Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 08:47:59 (9128): Detected: vboxwrapper 26206
2025-04-19 08:47:59 (9128): Detected: BOINC client v7.16.20
2025-04-19 08:48:00 (9128): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-04-19 08:48:00 (9128): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 08:48:01 (9128): Create VM. (boinc_ef59cfcd3031085e, slot#2)
2025-04-19 08:48:01 (9128): Setting Memory Size for VM. (4700MB)
2025-04-19 08:48:01 (9128): Setting CPU Count for VM. (7)
2025-04-19 08:48:02 (9128): Setting Chipset Options for VM.
2025-04-19 08:48:02 (9128): Setting Graphics Controller Options for VM.
2025-04-19 08:48:02 (9128): Setting Boot Options for VM.
2025-04-19 08:48:03 (9128): Setting Network Configuration for NAT.
2025-04-19 08:48:03 (9128): Enabling VM Network Access.
2025-04-19 08:48:03 (9128): Disabling USB Support for VM.
2025-04-19 08:48:03 (9128): Disabling COM Port Support for VM.
2025-04-19 08:48:04 (9128): Disabling LPT Port Support for VM.
2025-04-19 08:48:04 (9128): Disabling Audio Support for VM.
2025-04-19 08:48:04 (9128): Disabling Clipboard Support for VM.
2025-04-19 08:48:04 (9128): Disabling Drag and Drop Support for VM.
2025-04-19 08:48:05 (9128): Adding storage controller(s) to VM.
2025-04-19 08:48:05 (9128): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 08:48:05 (9128): Adding VirtualBox Guest Additions to VM.
2025-04-19 08:48:06 (9128): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 08:48:06 (9128): forwarding host port 56176 to guest port 80
2025-04-19 08:48:06 (9128): Enabling remote desktop for VM.
2025-04-19 08:48:06 (9128): Required extension pack not installed, remote desktop not enabled.
2025-04-19 08:48:06 (9128): Enabling shared directory for VM.
2025-04-19 08:48:07 (9128): Starting VM using VBoxManage interface. (boinc_ef59cfcd3031085e, slot#2)
2025-04-19 08:48:11 (9128): Successfully started VM. (PID = '2112')
2025-04-19 08:48:11 (9128): Reporting VM Process ID to BOINC.
2025-04-19 08:48:11 (9128): Guest Log: BIOS: VirtualBox 6.1.50
2025-04-19 08:48:11 (9128): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 08:48:11 (9128): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 08:48:11 (9128): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 08:48:11 (9128): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 08:48:11 (9128): Detected: Web Application Enabled (http://localhost:56176)
2025-04-19 08:48:11 (9128): Preference change detected
2025-04-19 08:48:11 (9128): Setting CPU throttle for VM. (100%)
2025-04-19 08:48:11 (9128): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 80 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 08:48:13 (9128): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 08:48:13 (9128): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 08:48:16 (9128): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 08:48:16 (9128): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 08:48:16 (9128): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 08:49:02 (9128): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 08:49:02 (9128): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 08:49:07 (9128): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 08:49:07 (9128): Guest Log: 00:00:00.000116 main     Log opened 2025-04-19T08:49:05.731751000Z
2025-04-19 08:49:07 (9128): Guest Log: 00:00:00.000184 main     OS Product: Linux
2025-04-19 08:49:07 (9128): Guest Log: 00:00:00.000210 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 08:49:07 (9128): Guest Log: 00:00:00.000229 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 08:49:07 (9128): Guest Log: 00:00:00.000252 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 08:49:07 (9128): Guest Log: 00:00:00.000253 main     Process ID: 1349
2025-04-19 08:49:07 (9128): Guest Log: 00:00:00.000253 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 08:49:07 (9128): Guest Log: 00:00:00.000915 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 08:49:07 (9128): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 08:49:07 (9128): Guest Log: [INFO] Mounting shared directory
2025-04-19 08:49:07 (9128): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 08:49:10 (9128): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 08:49:10 (9128): Guest Log: [INFO] Detected branch: prod
2025-04-19 08:49:10 (9128): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 08:49:10 (9128): Guest Log: Copying input files
2025-04-19 08:49:10 (9128): Guest Log: Copied input files into RunAtlas.
2025-04-19 08:49:10 (9128): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 08:49:10 (9128): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 08:49:10 (9128): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 08:49:10 (9128): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 08:49:17 (9128): Guest Log: 00:00:10.012273 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 234 272 302 000ns (GuestNow=1 745 045 311 461 278 000 ns GuestLast=1 745 052 545 733 580 000 ns fSetTimeLastLoop=true )
2025-04-19 08:49:17 (9128): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 08:49:18 (9128): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 08:49:18 (9128): Guest Log: 2.6.3.0 1626 0 30200 145029 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 08:49:19 (9128): Guest Log: copied the webapp to /var/www
2025-04-19 08:49:19 (9128): Guest Log: ATHENA_PROC_NUMBER=7
2025-04-19 08:49:19 (9128): Guest Log: ATHENA_CORE_NUMBER=7
2025-04-19 08:49:19 (9128): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 08:49:19 (9128): Guest Log:  *** Starting ATLAS job. (PandaID=6606652274 taskID=44075483) ***
2025-04-19 10:06:53 (9128): Guest Log:  *** Job finished ***
2025-04-19 10:06:53 (9128): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:05:55,735 | INFO     | [data] queue_monitor thread has finished
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:02,090 | INFO     | job.realtimelogging is not enabled
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:03,095 | INFO     | [payload] run_realtimelog thread has finished
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:03,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680988739392)>', '<ExcThread(monitor, started 139680095913728)>']
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:04,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:04,406 | INFO     | [monitor] control thread has ended
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,522 | INFO     | all workflow threads have been joined
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,522 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,522 | INFO     | traces error code: 0
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,576 [wrapper] ==== pilot stdout END ====
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,579 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,583 [wrapper] pilotpid: 5957
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,586 [wrapper] Pilot exit status: 0
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,663 [wrapper] pandaids: 6606652274
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,686 [wrapper] cleanup supervisor_pilot   764 5958
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,689 [wrapper] Test setup, not cleaning
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,693 [wrapper] apfmon messages muted
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,696 [wrapper] ==== wrapper stdout END ====
2025-04-19 10:06:53 (9128): Guest Log: 2025-04-19 08:06:08,699 [wrapper] ==== wrapper stderr END ====
2025-04-19 10:06:53 (9128): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 10:06:53 (9128): Guest Log:     "exeErrorCode": 0,
2025-04-19 10:06:53 (9128): Guest Log:     "exeErrorDiag": "",
2025-04-19 10:06:53 (9128): Guest Log:     "pilotErrorCode": 0,
2025-04-19 10:06:53 (9128): Guest Log:     "pilotErrorDiag": "",
2025-04-19 10:06:53 (9128): Guest Log:  *** Listing of results directory ***
2025-04-19 10:06:53 (9128): Guest Log: total 190924
2025-04-19 10:06:53 (9128): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 18 15:45 pilot3.tar.gz
2025-04-19 10:06:53 (9128): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 18 15:56 runpilot2-wrapper.sh
2025-04-19 10:06:53 (9128): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 18 15:56 queuedata.json
2025-04-19 10:06:53 (9128): Guest Log: -rwxr-xr-x. 1 atlas atlas      8774 Apr 19 06:48 init_data.xml
2025-04-19 10:06:53 (9128): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 19 06:48 start_atlas.sh
2025-04-19 10:06:53 (9128): Guest Log: -rwxr-xr-x. 1 atlas atlas    508888 Apr 19 06:48 input.tar.gz
2025-04-19 10:06:53 (9128): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 06:48 EVNT.44075481._002763.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 10:06:53 (9128): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 19 06:48 pandaJob.out
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 06:48 setup.sh.local
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 19 06:49 agis_schedconf.cvmfs.json
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 06:49 agis_ddmendpoints.agis.ALL.json
2025-04-19 10:06:53 (9128): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 06:49 pilot3
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 08:04 pilot_heartbeat.json
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas 190311022 Apr 19 08:05 HITS.44075483._071138.pool.root.1
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 19 08:05 memory_monitor_summary.json
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas    276899 Apr 19 08:05 log.44075483._071138.job.log.tgz.1
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas      7712 Apr 19 08:05 heartbeat.json
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 19 08:06 pilotlog.txt
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas    424000 Apr 19 08:06 log.44075483._071138.job.log.1
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 08:06 output.list
2025-04-19 10:06:53 (9128): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 08:06 runtime_log
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas    716800 Apr 19 08:06 result.tar.gz
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas       651 Apr 19 08:06 ry6KDm4F3P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHefLDm22r2Ln.diag
2025-04-19 10:06:53 (9128): Guest Log: -rw-r--r--. 1 atlas atlas     10935 Apr 19 08:06 runtime_log.err
2025-04-19 10:06:53 (9128): Guest Log: Looking for outputfile HITS.44075483._071138.pool.root.1
2025-04-19 10:06:53 (9128): Guest Log: HITS file was successfully produced
2025-04-19 10:06:53 (9128): Guest Log: -rw-------. 1 atlas atlas 190311022 Apr 19 08:05 /home/atlas/RunAtlas/HITS.44075483._071138.pool.root.1
2025-04-19 10:06:54 (9128): Guest Log: Successfully finished the ATLAS job!
2025-04-19 10:06:54 (9128): Guest Log: Copying the results back to the shared directory!
2025-04-19 10:06:54 (9128): Guest Log:  *** Contents of shared directory: ***
2025-04-19 10:06:54 (9128): Guest Log: total 404892
2025-04-19 10:06:54 (9128): Guest Log: -rwxrwxrwx. 1 root root 223032207 Apr 19 06:47 ATLAS.root_0
2025-04-19 10:06:54 (9128): Guest Log: -rwxrwxrwx. 1 root root 190311022 Apr 19  2025 HITS.pool.root.1
2025-04-19 10:06:54 (9128): Guest Log: -rwxrwxrwx. 1 root root      8774 Apr 19 06:47 init_data.xml
2025-04-19 10:06:54 (9128): Guest Log: -rwxrwxrwx. 1 root root    508888 Apr 18 22:58 input.tar.gz
2025-04-19 10:06:54 (9128): Guest Log: -rwxrwxrwx. 1 root root    716800 Apr 19  2025 result.tar.gz
2025-04-19 10:06:54 (9128): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 22:58 start_atlas.sh
2025-04-19 10:06:54 (9128): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 10:06:54 (9128): VM Completion File Detected.
2025-04-19 10:06:54 (9128): Powering off VM.
2025-04-19 10:06:55 (9128): Successfully stopped VM.
2025-04-19 10:06:55 (9128): Deregistering VM. (boinc_ef59cfcd3031085e, slot#2)
2025-04-19 10:06:55 (9128): Removing network bandwidth throttle group from VM.
2025-04-19 10:06:55 (9128): Removing VM from VirtualBox.
10:07:00 (9128): called boinc_finish(0)

</stderr_txt>
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