Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
15:07:15 (147424): wrapper (7.7.26015): starting
15:07:15 (147424): wrapper: running run_atlas (--nthreads 5)
[2025-04-19 15:07:15] Arguments: --nthreads 5
[2025-04-19 15:07:15] Threads: 5
[2025-04-19 15:07:15] Checking for CVMFS
[2025-04-19 15:07:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 15:07:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 15:07:15] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 15:07:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 15:07:16] 2.12.7.0 3239 523 47316 145026 2 56 2737268 4096000 0 130560 0 355038 99.986 223942 3296 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-19 15:07:16] CVMFS is ok
[2025-04-19 15:07:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 15:07:16] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-19 15:07:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-19 15:07:16] Further information can be found at the LHC@home message board.
[2025-04-19 15:07:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 15:07:16] Checking for apptainer binary...
[2025-04-19 15:07:16] apptainer is not installed, using version from CVMFS
[2025-04-19 15:07:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 15:07:17] BoincUbuntu
[2025-04-19 15:07:17] apptainer works
[2025-04-19 15:07:17] Set ATHENA_PROC_NUMBER=5
[2025-04-19 15:07:17] Set ATHENA_CORE_NUMBER=5
[2025-04-19 15:07:17] Starting ATLAS job with PandaID=6604464958
[2025-04-19 15:07:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 16:59:27]  *** The last 200 lines of the pilot log: ***
[2025-04-19 16:59:27] 2025-04-19 06:58:40,964 | INFO     |  -- lfn=log.44075483._044776.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 16:59:27] 2025-04-19 06:58:40,964 | INFO     | stage-out finished correctly
[2025-04-19 16:59:27] 2025-04-19 06:58:42,155 | INFO     | PID=151051 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 16:59:27] 2025-04-19 06:58:43,809 | WARNING  | process 157468 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 16:59:27] 2025-04-19 06:58:43,809 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6604464958/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 16:59:27] 2025-04-19 06:58:43,881 | INFO     | number of running child processes to parent process 157468: 1
[2025-04-19 16:59:27] 2025-04-19 06:58:43,881 | INFO     | maximum number of monitored processes: 6
[2025-04-19 16:59:27] 2025-04-19 06:58:44,107 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 16:59:27] 2025-04-19 06:58:45,231 | INFO     | job 6604464958 has state=finished
[2025-04-19 16:59:27] 2025-04-19 06:58:45,231 | INFO     | preparing for final server update for job 6604464958 in state='finished'
[2025-04-19 16:59:27] 2025-04-19 06:58:46,286 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-19 16:59:27] 2025-04-19 06:58:46,287 | INFO     | this job has now completed (state=finished)
[2025-04-19 16:59:27] 2025-04-19 06:58:46,287 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 16:59:27] 2025-04-19 06:58:46,287 | INFO     | log transfer has been attempted: DONE
[2025-04-19 16:59:27] 2025-04-19 06:58:46,287 | INFO     | job 6604464958 has finished - writing final server update
[2025-04-19 16:59:27] 2025-04-19 06:58:46,287 | INFO     | total number of processed events: 400 (read)
[2025-04-19 16:59:27] 2025-04-19 06:58:46,296 | INFO     | executing command: lscpu
[2025-04-19 16:59:27] 2025-04-19 06:58:46,350 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 16:59:27] 2025-04-19 06:58:46,385 | INFO     | monitor loop #135: job 0:6604464958 is in state 'finished'
[2025-04-19 16:59:27] 2025-04-19 06:58:46,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 16:59:27] 2025-04-19 06:58:48,887 | INFO     | monitor loop #136: job 0:6604464958 is in state 'finished'
[2025-04-19 16:59:27] 2025-04-19 06:58:48,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 16:59:27] 2025-04-19 06:58:51,391 | INFO     | monitor loop #137: job 0:6604464958 is in state 'finished'
[2025-04-19 16:59:27] 2025-04-19 06:58:51,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 16:59:27] 2025-04-19 06:58:53,894 | INFO     | monitor loop #138: job 0:6604464958 is in state 'finished'
[2025-04-19 16:59:27] 2025-04-19 06:58:53,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 16:59:27] 2025-04-19 06:58:56,395 | INFO     | monitor loop #139: job 0:6604464958 is in state 'finished'
[2025-04-19 16:59:27] 2025-04-19 06:58:56,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 16:59:27] 2025-04-19 06:58:58,901 | INFO     | monitor loop #140: job 0:6604464958 is in state 'finished'
[2025-04-19 16:59:27] 2025-04-19 06:58:58,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 16:59:27] 2025-04-19 06:59:01,406 | INFO     | monitor loop #141: job 0:6604464958 is in state 'finished'
[2025-04-19 16:59:27] 2025-04-19 06:59:01,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 16:59:27] 2025-04-19 06:59:03,909 | INFO     | monitor loop #142: job 0:6604464958 is in state 'finished'
[2025-04-19 16:59:27] 2025-04-19 06:59:03,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 16:59:27] 2025-04-19 06:59:04,310 | INFO     | PID=151051 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 16:59:27] 2025-04-19 06:59:05,311 | INFO     | 6690s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 16:59:27] 2025-04-19 06:59:06,414 | INFO     | monitor loop #143: job 0:6604464958 is in state 'finished'
[2025-04-19 16:59:27] 2025-04-19 06:59:06,414 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 16:59:27] 2025-04-19 06:59:06,489 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 16:59:27] 2025-04-19 06:59:06,489 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6604464958/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 16:59:27] 2025-04-19 06:59:06,490 | INFO     | extracted standard info from prmon json
[2025-04-19 16:59:27] 2025-04-19 06:59:06,490 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 16:59:27] 2025-04-19 06:59:06,490 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 16:59:27] 2025-04-19 06:59:06,490 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 16:59:27] 2025-04-19 06:59:06,490 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 16:59:27] 2025-04-19 06:59:06,492 | INFO     | fitting pss+swap vs Time
[2025-04-19 16:59:27] 2025-04-19 06:59:06,492 | INFO     | sum of square deviations: 254146249.85915494
[2025-04-19 16:59:27] 2025-04-19 06:59:06,492 | INFO     | sum of deviations: 29317573351.661972
[2025-04-19 16:59:27] 2025-04-19 06:59:06,492 | INFO     | mean x: 1745042397.8732395
[2025-04-19 16:59:27] 2025-04-19 06:59:06,492 | INFO     | mean y: 2306072.295774648
[2025-04-19 16:59:27] 2025-04-19 06:59:06,493 | INFO     | -- intersect: -201300717402.42136
[2025-04-19 16:59:27] 2025-04-19 06:59:06,493 | INFO     | intersect: -201300717402.42136
[2025-04-19 16:59:27] 2025-04-19 06:59:06,493 | INFO     | chi2: 2.9274018791814327
[2025-04-19 16:59:27] 2025-04-19 06:59:06,493 | INFO     | -- intersect: -201300717402.42136
[2025-04-19 16:59:27] 2025-04-19 06:59:06,493 | INFO     | current memory leak: 115.36 B/s (using 71 data points, chi2=2.93)
[2025-04-19 16:59:27] 2025-04-19 06:59:06,493 | INFO     | ..............................
[2025-04-19 16:59:27] 2025-04-19 06:59:06,494 | INFO     | . Timing measurements:
[2025-04-19 16:59:27] 2025-04-19 06:59:06,494 | INFO     | . get job = 0 s
[2025-04-19 16:59:27] 2025-04-19 06:59:06,494 | INFO     | . initial setup = 6 s
[2025-04-19 16:59:27] 2025-04-19 06:59:06,494 | INFO     | . payload setup = 15 s
[2025-04-19 16:59:27] 2025-04-19 06:59:06,494 | INFO     | . stage-in = 0 s
[2025-04-19 16:59:27] 2025-04-19 06:59:06,494 | INFO     | . payload execution = 6620 s
[2025-04-19 16:59:27] 2025-04-19 06:59:06,494 | INFO     | . stage-out = 0 s
[2025-04-19 16:59:27] 2025-04-19 06:59:06,494 | INFO     | . log creation = 0 s
[2025-04-19 16:59:27] 2025-04-19 06:59:06,494 | INFO     | ..............................
[2025-04-19 16:59:27] 2025-04-19 06:59:06,564 | INFO     | 
[2025-04-19 16:59:27] 2025-04-19 06:59:06,564 | INFO     | job summary report
[2025-04-19 16:59:27] 2025-04-19 06:59:06,564 | INFO     | --------------------------------------------------
[2025-04-19 16:59:27] 2025-04-19 06:59:06,564 | INFO     | PanDA job id: 6604464958
[2025-04-19 16:59:27] 2025-04-19 06:59:06,564 | INFO     | task id: 44075483
[2025-04-19 16:59:27] 2025-04-19 06:59:06,564 | INFO     | errors: (none)
[2025-04-19 16:59:27] 2025-04-19 06:59:06,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 16:59:27] 2025-04-19 06:59:06,565 | INFO     | pilot state: finished 
[2025-04-19 16:59:27] 2025-04-19 06:59:06,565 | INFO     | transexitcode: 0
[2025-04-19 16:59:27] 2025-04-19 06:59:06,565 | INFO     | exeerrorcode: 0
[2025-04-19 16:59:27] 2025-04-19 06:59:06,565 | INFO     | exeerrordiag: 
[2025-04-19 16:59:27] 2025-04-19 06:59:06,565 | INFO     | exitcode: 0
[2025-04-19 16:59:27] 2025-04-19 06:59:06,565 | INFO     | exitmsg: OK
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | cpuconsumptiontime: 27579 s
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | nevents: 400
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | neventsw: 0
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | pid: 157468
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | pgrp: 157468
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | corecount: 5
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | event service: False
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | sizes: {0: 2426851, 9: 2427057, 11: 2427085, 6639: 2452388, 6640: 2461329, 6643: 2461385, 6666: 2461683}
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | --------------------------------------------------
[2025-04-19 16:59:27] 2025-04-19 06:59:06,566 | INFO     | 
[2025-04-19 16:59:27] 2025-04-19 06:59:06,567 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-19 16:59:27] 2025-04-19 06:59:06,626 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,626 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,627 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,627 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,629 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 16:59:27] 2025-04-19 06:59:06,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 16:59:27] 2025-04-19 06:59:06,630 | INFO     | job 6604464958 has completed (purged errors)
[2025-04-19 16:59:27] 2025-04-19 06:59:06,630 | INFO     | overall cleanup function is called
[2025-04-19 16:59:27] 2025-04-19 06:59:07,639 | INFO     | --- collectZombieJob: --- 10, [157468]
[2025-04-19 16:59:27] 2025-04-19 06:59:07,639 | INFO     | zombie collector waiting for pid 157468
[2025-04-19 16:59:27] 2025-04-19 06:59:07,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 16:59:27] 2025-04-19 06:59:07,640 | INFO     | collected zombie processes
[2025-04-19 16:59:27] 2025-04-19 06:59:07,640 | INFO     | will attempt to kill all subprocesses of pid=157468
[2025-04-19 16:59:27] 2025-04-19 06:59:07,715 | INFO     | process IDs to be killed: [157468] (in reverse order)
[2025-04-19 16:59:27] 2025-04-19 06:59:07,812 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 16:59:27] 2025-04-19 06:59:07,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 16:59:27] 2025-04-19 06:59:07,814 | INFO     | did not find any defunct processes belonging to 157468
[2025-04-19 16:59:27] 2025-04-19 06:59:07,815 | INFO     | did not find any defunct processes belonging to 157468
[2025-04-19 16:59:27] 2025-04-19 06:59:07,816 | INFO     | ready for new job
[2025-04-19 16:59:27] 2025-04-19 06:59:07,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 16:59:27] 2025-04-19 06:59:07,818 | INFO     | **************************************
[2025-04-19 16:59:27] 2025-04-19 06:59:07,818 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 16:59:27] 2025-04-19 06:59:07,818 | INFO     | **************************************
[2025-04-19 16:59:27] 2025-04-19 06:59:07,818 | INFO     | 
[2025-04-19 16:59:27] 2025-04-19 06:59:07,818 | INFO     | pilot is running in a VM
[2025-04-19 16:59:27] 2025-04-19 06:59:07,818 | INFO     | architecture information:
[2025-04-19 16:59:27] 2025-04-19 06:59:07,820 | INFO     | executing command: cat /etc/os-release
[2025-04-19 16:59:27] 2025-04-19 06:59:07,848 | INFO     | cat /etc/os-release:
[2025-04-19 16:59:27] NAME="CentOS Linux"
[2025-04-19 16:59:27] VERSION="7 (Core)"
[2025-04-19 16:59:27] ID="centos"
[2025-04-19 16:59:27] ID_LIKE="rhel fedora"
[2025-04-19 16:59:27] VERSION_ID="7"
[2025-04-19 16:59:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 16:59:27] ANSI_COLOR="0;31"
[2025-04-19 16:59:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 16:59:27] HOME_URL="https://www.centos.org/"
[2025-04-19 16:59:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 16:59:27] 
[2025-04-19 16:59:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 16:59:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 16:59:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 16:59:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 16:59:27] 
[2025-04-19 16:59:27] 2025-04-19 06:59:07,848 | INFO     | **************************************
[2025-04-19 16:59:27] 2025-04-19 06:59:08,352 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-19 16:59:27] 2025-04-19 06:59:08,400 | INFO     | sufficient remaining disk space (91490353152 B)
[2025-04-19 16:59:27] 2025-04-19 06:59:08,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 16:59:27] 2025-04-19 06:59:08,400 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 16:59:27] 2025-04-19 06:59:08,400 | INFO     | update_server=False
[2025-04-19 16:59:27] 2025-04-19 06:59:08,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 16:59:27] 2025-04-19 06:59:08,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 16:59:27] 2025-04-19 06:59:08,402 | INFO     | aborting loop
[2025-04-19 16:59:27] 2025-04-19 06:59:08,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 16:59:27] 2025-04-19 06:59:08,403 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 16:59:27] 2025-04-19 06:59:08,403 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 16:59:27] 2025-04-19 06:59:08,403 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 16:59:27] 2025-04-19 06:59:08,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 16:59:27] 2025-04-19 06:59:08,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 16:59:27] 2025-04-19 06:59:08,477 | INFO     | all job control threads have been joined
[2025-04-19 16:59:27] 2025-04-19 06:59:08,544 | INFO     | all data control threads have been joined
[2025-04-19 16:59:27] 2025-04-19 06:59:09,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 16:59:27] 2025-04-19 06:59:09,407 | INFO     | [job] retrieve thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:09,408 | INFO     | [job] job monitor thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:09,409 | INFO     | [job] queue monitor thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:09,483 | INFO     | [job] control thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:09,484 | INFO     | all payload control threads have been joined
[2025-04-19 16:59:27] 2025-04-19 06:59:09,550 | INFO     | [data] control thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:09,765 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:09,821 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:10,012 | INFO     | [job] validate thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:10,147 | INFO     | [payload] validate_post thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:10,195 | INFO     | [payload] failed_post thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:10,268 | INFO     | [data] copytool_in thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:10,292 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:10,485 | INFO     | [payload] control thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:11,098 | INFO     | [data] copytool_out thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:12,408 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:19,339 | INFO     | job.realtimelogging is not enabled
[2025-04-19 16:59:27] 2025-04-19 06:59:20,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 16:59:27] 2025-04-19 06:59:22,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125557066090304)>', '<ExcThread(monitor, started 125556230178560)>']
[2025-04-19 16:59:27] 2025-04-19 06:59:22,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 16:59:27] 2025-04-19 06:59:22,475 | INFO     | [monitor] control thread has ended
[2025-04-19 16:59:27] 2025-04-19 06:59:27,478 | INFO     | all workflow threads have been joined
[2025-04-19 16:59:27] 2025-04-19 06:59:27,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 16:59:27] 2025-04-19 06:59:27,478 | INFO     | traces error code: 0
[2025-04-19 16:59:27] 2025-04-19 06:59:27,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 16:59:27] 2025-04-19 06:59:27,579 [wrapper] ==== pilot stdout END ====
[2025-04-19 16:59:27] 2025-04-19 06:59:27,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 16:59:27] 2025-04-19 06:59:27,592 [wrapper] pilotpid: 151051
[2025-04-19 16:59:27] 2025-04-19 06:59:27,598 [wrapper] Pilot exit status: 0
[2025-04-19 16:59:27] 2025-04-19 06:59:27,625 [wrapper] pandaids: 6604464958
[2025-04-19 16:59:27] 2025-04-19 06:59:27,708 [wrapper] cleanup supervisor_pilot  173626 151052
[2025-04-19 16:59:27] 2025-04-19 06:59:27,715 [wrapper] Test setup, not cleaning
[2025-04-19 16:59:27] 2025-04-19 06:59:27,721 [wrapper] apfmon messages muted
[2025-04-19 16:59:27] 2025-04-19 06:59:27,727 [wrapper] ==== wrapper stdout END ====
[2025-04-19 16:59:27] 2025-04-19 06:59:27,733 [wrapper] ==== wrapper stderr END ====
[2025-04-19 16:59:27]  *** Error codes and diagnostics ***
[2025-04-19 16:59:27]     "exeErrorCode": 0,
[2025-04-19 16:59:27]     "exeErrorDiag": "",
[2025-04-19 16:59:27]     "pilotErrorCode": 0,
[2025-04-19 16:59:27]     "pilotErrorDiag": "",
[2025-04-19 16:59:27]  *** Listing of results directory ***
[2025-04-19 16:59:27] total 416172
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc    495897 Apr 17 05:16 pilot3.tar.gz
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc      5111 Apr 17 05:21 queuedata.json
[2025-04-19 16:59:27] -rwx------ 1 boinc boinc     37140 Apr 17 05:23 runpilot2-wrapper.sh
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc       100 Apr 19 15:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 16:59:27] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 15:07 run_atlas
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc       105 Apr 19 15:07 job.xml
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc      6256 Apr 19 15:07 init_data.xml
[2025-04-19 16:59:27] -rw-r--r-- 2 boinc boinc 225821536 Apr 19 15:07 EVNT.44075481._001751.pool.root.1
[2025-04-19 16:59:27] -rw-r--r-- 2 boinc boinc     17569 Apr 19 15:07 start_atlas.sh
[2025-04-19 16:59:27] drwxrwx--x 2 boinc boinc      4096 Apr 19 15:07 shared
[2025-04-19 16:59:27] -rw-r--r-- 2 boinc boinc    508887 Apr 19 15:07 input.tar.gz
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc         0 Apr 19 15:07 boinc_lockfile
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc      2578 Apr 19 15:07 pandaJob.out
[2025-04-19 16:59:27] -rw------- 1 boinc boinc       424 Apr 19 15:07 setup.sh.local
[2025-04-19 16:59:27] -rw------- 1 boinc boinc    991292 Apr 19 15:07 agis_schedconf.cvmfs.json
[2025-04-19 16:59:27] -rw------- 1 boinc boinc   1618536 Apr 19 15:07 agis_ddmendpoints.agis.ALL.json
[2025-04-19 16:59:27] drwx------ 4 boinc boinc      4096 Apr 19 15:07 pilot3
[2025-04-19 16:59:27] -rw------- 1 boinc boinc 195461555 Apr 19 16:58 HITS.44075483._044776.pool.root.1
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc       529 Apr 19 16:58 boinc_task_state.xml
[2025-04-19 16:59:27] -rw------- 1 boinc boinc      1010 Apr 19 16:58 memory_monitor_summary.json
[2025-04-19 16:59:27] -rw------- 1 boinc boinc    245062 Apr 19 16:58 log.44075483._044776.job.log.tgz.1
[2025-04-19 16:59:27] -rw------- 1 boinc boinc        96 Apr 19 16:58 pilot_heartbeat.json
[2025-04-19 16:59:27] -rw------- 1 boinc boinc      7654 Apr 19 16:59 heartbeat.json
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc      8192 Apr 19 16:59 boinc_mmap_file
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc        27 Apr 19 16:59 wrapper_checkpoint.txt
[2025-04-19 16:59:27] -rw------- 1 boinc boinc      4610 Apr 19 16:59 pilotlog.txt
[2025-04-19 16:59:27] -rw------- 1 boinc boinc    259721 Apr 19 16:59 log.44075483._044776.job.log.1
[2025-04-19 16:59:27] -rw------- 1 boinc boinc       357 Apr 19 16:59 output.list
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc       620 Apr 19 16:59 runtime_log
[2025-04-19 16:59:27] -rw------- 1 boinc boinc    522240 Apr 19 16:59 result.tar.gz
[2025-04-19 16:59:27] -rw------- 1 boinc boinc       648 Apr 19 16:59 ZkkKDmEXNP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmS1aLDmhExbEm.diag
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc     10993 Apr 19 16:59 runtime_log.err
[2025-04-19 16:59:27] -rw-r--r-- 1 boinc boinc     22419 Apr 19 16:59 stderr.txt
[2025-04-19 16:59:27] HITS file was successfully produced:
[2025-04-19 16:59:27] -rw------- 1 boinc boinc 195461555 Apr 19 16:58 shared/HITS.pool.root.1
[2025-04-19 16:59:27]  *** Contents of shared directory: ***
[2025-04-19 16:59:27] total 412452
[2025-04-19 16:59:27] -rw-r--r-- 2 boinc boinc 225821536 Apr 19 15:07 ATLAS.root_0
[2025-04-19 16:59:27] -rw-r--r-- 2 boinc boinc     17569 Apr 19 15:07 start_atlas.sh
[2025-04-19 16:59:27] -rw-r--r-- 2 boinc boinc    508887 Apr 19 15:07 input.tar.gz
[2025-04-19 16:59:27] -rw------- 1 boinc boinc 195461555 Apr 19 16:58 HITS.pool.root.1
[2025-04-19 16:59:27] -rw------- 1 boinc boinc    522240 Apr 19 16:59 result.tar.gz
16:59:29 (147424): run_atlas exited; CPU time 26147.192388
16:59:29 (147424): called boinc_finish(0)

</stderr_txt>
]]>

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