Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:44:22 (14606): wrapper (7.7.26015): starting
18:44:22 (14606): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 18:44:22] Arguments: --nthreads 12
[2025-04-18 18:44:22] Threads: 12
[2025-04-18 18:44:22] Checking for CVMFS
[2025-04-18 18:44:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 18:44:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 18:44:22] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 18:44:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 18:44:22] 2.11.2.0 12163 368130 163348 145018 1 57 19223584 20275200 1 130560 0 23218688 99.970 7300534 53541 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 18:44:22] CVMFS is ok
[2025-04-18 18:44:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 18:44:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 18:44:22] Further information can be found at the LHC@home message board.
[2025-04-18 18:44:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 18:44:22] Checking for apptainer binary...
[2025-04-18 18:44:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 18:44:22] Running /usr/bin/apptainer --version
[2025-04-18 18:44:22] apptainer version 1.3.2-1.el7
[2025-04-18 18:44:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 18:44:24] c-205-20.aglt2.org
[2025-04-18 18:44:24] apptainer works
[2025-04-18 18:44:24] Set ATHENA_PROC_NUMBER=12
[2025-04-18 18:44:24] Set ATHENA_CORE_NUMBER=12
[2025-04-18 18:44:24] Starting ATLAS job with PandaID=6604773998
[2025-04-18 18:44:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 20:09:37]  *** The last 200 lines of the pilot log: ***
[2025-04-18 20:09:37]  protocol_id=None
[2025-04-18 20:09:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 20:09:37]  replicas=None
[2025-04-18 20:09:37]  scope=mc23_13p6TeV
[2025-04-18 20:09:37]  status=None
[2025-04-18 20:09:37]  status_code=0
[2025-04-18 20:09:37]  storage_token=
[2025-04-18 20:09:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6604773998/log.44075483._048414.job.log.tgz.1
[2025-04-18 20:09:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/f1/log.44075483._048414.job.log.tgz.1
[2025-04-18 20:09:37]  workdir=None
[2025-04-18 20:09:37] ]
[2025-04-18 20:09:37] 2025-04-19 00:09:09,014 | INFO     | transferring file log.44075483._048414.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6604773998/log.44075483._048414.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 20:09:37] 2025-04-19 00:09:09,014 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6604773998/log.44075483._048414.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._048414.job
[2025-04-18 20:09:37] 2025-04-19 00:09:09,037 | INFO     | adding to output.list: log.44075483._048414.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/f1/log.44075483._048414.job.log.tg
[2025-04-18 20:09:37] 2025-04-19 00:09:09,038 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 20:09:37] 2025-04-19 00:09:09,039 | INFO     | summary of transferred files:
[2025-04-18 20:09:37] 2025-04-19 00:09:09,039 | INFO     |  -- lfn=log.44075483._048414.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 20:09:37] 2025-04-19 00:09:09,039 | INFO     | stage-out finished correctly
[2025-04-18 20:09:37] 2025-04-19 00:09:09,177 | WARNING  | process 24603 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 20:09:37] 2025-04-19 00:09:09,178 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6604773998/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 20:09:37] 2025-04-19 00:09:09,266 | INFO     | number of running child processes to parent process 24603: 1
[2025-04-18 20:09:37] 2025-04-19 00:09:09,266 | INFO     | maximum number of monitored processes: 6
[2025-04-18 20:09:37] 2025-04-19 00:09:11,776 | INFO     | monitor loop #379: job 0:6604773998 is in state 'finished'
[2025-04-18 20:09:37] 2025-04-19 00:09:11,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 20:09:37] 2025-04-19 00:09:11,838 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 20:09:37] 2025-04-19 00:09:12,531 | INFO     | job 6604773998 has state=finished
[2025-04-18 20:09:37] 2025-04-19 00:09:12,531 | INFO     | preparing for final server update for job 6604773998 in state='finished'
[2025-04-18 20:09:37] 2025-04-19 00:09:12,532 | INFO     | this job has now completed (state=finished)
[2025-04-18 20:09:37] 2025-04-19 00:09:12,532 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 20:09:37] 2025-04-19 00:09:12,532 | INFO     | log transfer has been attempted: DONE
[2025-04-18 20:09:37] 2025-04-19 00:09:12,532 | INFO     | job 6604773998 has finished - writing final server update
[2025-04-18 20:09:37] 2025-04-19 00:09:12,533 | INFO     | total number of processed events: 400 (read)
[2025-04-18 20:09:37] 2025-04-19 00:09:12,534 | INFO     | executing command: lscpu
[2025-04-18 20:09:37] 2025-04-19 00:09:12,564 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 20:09:37] 2025-04-19 00:09:14,279 | INFO     | monitor loop #380: job 0:6604773998 is in state 'finished'
[2025-04-18 20:09:37] 2025-04-19 00:09:14,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 20:09:37] 2025-04-19 00:09:14,845 | INFO     | PID=18203 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 20:09:37] 2025-04-19 00:09:16,788 | INFO     | monitor loop #381: job 0:6604773998 is in state 'finished'
[2025-04-18 20:09:37] 2025-04-19 00:09:16,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 20:09:37] 2025-04-19 00:09:17,232 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 20:09:37] 2025-04-19 00:09:17,233 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6604773998/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 20:09:37] 2025-04-19 00:09:17,234 | INFO     | extracted standard info from prmon json
[2025-04-18 20:09:37] 2025-04-19 00:09:17,234 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 20:09:37] 2025-04-19 00:09:17,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 20:09:37] 2025-04-19 00:09:17,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 20:09:37] 2025-04-19 00:09:17,235 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 20:09:37] 2025-04-19 00:09:17,237 | INFO     | fitting pss+swap vs Time
[2025-04-18 20:09:37] 2025-04-19 00:09:17,238 | INFO     | sum of square deviations: 136095575.0
[2025-04-18 20:09:37] 2025-04-19 00:09:17,238 | INFO     | sum of deviations: 17206117591.499996
[2025-04-18 20:09:37] 2025-04-19 00:09:17,238 | INFO     | mean x: 1745018898.5
[2025-04-18 20:09:37] 2025-04-19 00:09:17,238 | INFO     | mean y: 2607933.6710526315
[2025-04-18 20:09:37] 2025-04-19 00:09:17,239 | INFO     | -- intersect: -220614413354.35242
[2025-04-18 20:09:37] 2025-04-19 00:09:17,239 | INFO     | intersect: -220614413354.35242
[2025-04-18 20:09:37] 2025-04-19 00:09:17,239 | INFO     | chi2: 2.325997764661927
[2025-04-18 20:09:37] 2025-04-19 00:09:17,239 | INFO     | -- intersect: -220614413354.35242
[2025-04-18 20:09:37] 2025-04-19 00:09:17,239 | INFO     | current memory leak: 126.43 B/s (using 76 data points, chi2=2.33)
[2025-04-18 20:09:37] 2025-04-19 00:09:17,240 | INFO     | ..............................
[2025-04-18 20:09:37] 2025-04-19 00:09:17,240 | INFO     | . Timing measurements:
[2025-04-18 20:09:37] 2025-04-19 00:09:17,240 | INFO     | . get job = 0 s
[2025-04-18 20:09:37] 2025-04-19 00:09:17,240 | INFO     | . initial setup = 2 s
[2025-04-18 20:09:37] 2025-04-19 00:09:17,240 | INFO     | . payload setup = 7 s
[2025-04-18 20:09:37] 2025-04-19 00:09:17,240 | INFO     | . stage-in = 0 s
[2025-04-18 20:09:37] 2025-04-19 00:09:17,240 | INFO     | . payload execution = 5043 s
[2025-04-18 20:09:37] 2025-04-19 00:09:17,241 | INFO     | . stage-out = 0 s
[2025-04-18 20:09:37] 2025-04-19 00:09:17,241 | INFO     | . log creation = 0 s
[2025-04-18 20:09:37] 2025-04-19 00:09:17,241 | INFO     | ..............................
[2025-04-18 20:09:37] 2025-04-19 00:09:17,584 | INFO     | 
[2025-04-18 20:09:37] 2025-04-19 00:09:17,584 | INFO     | job summary report
[2025-04-18 20:09:37] 2025-04-19 00:09:17,585 | INFO     | --------------------------------------------------
[2025-04-18 20:09:37] 2025-04-19 00:09:17,585 | INFO     | PanDA job id: 6604773998
[2025-04-18 20:09:37] 2025-04-19 00:09:17,585 | INFO     | task id: 44075483
[2025-04-18 20:09:37] 2025-04-19 00:09:17,585 | INFO     | errors: (none)
[2025-04-18 20:09:37] 2025-04-19 00:09:17,585 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 20:09:37] 2025-04-19 00:09:17,585 | INFO     | pilot state: finished 
[2025-04-18 20:09:37] 2025-04-19 00:09:17,586 | INFO     | transexitcode: 0
[2025-04-18 20:09:37] 2025-04-19 00:09:17,586 | INFO     | exeerrorcode: 0
[2025-04-18 20:09:37] 2025-04-19 00:09:17,586 | INFO     | exeerrordiag: 
[2025-04-18 20:09:37] 2025-04-19 00:09:17,586 | INFO     | exitcode: 0
[2025-04-18 20:09:37] 2025-04-19 00:09:17,586 | INFO     | exitmsg: OK
[2025-04-18 20:09:37] 2025-04-19 00:09:17,586 | INFO     | cpuconsumptiontime: 46436 s
[2025-04-18 20:09:37] 2025-04-19 00:09:17,586 | INFO     | nevents: 400
[2025-04-18 20:09:37] 2025-04-19 00:09:17,587 | INFO     | neventsw: 0
[2025-04-18 20:09:37] 2025-04-19 00:09:17,587 | INFO     | pid: 24603
[2025-04-18 20:09:37] 2025-04-19 00:09:17,587 | INFO     | pgrp: 24603
[2025-04-18 20:09:37] 2025-04-19 00:09:17,587 | INFO     | corecount: 12
[2025-04-18 20:09:37] 2025-04-19 00:09:17,587 | INFO     | event service: False
[2025-04-18 20:09:37] 2025-04-19 00:09:17,587 | INFO     | sizes: {0: 2426546, 1: 2426801, 6: 2427007, 12: 2427035, 5055: 2453184, 5056: 2462125, 5059: 2462309, 5064: 2462479}
[2025-04-18 20:09:37] 2025-04-19 00:09:17,588 | INFO     | --------------------------------------------------
[2025-04-18 20:09:37] 2025-04-19 00:09:17,588 | INFO     | 
[2025-04-18 20:09:37] 2025-04-19 00:09:17,588 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 20:09:37] 2025-04-19 00:09:17,655 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,655 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,657 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,657 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,657 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,657 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,658 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 20:09:37] 2025-04-19 00:09:17,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,658 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 20:09:37] 2025-04-19 00:09:17,658 | INFO     | job 6604773998 has completed (purged errors)
[2025-04-18 20:09:37] 2025-04-19 00:09:17,658 | INFO     | overall cleanup function is called
[2025-04-18 20:09:37] 2025-04-19 00:09:18,666 | INFO     | --- collectZombieJob: --- 10, [24603]
[2025-04-18 20:09:37] 2025-04-19 00:09:18,667 | INFO     | zombie collector waiting for pid 24603
[2025-04-18 20:09:37] 2025-04-19 00:09:18,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 20:09:37] 2025-04-19 00:09:18,667 | INFO     | collected zombie processes
[2025-04-18 20:09:37] 2025-04-19 00:09:18,667 | INFO     | will attempt to kill all subprocesses of pid=24603
[2025-04-18 20:09:37] 2025-04-19 00:09:18,759 | INFO     | process IDs to be killed: [24603] (in reverse order)
[2025-04-18 20:09:37] 2025-04-19 00:09:18,810 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 20:09:37] 2025-04-19 00:09:18,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 20:09:37] 2025-04-19 00:09:18,814 | INFO     | did not find any defunct processes belonging to 24603
[2025-04-18 20:09:37] 2025-04-19 00:09:18,818 | INFO     | did not find any defunct processes belonging to 24603
[2025-04-18 20:09:37] 2025-04-19 00:09:18,818 | INFO     | ready for new job
[2025-04-18 20:09:37] 2025-04-19 00:09:18,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 20:09:37] 2025-04-19 00:09:18,819 | INFO     | **************************************
[2025-04-18 20:09:37] 2025-04-19 00:09:18,819 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 20:09:37] 2025-04-19 00:09:18,819 | INFO     | **************************************
[2025-04-18 20:09:37] 2025-04-19 00:09:18,819 | INFO     | 
[2025-04-18 20:09:37] 2025-04-19 00:09:18,820 | INFO     | architecture information:
[2025-04-18 20:09:37] 2025-04-19 00:09:18,821 | INFO     | executing command: cat /etc/os-release
[2025-04-18 20:09:37] 2025-04-19 00:09:18,835 | INFO     | cat /etc/os-release:
[2025-04-18 20:09:37] NAME="CentOS Linux"
[2025-04-18 20:09:37] VERSION="7 (Core)"
[2025-04-18 20:09:37] ID="centos"
[2025-04-18 20:09:37] ID_LIKE="rhel fedora"
[2025-04-18 20:09:37] VERSION_ID="7"
[2025-04-18 20:09:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 20:09:37] ANSI_COLOR="0;31"
[2025-04-18 20:09:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 20:09:37] HOME_URL="https://www.centos.org/"
[2025-04-18 20:09:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 20:09:37] 
[2025-04-18 20:09:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 20:09:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 20:09:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 20:09:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 20:09:37] 
[2025-04-18 20:09:37] 2025-04-19 00:09:18,835 | INFO     | **************************************
[2025-04-18 20:09:37] 2025-04-19 00:09:19,338 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 20:09:37] 2025-04-19 00:09:19,355 | INFO     | sufficient remaining disk space (29396828160 B)
[2025-04-18 20:09:37] 2025-04-19 00:09:19,355 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 20:09:37] 2025-04-19 00:09:19,355 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 20:09:37] 2025-04-19 00:09:19,355 | INFO     | update_server=False
[2025-04-18 20:09:37] 2025-04-19 00:09:19,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 20:09:37] 2025-04-19 00:09:19,356 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 20:09:37] 2025-04-19 00:09:19,356 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 20:09:37] 2025-04-19 00:09:19,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 20:09:37] 2025-04-19 00:09:19,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 20:09:37] 2025-04-19 00:09:19,538 | INFO     | all job control threads have been joined
[2025-04-18 20:09:37] 2025-04-19 00:09:19,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 20:09:37] 2025-04-19 00:09:19,672 | INFO     | all data control threads have been joined
[2025-04-18 20:09:37] 2025-04-19 00:09:20,125 | INFO     | all payload control threads have been joined
[2025-04-18 20:09:37] 2025-04-19 00:09:20,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 20:09:37] 2025-04-19 00:09:20,296 | INFO     | aborting loop
[2025-04-18 20:09:37] 2025-04-19 00:09:20,361 | INFO     | [job] retrieve thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:20,434 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:20,442 | INFO     | [data] copytool_in thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:20,488 | INFO     | [payload] validate_post thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:20,543 | INFO     | [job] control thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:20,674 | INFO     | [data] control thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:20,904 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:21,131 | INFO     | [payload] control thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:21,291 | INFO     | [job] validate thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:21,302 | INFO     | [job] job monitor thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:21,630 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:21,646 | INFO     | [data] copytool_out thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:21,715 | INFO     | [payload] failed_post thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:22,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 20:09:37] 2025-04-19 00:09:22,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 20:09:37] 2025-04-19 00:09:23,341 | INFO     | [job] queue monitor thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:26,441 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:29,778 | INFO     | job.realtimelogging is not enabled
[2025-04-18 20:09:37] 2025-04-19 00:09:30,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 20:09:37] 2025-04-19 00:09:32,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824440575808)>', '<ExcThread(monitor, started 139823717275392)>']
[2025-04-18 20:09:37] 2025-04-19 00:09:33,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 20:09:37] 2025-04-19 00:09:33,427 | INFO     | [monitor] control thread has ended
[2025-04-18 20:09:37] 2025-04-19 00:09:37,514 | INFO     | all workflow threads have been joined
[2025-04-18 20:09:37] 2025-04-19 00:09:37,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 20:09:37] 2025-04-19 00:09:37,515 | INFO     | traces error code: 0
[2025-04-18 20:09:37] 2025-04-19 00:09:37,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 20:09:37] 2025-04-19 00:09:37,602 [wrapper] ==== pilot stdout END ====
[2025-04-18 20:09:37] 2025-04-19 00:09:37,606 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 20:09:37] 2025-04-19 00:09:37,610 [wrapper] pilotpid: 18203
[2025-04-18 20:09:37] 2025-04-19 00:09:37,614 [wrapper] Pilot exit status: 0
[2025-04-18 20:09:37] 2025-04-19 00:09:37,628 [wrapper] pandaids: 6604773998
[2025-04-18 20:09:37] 2025-04-19 00:09:37,666 [wrapper] cleanup supervisor_pilot 15491 18204
[2025-04-18 20:09:37] 2025-04-19 00:09:37,670 [wrapper] Test setup, not cleaning
[2025-04-18 20:09:37] 2025-04-19 00:09:37,674 [wrapper] apfmon messages muted
[2025-04-18 20:09:37] 2025-04-19 00:09:37,677 [wrapper] ==== wrapper stdout END ====
[2025-04-18 20:09:37] 2025-04-19 00:09:37,681 [wrapper] ==== wrapper stderr END ====
[2025-04-18 20:09:37]  *** Error codes and diagnostics ***
[2025-04-18 20:09:37]     "exeErrorCode": 0,
[2025-04-18 20:09:37]     "exeErrorDiag": "",
[2025-04-18 20:09:37]     "pilotErrorCode": 0,
[2025-04-18 20:09:37]     "pilotErrorDiag": "",
[2025-04-18 20:09:37]  *** Listing of results directory ***
[2025-04-18 20:09:37] total 412880
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 21:02 pilot3.tar.gz
[2025-04-18 20:09:37] -rwx------ 1 boincer umatlas     37140 Apr 16 21:21 runpilot2-wrapper.sh
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 21:21 queuedata.json
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas       100 Apr 18 18:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 20:09:37] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 18:44 run_atlas
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas       105 Apr 18 18:44 job.xml
[2025-04-18 20:09:37] -rw-r--r-- 2 boincer umatlas 226826899 Apr 18 18:44 EVNT.44075481._001892.pool.root.1
[2025-04-18 20:09:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:44 start_atlas.sh
[2025-04-18 20:09:37] drwxrwx--x 2 boincer umatlas      4096 Apr 18 18:44 shared
[2025-04-18 20:09:37] -rw-r--r-- 2 boincer umatlas    508885 Apr 18 18:44 input.tar.gz
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas         0 Apr 18 18:44 boinc_lockfile
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 18:44 pandaJob.out
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas       424 Apr 18 18:44 setup.sh.local
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas    991300 Apr 18 18:44 agis_schedconf.cvmfs.json
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas   1618536 Apr 18 18:44 agis_ddmendpoints.agis.ALL.json
[2025-04-18 20:09:37] drwx------ 4 boincer umatlas      4096 Apr 18 18:44 pilot3
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 20:01 init_data.xml
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas       530 Apr 18 20:08 boinc_task_state.xml
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas 190375642 Apr 18 20:08 HITS.44075483._048414.pool.root.1
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas        95 Apr 18 20:08 pilot_heartbeat.json
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas      1049 Apr 18 20:09 memory_monitor_summary.json
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas    377847 Apr 18 20:09 log.44075483._048414.job.log.tgz.1
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas      7755 Apr 18 20:09 heartbeat.json
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 20:09 boinc_mmap_file
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas        27 Apr 18 20:09 wrapper_checkpoint.txt
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas      4548 Apr 18 20:09 pilotlog.txt
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas    480607 Apr 18 20:09 log.44075483._048414.job.log.1
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas       357 Apr 18 20:09 output.list
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas       620 Apr 18 20:09 runtime_log
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas    880640 Apr 18 20:09 result.tar.gz
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 20:09 runtime_log.err
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas       658 Apr 18 20:09 OkUMDmM7SP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmmebLDmWVPoHo.diag
[2025-04-18 20:09:37] -rw-r--r-- 1 boincer umatlas     21846 Apr 18 20:09 stderr.txt
[2025-04-18 20:09:37] HITS file was successfully produced:
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas 190375642 Apr 18 20:08 shared/HITS.pool.root.1
[2025-04-18 20:09:37]  *** Contents of shared directory: ***
[2025-04-18 20:09:37] total 408812
[2025-04-18 20:09:37] -rw-r--r-- 2 boincer umatlas 226826899 Apr 18 18:44 ATLAS.root_0
[2025-04-18 20:09:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:44 start_atlas.sh
[2025-04-18 20:09:37] -rw-r--r-- 2 boincer umatlas    508885 Apr 18 18:44 input.tar.gz
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas 190375642 Apr 18 20:08 HITS.pool.root.1
[2025-04-18 20:09:37] -rw------- 1 boincer umatlas    880640 Apr 18 20:09 result.tar.gz
20:09:39 (14606): run_atlas exited; CPU time 46412.997341
20:09:39 (14606): called boinc_finish(0)

</stderr_txt>
]]>

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