Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
16:59:52 (176273): wrapper (7.7.26015): starting
16:59:52 (176273): wrapper: running run_atlas (--nthreads 5)
[2025-04-19 16:59:52] Arguments: --nthreads 5
[2025-04-19 16:59:52] Threads: 5
[2025-04-19 16:59:52] Checking for CVMFS
[2025-04-19 16:59:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 16:59:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 16:59:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 16:59:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 16:59:53] 2.12.7.0 3239 635 47020 145029 2 56 2745784 4096000 0 130560 0 426065 99.986 227483 3142 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-19 16:59:53] CVMFS is ok
[2025-04-19 16:59:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 16:59:53] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-19 16:59:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-19 16:59:53] Further information can be found at the LHC@home message board.
[2025-04-19 16:59:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 16:59:53] Checking for apptainer binary...
[2025-04-19 16:59:53] apptainer is not installed, using version from CVMFS
[2025-04-19 16:59:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 16:59:53] BoincUbuntu
[2025-04-19 16:59:53] apptainer works
[2025-04-19 16:59:53] Set ATHENA_PROC_NUMBER=5
[2025-04-19 16:59:53] Set ATHENA_CORE_NUMBER=5
[2025-04-19 16:59:53] Starting ATLAS job with PandaID=6605179583
[2025-04-19 16:59:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 18:30:30]  *** The last 200 lines of the pilot log: ***
[2025-04-19 18:30:30]  status_code=0
[2025-04-19 18:30:30]  storage_token=
[2025-04-19 18:30:30]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6605179583/log.44075483._052936.job.log.tgz.1
[2025-04-19 18:30:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/7e/log.44075483._052936.job.log.tgz.1
[2025-04-19 18:30:30]  workdir=None
[2025-04-19 18:30:30] ]
[2025-04-19 18:30:30] 2025-04-19 08:29:51,613 | INFO     | transferring file log.44075483._052936.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6605179583/log.44075483._052936.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-19 18:30:30] 2025-04-19 08:29:51,613 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6605179583/log.44075483._052936.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._052936.job
[2025-04-19 18:30:30] 2025-04-19 08:29:51,646 | INFO     | adding to output.list: log.44075483._052936.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/7e/log.44075483._052936.job.log.tg
[2025-04-19 18:30:30] 2025-04-19 08:29:51,647 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 18:30:30] 2025-04-19 08:29:51,647 | INFO     | summary of transferred files:
[2025-04-19 18:30:30] 2025-04-19 08:29:51,647 | INFO     |  -- lfn=log.44075483._052936.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 18:30:30] 2025-04-19 08:29:51,647 | INFO     | stage-out finished correctly
[2025-04-19 18:30:30] 2025-04-19 08:29:51,715 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 18:30:30] 2025-04-19 08:29:51,765 | INFO     | job 6605179583 has state=finished
[2025-04-19 18:30:30] 2025-04-19 08:29:51,765 | INFO     | preparing for final server update for job 6605179583 in state='finished'
[2025-04-19 18:30:30] 2025-04-19 08:29:51,765 | INFO     | this job has now completed (state=finished)
[2025-04-19 18:30:30] 2025-04-19 08:29:51,765 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 18:30:30] 2025-04-19 08:29:51,766 | INFO     | log transfer has been attempted: DONE
[2025-04-19 18:30:30] 2025-04-19 08:29:51,766 | INFO     | job 6605179583 has finished - writing final server update
[2025-04-19 18:30:30] 2025-04-19 08:29:51,767 | INFO     | total number of processed events: 400 (read)
[2025-04-19 18:30:30] 2025-04-19 08:29:51,770 | INFO     | executing command: lscpu
[2025-04-19 18:30:30] 2025-04-19 08:29:51,802 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 18:30:30] 2025-04-19 08:29:53,233 | INFO     | monitor loop #132: job 0:6605179583 is in state 'finished'
[2025-04-19 18:30:30] 2025-04-19 08:29:53,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:30:30] 2025-04-19 08:29:55,737 | INFO     | monitor loop #133: job 0:6605179583 is in state 'finished'
[2025-04-19 18:30:30] 2025-04-19 08:29:55,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:30:30] 2025-04-19 08:29:57,946 | INFO     | PID=179898 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 18:30:30] 2025-04-19 08:29:58,241 | INFO     | monitor loop #134: job 0:6605179583 is in state 'finished'
[2025-04-19 18:30:30] 2025-04-19 08:29:58,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:30:30] 2025-04-19 08:30:00,748 | INFO     | monitor loop #135: job 0:6605179583 is in state 'finished'
[2025-04-19 18:30:30] 2025-04-19 08:30:00,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:30:30] 2025-04-19 08:30:03,252 | INFO     | monitor loop #136: job 0:6605179583 is in state 'finished'
[2025-04-19 18:30:30] 2025-04-19 08:30:03,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:30:30] 2025-04-19 08:30:05,757 | INFO     | monitor loop #137: job 0:6605179583 is in state 'finished'
[2025-04-19 18:30:30] 2025-04-19 08:30:05,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:30:30] 2025-04-19 08:30:08,260 | INFO     | monitor loop #138: job 0:6605179583 is in state 'finished'
[2025-04-19 18:30:30] 2025-04-19 08:30:08,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:30:30] 2025-04-19 08:30:09,169 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 18:30:30] 2025-04-19 08:30:09,170 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6605179583/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 18:30:30] 2025-04-19 08:30:09,170 | INFO     | extracted standard info from prmon json
[2025-04-19 18:30:30] 2025-04-19 08:30:09,170 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 18:30:30] 2025-04-19 08:30:09,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 18:30:30] 2025-04-19 08:30:09,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 18:30:30] 2025-04-19 08:30:09,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 18:30:30] 2025-04-19 08:30:09,171 | INFO     | fitting pss+swap vs Time
[2025-04-19 18:30:30] 2025-04-19 08:30:09,171 | INFO     | sum of square deviations: 129070987.74603173
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | sum of deviations: 21329323701.650795
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | mean x: 1745048696.5079365
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | mean y: 2355899.698412698
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | -- intersect: -288371578265.88947
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | intersect: -288371578265.88947
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | chi2: 1.4730947752649466
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | -- intersect: -288371578265.88947
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | current memory leak: 165.25 B/s (using 63 data points, chi2=1.47)
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | ..............................
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | . Timing measurements:
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | . get job = 0 s
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | . initial setup = 4 s
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | . payload setup = 9 s
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | . stage-in = 0 s
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | . payload execution = 5349 s
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | . stage-out = 0 s
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | . log creation = 0 s
[2025-04-19 18:30:30] 2025-04-19 08:30:09,172 | INFO     | ..............................
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | 
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | job summary report
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | --------------------------------------------------
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | PanDA job id: 6605179583
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | task id: 44075483
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | errors: (none)
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | pilot state: finished 
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | transexitcode: 0
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | exeerrorcode: 0
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | exeerrordiag: 
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | exitcode: 0
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | exitmsg: OK
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | cpuconsumptiontime: 21855 s
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | nevents: 400
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | neventsw: 0
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | pid: 186305
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | pgrp: 186305
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | corecount: 5
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | event service: False
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | sizes: {0: 2426801, 6: 2427007, 11: 2427035, 5362: 2452360, 5363: 2461357, 5380: 2461471}
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | --------------------------------------------------
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | 
[2025-04-19 18:30:30] 2025-04-19 08:30:09,213 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 18:30:30] 2025-04-19 08:30:09,265 | INFO     | job 6605179583 has completed (purged errors)
[2025-04-19 18:30:30] 2025-04-19 08:30:09,266 | INFO     | overall cleanup function is called
[2025-04-19 18:30:30] 2025-04-19 08:30:10,273 | INFO     | --- collectZombieJob: --- 10, [186305]
[2025-04-19 18:30:30] 2025-04-19 08:30:10,273 | INFO     | zombie collector waiting for pid 186305
[2025-04-19 18:30:30] 2025-04-19 08:30:10,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 18:30:30] 2025-04-19 08:30:10,273 | INFO     | collected zombie processes
[2025-04-19 18:30:30] 2025-04-19 08:30:10,273 | INFO     | will attempt to kill all subprocesses of pid=186305
[2025-04-19 18:30:30] 2025-04-19 08:30:10,311 | INFO     | process IDs to be killed: [186305] (in reverse order)
[2025-04-19 18:30:30] 2025-04-19 08:30:10,381 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 18:30:30] 2025-04-19 08:30:10,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 18:30:30] 2025-04-19 08:30:10,383 | INFO     | did not find any defunct processes belonging to 186305
[2025-04-19 18:30:30] 2025-04-19 08:30:10,384 | INFO     | did not find any defunct processes belonging to 186305
[2025-04-19 18:30:30] 2025-04-19 08:30:10,384 | INFO     | ready for new job
[2025-04-19 18:30:30] 2025-04-19 08:30:10,384 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 18:30:30] 2025-04-19 08:30:10,384 | INFO     | **************************************
[2025-04-19 18:30:30] 2025-04-19 08:30:10,385 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 18:30:30] 2025-04-19 08:30:10,385 | INFO     | **************************************
[2025-04-19 18:30:30] 2025-04-19 08:30:10,385 | INFO     | 
[2025-04-19 18:30:30] 2025-04-19 08:30:10,385 | INFO     | pilot is running in a VM
[2025-04-19 18:30:30] 2025-04-19 08:30:10,385 | INFO     | architecture information:
[2025-04-19 18:30:30] 2025-04-19 08:30:10,386 | INFO     | executing command: cat /etc/os-release
[2025-04-19 18:30:30] 2025-04-19 08:30:10,405 | INFO     | cat /etc/os-release:
[2025-04-19 18:30:30] NAME="CentOS Linux"
[2025-04-19 18:30:30] VERSION="7 (Core)"
[2025-04-19 18:30:30] ID="centos"
[2025-04-19 18:30:30] ID_LIKE="rhel fedora"
[2025-04-19 18:30:30] VERSION_ID="7"
[2025-04-19 18:30:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 18:30:30] ANSI_COLOR="0;31"
[2025-04-19 18:30:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 18:30:30] HOME_URL="https://www.centos.org/"
[2025-04-19 18:30:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 18:30:30] 
[2025-04-19 18:30:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 18:30:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 18:30:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 18:30:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 18:30:30] 
[2025-04-19 18:30:30] 2025-04-19 08:30:10,405 | INFO     | **************************************
[2025-04-19 18:30:30] 2025-04-19 08:30:10,908 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-19 18:30:30] 2025-04-19 08:30:10,931 | INFO     | sufficient remaining disk space (91696922624 B)
[2025-04-19 18:30:30] 2025-04-19 08:30:10,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 18:30:30] 2025-04-19 08:30:10,931 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 18:30:30] 2025-04-19 08:30:10,931 | INFO     | update_server=False
[2025-04-19 18:30:30] 2025-04-19 08:30:10,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 18:30:30] 2025-04-19 08:30:10,932 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 18:30:30] 2025-04-19 08:30:10,932 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 18:30:30] 2025-04-19 08:30:10,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 18:30:30] 2025-04-19 08:30:10,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 18:30:30] 2025-04-19 08:30:10,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:30:30] 2025-04-19 08:30:11,222 | INFO     | all job control threads have been joined
[2025-04-19 18:30:30] 2025-04-19 08:30:11,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 18:30:30] 2025-04-19 08:30:11,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:30:30] 2025-04-19 08:30:11,773 | INFO     | aborting loop
[2025-04-19 18:30:30] 2025-04-19 08:30:11,848 | INFO     | all payload control threads have been joined
[2025-04-19 18:30:30] 2025-04-19 08:30:11,875 | INFO     | all data control threads have been joined
[2025-04-19 18:30:30] 2025-04-19 08:30:11,933 | INFO     | [job] retrieve thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:11,933 | INFO     | [job] queue monitor thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,228 | INFO     | [job] control thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 18:30:30] 2025-04-19 08:30:12,674 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,674 | INFO     | [job] validate thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,773 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,787 | INFO     | [job] job monitor thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,788 | INFO     | [data] copytool_in thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,851 | INFO     | [payload] control thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,880 | INFO     | [data] control thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,977 | INFO     | [payload] validate_post thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:12,994 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:13,022 | INFO     | [payload] failed_post thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:14,251 | INFO     | [data] copytool_out thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:15,321 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:21,771 | INFO     | job.realtimelogging is not enabled
[2025-04-19 18:30:30] 2025-04-19 08:30:22,782 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 18:30:30] 2025-04-19 08:30:24,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123246201677632)>', '<ExcThread(monitor, started 123245118334720)>']
[2025-04-19 18:30:30] 2025-04-19 08:30:24,984 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 18:30:30] 2025-04-19 08:30:24,985 | INFO     | [monitor] control thread has ended
[2025-04-19 18:30:30] 2025-04-19 08:30:29,798 | INFO     | all workflow threads have been joined
[2025-04-19 18:30:30] 2025-04-19 08:30:29,799 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 18:30:30] 2025-04-19 08:30:29,799 | INFO     | traces error code: 0
[2025-04-19 18:30:30] 2025-04-19 08:30:29,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 18:30:30] 2025-04-19 08:30:29,869 [wrapper] ==== pilot stdout END ====
[2025-04-19 18:30:30] 2025-04-19 08:30:29,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 18:30:30] 2025-04-19 08:30:29,879 [wrapper] pilotpid: 179898
[2025-04-19 18:30:30] 2025-04-19 08:30:29,884 [wrapper] Pilot exit status: 0
[2025-04-19 18:30:30] 2025-04-19 08:30:29,904 [wrapper] pandaids: 6605179583
[2025-04-19 18:30:30] 2025-04-19 08:30:29,964 [wrapper] cleanup supervisor_pilot  199517 179899
[2025-04-19 18:30:30] 2025-04-19 08:30:29,969 [wrapper] Test setup, not cleaning
[2025-04-19 18:30:30] 2025-04-19 08:30:29,974 [wrapper] apfmon messages muted
[2025-04-19 18:30:30] 2025-04-19 08:30:29,978 [wrapper] ==== wrapper stdout END ====
[2025-04-19 18:30:30] 2025-04-19 08:30:29,983 [wrapper] ==== wrapper stderr END ====
[2025-04-19 18:30:30]  *** Error codes and diagnostics ***
[2025-04-19 18:30:30]     "exeErrorCode": 0,
[2025-04-19 18:30:30]     "exeErrorDiag": "",
[2025-04-19 18:30:30]     "pilotErrorCode": 0,
[2025-04-19 18:30:30]     "pilotErrorDiag": "",
[2025-04-19 18:30:30]  *** Listing of results directory ***
[2025-04-19 18:30:30] total 414612
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc    495897 Apr 17 18:07 pilot3.tar.gz
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc      5111 Apr 17 18:20 queuedata.json
[2025-04-19 18:30:30] -rwx------ 1 boinc boinc     37140 Apr 17 18:21 runpilot2-wrapper.sh
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc       100 Apr 19 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 18:30:30] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 16:59 run_atlas
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc       105 Apr 19 16:59 job.xml
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc      6256 Apr 19 16:59 init_data.xml
[2025-04-19 18:30:30] -rw-r--r-- 2 boinc boinc 222068387 Apr 19 16:59 EVNT.44075481._002063.pool.root.1
[2025-04-19 18:30:30] -rw-r--r-- 2 boinc boinc     17569 Apr 19 16:59 start_atlas.sh
[2025-04-19 18:30:30] drwxrwx--x 2 boinc boinc      4096 Apr 19 16:59 shared
[2025-04-19 18:30:30] -rw-r--r-- 2 boinc boinc    508888 Apr 19 16:59 input.tar.gz
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc         0 Apr 19 16:59 boinc_lockfile
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc      2578 Apr 19 16:59 pandaJob.out
[2025-04-19 18:30:30] -rw------- 1 boinc boinc       424 Apr 19 16:59 setup.sh.local
[2025-04-19 18:30:30] -rw------- 1 boinc boinc    991292 Apr 19 17:00 agis_schedconf.cvmfs.json
[2025-04-19 18:30:30] -rw------- 1 boinc boinc   1618536 Apr 19 17:00 agis_ddmendpoints.agis.ALL.json
[2025-04-19 18:30:30] drwx------ 4 boinc boinc      4096 Apr 19 17:00 pilot3
[2025-04-19 18:30:30] -rw------- 1 boinc boinc        96 Apr 19 18:29 pilot_heartbeat.json
[2025-04-19 18:30:30] -rw------- 1 boinc boinc 197625960 Apr 19 18:29 HITS.44075483._052936.pool.root.1
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc       529 Apr 19 18:29 boinc_task_state.xml
[2025-04-19 18:30:30] -rw------- 1 boinc boinc      1013 Apr 19 18:29 memory_monitor_summary.json
[2025-04-19 18:30:30] -rw------- 1 boinc boinc    250806 Apr 19 18:29 log.44075483._052936.job.log.tgz.1
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc      8192 Apr 19 18:30 boinc_mmap_file
[2025-04-19 18:30:30] -rw------- 1 boinc boinc      7650 Apr 19 18:30 heartbeat.json
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc        27 Apr 19 18:30 wrapper_checkpoint.txt
[2025-04-19 18:30:30] -rw------- 1 boinc boinc      4610 Apr 19 18:30 pilotlog.txt
[2025-04-19 18:30:30] -rw------- 1 boinc boinc    248516 Apr 19 18:30 log.44075483._052936.job.log.1
[2025-04-19 18:30:30] -rw------- 1 boinc boinc       357 Apr 19 18:30 output.list
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc       620 Apr 19 18:30 runtime_log
[2025-04-19 18:30:30] -rw------- 1 boinc boinc    522240 Apr 19 18:30 result.tar.gz
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc     10993 Apr 19 18:30 runtime_log.err
[2025-04-19 18:30:30] -rw------- 1 boinc boinc       648 Apr 19 18:30 1zYNDmrfZP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmOk3KDmwVVCom.diag
[2025-04-19 18:30:30] -rw-r--r-- 1 boinc boinc     22210 Apr 19 18:30 stderr.txt
[2025-04-19 18:30:30] HITS file was successfully produced:
[2025-04-19 18:30:30] -rw------- 1 boinc boinc 197625960 Apr 19 18:29 shared/HITS.pool.root.1
[2025-04-19 18:30:30]  *** Contents of shared directory: ***
[2025-04-19 18:30:30] total 410896
[2025-04-19 18:30:30] -rw-r--r-- 2 boinc boinc 222068387 Apr 19 16:59 ATLAS.root_0
[2025-04-19 18:30:30] -rw-r--r-- 2 boinc boinc     17569 Apr 19 16:59 start_atlas.sh
[2025-04-19 18:30:30] -rw-r--r-- 2 boinc boinc    508888 Apr 19 16:59 input.tar.gz
[2025-04-19 18:30:30] -rw------- 1 boinc boinc 197625960 Apr 19 18:29 HITS.pool.root.1
[2025-04-19 18:30:30] -rw------- 1 boinc boinc    522240 Apr 19 18:30 result.tar.gz
18:30:32 (176273): run_atlas exited; CPU time 20399.305018
18:30:32 (176273): called boinc_finish(0)

</stderr_txt>
]]>

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