Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 12:49:37 (49392): Detected: vboxwrapper 26206
2025-04-19 12:49:37 (49392): Detected: BOINC client v8.0.2
2025-04-19 12:49:38 (49392): Detected: VirtualBox VboxManage Interface (Version: 7.0.24)
2025-04-19 12:49:38 (49392): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 12:49:38 (49392): Create VM. (boinc_a1a6f0d31a728ff9, slot#0)
2025-04-19 12:49:39 (49392): Setting Memory Size for VM. (4600MB)
2025-04-19 12:49:39 (49392): Setting CPU Count for VM. (6)
2025-04-19 12:49:39 (49392): Setting Chipset Options for VM.
2025-04-19 12:49:40 (49392): Setting Graphics Controller Options for VM.
2025-04-19 12:49:40 (49392): Setting Boot Options for VM.
2025-04-19 12:49:40 (49392): Setting Network Configuration for NAT.
2025-04-19 12:49:40 (49392): Enabling VM Network Access.
2025-04-19 12:49:41 (49392): Disabling USB Support for VM.
2025-04-19 12:49:41 (49392): Disabling COM Port Support for VM.
2025-04-19 12:49:41 (49392): Disabling LPT Port Support for VM.
2025-04-19 12:49:41 (49392): Disabling Audio Support for VM.
2025-04-19 12:49:42 (49392): Disabling Clipboard Support for VM.
2025-04-19 12:49:42 (49392): Disabling Drag and Drop Support for VM.
2025-04-19 12:49:42 (49392): Adding storage controller(s) to VM.
2025-04-19 12:49:42 (49392): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 12:49:43 (49392): Adding VirtualBox Guest Additions to VM.
2025-04-19 12:49:43 (49392): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 12:49:43 (49392): forwarding host port 50338 to guest port 80
2025-04-19 12:49:44 (49392): Enabling remote desktop for VM.
2025-04-19 12:49:44 (49392): Required extension pack not installed, remote desktop not enabled.
2025-04-19 12:49:44 (49392): Enabling shared directory for VM.
2025-04-19 12:49:44 (49392): Starting VM using VBoxManage interface. (boinc_a1a6f0d31a728ff9, slot#0)
2025-04-19 12:49:49 (49392): Successfully started VM. (PID = '50376')
2025-04-19 12:49:49 (49392): Reporting VM Process ID to BOINC.
2025-04-19 12:49:49 (49392): Guest Log: BIOS: VirtualBox 7.0.24
2025-04-19 12:49:49 (49392): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 12:49:49 (49392): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 12:49:49 (49392): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 12:49:49 (49392): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 12:49:49 (49392): Detected: Web Application Enabled (http://localhost:50338)
2025-04-19 12:49:49 (49392): Preference change detected
2025-04-19 12:49:49 (49392): Setting CPU throttle for VM. (100%)
2025-04-19 12:49:49 (49392): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 12:49:51 (49392): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 12:49:51 (49392): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 12:49:54 (49392): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 12:49:54 (49392): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 12:49:54 (49392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 12:49:58 (49392): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 12:49:58 (49392): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 12:50:02 (49392): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 12:50:02 (49392): Guest Log: 00:00:00.000179 main     Log opened 2025-04-19T12:50:00.221342000Z
2025-04-19 12:50:02 (49392): Guest Log: 00:00:00.000276 main     OS Product: Linux
2025-04-19 12:50:02 (49392): Guest Log: 00:00:00.000307 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 12:50:02 (49392): Guest Log: 00:00:00.000333 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 12:50:02 (49392): Guest Log: 00:00:00.000359 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 12:50:02 (49392): Guest Log: 00:00:00.000359 main     Process ID: 1334
2025-04-19 12:50:02 (49392): Guest Log: 00:00:00.000360 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 12:50:02 (49392): Guest Log: 00:00:00.001372 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 12:50:02 (49392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 12:50:02 (49392): Guest Log: [INFO] Mounting shared directory
2025-04-19 12:50:02 (49392): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 12:50:06 (49392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 12:50:06 (49392): Guest Log: [INFO] Detected branch: prod
2025-04-19 12:50:06 (49392): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 12:50:06 (49392): Guest Log: Copying input files
2025-04-19 12:50:07 (49392): Guest Log: Copied input files into RunAtlas.
2025-04-19 12:50:08 (49392): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 12:50:08 (49392): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 12:50:08 (49392): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 12:50:08 (49392): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 12:50:12 (49392): Guest Log: 00:00:10.258683 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 102 148 000ns (GuestNow=1 745 034 612 121 335 000 ns GuestLast=1 745 067 000 223 483 000 ns fSetTimeLastLoop=true )
2025-04-19 12:50:19 (49392): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 12:50:19 (49392): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 12:50:19 (49392): Guest Log: 2.6.3.0 1627 0 30192 145025 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 12:50:20 (49392): Guest Log: copied the webapp to /var/www
2025-04-19 12:50:20 (49392): Guest Log: ATHENA_PROC_NUMBER=6
2025-04-19 12:50:20 (49392): Guest Log: ATHENA_CORE_NUMBER=6
2025-04-19 12:50:21 (49392): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 12:50:21 (49392): Guest Log:  *** Starting ATLAS job. (PandaID=6606876017 taskID=44075483) ***
2025-04-19 13:55:50 (49392): Guest Log:  *** Job finished ***
2025-04-19 13:55:50 (49392): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:39,867 | INFO     | [payload] validate_pre thread has finished
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:39,871 | INFO     | [data] copytool_in thread has finished
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:41,436 | INFO     | [data] queue_monitor thread has finished
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:43,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009965463360)>', '<ExcThread(monitor, started 140009508148992)>']
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:43,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:43,740 | INFO     | [monitor] control thread has ended
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,081 | INFO     | all workflow threads have been joined
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,081 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,082 | INFO     | traces error code: 0
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,130 [wrapper] ==== pilot stdout END ====
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,134 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,139 [wrapper] pilotpid: 5956
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,143 [wrapper] Pilot exit status: 0
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,294 [wrapper] pandaids: 6606876017
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,323 [wrapper] cleanup supervisor_pilot 30934 5957
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,330 [wrapper] Test setup, not cleaning
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,334 [wrapper] apfmon messages muted
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,338 [wrapper] ==== wrapper stdout END ====
2025-04-19 13:55:50 (49392): Guest Log: 2025-04-19 04:55:48,342 [wrapper] ==== wrapper stderr END ====
2025-04-19 13:55:50 (49392): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 13:55:50 (49392): Guest Log:     "exeErrorCode": 0,
2025-04-19 13:55:50 (49392): Guest Log:     "exeErrorDiag": "",
2025-04-19 13:55:50 (49392): Guest Log:     "pilotErrorCode": 0,
2025-04-19 13:55:50 (49392): Guest Log:     "pilotErrorDiag": "",
2025-04-19 13:55:50 (49392): Guest Log:  *** Listing of results directory ***
2025-04-19 13:55:50 (49392): Guest Log: total 197736
2025-04-19 13:55:50 (49392): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 18 20:50 pilot3.tar.gz
2025-04-19 13:55:50 (49392): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 18 21:13 queuedata.json
2025-04-19 13:55:50 (49392): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 18 21:14 runpilot2-wrapper.sh
2025-04-19 13:55:50 (49392): Guest Log: -rwxr-xr-x. 1 atlas atlas      9421 Apr 19 03:50 init_data.xml
2025-04-19 13:55:50 (49392): Guest Log: -rwxr-xr-x. 1 atlas atlas    508893 Apr 19 03:50 input.tar.gz
2025-04-19 13:55:50 (49392): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 19 03:50 start_atlas.sh
2025-04-19 13:55:50 (49392): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 03:50 EVNT.44075481._002877.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 13:55:50 (49392): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 19 03:50 pandaJob.out
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 03:50 setup.sh.local
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 19 03:51 agis_schedconf.cvmfs.json
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 03:51 agis_ddmendpoints.agis.ALL.json
2025-04-19 13:55:50 (49392): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 03:51 pilot3
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas 197390540 Apr 19 04:55 HITS.44075483._074091.pool.root.1
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas      1028 Apr 19 04:55 memory_monitor_summary.json
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas    275743 Apr 19 04:55 log.44075483._074091.job.log.tgz.1
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 04:55 pilot_heartbeat.json
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas      7721 Apr 19 04:55 heartbeat.json
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 19 04:55 pilotlog.txt
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas    367352 Apr 19 04:55 log.44075483._074091.job.log.1
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 04:55 output.list
2025-04-19 13:55:50 (49392): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 04:55 runtime_log
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas    665600 Apr 19 04:55 result.tar.gz
2025-04-19 13:55:50 (49392): Guest Log: -rw-r--r--. 1 atlas atlas     10935 Apr 19 04:55 runtime_log.err
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas       650 Apr 19 04:55 M5rMDmUD8P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmGd5KDmW8Tp4m.diag
2025-04-19 13:55:50 (49392): Guest Log: Looking for outputfile HITS.44075483._074091.pool.root.1
2025-04-19 13:55:50 (49392): Guest Log: HITS file was successfully produced
2025-04-19 13:55:50 (49392): Guest Log: -rw-------. 1 atlas atlas 197390540 Apr 19 04:55 /home/atlas/RunAtlas/HITS.44075483._074091.pool.root.1
2025-04-19 13:55:51 (49392): Guest Log: Successfully finished the ATLAS job!
2025-04-19 13:55:51 (49392): Guest Log: Copying the results back to the shared directory!
2025-04-19 13:55:51 (49392): Guest Log:  *** Contents of shared directory: ***
2025-04-19 13:55:51 (49392): Guest Log: total 411264
2025-04-19 13:55:51 (49392): Guest Log: -rwxrwxrwx. 1 root root 222526146 Apr 19 03:49 ATLAS.root_0
2025-04-19 13:55:51 (49392): Guest Log: -rwxrwxrwx. 1 root root 197390540 Apr 19 04:55 HITS.pool.root.1
2025-04-19 13:55:51 (49392): Guest Log: -rwxrwxrwx. 1 root root      9421 Apr 19 03:49 init_data.xml
2025-04-19 13:55:51 (49392): Guest Log: -rwxrwxrwx. 1 root root    508893 Apr 18 23:56 input.tar.gz
2025-04-19 13:55:51 (49392): Guest Log: -rwxrwxrwx. 1 root root    665600 Apr 19 04:55 result.tar.gz
2025-04-19 13:55:51 (49392): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 23:56 start_atlas.sh
2025-04-19 13:55:51 (49392): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 13:55:51 (49392): VM Completion File Detected.
2025-04-19 13:55:51 (49392): Powering off VM.
2025-04-19 13:55:51 (49392): Successfully stopped VM.
2025-04-19 13:55:51 (49392): Deregistering VM. (boinc_a1a6f0d31a728ff9, slot#0)
2025-04-19 13:55:51 (49392): Removing network bandwidth throttle group from VM.
2025-04-19 13:55:52 (49392): Removing VM from VirtualBox.
13:55:57 (49392): called boinc_finish(0)

</stderr_txt>
]]>

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