Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:46:02 (24666): wrapper (7.7.26015): starting
21:46:02 (24666): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 21:46:02] Arguments: --nthreads 8
[2025-04-18 21:46:02] Threads: 8
[2025-04-18 21:46:02] Checking for CVMFS
[2025-04-18 21:46:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 21:46:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 21:46:02] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 21:46:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 21:46:03] 2.11.2.0 3213 373736 243944 145021 1 70 10410855 20275201 917 130560 0 56061418 99.987 7770717 64863 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 21:46:03] CVMFS is ok
[2025-04-18 21:46:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 21:46:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 21:46:03] Further information can be found at the LHC@home message board.
[2025-04-18 21:46:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 21:46:03] Checking for apptainer binary...
[2025-04-18 21:46:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 21:46:03] Running /usr/bin/apptainer --version
[2025-04-18 21:46:03] apptainer version 1.3.2-1.el7
[2025-04-18 21:46:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 21:46:03] c-205-38.aglt2.org
[2025-04-18 21:46:03] apptainer works
[2025-04-18 21:46:03] Set ATHENA_PROC_NUMBER=8
[2025-04-18 21:46:03] Set ATHENA_CORE_NUMBER=8
[2025-04-18 21:46:03] Starting ATLAS job with PandaID=6606995081
[2025-04-18 21:46:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 22:51:49]  *** The last 200 lines of the pilot log: ***
[2025-04-18 22:51:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 22:51:49]  is_altstaged=None
[2025-04-18 22:51:49]  is_tar=False
[2025-04-18 22:51:49]  lfn=log.44075483._074514.job.log.tgz.1
[2025-04-18 22:51:49]  mtime=0
[2025-04-18 22:51:49]  protocol_id=None
[2025-04-18 22:51:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 22:51:49]  replicas=None
[2025-04-18 22:51:49]  scope=mc23_13p6TeV
[2025-04-18 22:51:49]  status=None
[2025-04-18 22:51:49]  status_code=0
[2025-04-18 22:51:49]  storage_token=
[2025-04-18 22:51:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606995081/log.44075483._074514.job.log.tgz.1
[2025-04-18 22:51:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/01/log.44075483._074514.job.log.tgz.1
[2025-04-18 22:51:49]  workdir=None
[2025-04-18 22:51:49] ]
[2025-04-18 22:51:49] 2025-04-19 02:51:29,562 | INFO     | transferring file log.44075483._074514.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606995081/log.44075483._074514.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 22:51:49] 2025-04-19 02:51:29,562 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606995081/log.44075483._074514.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._074514.job
[2025-04-18 22:51:49] 2025-04-19 02:51:29,580 | INFO     | adding to output.list: log.44075483._074514.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/01/log.44075483._074514.job.log.tg
[2025-04-18 22:51:49] 2025-04-19 02:51:29,582 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 22:51:49] 2025-04-19 02:51:29,582 | INFO     | summary of transferred files:
[2025-04-18 22:51:49] 2025-04-19 02:51:29,582 | INFO     |  -- lfn=log.44075483._074514.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 22:51:49] 2025-04-19 02:51:29,582 | INFO     | stage-out finished correctly
[2025-04-18 22:51:49] 2025-04-19 02:51:31,892 | INFO     | monitor loop #298: job 0:6606995081 is in state 'finished'
[2025-04-18 22:51:49] 2025-04-19 02:51:31,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 22:51:49] 2025-04-19 02:51:32,354 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 22:51:49] 2025-04-19 02:51:32,439 | INFO     | job 6606995081 has state=finished
[2025-04-18 22:51:49] 2025-04-19 02:51:32,440 | INFO     | preparing for final server update for job 6606995081 in state='finished'
[2025-04-18 22:51:49] 2025-04-19 02:51:32,440 | INFO     | this job has now completed (state=finished)
[2025-04-18 22:51:49] 2025-04-19 02:51:32,441 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 22:51:49] 2025-04-19 02:51:32,441 | INFO     | log transfer has been attempted: DONE
[2025-04-18 22:51:49] 2025-04-19 02:51:32,441 | INFO     | job 6606995081 has finished - writing final server update
[2025-04-18 22:51:49] 2025-04-19 02:51:32,441 | INFO     | total number of processed events: 400 (read)
[2025-04-18 22:51:49] 2025-04-19 02:51:32,443 | INFO     | executing command: lscpu
[2025-04-18 22:51:49] 2025-04-19 02:51:32,474 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 22:51:49] 2025-04-19 02:51:34,395 | INFO     | monitor loop #299: job 0:6606995081 is in state 'finished'
[2025-04-18 22:51:49] 2025-04-19 02:51:34,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 22:51:49] 2025-04-19 02:51:34,648 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 22:51:49] 2025-04-19 02:51:34,648 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606995081/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 22:51:49] 2025-04-19 02:51:34,649 | INFO     | extracted standard info from prmon json
[2025-04-18 22:51:49] 2025-04-19 02:51:34,649 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 22:51:49] 2025-04-19 02:51:34,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 22:51:49] 2025-04-19 02:51:34,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 22:51:49] 2025-04-19 02:51:34,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 22:51:49] 2025-04-19 02:51:34,650 | INFO     | fitting pss+swap vs Time
[2025-04-18 22:51:49] 2025-04-19 02:51:34,651 | INFO     | sum of square deviations: 57407588.0
[2025-04-18 22:51:49] 2025-04-19 02:51:34,651 | INFO     | sum of deviations: 12544660553.0
[2025-04-18 22:51:49] 2025-04-19 02:51:34,651 | INFO     | mean x: 1745029204.0
[2025-04-18 22:51:49] 2025-04-19 02:51:34,651 | INFO     | mean y: 2387020.2807017546
[2025-04-18 22:51:49] 2025-04-19 02:51:34,651 | INFO     | -- intersect: -381320009232.48975
[2025-04-18 22:51:49] 2025-04-19 02:51:34,651 | INFO     | intersect: -381320009232.48975
[2025-04-18 22:51:49] 2025-04-19 02:51:34,651 | INFO     | chi2: 1.4458492660873923
[2025-04-18 22:51:49] 2025-04-19 02:51:34,651 | INFO     | -- intersect: -381320009232.48975
[2025-04-18 22:51:49] 2025-04-19 02:51:34,651 | INFO     | current memory leak: 218.52 B/s (using 57 data points, chi2=1.45)
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | ..............................
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | . Timing measurements:
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | . get job = 0 s
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | . initial setup = 2 s
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | . payload setup = 3 s
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | . stage-in = 0 s
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | . payload execution = 3898 s
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | . stage-out = 0 s
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | . log creation = 0 s
[2025-04-18 22:51:49] 2025-04-19 02:51:34,652 | INFO     | ..............................
[2025-04-18 22:51:49] 2025-04-19 02:51:34,712 | INFO     | 
[2025-04-18 22:51:49] 2025-04-19 02:51:34,712 | INFO     | job summary report
[2025-04-18 22:51:49] 2025-04-19 02:51:34,712 | INFO     | --------------------------------------------------
[2025-04-18 22:51:49] 2025-04-19 02:51:34,712 | INFO     | PanDA job id: 6606995081
[2025-04-18 22:51:49] 2025-04-19 02:51:34,712 | INFO     | task id: 44075483
[2025-04-18 22:51:49] 2025-04-19 02:51:34,713 | INFO     | errors: (none)
[2025-04-18 22:51:49] 2025-04-19 02:51:34,713 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 22:51:49] 2025-04-19 02:51:34,713 | INFO     | pilot state: finished 
[2025-04-18 22:51:49] 2025-04-19 02:51:34,713 | INFO     | transexitcode: 0
[2025-04-18 22:51:49] 2025-04-19 02:51:34,713 | INFO     | exeerrorcode: 0
[2025-04-18 22:51:49] 2025-04-19 02:51:34,713 | INFO     | exeerrordiag: 
[2025-04-18 22:51:49] 2025-04-19 02:51:34,713 | INFO     | exitcode: 0
[2025-04-18 22:51:49] 2025-04-19 02:51:34,713 | INFO     | exitmsg: OK
[2025-04-18 22:51:49] 2025-04-19 02:51:34,713 | INFO     | cpuconsumptiontime: 24407 s
[2025-04-18 22:51:49] 2025-04-19 02:51:34,714 | INFO     | nevents: 400
[2025-04-18 22:51:49] 2025-04-19 02:51:34,714 | INFO     | neventsw: 0
[2025-04-18 22:51:49] 2025-04-19 02:51:34,714 | INFO     | pid: 2413
[2025-04-18 22:51:49] 2025-04-19 02:51:34,714 | INFO     | pgrp: 2413
[2025-04-18 22:51:49] 2025-04-19 02:51:34,714 | INFO     | corecount: 8
[2025-04-18 22:51:49] 2025-04-19 02:51:34,714 | INFO     | event service: False
[2025-04-18 22:51:49] 2025-04-19 02:51:34,714 | INFO     | sizes: {0: 2426603, 1: 2426802, 3: 2427008, 11: 2427036, 3904: 2452886, 3905: 2461827, 3908: 2462011, 3910: 2462181}
[2025-04-18 22:51:49] 2025-04-19 02:51:34,714 | INFO     | --------------------------------------------------
[2025-04-18 22:51:49] 2025-04-19 02:51:34,714 | INFO     | 
[2025-04-18 22:51:49] 2025-04-19 02:51:34,715 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 22:51:49] 2025-04-19 02:51:34,735 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,735 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,736 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,736 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,736 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,737 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 22:51:49] 2025-04-19 02:51:34,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,737 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 22:51:49] 2025-04-19 02:51:34,738 | INFO     | job 6606995081 has completed (purged errors)
[2025-04-18 22:51:49] 2025-04-19 02:51:34,738 | INFO     | overall cleanup function is called
[2025-04-18 22:51:49] 2025-04-19 02:51:35,224 | INFO     | PID=28279 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 22:51:49] 2025-04-19 02:51:35,224 | INFO     | .. there are 2 such processes running
[2025-04-18 22:51:49] 2025-04-19 02:51:35,742 | INFO     | --- collectZombieJob: --- 10, [2413]
[2025-04-18 22:51:49] 2025-04-19 02:51:35,742 | INFO     | zombie collector waiting for pid 2413
[2025-04-18 22:51:49] 2025-04-19 02:51:35,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 22:51:49] 2025-04-19 02:51:35,743 | INFO     | collected zombie processes
[2025-04-18 22:51:49] 2025-04-19 02:51:35,743 | INFO     | will attempt to kill all subprocesses of pid=2413
[2025-04-18 22:51:49] 2025-04-19 02:51:35,845 | INFO     | process IDs to be killed: [2413] (in reverse order)
[2025-04-18 22:51:49] 2025-04-19 02:51:35,891 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 22:51:49] 2025-04-19 02:51:35,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 22:51:49] 2025-04-19 02:51:35,894 | INFO     | did not find any defunct processes belonging to 2413
[2025-04-18 22:51:49] 2025-04-19 02:51:35,895 | INFO     | did not find any defunct processes belonging to 2413
[2025-04-18 22:51:49] 2025-04-19 02:51:35,896 | INFO     | ready for new job
[2025-04-18 22:51:49] 2025-04-19 02:51:35,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 22:51:49] 2025-04-19 02:51:35,897 | INFO     | **************************************
[2025-04-18 22:51:49] 2025-04-19 02:51:35,897 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 22:51:49] 2025-04-19 02:51:35,897 | INFO     | **************************************
[2025-04-18 22:51:49] 2025-04-19 02:51:35,897 | INFO     | 
[2025-04-18 22:51:49] 2025-04-19 02:51:35,898 | INFO     | architecture information:
[2025-04-18 22:51:49] 2025-04-19 02:51:35,898 | INFO     | executing command: cat /etc/os-release
[2025-04-18 22:51:49] 2025-04-19 02:51:35,911 | INFO     | cat /etc/os-release:
[2025-04-18 22:51:49] NAME="CentOS Linux"
[2025-04-18 22:51:49] VERSION="7 (Core)"
[2025-04-18 22:51:49] ID="centos"
[2025-04-18 22:51:49] ID_LIKE="rhel fedora"
[2025-04-18 22:51:49] VERSION_ID="7"
[2025-04-18 22:51:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 22:51:49] ANSI_COLOR="0;31"
[2025-04-18 22:51:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 22:51:49] HOME_URL="https://www.centos.org/"
[2025-04-18 22:51:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 22:51:49] 
[2025-04-18 22:51:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 22:51:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 22:51:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 22:51:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 22:51:49] 
[2025-04-18 22:51:49] 2025-04-19 02:51:35,912 | INFO     | **************************************
[2025-04-18 22:51:49] 2025-04-19 02:51:36,415 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 22:51:49] 2025-04-19 02:51:36,432 | INFO     | sufficient remaining disk space (32766951424 B)
[2025-04-18 22:51:49] 2025-04-19 02:51:36,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 22:51:49] 2025-04-19 02:51:36,433 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 22:51:49] 2025-04-19 02:51:36,433 | INFO     | update_server=False
[2025-04-18 22:51:49] 2025-04-19 02:51:36,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 22:51:49] 2025-04-19 02:51:36,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 22:51:49] 2025-04-19 02:51:36,552 | INFO     | all payload control threads have been joined
[2025-04-18 22:51:49] 2025-04-19 02:51:36,899 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 22:51:49] 2025-04-19 02:51:36,899 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 22:51:49] 2025-04-19 02:51:36,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 22:51:49] 2025-04-19 02:51:36,900 | INFO     | will abort loop
[2025-04-18 22:51:49] 2025-04-19 02:51:36,922 | INFO     | all job control threads have been joined
[2025-04-18 22:51:49] 2025-04-19 02:51:37,229 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 22:51:49] 2025-04-19 02:51:37,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 22:51:49] 2025-04-19 02:51:37,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 22:51:49] 2025-04-19 02:51:37,287 | INFO     | all data control threads have been joined
[2025-04-18 22:51:49] 2025-04-19 02:51:37,438 | INFO     | [job] queue monitor thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:37,439 | INFO     | [job] retrieve thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:37,501 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:37,557 | INFO     | [payload] control thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:37,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 22:51:49] 2025-04-19 02:51:37,809 | INFO     | [payload] validate_post thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:37,900 | INFO     | [job] job monitor thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:37,927 | INFO     | [job] control thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:37,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:38,290 | INFO     | [data] control thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:38,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 22:51:49] 2025-04-19 02:51:38,489 | INFO     | [payload] failed_post thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:38,493 | INFO     | [data] copytool_in thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:38,679 | INFO     | [job] validate thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:38,729 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:38,858 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:39,688 | INFO     | [data] copytool_out thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:42,450 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 22:51:49] 2025-04-19 02:51:43,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460079425344)>', '<ExcThread(monitor, started 140459523438336)>']
[2025-04-18 22:51:49] 2025-04-19 02:51:44,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 22:51:49] 2025-04-19 02:51:44,266 | INFO     | [monitor] control thread has ended
[2025-04-18 22:51:49] 2025-04-19 02:51:48,874 | INFO     | all workflow threads have been joined
[2025-04-18 22:51:49] 2025-04-19 02:51:48,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 22:51:49] 2025-04-19 02:51:48,874 | INFO     | traces error code: 0
[2025-04-18 22:51:49] 2025-04-19 02:51:48,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 22:51:49] 2025-04-19 02:51:48,962 [wrapper] ==== pilot stdout END ====
[2025-04-18 22:51:49] 2025-04-19 02:51:48,965 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 22:51:49] 2025-04-19 02:51:48,967 [wrapper] pilotpid: 28279
[2025-04-18 22:51:49] 2025-04-19 02:51:48,970 [wrapper] Pilot exit status: 0
[2025-04-18 22:51:49] 2025-04-19 02:51:48,978 [wrapper] pandaids: 6606995081
[2025-04-18 22:51:49] 2025-04-19 02:51:49,008 [wrapper] cleanup supervisor_pilot 11589 28280
[2025-04-18 22:51:49] 2025-04-19 02:51:49,010 [wrapper] Test setup, not cleaning
[2025-04-18 22:51:49] 2025-04-19 02:51:49,012 [wrapper] apfmon messages muted
[2025-04-18 22:51:49] 2025-04-19 02:51:49,014 [wrapper] ==== wrapper stdout END ====
[2025-04-18 22:51:49] 2025-04-19 02:51:49,016 [wrapper] ==== wrapper stderr END ====
[2025-04-18 22:51:49]  *** Error codes and diagnostics ***
[2025-04-18 22:51:49]     "exeErrorCode": 0,
[2025-04-18 22:51:49]     "exeErrorDiag": "",
[2025-04-18 22:51:49]     "pilotErrorCode": 0,
[2025-04-18 22:51:49]     "pilotErrorDiag": "",
[2025-04-18 22:51:49]  *** Listing of results directory ***
[2025-04-18 22:51:49] total 419112
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 19:06 pilot3.tar.gz
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 19:12 queuedata.json
[2025-04-18 22:51:49] -rwx------ 1 boincer umatlas     37140 Apr 18 19:12 runpilot2-wrapper.sh
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas       100 Apr 18 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 22:51:49] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 21:46 run_atlas
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas       105 Apr 18 21:46 job.xml
[2025-04-18 22:51:49] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 21:46 input.tar.gz
[2025-04-18 22:51:49] -rw-r--r-- 2 boincer umatlas 223876908 Apr 18 21:46 EVNT.44075481._001826.pool.root.1
[2025-04-18 22:51:49] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 21:46 start_atlas.sh
[2025-04-18 22:51:49] drwxrwx--x 2 boincer umatlas      4096 Apr 18 21:46 shared
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas         0 Apr 18 21:46 boinc_lockfile
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 21:46 pandaJob.out
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas       424 Apr 18 21:46 setup.sh.local
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas    991292 Apr 18 21:46 agis_schedconf.cvmfs.json
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas   1618536 Apr 18 21:46 agis_ddmendpoints.agis.ALL.json
[2025-04-18 22:51:49] drwx------ 4 boincer umatlas      4096 Apr 18 21:46 pilot3
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas      6050 Apr 18 22:47 init_data.xml
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas        95 Apr 18 22:50 pilot_heartbeat.json
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas 200035854 Apr 18 22:51 HITS.44075483._074514.pool.root.1
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas       530 Apr 18 22:51 boinc_task_state.xml
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas      1045 Apr 18 22:51 memory_monitor_summary.json
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas    292794 Apr 18 22:51 log.44075483._074514.job.log.tgz.1
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas      7736 Apr 18 22:51 heartbeat.json
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 22:51 boinc_mmap_file
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas        27 Apr 18 22:51 wrapper_checkpoint.txt
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas      4539 Apr 18 22:51 pilotlog.txt
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas    401410 Apr 18 22:51 log.44075483._074514.job.log.1
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas       357 Apr 18 22:51 output.list
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas       620 Apr 18 22:51 runtime_log
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas    716800 Apr 18 22:51 result.tar.gz
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas     11013 Apr 18 22:51 runtime_log.err
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas       656 Apr 18 22:51 KOvLDmj39P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOMgLDmgzOwNo.diag
[2025-04-18 22:51:49] -rw-r--r-- 1 boincer umatlas     21389 Apr 18 22:51 stderr.txt
[2025-04-18 22:51:49] HITS file was successfully produced:
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas 200035854 Apr 18 22:51 shared/HITS.pool.root.1
[2025-04-18 22:51:49]  *** Contents of shared directory: ***
[2025-04-18 22:51:49] total 415204
[2025-04-18 22:51:49] -rw-r--r-- 2 boincer umatlas    508894 Apr 18 21:46 input.tar.gz
[2025-04-18 22:51:49] -rw-r--r-- 2 boincer umatlas 223876908 Apr 18 21:46 ATLAS.root_0
[2025-04-18 22:51:49] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 21:46 start_atlas.sh
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas 200035854 Apr 18 22:51 HITS.pool.root.1
[2025-04-18 22:51:49] -rw------- 1 boincer umatlas    716800 Apr 18 22:51 result.tar.gz
22:51:51 (24666): run_atlas exited; CPU time 24367.880183
22:51:51 (24666): called boinc_finish(0)

</stderr_txt>
]]>

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