04-18 23:42:15] 2025-04-19 03:41:54,408 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 23:42:15] 2025-04-19 03:41:55,254 | WARNING  | process 572 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 23:42:15] 2025-04-19 03:41:55,254 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606874005/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 23:42:15] 2025-04-19 03:41:55,341 | INFO     | number of running child processes to parent process 572: 1
[2025-04-18 23:42:15] 2025-04-19 03:41:55,341 | INFO     | maximum number of monitored processes: 6
[2025-04-18 23:42:15] 2025-04-19 03:41:57,844 | INFO     | monitor loop #371: job 0:6606874005 is in state 'finished'
[2025-04-18 23:42:15] 2025-04-19 03:41:57,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 23:42:15] 2025-04-19 03:41:59,064 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 23:42:15] 2025-04-19 03:41:59,064 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606874005/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 23:42:15] 2025-04-19 03:41:59,065 | INFO     | extracted standard info from prmon json
[2025-04-18 23:42:15] 2025-04-19 03:41:59,065 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 23:42:15] 2025-04-19 03:41:59,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 23:42:15] 2025-04-19 03:41:59,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 23:42:15] 2025-04-19 03:41:59,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 23:42:15] 2025-04-19 03:41:59,068 | INFO     | fitting pss+swap vs Time
[2025-04-18 23:42:15] 2025-04-19 03:41:59,068 | INFO     | sum of square deviations: 125630262.5
[2025-04-18 23:42:15] 2025-04-19 03:41:59,069 | INFO     | sum of deviations: 19261493773.0
[2025-04-18 23:42:15] 2025-04-19 03:41:59,069 | INFO     | mean x: 1745031712.5
[2025-04-18 23:42:15] 2025-04-19 03:41:59,070 | INFO     | mean y: 2664420.108108108
[2025-04-18 23:42:15] 2025-04-19 03:41:59,070 | INFO     | -- intersect: -267543679869.4
[2025-04-18 23:42:15] 2025-04-19 03:41:59,070 | INFO     | intersect: -267543679869.4
[2025-04-18 23:42:15] 2025-04-19 03:41:59,070 | INFO     | chi2: 2.4559312960119835
[2025-04-18 23:42:15] 2025-04-19 03:41:59,070 | INFO     | -- intersect: -267543679869.4
[2025-04-18 23:42:15] 2025-04-19 03:41:59,071 | INFO     | current memory leak: 153.32 B/s (using 74 data points, chi2=2.46)
[2025-04-18 23:42:15] 2025-04-19 03:41:59,071 | INFO     | ..............................
[2025-04-18 23:42:15] 2025-04-19 03:41:59,071 | INFO     | . Timing measurements:
[2025-04-18 23:42:15] 2025-04-19 03:41:59,071 | INFO     | . get job = 0 s
[2025-04-18 23:42:15] 2025-04-19 03:41:59,072 | INFO     | . initial setup = 2 s
[2025-04-18 23:42:15] 2025-04-19 03:41:59,072 | INFO     | . payload setup = 7 s
[2025-04-18 23:42:15] 2025-04-19 03:41:59,072 | INFO     | . stage-in = 0 s
[2025-04-18 23:42:15] 2025-04-19 03:41:59,072 | INFO     | . payload execution = 4930 s
[2025-04-18 23:42:15] 2025-04-19 03:41:59,072 | INFO     | . stage-out = 0 s
[2025-04-18 23:42:15] 2025-04-19 03:41:59,073 | INFO     | . log creation = 0 s
[2025-04-18 23:42:15] 2025-04-19 03:41:59,073 | INFO     | ..............................
[2025-04-18 23:42:15] 2025-04-19 03:41:59,159 | INFO     | 
[2025-04-18 23:42:15] 2025-04-19 03:41:59,159 | INFO     | job summary report
[2025-04-18 23:42:15] 2025-04-19 03:41:59,160 | INFO     | --------------------------------------------------
[2025-04-18 23:42:15] 2025-04-19 03:41:59,160 | INFO     | PanDA job id: 6606874005
[2025-04-18 23:42:15] 2025-04-19 03:41:59,160 | INFO     | task id: 44075483
[2025-04-18 23:42:15] 2025-04-19 03:41:59,160 | INFO     | errors: (none)
[2025-04-18 23:42:15] 2025-04-19 03:41:59,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 23:42:15] 2025-04-19 03:41:59,160 | INFO     | pilot state: finished 
[2025-04-18 23:42:15] 2025-04-19 03:41:59,161 | INFO     | transexitcode: 0
[2025-04-18 23:42:15] 2025-04-19 03:41:59,161 | INFO     | exeerrorcode: 0
[2025-04-18 23:42:15] 2025-04-19 03:41:59,161 | INFO     | exeerrordiag: 
[2025-04-18 23:42:15] 2025-04-19 03:41:59,161 | INFO     | exitcode: 0
[2025-04-18 23:42:15] 2025-04-19 03:41:59,162 | INFO     | exitmsg: OK
[2025-04-18 23:42:15] 2025-04-19 03:41:59,162 | INFO     | cpuconsumptiontime: 46896 s
[2025-04-18 23:42:15] 2025-04-19 03:41:59,162 | INFO     | nevents: 400
[2025-04-18 23:42:15] 2025-04-19 03:41:59,162 | INFO     | neventsw: 0
[2025-04-18 23:42:15] 2025-04-19 03:41:59,163 | INFO     | pid: 572
[2025-04-18 23:42:15] 2025-04-19 03:41:59,163 | INFO     | pgrp: 572
[2025-04-18 23:42:15] 2025-04-19 03:41:59,163 | INFO     | corecount: 12
[2025-04-18 23:42:15] 2025-04-19 03:41:59,163 | INFO     | event service: False
[2025-04-18 23:42:15] 2025-04-19 03:41:59,163 | INFO     | sizes: {0: 2426773, 5: 2426979, 11: 2427035, 4941: 2453133, 4942: 2453132, 4943: 2462129, 4946: 2462313, 4951: 2462483}
[2025-04-18 23:42:15] 2025-04-19 03:41:59,164 | INFO     | --------------------------------------------------
[2025-04-18 23:42:15] 2025-04-19 03:41:59,164 | INFO     | 
[2025-04-18 23:42:15] 2025-04-19 03:41:59,164 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 23:42:15] 2025-04-19 03:41:59,189 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,190 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,191 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,191 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,191 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,191 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,192 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 23:42:15] 2025-04-19 03:41:59,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,193 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 23:42:15] 2025-04-19 03:41:59,193 | INFO     | job 6606874005 has completed (purged errors)
[2025-04-18 23:42:15] 2025-04-19 03:41:59,193 | INFO     | overall cleanup function is called
[2025-04-18 23:42:15] 2025-04-19 03:41:59,242 | INFO     | PID=26654 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 23:42:15] 2025-04-19 03:42:00,199 | INFO     | --- collectZombieJob: --- 10, [572]
[2025-04-18 23:42:15] 2025-04-19 03:42:00,199 | INFO     | zombie collector waiting for pid 572
[2025-04-18 23:42:15] 2025-04-19 03:42:00,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 23:42:15] 2025-04-19 03:42:00,199 | INFO     | collected zombie processes
[2025-04-18 23:42:15] 2025-04-19 03:42:00,199 | INFO     | will attempt to kill all subprocesses of pid=572
[2025-04-18 23:42:15] 2025-04-19 03:42:00,289 | INFO     | process IDs to be killed: [572] (in reverse order)
[2025-04-18 23:42:15] 2025-04-19 03:42:00,340 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 23:42:15] 2025-04-19 03:42:00,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 23:42:15] 2025-04-19 03:42:00,344 | INFO     | did not find any defunct processes belonging to 572
[2025-04-18 23:42:15] 2025-04-19 03:42:00,348 | INFO     | did not find any defunct processes belonging to 572
[2025-04-18 23:42:15] 2025-04-19 03:42:00,348 | INFO     | ready for new job
[2025-04-18 23:42:15] 2025-04-19 03:42:00,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 23:42:15] 2025-04-19 03:42:00,349 | INFO     | **************************************
[2025-04-18 23:42:15] 2025-04-19 03:42:00,350 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 23:42:15] 2025-04-19 03:42:00,350 | INFO     | **************************************
[2025-04-18 23:42:15] 2025-04-19 03:42:00,350 | INFO     | 
[2025-04-18 23:42:15] 2025-04-19 03:42:00,350 | INFO     | architecture information:
[2025-04-18 23:42:15] 2025-04-19 03:42:00,351 | INFO     | executing command: cat /etc/os-release
[2025-04-18 23:42:15] 2025-04-19 03:42:00,366 | INFO     | cat /etc/os-release:
[2025-04-18 23:42:15] NAME="CentOS Linux"
[2025-04-18 23:42:15] VERSION="7 (Core)"
[2025-04-18 23:42:15] ID="centos"
[2025-04-18 23:42:15] ID_LIKE="rhel fedora"
[2025-04-18 23:42:15] VERSION_ID="7"
[2025-04-18 23:42:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 23:42:15] ANSI_COLOR="0;31"
[2025-04-18 23:42:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 23:42:15] HOME_URL="https://www.centos.org/"
[2025-04-18 23:42:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 23:42:15] 
[2025-04-18 23:42:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 23:42:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 23:42:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 23:42:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 23:42:15] 
[2025-04-18 23:42:15] 2025-04-19 03:42:00,366 | INFO     | **************************************
[2025-04-18 23:42:15] 2025-04-19 03:42:00,869 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 23:42:15] 2025-04-19 03:42:00,887 | INFO     | sufficient remaining disk space (29398925312 B)
[2025-04-18 23:42:15] 2025-04-19 03:42:00,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 23:42:15] 2025-04-19 03:42:00,888 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 23:42:15] 2025-04-19 03:42:00,888 | INFO     | update_server=False
[2025-04-18 23:42:15] 2025-04-19 03:42:00,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 23:42:15] 2025-04-19 03:42:00,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:42:15] 2025-04-19 03:42:01,248 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 23:42:15] 2025-04-19 03:42:01,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 23:42:15] 2025-04-19 03:42:01,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 23:42:15] 2025-04-19 03:42:01,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 23:42:15] 2025-04-19 03:42:01,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:42:15] 2025-04-19 03:42:01,352 | INFO     | aborting loop
[2025-04-18 23:42:15] 2025-04-19 03:42:01,557 | INFO     | all data control threads have been joined
[2025-04-18 23:42:15] 2025-04-19 03:42:01,889 | INFO     | [job] retrieve thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:01,894 | INFO     | [job] queue monitor thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:01,958 | INFO     | [payload] failed_post thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:02,071 | INFO     | all payload control threads have been joined
[2025-04-18 23:42:15] 2025-04-19 03:42:02,191 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:02,323 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:02,353 | INFO     | [job] job monitor thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:02,376 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:02,483 | INFO     | [data] copytool_in thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:02,560 | INFO     | [data] control thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:02,574 | INFO     | all job control threads have been joined
[2025-04-18 23:42:15] 2025-04-19 03:42:02,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:02,931 | INFO     | [job] validate thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:03,077 | INFO     | [payload] control thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:03,266 | INFO     | [payload] validate_post thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:03,289 | INFO     | [data] copytool_out thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:03,580 | INFO     | [job] control thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:04,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 23:42:15] 2025-04-19 03:42:08,168 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 23:42:15] 2025-04-19 03:42:10,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140184362506048)>', '<ExcThread(monitor, started 140184066696960)>']
[2025-04-18 23:42:15] 2025-04-19 03:42:10,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 23:42:15] 2025-04-19 03:42:10,280 | INFO     | [monitor] control thread has ended
[2025-04-18 23:42:15] 2025-04-19 03:42:15,151 | INFO     | all workflow threads have been joined
[2025-04-18 23:42:15] 2025-04-19 03:42:15,151 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 23:42:15] 2025-04-19 03:42:15,154 | INFO     | traces error code: 0
[2025-04-18 23:42:15] 2025-04-19 03:42:15,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 23:42:15] 2025-04-19 03:42:15,247 [wrapper] ==== pilot stdout END ====
[2025-04-18 23:42:15] 2025-04-19 03:42:15,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 23:42:15] 2025-04-19 03:42:15,255 [wrapper] pilotpid: 26654
[2025-04-18 23:42:15] 2025-04-19 03:42:15,259 [wrapper] Pilot exit status: 0
[2025-04-18 23:42:15] 2025-04-19 03:42:15,275 [wrapper] pandaids: 6606874005
[2025-04-18 23:42:15] 2025-04-19 03:42:15,314 [wrapper] cleanup supervisor_pilot 21818 26655
[2025-04-18 23:42:15] 2025-04-19 03:42:15,317 [wrapper] Test setup, not cleaning
[2025-04-18 23:42:15] 2025-04-19 03:42:15,322 [wrapper] apfmon messages muted
[2025-04-18 23:42:15] 2025-04-19 03:42:15,325 [wrapper] ==== wrapper stdout END ====
[2025-04-18 23:42:15] 2025-04-19 03:42:15,329 [wrapper] ==== wrapper stderr END ====
[2025-04-18 23:42:15]  *** Error codes and diagnostics ***
[2025-04-18 23:42:15]     "exeErrorCode": 0,
[2025-04-18 23:42:15]     "exeErrorDiag": "",
[2025-04-18 23:42:15]     "pilotErrorCode": 0,
[2025-04-18 23:42:15]     "pilotErrorDiag": "",
[2025-04-18 23:42:15]  *** Listing of results directory ***
[2025-04-18 23:42:15] total 412952
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 16:04 pilot3.tar.gz
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 16:20 queuedata.json
[2025-04-18 23:42:15] -rwx------ 1 boincer umatlas     37140 Apr 18 16:21 runpilot2-wrapper.sh
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas       100 Apr 18 22:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 23:42:15] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 22:18 run_atlas
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas       105 Apr 18 22:18 job.xml
[2025-04-18 23:42:15] -rw-r--r-- 2 boincer umatlas 224272695 Apr 18 22:18 EVNT.44075481._001130.pool.root.1
[2025-04-18 23:42:15] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 22:18 start_atlas.sh
[2025-04-18 23:42:15] drwxrwx--x 2 boincer umatlas      4096 Apr 18 22:18 shared
[2025-04-18 23:42:15] -rw-r--r-- 2 boincer umatlas    508896 Apr 18 22:18 input.tar.gz
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas         0 Apr 18 22:18 boinc_lockfile
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 22:18 pandaJob.out
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas       424 Apr 18 22:18 setup.sh.local
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas    991292 Apr 18 22:19 agis_schedconf.cvmfs.json
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas   1618536 Apr 18 22:19 agis_ddmendpoints.agis.ALL.json
[2025-04-18 23:42:15] drwx------ 4 boincer umatlas      4096 Apr 18 22:19 pilot3
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 23:37 init_data.xml
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas        95 Apr 18 23:41 pilot_heartbeat.json
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas 193064077 Apr 18 23:41 HITS.44075483._073633.pool.root.1
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas       530 Apr 18 23:41 boinc_task_state.xml
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas      1050 Apr 18 23:41 memory_monitor_summary.json
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas    357744 Apr 18 23:41 log.44075483._073633.job.log.tgz.1
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas      7756 Apr 18 23:41 heartbeat.json
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 23:42 boinc_mmap_file
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas        27 Apr 18 23:42 wrapper_checkpoint.txt
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas      4353 Apr 18 23:42 pilotlog.txt
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas    470255 Apr 18 23:42 log.44075483._073633.job.log.1
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas       357 Apr 18 23:42 output.list
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas       620 Apr 18 23:42 runtime_log
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas    849920 Apr 18 23:42 result.tar.gz
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas       658 Apr 18 23:42 u5ALDm7N7P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm55fLDmxJN0Mn.diag
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 23:42 runtime_log.err
[2025-04-18 23:42:15] -rw-r--r-- 1 boincer umatlas     21368 Apr 18 23:42 stderr.txt
[2025-04-18 23:42:15] HITS file was successfully produced:
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas 193064077 Apr 18 23:41 shared/HITS.pool.root.1
[2025-04-18 23:42:15]  *** Contents of shared directory: ***
[2025-04-18 23:42:15] total 408916
[2025-04-18 23:42:15] -rw-r--r-- 2 boincer umatlas 224272695 Apr 18 22:18 ATLAS.root_0
[2025-04-18 23:42:15] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 22:18 start_atlas.sh
[2025-04-18 23:42:15] -rw-r--r-- 2 boincer umatlas    508896 Apr 18 22:18 input.tar.gz
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas 193064077 Apr 18 23:41 HITS.pool.root.1
[2025-04-18 23:42:15] -rw------- 1 boincer umatlas    849920 Apr 18 23:42 result.tar.gz
23:42:16 (22884): run_atlas exited; CPU time 46877.648662
23:42:16 (22884): called boinc_finish(0)

</stderr_txt>
]]>

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