Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:07:34 (2338526): wrapper (7.7.26015): starting
11:07:34 (2338526): wrapper: running run_atlas (--nthreads 4)
[2025-04-20 11:07:34] Arguments: --nthreads 4
[2025-04-20 11:07:34] Threads: 4
[2025-04-20 11:07:34] Checking for CVMFS
[2025-04-20 11:07:34] No cvmfs_config command found, will try listing directly
[2025-04-20 11:07:34] CVMFS is ok
[2025-04-20 11:07:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 11:07:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 11:07:34] Further information can be found at the LHC@home message board.
[2025-04-20 11:07:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 11:07:34] Checking for apptainer binary...
[2025-04-20 11:07:34] which: no apptainer in ((null))
[2025-04-20 11:07:34] apptainer is not installed, using version from CVMFS
[2025-04-20 11:07:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 11:07:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-04-20 11:07:35] apptainer works
[2025-04-20 11:07:35] Set ATHENA_PROC_NUMBER=4
[2025-04-20 11:07:35] Set ATHENA_CORE_NUMBER=4
[2025-04-20 11:07:35] Starting ATLAS job with PandaID=6606874324
[2025-04-20 11:07:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 13:09:38]  *** The last 200 lines of the pilot log: ***
[2025-04-20 13:09:38] 2025-04-20 11:09:23,748 | INFO     | -- intersect: -141636303138.69012
[2025-04-20 13:09:38] 2025-04-20 11:09:23,748 | INFO     | intersect: -141636303138.69012
[2025-04-20 13:09:38] 2025-04-20 11:09:23,748 | INFO     | chi2: 5.128995780712525
[2025-04-20 13:09:38] 2025-04-20 11:09:23,749 | INFO     | sum of square deviations: 471562330.0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,749 | INFO     | sum of deviations: 49515540919.0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,749 | INFO     | mean x: 1745143570.0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,749 | INFO     | mean y: 2196622.6782608693
[2025-04-20 13:09:38] 2025-04-20 11:09:23,749 | INFO     | -- intersect: -183243415574.26025
[2025-04-20 13:09:38] 2025-04-20 11:09:23,749 | INFO     | intersect: -183243415574.26025
[2025-04-20 13:09:38] 2025-04-20 11:09:23,750 | INFO     | chi2: 4.148397017411346
[2025-04-20 13:09:38] 2025-04-20 11:09:23,750 | INFO     | current chi2=4.148397017411346 (change=19.118728211645216 %)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,750 | INFO     | right removable region: 114
[2025-04-20 13:09:38] 2025-04-20 11:09:23,750 | INFO     | sum of square deviations: 471562330.0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,750 | INFO     | sum of deviations: 17037238634.000004
[2025-04-20 13:09:38] 2025-04-20 11:09:23,751 | INFO     | mean x: 1745143875.0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,751 | INFO     | mean y: 2245470.104347826
[2025-04-20 13:09:38] 2025-04-20 11:09:23,751 | INFO     | -- intersect: -63048661605.18827
[2025-04-20 13:09:38] 2025-04-20 11:09:23,751 | INFO     | intersect: -63048661605.18827
[2025-04-20 13:09:38] 2025-04-20 11:09:23,751 | INFO     | chi2: 2.6369069738557416
[2025-04-20 13:09:38] 2025-04-20 11:09:23,751 | INFO     | current chi2=2.6369069738557416 (change=48.58824053293684 %)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,751 | INFO     | sum of square deviations: 412686807.5
[2025-04-20 13:09:38] 2025-04-20 11:09:23,752 | INFO     | sum of deviations: -4425104852.5
[2025-04-20 13:09:38] 2025-04-20 11:09:23,752 | INFO     | mean x: 1745144027.5
[2025-04-20 13:09:38] 2025-04-20 11:09:23,752 | INFO     | mean y: 2301112.390909091
[2025-04-20 13:09:38] 2025-04-20 11:09:23,752 | INFO     | -- intersect: 18714906323.066666
[2025-04-20 13:09:38] 2025-04-20 11:09:23,752 | INFO     | intersect: 18714906323.066666
[2025-04-20 13:09:38] 2025-04-20 11:09:23,752 | INFO     | chi2: 1.124711068268582
[2025-04-20 13:09:38] 2025-04-20 11:09:23,752 | INFO     | current chi2=1.124711068268582 (change=57.347336124489615 %)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,753 | INFO     | sum of square deviations: 358927660.0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,753 | INFO     | sum of deviations: -7664553924.999999
[2025-04-20 13:09:38] 2025-04-20 11:09:23,753 | INFO     | mean x: 1745144180.0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,753 | INFO     | mean y: 2310030.5523809525
[2025-04-20 13:09:38] 2025-04-20 11:09:23,753 | INFO     | -- intersect: 37268180469.4868
[2025-04-20 13:09:38] 2025-04-20 11:09:23,753 | INFO     | intersect: 37268180469.4868
[2025-04-20 13:09:38] 2025-04-20 11:09:23,754 | INFO     | chi2: 1.038280575619405
[2025-04-20 13:09:38] 2025-04-20 11:09:23,754 | INFO     | current chi2=1.038280575619405 (change=7.6846841013337785 %)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,754 | INFO     | left removable region: 30
[2025-04-20 13:09:38] 2025-04-20 11:09:23,754 | INFO     | sum of square deviations: 183761585.0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,754 | INFO     | sum of deviations: -169480417.50000003
[2025-04-20 13:09:38] 2025-04-20 11:09:23,754 | INFO     | mean x: 1745144454.5
[2025-04-20 13:09:38] 2025-04-20 11:09:23,755 | INFO     | mean y: 2331399.154761905
[2025-04-20 13:09:38] 2025-04-20 11:09:23,755 | INFO     | -- intersect: 1611850661.5537546
[2025-04-20 13:09:38] 2025-04-20 11:09:23,755 | INFO     | intersect: 1611850661.5537546
[2025-04-20 13:09:38] 2025-04-20 11:09:23,755 | INFO     | chi2: 0.0002271633321692136
[2025-04-20 13:09:38] 2025-04-20 11:09:23,755 | INFO     | -- intersect: 1611850661.5537546
[2025-04-20 13:09:38] 2025-04-20 11:09:23,755 | INFO     | current memory leak: -0.92 B/s (using 84 data points, chi2=0.00)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,756 | INFO     | ..............................
[2025-04-20 13:09:38] 2025-04-20 11:09:23,756 | INFO     | . Timing measurements:
[2025-04-20 13:09:38] 2025-04-20 11:09:23,756 | INFO     | . get job = 0 s
[2025-04-20 13:09:38] 2025-04-20 11:09:23,756 | INFO     | . initial setup = 1 s
[2025-04-20 13:09:38] 2025-04-20 11:09:23,756 | INFO     | . payload setup = 6 s
[2025-04-20 13:09:38] 2025-04-20 11:09:23,757 | INFO     | . stage-in = 0 s
[2025-04-20 13:09:38] 2025-04-20 11:09:23,757 | INFO     | . payload execution = 7264 s
[2025-04-20 13:09:38] 2025-04-20 11:09:23,757 | INFO     | . stage-out = 0 s
[2025-04-20 13:09:38] 2025-04-20 11:09:23,757 | INFO     | . log creation = 0 s
[2025-04-20 13:09:38] 2025-04-20 11:09:23,757 | INFO     | ..............................
[2025-04-20 13:09:38] 2025-04-20 11:09:23,758 | INFO     | sufficient remaining disk space (3325264134144 B)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,774 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,858 | INFO     | 
[2025-04-20 13:09:38] 2025-04-20 11:09:23,858 | INFO     | job summary report
[2025-04-20 13:09:38] 2025-04-20 11:09:23,858 | INFO     | --------------------------------------------------
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | PanDA job id: 6606874324
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | task id: 44075483
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | errors: (none)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | pilot state: finished 
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | transexitcode: 0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | exeerrorcode: 0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | exeerrordiag: 
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | exitcode: 0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | exitmsg: OK
[2025-04-20 13:09:38] 2025-04-20 11:09:23,859 | INFO     | cpuconsumptiontime: 25905 s
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | nevents: 400
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | neventsw: 0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | pid: 2356108
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | pgrp: 2356108
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | corecount: 4
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | event service: False
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | sizes: {0: 2426785, 6: 2426991, 11: 2427019, 7274: 2454284, 7276: 2463249, 7277: 2463305, 7282: 2463603}
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | --------------------------------------------------
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | 
[2025-04-20 13:09:38] 2025-04-20 11:09:23,860 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-04-20 13:09:38] 2025-04-20 11:09:23,870 | INFO     | size of work directory /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6606874324: 2873267 B (within 2537553920 B limit)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,871 | INFO     | pfn file=/scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6606874324/HITS.44075483._073709.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,871 | INFO     | total size of present files: 0 B (workdir size: 2873267 B)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,871 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6606874324/HITS.44075483._073709.pool.root.1 since it does not exist
[2025-04-20 13:09:38] 2025-04-20 11:09:23,893 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 13:09:38] 2025-04-20 11:09:23,896 | INFO     | job 6606874324 has completed (purged errors)
[2025-04-20 13:09:38] 2025-04-20 11:09:23,896 | INFO     | overall cleanup function is called
[2025-04-20 13:09:38] 2025-04-20 11:09:24,460 | INFO     | number of running child processes to parent process 2356108: 1
[2025-04-20 13:09:38] 2025-04-20 11:09:24,461 | INFO     | maximum number of monitored processes: 6
[2025-04-20 13:09:38] 2025-04-20 11:09:24,461 | INFO     | aborting job monitoring since job object (job id=6606874324) has expired
[2025-04-20 13:09:38] 2025-04-20 11:09:24,906 | INFO     | --- collectZombieJob: --- 10, [2356108]
[2025-04-20 13:09:38] 2025-04-20 11:09:24,906 | INFO     | zombie collector waiting for pid 2356108
[2025-04-20 13:09:38] 2025-04-20 11:09:24,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 13:09:38] 2025-04-20 11:09:24,906 | INFO     | collected zombie processes
[2025-04-20 13:09:38] 2025-04-20 11:09:24,909 | INFO     | will attempt to kill all subprocesses of pid=2356108
[2025-04-20 13:09:38] 2025-04-20 11:09:26,397 | INFO     | PID=2342524 has CPU usage=22.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-20 13:09:38] 2025-04-20 11:09:26,397 | INFO     | .. there are 23 such processes running
[2025-04-20 13:09:38] 2025-04-20 11:09:26,465 | INFO     | process IDs to be killed: [2356108] (in reverse order)
[2025-04-20 13:09:38] 2025-04-20 11:09:26,694 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 13:09:38] 2025-04-20 11:09:26,694 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 13:09:38] 2025-04-20 11:09:26,715 | INFO     | did not find any defunct processes belonging to 2356108
[2025-04-20 13:09:38] 2025-04-20 11:09:26,730 | INFO     | did not find any defunct processes belonging to 2356108
[2025-04-20 13:09:38] 2025-04-20 11:09:26,731 | INFO     | ready for new job
[2025-04-20 13:09:38] 2025-04-20 11:09:26,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 13:09:38] 2025-04-20 11:09:26,733 | INFO     | **************************************
[2025-04-20 13:09:38] 2025-04-20 11:09:26,733 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 13:09:38] 2025-04-20 11:09:26,733 | INFO     | **************************************
[2025-04-20 13:09:38] 2025-04-20 11:09:26,733 | INFO     | 
[2025-04-20 13:09:38] 2025-04-20 11:09:26,741 | INFO     | architecture information:
[2025-04-20 13:09:38] 2025-04-20 11:09:26,742 | INFO     | executing command: cat /etc/os-release
[2025-04-20 13:09:38] 2025-04-20 11:09:26,762 | INFO     | cat /etc/os-release:
[2025-04-20 13:09:38] NAME="CentOS Linux"
[2025-04-20 13:09:38] VERSION="7 (Core)"
[2025-04-20 13:09:38] ID="centos"
[2025-04-20 13:09:38] ID_LIKE="rhel fedora"
[2025-04-20 13:09:38] VERSION_ID="7"
[2025-04-20 13:09:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 13:09:38] ANSI_COLOR="0;31"
[2025-04-20 13:09:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 13:09:38] HOME_URL="https://www.centos.org/"
[2025-04-20 13:09:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 13:09:38] 
[2025-04-20 13:09:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 13:09:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 13:09:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 13:09:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 13:09:38] 
[2025-04-20 13:09:38] 2025-04-20 11:09:26,763 | INFO     | **************************************
[2025-04-20 13:09:38] 2025-04-20 11:09:27,265 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-04-20 13:09:38] 2025-04-20 11:09:27,287 | INFO     | sufficient remaining disk space (3325263085568 B)
[2025-04-20 13:09:38] 2025-04-20 11:09:27,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 13:09:38] 2025-04-20 11:09:27,287 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 13:09:38] 2025-04-20 11:09:27,287 | INFO     | update_server=False
[2025-04-20 13:09:38] 2025-04-20 11:09:27,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 13:09:38] 2025-04-20 11:09:27,288 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 13:09:38] 2025-04-20 11:09:27,288 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 13:09:38] 2025-04-20 11:09:27,288 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 13:09:38] 2025-04-20 11:09:27,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 13:09:38] 2025-04-20 11:09:27,794 | INFO     | all payload control threads have been joined
[2025-04-20 13:09:38] 2025-04-20 11:09:27,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 13:09:38] 2025-04-20 11:09:27,969 | INFO     | aborting loop
[2025-04-20 13:09:38] 2025-04-20 11:09:28,293 | INFO     | [job] retrieve thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:28,296 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:28,299 | INFO     | all data control threads have been joined
[2025-04-20 13:09:38] 2025-04-20 11:09:28,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 13:09:38] 2025-04-20 11:09:28,365 | INFO     | [payload] failed_post thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:28,478 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:28,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 13:09:38] 2025-04-20 11:09:28,598 | INFO     | all job control threads have been joined
[2025-04-20 13:09:38] 2025-04-20 11:09:28,679 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:28,799 | INFO     | [payload] control thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:28,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 13:09:38] 2025-04-20 11:09:28,975 | INFO     | [job] job monitor thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:29,061 | INFO     | [job] validate thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:29,065 | INFO     | [data] copytool_in thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:29,306 | INFO     | [data] control thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:29,392 | INFO     | [payload] validate_post thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:29,480 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:29,603 | INFO     | [job] control thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:29,874 | INFO     | [job] queue monitor thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:30,372 | INFO     | [data] copytool_out thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:32,526 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 13:09:38] 2025-04-20 11:09:33,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22861928073024)>', '<ExcThread(monitor, started 22861691455232)>']
[2025-04-20 13:09:38] 2025-04-20 11:09:33,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 13:09:38] 2025-04-20 11:09:33,319 | INFO     | [monitor] control thread has ended
[2025-04-20 13:09:38] 2025-04-20 11:09:38,105 | INFO     | all workflow threads have been joined
[2025-04-20 13:09:38] 2025-04-20 11:09:38,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 13:09:38] 2025-04-20 11:09:38,105 | INFO     | traces error code: 0
[2025-04-20 13:09:38] 2025-04-20 11:09:38,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 13:09:38] 2025-04-20 11:09:38,253 [wrapper] ==== pilot stdout END ====
[2025-04-20 13:09:38] 2025-04-20 11:09:38,257 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 13:09:38] 2025-04-20 11:09:38,261 [wrapper] pilotpid: 2342524
[2025-04-20 13:09:38] 2025-04-20 11:09:38,264 [wrapper] Pilot exit status: 0
[2025-04-20 13:09:38] 2025-04-20 11:09:38,278 [wrapper] pandaids: 6606874324
[2025-04-20 13:09:38] 2025-04-20 11:09:38,402 [wrapper] cleanup supervisor_pilot 3215326 2342525
[2025-04-20 13:09:38] 2025-04-20 11:09:38,407 [wrapper] Test setup, not cleaning
[2025-04-20 13:09:38] 2025-04-20 11:09:38,411 [wrapper] apfmon messages muted
[2025-04-20 13:09:38] 2025-04-20 11:09:38,415 [wrapper] ==== wrapper stdout END ====
[2025-04-20 13:09:38] 2025-04-20 11:09:38,419 [wrapper] ==== wrapper stderr END ====
[2025-04-20 13:09:38]  *** Error codes and diagnostics ***
[2025-04-20 13:09:38]     "exeErrorCode": 0,
[2025-04-20 13:09:38]     "exeErrorDiag": "",
[2025-04-20 13:09:38]     "pilotErrorCode": 0,
[2025-04-20 13:09:38]     "pilotErrorDiag": "",
[2025-04-20 13:09:38]  *** Listing of results directory ***
[2025-04-20 13:09:38] total 416348
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc    495897 Apr 18 22:23 pilot3.tar.gz
[2025-04-20 13:09:38] -rwx------ 1 boinc boinc     37140 Apr 18 22:27 runpilot2-wrapper.sh
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc      5111 Apr 18 22:27 queuedata.json
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc       100 Apr 20 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 13:09:38] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 11:07 run_atlas
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc       105 Apr 20 11:07 job.xml
[2025-04-20 13:09:38] -rw-r--r-- 2 boinc boinc 225797171 Apr 20 11:07 EVNT.44075481._002862.pool.root.1
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc      6678 Apr 20 11:07 init_data.xml
[2025-04-20 13:09:38] -rw-r--r-- 2 boinc boinc    508889 Apr 20 11:07 input.tar.gz
[2025-04-20 13:09:38] -rw-r--r-- 2 boinc boinc     17569 Apr 20 11:07 start_atlas.sh
[2025-04-20 13:09:38] drwxrwx--x 2 boinc boinc      4096 Apr 20 11:07 shared
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc         0 Apr 20 11:07 boinc_lockfile
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc      2578 Apr 20 11:07 pandaJob.out
[2025-04-20 13:09:38] -rw------- 1 boinc boinc       424 Apr 20 11:07 setup.sh.local
[2025-04-20 13:09:38] -rw------- 1 boinc boinc    991300 Apr 20 11:07 agis_schedconf.cvmfs.json
[2025-04-20 13:09:38] -rw------- 1 boinc boinc   1618536 Apr 20 11:07 agis_ddmendpoints.agis.ALL.json
[2025-04-20 13:09:38] drwx------ 4 boinc boinc      4096 Apr 20 11:07 pilot3
[2025-04-20 13:09:38] -rw------- 1 boinc boinc 194744032 Apr 20 13:08 HITS.44075483._073709.pool.root.1
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc       529 Apr 20 13:08 boinc_task_state.xml
[2025-04-20 13:09:38] -rw------- 1 boinc boinc      1026 Apr 20 13:09 memory_monitor_summary.json
[2025-04-20 13:09:38] -rw------- 1 boinc boinc    272705 Apr 20 13:09 log.44075483._073709.job.log.tgz.1
[2025-04-20 13:09:38] -rw------- 1 boinc boinc        95 Apr 20 13:09 pilot_heartbeat.json
[2025-04-20 13:09:38] -rw------- 1 boinc boinc      7692 Apr 20 13:09 heartbeat.json
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc      8192 Apr 20 13:09 boinc_mmap_file
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc        27 Apr 20 13:09 wrapper_checkpoint.txt
[2025-04-20 13:09:38] -rw------- 1 boinc boinc      4488 Apr 20 13:09 pilotlog.txt
[2025-04-20 13:09:38] -rw------- 1 boinc boinc    690746 Apr 20 13:09 log.44075483._073709.job.log.1
[2025-04-20 13:09:38] -rw------- 1 boinc boinc       357 Apr 20 13:09 output.list
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc       620 Apr 20 13:09 runtime_log
[2025-04-20 13:09:38] -rw------- 1 boinc boinc    983040 Apr 20 13:09 result.tar.gz
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc     11442 Apr 20 13:09 runtime_log.err
[2025-04-20 13:09:38] -rw------- 1 boinc boinc       662 Apr 20 13:09 novNDmbU7P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmf6fLDmZFHpum.diag
[2025-04-20 13:09:38] -rw-r--r-- 1 boinc boinc     21172 Apr 20 13:09 stderr.txt
[2025-04-20 13:09:38] HITS file was successfully produced:
[2025-04-20 13:09:38] -rw------- 1 boinc boinc 194744032 Apr 20 13:08 shared/HITS.pool.root.1
[2025-04-20 13:09:38]  *** Contents of shared directory: ***
[2025-04-20 13:09:38] total 412176
[2025-04-20 13:09:38] -rw-r--r-- 2 boinc boinc 225797171 Apr 20 11:07 ATLAS.root_0
[2025-04-20 13:09:38] -rw-r--r-- 2 boinc boinc    508889 Apr 20 11:07 input.tar.gz
[2025-04-20 13:09:38] -rw-r--r-- 2 boinc boinc     17569 Apr 20 11:07 start_atlas.sh
[2025-04-20 13:09:38] -rw------- 1 boinc boinc 194744032 Apr 20 13:08 HITS.pool.root.1
[2025-04-20 13:09:38] -rw------- 1 boinc boinc    983040 Apr 20 13:09 result.tar.gz
13:09:39 (2338526): run_atlas exited; CPU time 26243.983950
13:09:39 (2338526): called boinc_finish(0)

</stderr_txt>
]]>

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