Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:08:01 (555431): wrapper (7.7.26015): starting
10:08:01 (555431): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 10:08:01] Arguments: --nthreads 4
[2025-04-19 10:08:01] Threads: 4
[2025-04-19 10:08:01] Checking for CVMFS
[2025-04-19 10:08:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 10:08:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 10:08:01] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 10:08:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 10:08:01] 2.9.2.0 3037 1672 90892 145030 2 56 27610641 36864001 0 130560 0 1407690 99.992 325544 10101 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 10:08:01] CVMFS is ok
[2025-04-19 10:08:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 10:08:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 10:08:01] Further information can be found at the LHC@home message board.
[2025-04-19 10:08:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 10:08:01] Checking for apptainer binary...
[2025-04-19 10:08:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 10:08:01] Running /usr/bin/apptainer --version
[2025-04-19 10:08:01] apptainer version 1.3.6-6.1
[2025-04-19 10:08:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 10:08:01] thA338
[2025-04-19 10:08:01] apptainer works
[2025-04-19 10:08:01] Set ATHENA_PROC_NUMBER=4
[2025-04-19 10:08:01] Set ATHENA_CORE_NUMBER=4
[2025-04-19 10:08:01] Starting ATLAS job with PandaID=6602112186
[2025-04-19 10:08:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:25:01]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:25:01]  is_altstaged=None
[2025-04-19 11:25:01]  is_tar=False
[2025-04-19 11:25:01]  lfn=log.44075483._011660.job.log.tgz.1
[2025-04-19 11:25:01]  mtime=0
[2025-04-19 11:25:01]  protocol_id=None
[2025-04-19 11:25:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 11:25:01]  replicas=None
[2025-04-19 11:25:01]  scope=mc23_13p6TeV
[2025-04-19 11:25:01]  status=None
[2025-04-19 11:25:01]  status_code=0
[2025-04-19 11:25:01]  storage_token=
[2025-04-19 11:25:01]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6602112186/log.44075483._011660.job.log.tgz.1
[2025-04-19 11:25:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/7c/log.44075483._011660.job.log.tgz.1
[2025-04-19 11:25:01]  workdir=None
[2025-04-19 11:25:01] ]
[2025-04-19 11:25:01] 2025-04-19 09:24:38,873 | INFO     | transferring file log.44075483._011660.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6602112186/log.44075483._011660.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 11:25:01] 2025-04-19 09:24:38,874 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6602112186/log.44075483._011660.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0116
[2025-04-19 11:25:01] 2025-04-19 09:24:38,894 | INFO     | adding to output.list: log.44075483._011660.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/7c/log.44075483._011660.job.log.tg
[2025-04-19 11:25:01] 2025-04-19 09:24:38,895 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 11:25:01] 2025-04-19 09:24:38,895 | INFO     | summary of transferred files:
[2025-04-19 11:25:01] 2025-04-19 09:24:38,895 | INFO     |  -- lfn=log.44075483._011660.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 11:25:01] 2025-04-19 09:24:38,895 | INFO     | stage-out finished correctly
[2025-04-19 11:25:01] 2025-04-19 09:24:39,445 | INFO     | monitor loop #353: job 0:6602112186 is in state 'finished'
[2025-04-19 11:25:01] 2025-04-19 09:24:39,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:25:01] 2025-04-19 09:24:39,973 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 11:25:01] 2025-04-19 09:24:41,844 | INFO     | job 6602112186 has state=finished
[2025-04-19 11:25:01] 2025-04-19 09:24:41,844 | INFO     | preparing for final server update for job 6602112186 in state='finished'
[2025-04-19 11:25:01] 2025-04-19 09:24:41,844 | INFO     | this job has now completed (state=finished)
[2025-04-19 11:25:01] 2025-04-19 09:24:41,844 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 11:25:01] 2025-04-19 09:24:41,845 | INFO     | log transfer has been attempted: DONE
[2025-04-19 11:25:01] 2025-04-19 09:24:41,845 | INFO     | job 6602112186 has finished - writing final server update
[2025-04-19 11:25:01] 2025-04-19 09:24:41,845 | INFO     | total number of processed events: 400 (read)
[2025-04-19 11:25:01] 2025-04-19 09:24:41,847 | INFO     | executing command: lscpu
[2025-04-19 11:25:01] 2025-04-19 09:24:41,869 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 11:25:01] 2025-04-19 09:24:41,949 | INFO     | monitor loop #354: job 0:6602112186 is in state 'finished'
[2025-04-19 11:25:01] 2025-04-19 09:24:41,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:25:01] 2025-04-19 09:24:44,452 | INFO     | monitor loop #355: job 0:6602112186 is in state 'finished'
[2025-04-19 11:25:01] 2025-04-19 09:24:44,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:25:01] 2025-04-19 09:24:46,955 | INFO     | monitor loop #356: job 0:6602112186 is in state 'finished'
[2025-04-19 11:25:01] 2025-04-19 09:24:46,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:25:01] 2025-04-19 09:24:47,042 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 11:25:01] 2025-04-19 09:24:47,042 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6602112186/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 11:25:01] 2025-04-19 09:24:47,042 | INFO     | extracted standard info from prmon json
[2025-04-19 11:25:01] 2025-04-19 09:24:47,043 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 11:25:01] 2025-04-19 09:24:47,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 11:25:01] 2025-04-19 09:24:47,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 11:25:01] 2025-04-19 09:24:47,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | fitting pss+swap vs Time
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | sum of square deviations: 97479037.0
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | sum of deviations: 9811384234.5
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | mean x: 1745052460.5
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | mean y: 2410106.720588235
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | -- intersect: -175639253231.88147
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | intersect: -175639253231.88147
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | chi2: 0.8594917653747531
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | -- intersect: -175639253231.88147
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | current memory leak: 100.65 B/s (using 68 data points, chi2=0.86)
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | ..............................
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | . Timing measurements:
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | . get job = 0 s
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | . initial setup = 1 s
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | . payload setup = 4 s
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | . stage-in = 0 s
[2025-04-19 11:25:01] 2025-04-19 09:24:47,044 | INFO     | . payload execution = 4567 s
[2025-04-19 11:25:01] 2025-04-19 09:24:47,045 | INFO     | . stage-out = 0 s
[2025-04-19 11:25:01] 2025-04-19 09:24:47,045 | INFO     | . log creation = 0 s
[2025-04-19 11:25:01] 2025-04-19 09:24:47,045 | INFO     | ..............................
[2025-04-19 11:25:01] 2025-04-19 09:24:47,086 | INFO     | 
[2025-04-19 11:25:01] 2025-04-19 09:24:47,086 | INFO     | job summary report
[2025-04-19 11:25:01] 2025-04-19 09:24:47,086 | INFO     | --------------------------------------------------
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | PanDA job id: 6602112186
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | task id: 44075483
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | errors: (none)
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | pilot state: finished 
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | transexitcode: 0
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | exeerrorcode: 0
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | exeerrordiag: 
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | exitcode: 0
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | exitmsg: OK
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | cpuconsumptiontime: 15700 s
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | nevents: 400
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | neventsw: 0
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | pid: 565727
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | pgrp: 565727
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | corecount: 4
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | event service: False
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | sizes: {0: 2426774, 3: 2426980, 10: 2427008, 4575: 2462130, 4576: 2462130, 4583: 2462300}
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | --------------------------------------------------
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | 
[2025-04-19 11:25:01] 2025-04-19 09:24:47,087 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 11:25:01] 2025-04-19 09:24:47,106 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | job 6602112186 has completed (purged errors)
[2025-04-19 11:25:01] 2025-04-19 09:24:47,107 | INFO     | overall cleanup function is called
[2025-04-19 11:25:01] 2025-04-19 09:24:48,114 | INFO     | --- collectZombieJob: --- 10, [565727]
[2025-04-19 11:25:01] 2025-04-19 09:24:48,114 | INFO     | zombie collector waiting for pid 565727
[2025-04-19 11:25:01] 2025-04-19 09:24:48,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:25:01] 2025-04-19 09:24:48,115 | INFO     | collected zombie processes
[2025-04-19 11:25:01] 2025-04-19 09:24:48,115 | INFO     | will attempt to kill all subprocesses of pid=565727
[2025-04-19 11:25:01] 2025-04-19 09:24:48,160 | INFO     | process IDs to be killed: [565727] (in reverse order)
[2025-04-19 11:25:01] 2025-04-19 09:24:48,195 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:25:01] 2025-04-19 09:24:48,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:25:01] 2025-04-19 09:24:48,197 | INFO     | did not find any defunct processes belonging to 565727
[2025-04-19 11:25:01] 2025-04-19 09:24:48,198 | INFO     | did not find any defunct processes belonging to 565727
[2025-04-19 11:25:01] 2025-04-19 09:24:48,198 | INFO     | ready for new job
[2025-04-19 11:25:01] 2025-04-19 09:24:48,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:25:01] 2025-04-19 09:24:48,199 | INFO     | **************************************
[2025-04-19 11:25:01] 2025-04-19 09:24:48,199 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:25:01] 2025-04-19 09:24:48,199 | INFO     | **************************************
[2025-04-19 11:25:01] 2025-04-19 09:24:48,199 | INFO     | 
[2025-04-19 11:25:01] 2025-04-19 09:24:48,200 | INFO     | architecture information:
[2025-04-19 11:25:01] 2025-04-19 09:24:48,200 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:25:01] 2025-04-19 09:24:48,214 | INFO     | cat /etc/os-release:
[2025-04-19 11:25:01] NAME="CentOS Linux"
[2025-04-19 11:25:01] VERSION="7 (Core)"
[2025-04-19 11:25:01] ID="centos"
[2025-04-19 11:25:01] ID_LIKE="rhel fedora"
[2025-04-19 11:25:01] VERSION_ID="7"
[2025-04-19 11:25:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:25:01] ANSI_COLOR="0;31"
[2025-04-19 11:25:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:25:01] HOME_URL="https://www.centos.org/"
[2025-04-19 11:25:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:25:01] 
[2025-04-19 11:25:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:25:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:25:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:25:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:25:01] 
[2025-04-19 11:25:01] 2025-04-19 09:24:48,214 | INFO     | **************************************
[2025-04-19 11:25:01] 2025-04-19 09:24:48,717 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 11:25:01] 2025-04-19 09:24:48,735 | INFO     | sufficient remaining disk space (227387899904 B)
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | INFO     | update_server=False
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:25:01] 2025-04-19 09:24:48,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:25:01] 2025-04-19 09:24:48,737 | INFO     | aborting loop
[2025-04-19 11:25:01] 2025-04-19 09:24:49,186 | INFO     | all job control threads have been joined
[2025-04-19 11:25:01] 2025-04-19 09:24:49,296 | INFO     | all payload control threads have been joined
[2025-04-19 11:25:01] 2025-04-19 09:24:49,402 | INFO     | all data control threads have been joined
[2025-04-19 11:25:01] 2025-04-19 09:24:49,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:25:01] 2025-04-19 09:24:49,741 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:49,742 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:49,742 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:49,983 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:50,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:50,191 | INFO     | [job] control thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:50,211 | INFO     | [job] validate thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:50,254 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:50,302 | INFO     | [payload] control thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:50,365 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:50,408 | INFO     | [data] control thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:50,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:25:01] 2025-04-19 09:24:50,732 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:51,079 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:51,249 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:51,458 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:54,534 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:25:01] 2025-04-19 09:24:56,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122393737024)>', '<ExcThread(monitor, started 140121588344576)>']
[2025-04-19 11:25:01] 2025-04-19 09:24:56,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:25:01] 2025-04-19 09:24:56,779 | INFO     | [monitor] control thread has ended
[2025-04-19 11:25:01] 2025-04-19 09:25:01,204 | INFO     | all workflow threads have been joined
[2025-04-19 11:25:01] 2025-04-19 09:25:01,204 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:25:01] 2025-04-19 09:25:01,205 | INFO     | traces error code: 0
[2025-04-19 11:25:01] 2025-04-19 09:25:01,205 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:25:01] 2025-04-19 09:25:01,286 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:25:01] 2025-04-19 09:25:01,290 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:25:01] 2025-04-19 09:25:01,294 [wrapper] pilotpid: 559149
[2025-04-19 11:25:01] 2025-04-19 09:25:01,299 [wrapper] Pilot exit status: 0
[2025-04-19 11:25:01] 2025-04-19 09:25:01,311 [wrapper] pandaids: 6602112186
[2025-04-19 11:25:01] 2025-04-19 09:25:01,334 [wrapper] cleanup supervisor_pilot  578130 559150
[2025-04-19 11:25:01] 2025-04-19 09:25:01,338 [wrapper] Test setup, not cleaning
[2025-04-19 11:25:01] 2025-04-19 09:25:01,342 [wrapper] apfmon messages muted
[2025-04-19 11:25:01] 2025-04-19 09:25:01,345 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:25:01] 2025-04-19 09:25:01,350 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:25:01]  *** Error codes and diagnostics ***
[2025-04-19 11:25:01]     "exeErrorCode": 0,
[2025-04-19 11:25:01]     "exeErrorDiag": "",
[2025-04-19 11:25:01]     "pilotErrorCode": 0,
[2025-04-19 11:25:01]     "pilotErrorDiag": "",
[2025-04-19 11:25:01]  *** Listing of results directory ***
[2025-04-19 11:25:01] total 406604
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc    495897 Apr 14 03:38 pilot3.tar.gz
[2025-04-19 11:25:01] -rwx------ 1 boinc boinc     37140 Apr 14 04:10 runpilot2-wrapper.sh
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc      5111 Apr 14 04:10 queuedata.json
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc       100 Apr 19 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:25:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 10:08 run_atlas
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc       105 Apr 19 10:08 job.xml
[2025-04-19 11:25:01] -rw-r--r-- 2 boinc boinc 223460110 Apr 19 10:08 EVNT.44075481._000458.pool.root.1
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc      6859 Apr 19 10:08 init_data.xml
[2025-04-19 11:25:01] drwxrwx--x 2 boinc boinc      4096 Apr 19 10:08 shared
[2025-04-19 11:25:01] -rw-r--r-- 2 boinc boinc    508887 Apr 19 10:08 input.tar.gz
[2025-04-19 11:25:01] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:08 start_atlas.sh
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc         0 Apr 19 10:08 boinc_lockfile
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc      2577 Apr 19 10:08 pandaJob.out
[2025-04-19 11:25:01] -rw------- 1 boinc boinc       424 Apr 19 10:08 setup.sh.local
[2025-04-19 11:25:01] -rw------- 1 boinc boinc    991300 Apr 19 10:08 agis_schedconf.cvmfs.json
[2025-04-19 11:25:01] -rw------- 1 boinc boinc   1618536 Apr 19 10:08 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:25:01] drwx------ 4 boinc boinc      4096 Apr 19 10:08 pilot3
[2025-04-19 11:25:01] -rw------- 1 boinc boinc 187620487 Apr 19 11:24 HITS.44075483._011660.pool.root.1
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc       529 Apr 19 11:24 boinc_task_state.xml
[2025-04-19 11:25:01] -rw------- 1 boinc boinc        95 Apr 19 11:24 pilot_heartbeat.json
[2025-04-19 11:25:01] -rw------- 1 boinc boinc      1022 Apr 19 11:24 memory_monitor_summary.json
[2025-04-19 11:25:01] -rw------- 1 boinc boinc    253434 Apr 19 11:24 log.44075483._011660.job.log.tgz.1
[2025-04-19 11:25:01] -rw------- 1 boinc boinc      7657 Apr 19 11:24 heartbeat.json
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc      8192 Apr 19 11:24 boinc_mmap_file
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc        27 Apr 19 11:24 wrapper_checkpoint.txt
[2025-04-19 11:25:01] -rw------- 1 boinc boinc      4480 Apr 19 11:25 pilotlog.txt
[2025-04-19 11:25:01] -rw------- 1 boinc boinc    450576 Apr 19 11:25 log.44075483._011660.job.log.1
[2025-04-19 11:25:01] -rw------- 1 boinc boinc       357 Apr 19 11:25 output.list
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc       620 Apr 19 11:25 runtime_log
[2025-04-19 11:25:01] -rw------- 1 boinc boinc    727040 Apr 19 11:25 result.tar.gz
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc     11099 Apr 19 11:25 runtime_log.err
[2025-04-19 11:25:01] -rw------- 1 boinc boinc       658 Apr 19 11:25 H84NDmBSOO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmiHVLDmRoQ5Pm.diag
[2025-04-19 11:25:01] -rw-r--r-- 1 boinc boinc     21401 Apr 19 11:25 stderr.txt
[2025-04-19 11:25:01] HITS file was successfully produced:
[2025-04-19 11:25:01] -rw------- 1 boinc boinc 187620487 Apr 19 11:24 shared/HITS.pool.root.1
[2025-04-19 11:25:01]  *** Contents of shared directory: ***
[2025-04-19 11:25:01] total 402688
[2025-04-19 11:25:01] -rw-r--r-- 2 boinc boinc 223460110 Apr 19 10:08 ATLAS.root_0
[2025-04-19 11:25:01] -rw-r--r-- 2 boinc boinc    508887 Apr 19 10:08 input.tar.gz
[2025-04-19 11:25:01] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:08 start_atlas.sh
[2025-04-19 11:25:01] -rw------- 1 boinc boinc 187620487 Apr 19 11:24 HITS.pool.root.1
[2025-04-19 11:25:01] -rw------- 1 boinc boinc    727040 Apr 19 11:25 result.tar.gz
11:25:02 (555431): run_atlas exited; CPU time 15715.524821
11:25:02 (555431): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN