Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 10:09:28 (12280): Detected: vboxwrapper 26206
2025-04-19 10:09:28 (12280): Detected: BOINC client v8.0.2
2025-04-19 10:09:28 (12280): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-04-19 10:09:29 (12280): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 10:09:29 (12280): Create VM. (boinc_1173628e83759413, slot#3)
2025-04-19 10:09:30 (12280): Setting Memory Size for VM. (6600MB)
2025-04-19 10:09:30 (12280): Setting CPU Count for VM. (4)
2025-04-19 10:09:30 (12280): Setting Chipset Options for VM.
2025-04-19 10:09:30 (12280): Setting Graphics Controller Options for VM.
2025-04-19 10:09:31 (12280): Setting Boot Options for VM.
2025-04-19 10:09:31 (12280): Setting Network Configuration for NAT.
2025-04-19 10:09:31 (12280): Enabling VM Network Access.
2025-04-19 10:09:31 (12280): Disabling USB Support for VM.
2025-04-19 10:09:32 (12280): Disabling COM Port Support for VM.
2025-04-19 10:09:32 (12280): Disabling LPT Port Support for VM.
2025-04-19 10:09:32 (12280): Disabling Audio Support for VM.
2025-04-19 10:09:32 (12280): Disabling Clipboard Support for VM.
2025-04-19 10:09:33 (12280): Disabling Drag and Drop Support for VM.
2025-04-19 10:09:33 (12280): Adding storage controller(s) to VM.
2025-04-19 10:09:33 (12280): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 10:09:34 (12280): Adding VirtualBox Guest Additions to VM.
2025-04-19 10:09:34 (12280): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 10:09:34 (12280): forwarding host port 59378 to guest port 80
2025-04-19 10:09:34 (12280): Enabling remote desktop for VM.
2025-04-19 10:09:35 (12280): Enabling shared directory for VM.
2025-04-19 10:09:36 (12280): Starting VM using VBoxManage interface. (boinc_1173628e83759413, slot#3)
2025-04-19 10:09:44 (12280): Successfully started VM. (PID = '17968')
2025-04-19 10:09:44 (12280): Reporting VM Process ID to BOINC.
2025-04-19 10:09:44 (12280): Guest Log: BIOS: VirtualBox 7.0.14
2025-04-19 10:09:44 (12280): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 10:09:44 (12280): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 10:09:44 (12280): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 10:09:44 (12280): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 10:09:44 (12280): Detected: Web Application Enabled (http://localhost:59378)
2025-04-19 10:09:44 (12280): Detected: Remote Desktop Enabled (localhost:59399)
2025-04-19 10:09:44 (12280): Preference change detected
2025-04-19 10:09:44 (12280): Setting CPU throttle for VM. (100%)
2025-04-19 10:09:44 (12280): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 10:09:46 (12280): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 10:09:46 (12280): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 10:09:49 (12280): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 10:09:49 (12280): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 10:09:49 (12280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 10:09:53 (12280): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 10:09:53 (12280): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 10:10:00 (12280): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 10:10:00 (12280): Guest Log: 00:00:00.000207 main     Log opened 2025-04-19T10:09:58.608442000Z
2025-04-19 10:10:00 (12280): Guest Log: 00:00:00.000314 main     OS Product: Linux
2025-04-19 10:10:00 (12280): Guest Log: 00:00:00.000344 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 10:10:00 (12280): Guest Log: 00:00:00.000369 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 10:10:00 (12280): Guest Log: 00:00:00.000394 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 10:10:00 (12280): Guest Log: 00:00:00.000395 main     Process ID: 1371
2025-04-19 10:10:00 (12280): Guest Log: 00:00:00.000396 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 10:10:00 (12280): Guest Log: 00:00:00.001236 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 10:10:00 (12280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 10:10:00 (12280): Guest Log: [INFO] Mounting shared directory
2025-04-19 10:10:00 (12280): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 10:10:05 (12280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 10:10:05 (12280): Guest Log: [INFO] Detected branch: prod
2025-04-19 10:10:05 (12280): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 10:10:05 (12280): Guest Log: Copying input files
2025-04-19 10:10:06 (12280): Guest Log: Copied input files into RunAtlas.
2025-04-19 10:10:06 (12280): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2025-04-19 10:10:10 (12280): Guest Log: 00:00:10.003341 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 222 404 000ns (GuestNow=1 745 053 809 388 570 000 ns GuestLast=1 745 057 398 610 974 000 ns fSetTimeLastLoop=true )
2025-04-19 10:10:16 (12280): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 10:10:16 (12280): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 10:10:16 (12280): Guest Log: 2.6.3.0 1662 0 31636 145031 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2025-04-19 10:10:17 (12280): Guest Log: copied the webapp to /var/www
2025-04-19 10:10:17 (12280): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-19 10:10:17 (12280): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-19 10:10:17 (12280): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 10:10:17 (12280): Guest Log:  *** Starting ATLAS job. (PandaID=6605061988 taskID=44075483) ***
2025-04-19 11:51:16 (12280): Status Report: Elapsed Time: '6000.000000'
2025-04-19 11:51:16 (12280): Status Report: CPU Time: '19547.031250'
2025-04-19 13:31:21 (12280): Status Report: Elapsed Time: '12000.000000'
2025-04-19 13:31:21 (12280): Status Report: CPU Time: '43426.078125'
2025-04-19 13:32:46 (12280): Guest Log:  *** Job finished ***
2025-04-19 13:32:46 (12280): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:35,433 | INFO     | [data] queue_monitor thread has finished
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:39,894 | INFO     | job.realtimelogging is not enabled
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:40,896 | INFO     | [payload] run_realtimelog thread has finished
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:40,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354137175872)>', '<ExcThread(monitor, started 140353382360832)>']
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:41,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:41,343 | INFO     | [monitor] control thread has ended
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:45,973 | INFO     | all workflow threads have been joined
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:45,973 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:45,973 | INFO     | traces error code: 0
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:45,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,070 [wrapper] ==== pilot stdout END ====
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,074 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,078 [wrapper] pilotpid: 5983
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,082 [wrapper] Pilot exit status: 0
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,107 [wrapper] pandaids: 6605061988
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,133 [wrapper] cleanup supervisor_pilot 10612 5984
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,138 [wrapper] Test setup, not cleaning
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,144 [wrapper] apfmon messages muted
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,148 [wrapper] ==== wrapper stdout END ====
2025-04-19 13:32:46 (12280): Guest Log: 2025-04-19 12:32:46,153 [wrapper] ==== wrapper stderr END ====
2025-04-19 13:32:46 (12280): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 13:32:46 (12280): Guest Log:     "exeErrorCode": 0,
2025-04-19 13:32:46 (12280): Guest Log:     "exeErrorDiag": "",
2025-04-19 13:32:46 (12280): Guest Log:     "pilotErrorCode": 0,
2025-04-19 13:32:46 (12280): Guest Log:     "pilotErrorDiag": "",
2025-04-19 13:32:46 (12280): Guest Log:  *** Listing of results directory ***
2025-04-19 13:32:46 (12280): Guest Log: total 192640
2025-04-19 13:32:46 (12280): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 06:48 pilot3.tar.gz
2025-04-19 13:32:46 (12280): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 06:56 queuedata.json
2025-04-19 13:32:46 (12280): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 06:58 runpilot2-wrapper.sh
2025-04-19 13:32:46 (12280): Guest Log: -rwxr-xr-x. 1 atlas atlas      9271 Apr 19 09:10 init_data.xml
2025-04-19 13:32:46 (12280): Guest Log: -rwxr-xr-x. 1 atlas atlas    508890 Apr 19 09:10 input.tar.gz
2025-04-19 13:32:46 (12280): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 19 09:10 start_atlas.sh
2025-04-19 13:32:46 (12280): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 09:10 EVNT.44075481._002028.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 13:32:46 (12280): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 19 09:10 pandaJob.out
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas       460 Apr 19 09:10 setup.sh.local
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas    991300 Apr 19 09:11 agis_schedconf.cvmfs.json
2025-04-19 13:32:46 (12280): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 09:11 pilot3
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas 190783058 Apr 19 12:31 HITS.44075483._052000.pool.root.1
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 12:31 pilot_heartbeat.json
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas      1032 Apr 19 12:32 memory_monitor_summary.json
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 12:32 agis_ddmendpoints.agis.ALL.json
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas    310408 Apr 19 12:32 log.44075483._052000.job.log.tgz.1
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas      7731 Apr 19 12:32 heartbeat.json
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas      4794 Apr 19 12:32 pilotlog.txt
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas   1029004 Apr 19 12:32 log.44075483._052000.job.log.1
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 12:32 output.list
2025-04-19 13:32:46 (12280): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 12:32 runtime_log
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas   1361920 Apr 19 12:32 result.tar.gz
2025-04-19 13:32:46 (12280): Guest Log: -rw-r--r--. 1 atlas atlas     11296 Apr 19 12:32 runtime_log.err
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas       655 Apr 19 12:32 LGsLDmrNYP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm2IcLDmEsXJqm.diag
2025-04-19 13:32:46 (12280): Guest Log: Looking for outputfile HITS.44075483._052000.pool.root.1
2025-04-19 13:32:46 (12280): Guest Log: HITS file was successfully produced
2025-04-19 13:32:46 (12280): Guest Log: -rw-------. 1 atlas atlas 190783058 Apr 19 12:31 /home/atlas/RunAtlas/HITS.44075483._052000.pool.root.1
2025-04-19 13:32:47 (12280): Guest Log: Successfully finished the ATLAS job!
2025-04-19 13:32:47 (12280): Guest Log: Copying the results back to the shared directory!
2025-04-19 13:32:47 (12280): Guest Log:  *** Contents of shared directory: ***
2025-04-19 13:32:47 (12280): Guest Log: total 406924
2025-04-19 13:32:47 (12280): Guest Log: -rwxrwxrwx. 1 root root 223997005 Apr 19 09:09 ATLAS.root_0
2025-04-19 13:32:47 (12280): Guest Log: -rwxrwxrwx. 1 root root 190783058 Apr 19 12:32 HITS.pool.root.1
2025-04-19 13:32:47 (12280): Guest Log: -rwxrwxrwx. 1 root root      9271 Apr 19 09:09 init_data.xml
2025-04-19 13:32:47 (12280): Guest Log: -rwxrwxrwx. 1 root root    508890 Apr 18 23:22 input.tar.gz
2025-04-19 13:32:47 (12280): Guest Log: -rwxrwxrwx. 1 root root   1361920 Apr 19 12:32 result.tar.gz
2025-04-19 13:32:47 (12280): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 23:22 start_atlas.sh
2025-04-19 13:32:47 (12280): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 13:32:47 (12280): VM Completion File Detected.
2025-04-19 13:32:47 (12280): Powering off VM.
2025-04-19 13:32:48 (12280): Successfully stopped VM.
2025-04-19 13:32:48 (12280): Deregistering VM. (boinc_1173628e83759413, slot#3)
2025-04-19 13:32:48 (12280): Removing network bandwidth throttle group from VM.
2025-04-19 13:32:48 (12280): Removing VM from VirtualBox.
13:32:53 (12280): called boinc_finish(0)

</stderr_txt>
]]>

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