Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:22:50 (1881893): wrapper (7.7.26015): starting
10:22:50 (1881893): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 10:22:50] Arguments: --nthreads 4
[2025-04-19 10:22:50] Threads: 4
[2025-04-19 10:22:50] Checking for CVMFS
[2025-04-19 10:22:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 10:22:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 10:22:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 10:22:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 10:22:51] 2.9.2.0 2952 5703 97008 145031 2 55 24963873 36864000 0 130560 0 4782750 99.992 1368329 8234 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 10:22:51] CVMFS is ok
[2025-04-19 10:22:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 10:22:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 10:22:51] Further information can be found at the LHC@home message board.
[2025-04-19 10:22:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 10:22:51] Checking for apptainer binary...
[2025-04-19 10:22:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 10:22:51] Running /usr/bin/apptainer --version
[2025-04-19 10:22:51] apptainer version 1.3.6-6.1
[2025-04-19 10:22:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 10:22:51] thA383a
[2025-04-19 10:22:51] apptainer works
[2025-04-19 10:22:51] Set ATHENA_PROC_NUMBER=4
[2025-04-19 10:22:51] Set ATHENA_CORE_NUMBER=4
[2025-04-19 10:22:51] Starting ATLAS job with PandaID=6606785626
[2025-04-19 10:22:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:40:40]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:40:40]  filetype=log
[2025-04-19 11:40:40]  guid=674b6b5d-c0d5-4286-86bf-5f4291fce303
[2025-04-19 11:40:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 11:40:40]  is_altstaged=None
[2025-04-19 11:40:40]  is_tar=False
[2025-04-19 11:40:40]  lfn=log.44075483._073608.job.log.tgz.1
[2025-04-19 11:40:40]  mtime=0
[2025-04-19 11:40:40]  protocol_id=None
[2025-04-19 11:40:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 11:40:40]  replicas=None
[2025-04-19 11:40:40]  scope=mc23_13p6TeV
[2025-04-19 11:40:40]  status=None
[2025-04-19 11:40:40]  status_code=0
[2025-04-19 11:40:40]  storage_token=
[2025-04-19 11:40:40]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606785626/log.44075483._073608.job.log.tgz.1
[2025-04-19 11:40:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/46/log.44075483._073608.job.log.tgz.1
[2025-04-19 11:40:40]  workdir=None
[2025-04-19 11:40:40] ]
[2025-04-19 11:40:40] 2025-04-19 09:40:13,858 | INFO     | transferring file log.44075483._073608.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606785626/log.44075483._073608.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 11:40:40] 2025-04-19 09:40:13,858 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606785626/log.44075483._073608.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0736
[2025-04-19 11:40:40] 2025-04-19 09:40:13,877 | INFO     | adding to output.list: log.44075483._073608.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/46/log.44075483._073608.job.log.tg
[2025-04-19 11:40:40] 2025-04-19 09:40:13,878 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 11:40:40] 2025-04-19 09:40:13,878 | INFO     | summary of transferred files:
[2025-04-19 11:40:40] 2025-04-19 09:40:13,878 | INFO     |  -- lfn=log.44075483._073608.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 11:40:40] 2025-04-19 09:40:13,878 | INFO     | stage-out finished correctly
[2025-04-19 11:40:40] 2025-04-19 09:40:14,777 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 11:40:40] 2025-04-19 09:40:15,683 | INFO     | job 6606785626 has state=finished
[2025-04-19 11:40:40] 2025-04-19 09:40:15,683 | INFO     | preparing for final server update for job 6606785626 in state='finished'
[2025-04-19 11:40:40] 2025-04-19 09:40:15,684 | INFO     | this job has now completed (state=finished)
[2025-04-19 11:40:40] 2025-04-19 09:40:15,684 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 11:40:40] 2025-04-19 09:40:15,684 | INFO     | log transfer has been attempted: DONE
[2025-04-19 11:40:40] 2025-04-19 09:40:15,684 | INFO     | job 6606785626 has finished - writing final server update
[2025-04-19 11:40:40] 2025-04-19 09:40:15,684 | INFO     | total number of processed events: 400 (read)
[2025-04-19 11:40:40] 2025-04-19 09:40:15,686 | INFO     | executing command: lscpu
[2025-04-19 11:40:40] 2025-04-19 09:40:15,709 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 11:40:40] 2025-04-19 09:40:19,074 | WARNING  | process 1892189 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 11:40:40] 2025-04-19 09:40:19,074 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606785626/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 11:40:40] 2025-04-19 09:40:19,116 | INFO     | number of running child processes to parent process 1892189: 1
[2025-04-19 11:40:40] 2025-04-19 09:40:19,116 | INFO     | maximum number of monitored processes: 6
[2025-04-19 11:40:40] 2025-04-19 09:40:20,572 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 11:40:40] 2025-04-19 09:40:20,572 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606785626/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 11:40:40] 2025-04-19 09:40:20,573 | INFO     | extracted standard info from prmon json
[2025-04-19 11:40:40] 2025-04-19 09:40:20,573 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 11:40:40] 2025-04-19 09:40:20,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 11:40:40] 2025-04-19 09:40:20,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 11:40:40] 2025-04-19 09:40:20,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | fitting pss+swap vs Time
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | sum of square deviations: 101843770.0
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | sum of deviations: 3797928076.0
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | mean x: 1745053381.0
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | mean y: 2458345.7101449277
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | -- intersect: -65073561815.54886
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | intersect: -65073561815.54886
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | chi2: 1.0906594054227208
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | -- intersect: -65073561815.54886
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | current memory leak: 37.29 B/s (using 69 data points, chi2=1.09)
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | ..............................
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | . Timing measurements:
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | . get job = 0 s
[2025-04-19 11:40:40] 2025-04-19 09:40:20,574 | INFO     | . initial setup = 1 s
[2025-04-19 11:40:40] 2025-04-19 09:40:20,575 | INFO     | . payload setup = 4 s
[2025-04-19 11:40:40] 2025-04-19 09:40:20,575 | INFO     | . stage-in = 0 s
[2025-04-19 11:40:40] 2025-04-19 09:40:20,575 | INFO     | . payload execution = 4612 s
[2025-04-19 11:40:40] 2025-04-19 09:40:20,575 | INFO     | . stage-out = 0 s
[2025-04-19 11:40:40] 2025-04-19 09:40:20,575 | INFO     | . log creation = 0 s
[2025-04-19 11:40:40] 2025-04-19 09:40:20,575 | INFO     | ..............................
[2025-04-19 11:40:40] 2025-04-19 09:40:21,021 | INFO     | 
[2025-04-19 11:40:40] 2025-04-19 09:40:21,021 | INFO     | job summary report
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | --------------------------------------------------
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | PanDA job id: 6606785626
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | task id: 44075483
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | errors: (none)
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | pilot state: finished 
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | transexitcode: 0
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | exeerrorcode: 0
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | exeerrordiag: 
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | exitcode: 0
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | exitmsg: OK
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | cpuconsumptiontime: 15666 s
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | nevents: 400
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | neventsw: 0
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | pid: 1892189
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | pgrp: 1892189
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | corecount: 4
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | event service: False
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | sizes: {0: 2426826, 4: 2427032, 11: 2427060, 4620: 2453266, 4621: 2462213, 4622: 2462269, 4627: 2462567}
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | --------------------------------------------------
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | 
[2025-04-19 11:40:40] 2025-04-19 09:40:21,022 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 11:40:40] 2025-04-19 09:40:21,042 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | job 6606785626 has completed (purged errors)
[2025-04-19 11:40:40] 2025-04-19 09:40:21,043 | INFO     | overall cleanup function is called
[2025-04-19 11:40:40] 2025-04-19 09:40:22,050 | INFO     | --- collectZombieJob: --- 10, [1892189]
[2025-04-19 11:40:40] 2025-04-19 09:40:22,051 | INFO     | zombie collector waiting for pid 1892189
[2025-04-19 11:40:40] 2025-04-19 09:40:22,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:40:40] 2025-04-19 09:40:22,051 | INFO     | collected zombie processes
[2025-04-19 11:40:40] 2025-04-19 09:40:22,051 | INFO     | will attempt to kill all subprocesses of pid=1892189
[2025-04-19 11:40:40] 2025-04-19 09:40:22,095 | INFO     | process IDs to be killed: [1892189] (in reverse order)
[2025-04-19 11:40:40] 2025-04-19 09:40:22,130 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:40:40] 2025-04-19 09:40:22,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:40:40] 2025-04-19 09:40:22,132 | INFO     | did not find any defunct processes belonging to 1892189
[2025-04-19 11:40:40] 2025-04-19 09:40:22,133 | INFO     | did not find any defunct processes belonging to 1892189
[2025-04-19 11:40:40] 2025-04-19 09:40:22,133 | INFO     | ready for new job
[2025-04-19 11:40:40] 2025-04-19 09:40:22,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:40:40] 2025-04-19 09:40:22,134 | INFO     | **************************************
[2025-04-19 11:40:40] 2025-04-19 09:40:22,134 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:40:40] 2025-04-19 09:40:22,134 | INFO     | **************************************
[2025-04-19 11:40:40] 2025-04-19 09:40:22,134 | INFO     | 
[2025-04-19 11:40:40] 2025-04-19 09:40:22,134 | INFO     | architecture information:
[2025-04-19 11:40:40] 2025-04-19 09:40:22,135 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:40:40] 2025-04-19 09:40:22,149 | INFO     | cat /etc/os-release:
[2025-04-19 11:40:40] NAME="CentOS Linux"
[2025-04-19 11:40:40] VERSION="7 (Core)"
[2025-04-19 11:40:40] ID="centos"
[2025-04-19 11:40:40] ID_LIKE="rhel fedora"
[2025-04-19 11:40:40] VERSION_ID="7"
[2025-04-19 11:40:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:40:40] ANSI_COLOR="0;31"
[2025-04-19 11:40:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:40:40] HOME_URL="https://www.centos.org/"
[2025-04-19 11:40:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:40:40] 
[2025-04-19 11:40:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:40:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:40:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:40:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:40:40] 
[2025-04-19 11:40:40] 2025-04-19 09:40:22,149 | INFO     | **************************************
[2025-04-19 11:40:40] 2025-04-19 09:40:22,652 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 11:40:40] 2025-04-19 09:40:22,669 | INFO     | sufficient remaining disk space (229927550976 B)
[2025-04-19 11:40:40] 2025-04-19 09:40:22,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:40:40] 2025-04-19 09:40:22,669 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:40:40] 2025-04-19 09:40:22,670 | INFO     | update_server=False
[2025-04-19 11:40:40] 2025-04-19 09:40:22,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:40:40] 2025-04-19 09:40:22,670 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 11:40:40] 2025-04-19 09:40:22,670 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:40:40] 2025-04-19 09:40:22,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:40:40] 2025-04-19 09:40:22,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:40:40] 2025-04-19 09:40:22,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:40:40] 2025-04-19 09:40:22,670 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:40:40] 2025-04-19 09:40:22,670 | INFO     | aborting loop
[2025-04-19 11:40:40] 2025-04-19 09:40:22,727 | INFO     | all payload control threads have been joined
[2025-04-19 11:40:40] 2025-04-19 09:40:23,383 | INFO     | all data control threads have been joined
[2025-04-19 11:40:40] 2025-04-19 09:40:23,607 | INFO     | all job control threads have been joined
[2025-04-19 11:40:40] 2025-04-19 09:40:23,673 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:23,673 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:23,720 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:23,732 | INFO     | [payload] control thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:23,788 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:24,120 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:24,309 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:24,389 | INFO     | [data] control thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:24,443 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:24,609 | INFO     | [job] control thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:24,675 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:24,984 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:24,990 | INFO     | [job] validate thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:25,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:40:40] 2025-04-19 09:40:25,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:40:40] 2025-04-19 09:40:26,633 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:29,334 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:33,494 | INFO     | job.realtimelogging is not enabled
[2025-04-19 11:40:40] 2025-04-19 09:40:34,499 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:40:40] 2025-04-19 09:40:35,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139751596803904)>', '<ExcThread(monitor, started 139750577006336)>']
[2025-04-19 11:40:40] 2025-04-19 09:40:35,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:40:40] 2025-04-19 09:40:35,740 | INFO     | [monitor] control thread has ended
[2025-04-19 11:40:40] 2025-04-19 09:40:40,522 | INFO     | all workflow threads have been joined
[2025-04-19 11:40:40] 2025-04-19 09:40:40,523 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:40:40] 2025-04-19 09:40:40,523 | INFO     | traces error code: 0
[2025-04-19 11:40:40] 2025-04-19 09:40:40,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:40:40] 2025-04-19 09:40:40,600 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:40:40] 2025-04-19 09:40:40,605 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:40:40] 2025-04-19 09:40:40,609 [wrapper] pilotpid: 1885609
[2025-04-19 11:40:40] 2025-04-19 09:40:40,613 [wrapper] Pilot exit status: 0
[2025-04-19 11:40:40] 2025-04-19 09:40:40,626 [wrapper] pandaids: 6606785626
[2025-04-19 11:40:40] 2025-04-19 09:40:40,649 [wrapper] cleanup supervisor_pilot 1904467 1885610
[2025-04-19 11:40:40] 2025-04-19 09:40:40,653 [wrapper] Test setup, not cleaning
[2025-04-19 11:40:40] 2025-04-19 09:40:40,657 [wrapper] apfmon messages muted
[2025-04-19 11:40:40] 2025-04-19 09:40:40,661 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:40:40] 2025-04-19 09:40:40,665 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:40:40]  *** Error codes and diagnostics ***
[2025-04-19 11:40:40]     "exeErrorCode": 0,
[2025-04-19 11:40:40]     "exeErrorDiag": "",
[2025-04-19 11:40:40]     "pilotErrorCode": 0,
[2025-04-19 11:40:40]     "pilotErrorDiag": "",
[2025-04-19 11:40:40]  *** Listing of results directory ***
[2025-04-19 11:40:40] total 408784
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc    495897 Apr 18 21:39 pilot3.tar.gz
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc      5111 Apr 18 21:53 queuedata.json
[2025-04-19 11:40:40] -rwx------ 1 boinc boinc     37140 Apr 18 21:55 runpilot2-wrapper.sh
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc       100 Apr 19 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:40:40] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 10:22 run_atlas
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc       105 Apr 19 10:22 job.xml
[2025-04-19 11:40:40] -rw-r--r-- 2 boinc boinc 222209592 Apr 19 10:22 EVNT.44075481._002859.pool.root.1
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc      6861 Apr 19 10:22 init_data.xml
[2025-04-19 11:40:40] drwxrwx--x 2 boinc boinc      4096 Apr 19 10:22 shared
[2025-04-19 11:40:40] -rw-r--r-- 2 boinc boinc    508888 Apr 19 10:22 input.tar.gz
[2025-04-19 11:40:40] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:22 start_atlas.sh
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc         0 Apr 19 10:22 boinc_lockfile
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc      2578 Apr 19 10:22 pandaJob.out
[2025-04-19 11:40:40] -rw------- 1 boinc boinc       424 Apr 19 10:22 setup.sh.local
[2025-04-19 11:40:40] -rw------- 1 boinc boinc    991300 Apr 19 10:22 agis_schedconf.cvmfs.json
[2025-04-19 11:40:40] -rw------- 1 boinc boinc   1618536 Apr 19 10:22 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:40:40] drwx------ 4 boinc boinc      4096 Apr 19 10:22 pilot3
[2025-04-19 11:40:40] -rw------- 1 boinc boinc        95 Apr 19 11:39 pilot_heartbeat.json
[2025-04-19 11:40:40] -rw------- 1 boinc boinc 191099240 Apr 19 11:39 HITS.44075483._073608.pool.root.1
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc       529 Apr 19 11:39 boinc_task_state.xml
[2025-04-19 11:40:40] -rw------- 1 boinc boinc      1024 Apr 19 11:40 memory_monitor_summary.json
[2025-04-19 11:40:40] -rw------- 1 boinc boinc    251476 Apr 19 11:40 log.44075483._073608.job.log.tgz.1
[2025-04-19 11:40:40] -rw------- 1 boinc boinc      7669 Apr 19 11:40 heartbeat.json
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc      8192 Apr 19 11:40 boinc_mmap_file
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc        27 Apr 19 11:40 wrapper_checkpoint.txt
[2025-04-19 11:40:40] -rw------- 1 boinc boinc      4552 Apr 19 11:40 pilotlog.txt
[2025-04-19 11:40:40] -rw------- 1 boinc boinc    454904 Apr 19 11:40 log.44075483._073608.job.log.1
[2025-04-19 11:40:40] -rw------- 1 boinc boinc       357 Apr 19 11:40 output.list
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc       620 Apr 19 11:40 runtime_log
[2025-04-19 11:40:40] -rw------- 1 boinc boinc    727040 Apr 19 11:40 result.tar.gz
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc     11104 Apr 19 11:40 runtime_log.err
[2025-04-19 11:40:40] -rw------- 1 boinc boinc       659 Apr 19 11:40 TVMLDmPz6P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm13fLDm4yCCfn.diag
[2025-04-19 11:40:40] -rw-r--r-- 1 boinc boinc     21193 Apr 19 11:40 stderr.txt
[2025-04-19 11:40:40] HITS file was successfully produced:
[2025-04-19 11:40:40] -rw------- 1 boinc boinc 191099240 Apr 19 11:39 shared/HITS.pool.root.1
[2025-04-19 11:40:40]  *** Contents of shared directory: ***
[2025-04-19 11:40:40] total 404864
[2025-04-19 11:40:40] -rw-r--r-- 2 boinc boinc 222209592 Apr 19 10:22 ATLAS.root_0
[2025-04-19 11:40:40] -rw-r--r-- 2 boinc boinc    508888 Apr 19 10:22 input.tar.gz
[2025-04-19 11:40:40] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:22 start_atlas.sh
[2025-04-19 11:40:40] -rw------- 1 boinc boinc 191099240 Apr 19 11:39 HITS.pool.root.1
[2025-04-19 11:40:40] -rw------- 1 boinc boinc    727040 Apr 19 11:40 result.tar.gz
11:40:42 (1881893): run_atlas exited; CPU time 15677.292898
11:40:42 (1881893): called boinc_finish(0)

</stderr_txt>
]]>

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