Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:06:19 (881991): wrapper (7.7.26015): starting
10:06:19 (881991): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 10:06:19] Arguments: --nthreads 4
[2025-04-19 10:06:19] Threads: 4
[2025-04-19 10:06:19] Checking for CVMFS
[2025-04-19 10:06:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 10:06:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 10:06:19] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 10:06:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 10:06:19] 2.9.2.0 1946448 10513 102776 145030 3 56 26407515 36864000 0 130560 0 7985100 99.937 2723293 5005 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 10:06:19] CVMFS is ok
[2025-04-19 10:06:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 10:06:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 10:06:19] Further information can be found at the LHC@home message board.
[2025-04-19 10:06:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 10:06:19] Checking for apptainer binary...
[2025-04-19 10:06:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 10:06:19] Running /usr/bin/apptainer --version
[2025-04-19 10:06:19] apptainer version 1.3.6-4.2
[2025-04-19 10:06:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 10:06:19] thA325
[2025-04-19 10:06:19] apptainer works
[2025-04-19 10:06:19] Set ATHENA_PROC_NUMBER=4
[2025-04-19 10:06:19] Set ATHENA_CORE_NUMBER=4
[2025-04-19 10:06:19] Starting ATLAS job with PandaID=6606785605
[2025-04-19 10:06:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:21:40]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:21:40]  is_tar=False
[2025-04-19 11:21:40]  lfn=log.44075483._073587.job.log.tgz.1
[2025-04-19 11:21:40]  mtime=0
[2025-04-19 11:21:40]  protocol_id=None
[2025-04-19 11:21:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 11:21:40]  replicas=None
[2025-04-19 11:21:40]  scope=mc23_13p6TeV
[2025-04-19 11:21:40]  status=None
[2025-04-19 11:21:40]  status_code=0
[2025-04-19 11:21:40]  storage_token=
[2025-04-19 11:21:40]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606785605/log.44075483._073587.job.log.tgz.1
[2025-04-19 11:21:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/14/log.44075483._073587.job.log.tgz.1
[2025-04-19 11:21:40]  workdir=None
[2025-04-19 11:21:40] ]
[2025-04-19 11:21:40] 2025-04-19 09:21:13,752 | INFO     | transferring file log.44075483._073587.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606785605/log.44075483._073587.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 11:21:40] 2025-04-19 09:21:13,752 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606785605/log.44075483._073587.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0735
[2025-04-19 11:21:40] 2025-04-19 09:21:13,769 | INFO     | adding to output.list: log.44075483._073587.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/14/log.44075483._073587.job.log.tg
[2025-04-19 11:21:40] 2025-04-19 09:21:13,770 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 11:21:40] 2025-04-19 09:21:13,770 | INFO     | summary of transferred files:
[2025-04-19 11:21:40] 2025-04-19 09:21:13,770 | INFO     |  -- lfn=log.44075483._073587.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 11:21:40] 2025-04-19 09:21:13,770 | INFO     | stage-out finished correctly
[2025-04-19 11:21:40] 2025-04-19 09:21:14,377 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 11:21:40] 2025-04-19 09:21:14,624 | INFO     | monitor loop #346: job 0:6606785605 is in state 'finished'
[2025-04-19 11:21:40] 2025-04-19 09:21:14,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:21:40] 2025-04-19 09:21:15,617 | INFO     | job 6606785605 has state=finished
[2025-04-19 11:21:40] 2025-04-19 09:21:15,617 | INFO     | preparing for final server update for job 6606785605 in state='finished'
[2025-04-19 11:21:40] 2025-04-19 09:21:15,618 | INFO     | this job has now completed (state=finished)
[2025-04-19 11:21:40] 2025-04-19 09:21:15,618 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 11:21:40] 2025-04-19 09:21:15,618 | INFO     | log transfer has been attempted: DONE
[2025-04-19 11:21:40] 2025-04-19 09:21:15,618 | INFO     | job 6606785605 has finished - writing final server update
[2025-04-19 11:21:40] 2025-04-19 09:21:15,618 | INFO     | total number of processed events: 400 (read)
[2025-04-19 11:21:40] 2025-04-19 09:21:15,621 | INFO     | executing command: lscpu
[2025-04-19 11:21:40] 2025-04-19 09:21:15,643 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 11:21:40] 2025-04-19 09:21:17,127 | INFO     | monitor loop #347: job 0:6606785605 is in state 'finished'
[2025-04-19 11:21:40] 2025-04-19 09:21:17,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:21:40] 2025-04-19 09:21:17,291 | INFO     | PID=885729 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 11:21:40] 2025-04-19 09:21:19,630 | INFO     | monitor loop #348: job 0:6606785605 is in state 'finished'
[2025-04-19 11:21:40] 2025-04-19 09:21:19,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:21:40] 2025-04-19 09:21:20,325 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 11:21:40] 2025-04-19 09:21:20,326 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606785605/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 11:21:40] 2025-04-19 09:21:20,326 | INFO     | extracted standard info from prmon json
[2025-04-19 11:21:40] 2025-04-19 09:21:20,326 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 11:21:40] 2025-04-19 09:21:20,326 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 11:21:40] 2025-04-19 09:21:20,326 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 11:21:40] 2025-04-19 09:21:20,326 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 11:21:40] 2025-04-19 09:21:20,327 | INFO     | fitting pss+swap vs Time
[2025-04-19 11:21:40] 2025-04-19 09:21:20,327 | INFO     | sum of square deviations: 93240818.0
[2025-04-19 11:21:40] 2025-04-19 09:21:20,327 | INFO     | sum of deviations: 8060466068.000001
[2025-04-19 11:21:40] 2025-04-19 09:21:20,327 | INFO     | mean x: 1745052327.0
[2025-04-19 11:21:40] 2025-04-19 09:21:20,327 | INFO     | mean y: 2351424.268656716
[2025-04-19 11:21:40] 2025-04-19 09:21:20,327 | INFO     | -- intersect: -150853629576.1119
[2025-04-19 11:21:40] 2025-04-19 09:21:20,327 | INFO     | intersect: -150853629576.1119
[2025-04-19 11:21:40] 2025-04-19 09:21:20,327 | INFO     | chi2: 0.8493688384786837
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | -- intersect: -150853629576.1119
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | current memory leak: 86.45 B/s (using 67 data points, chi2=0.85)
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | ..............................
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | . Timing measurements:
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | . get job = 0 s
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | . initial setup = 1 s
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | . payload setup = 4 s
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | . stage-in = 0 s
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | . payload execution = 4464 s
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | . stage-out = 0 s
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | . log creation = 0 s
[2025-04-19 11:21:40] 2025-04-19 09:21:20,328 | INFO     | ..............................
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | 
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | job summary report
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | --------------------------------------------------
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | PanDA job id: 6606785605
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | task id: 44075483
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | errors: (none)
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | pilot state: finished 
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | transexitcode: 0
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | exeerrorcode: 0
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | exeerrordiag: 
[2025-04-19 11:21:40] 2025-04-19 09:21:20,513 | INFO     | exitcode: 0
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | exitmsg: OK
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | cpuconsumptiontime: 15306 s
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | nevents: 400
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | neventsw: 0
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | pid: 892309
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | pgrp: 892309
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | corecount: 4
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | event service: False
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | sizes: {0: 2426776, 3: 2426982, 11: 2427010, 4471: 2453159, 4472: 2453158, 4473: 2462345, 4479: 2462459}
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | --------------------------------------------------
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | 
[2025-04-19 11:21:40] 2025-04-19 09:21:20,514 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:21:40] 2025-04-19 09:21:20,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:21:40] 2025-04-19 09:21:20,535 | INFO     | job 6606785605 has completed (purged errors)
[2025-04-19 11:21:40] 2025-04-19 09:21:20,535 | INFO     | overall cleanup function is called
[2025-04-19 11:21:40] 2025-04-19 09:21:21,542 | INFO     | --- collectZombieJob: --- 10, [892309]
[2025-04-19 11:21:40] 2025-04-19 09:21:21,542 | INFO     | zombie collector waiting for pid 892309
[2025-04-19 11:21:40] 2025-04-19 09:21:21,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:21:40] 2025-04-19 09:21:21,542 | INFO     | collected zombie processes
[2025-04-19 11:21:40] 2025-04-19 09:21:21,542 | INFO     | will attempt to kill all subprocesses of pid=892309
[2025-04-19 11:21:40] 2025-04-19 09:21:21,588 | INFO     | process IDs to be killed: [892309] (in reverse order)
[2025-04-19 11:21:40] 2025-04-19 09:21:21,621 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:21:40] 2025-04-19 09:21:21,621 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:21:40] 2025-04-19 09:21:21,623 | INFO     | did not find any defunct processes belonging to 892309
[2025-04-19 11:21:40] 2025-04-19 09:21:21,624 | INFO     | did not find any defunct processes belonging to 892309
[2025-04-19 11:21:40] 2025-04-19 09:21:21,624 | INFO     | ready for new job
[2025-04-19 11:21:40] 2025-04-19 09:21:21,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:21:40] 2025-04-19 09:21:21,625 | INFO     | **************************************
[2025-04-19 11:21:40] 2025-04-19 09:21:21,625 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:21:40] 2025-04-19 09:21:21,625 | INFO     | **************************************
[2025-04-19 11:21:40] 2025-04-19 09:21:21,625 | INFO     | 
[2025-04-19 11:21:40] 2025-04-19 09:21:21,625 | INFO     | architecture information:
[2025-04-19 11:21:40] 2025-04-19 09:21:21,626 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:21:40] 2025-04-19 09:21:21,639 | INFO     | cat /etc/os-release:
[2025-04-19 11:21:40] NAME="CentOS Linux"
[2025-04-19 11:21:40] VERSION="7 (Core)"
[2025-04-19 11:21:40] ID="centos"
[2025-04-19 11:21:40] ID_LIKE="rhel fedora"
[2025-04-19 11:21:40] VERSION_ID="7"
[2025-04-19 11:21:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:21:40] ANSI_COLOR="0;31"
[2025-04-19 11:21:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:21:40] HOME_URL="https://www.centos.org/"
[2025-04-19 11:21:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:21:40] 
[2025-04-19 11:21:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:21:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:21:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:21:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:21:40] 
[2025-04-19 11:21:40] 2025-04-19 09:21:21,639 | INFO     | **************************************
[2025-04-19 11:21:40] 2025-04-19 09:21:22,142 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 11:21:40] 2025-04-19 09:21:22,159 | INFO     | sufficient remaining disk space (228566499328 B)
[2025-04-19 11:21:40] 2025-04-19 09:21:22,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:21:40] 2025-04-19 09:21:22,160 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:21:40] 2025-04-19 09:21:22,160 | INFO     | update_server=False
[2025-04-19 11:21:40] 2025-04-19 09:21:22,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:21:40] 2025-04-19 09:21:22,160 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 11:21:40] 2025-04-19 09:21:22,160 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:21:40] 2025-04-19 09:21:22,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:21:40] 2025-04-19 09:21:22,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:21:40] 2025-04-19 09:21:22,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:21:40] 2025-04-19 09:21:22,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:21:40] 2025-04-19 09:21:22,658 | INFO     | all data control threads have been joined
[2025-04-19 11:21:40] 2025-04-19 09:21:23,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:21:40] 2025-04-19 09:21:23,140 | INFO     | aborting loop
[2025-04-19 11:21:40] 2025-04-19 09:21:23,165 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:23,165 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:23,191 | INFO     | all job control threads have been joined
[2025-04-19 11:21:40] 2025-04-19 09:21:23,381 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:23,475 | INFO     | all payload control threads have been joined
[2025-04-19 11:21:40] 2025-04-19 09:21:23,560 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:23,664 | INFO     | [data] control thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:23,947 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:24,145 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:24,165 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:24,197 | INFO     | [job] control thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:24,211 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:24,481 | INFO     | [payload] control thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:24,566 | INFO     | [job] validate thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:24,598 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:24,659 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:24,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:21:40] 2025-04-19 09:21:25,611 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-04-19 11:21:40] 2025-04-19 09:21:28,939 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:32,271 | INFO     | job.realtimelogging is not enabled
[2025-04-19 11:21:40] 2025-04-19 09:21:33,277 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:21:40] 2025-04-19 09:21:34,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836661651264)>', '<ExcThread(monitor, started 139835704583936)>']
[2025-04-19 11:21:40] 2025-04-19 09:21:35,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:21:40] 2025-04-19 09:21:35,229 | INFO     | [monitor] control thread has ended
[2025-04-19 11:21:40] 2025-04-19 09:21:39,844 | INFO     | all workflow threads have been joined
[2025-04-19 11:21:40] 2025-04-19 09:21:39,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:21:40] 2025-04-19 09:21:39,845 | INFO     | traces error code: 0
[2025-04-19 11:21:40] 2025-04-19 09:21:39,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:21:40] 2025-04-19 09:21:39,915 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:21:40] 2025-04-19 09:21:39,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:21:40] 2025-04-19 09:21:39,923 [wrapper] pilotpid: 885729
[2025-04-19 11:21:40] 2025-04-19 09:21:39,927 [wrapper] Pilot exit status: 0
[2025-04-19 11:21:40] 2025-04-19 09:21:39,938 [wrapper] pandaids: 6606785605
[2025-04-19 11:21:40] 2025-04-19 09:21:39,960 [wrapper] cleanup supervisor_pilot  907169 885730
[2025-04-19 11:21:40] 2025-04-19 09:21:39,963 [wrapper] Test setup, not cleaning
[2025-04-19 11:21:40] 2025-04-19 09:21:39,967 [wrapper] apfmon messages muted
[2025-04-19 11:21:40] 2025-04-19 09:21:39,971 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:21:40] 2025-04-19 09:21:39,975 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:21:40]  *** Error codes and diagnostics ***
[2025-04-19 11:21:40]     "exeErrorCode": 0,
[2025-04-19 11:21:40]     "exeErrorDiag": "",
[2025-04-19 11:21:40]     "pilotErrorCode": 0,
[2025-04-19 11:21:40]     "pilotErrorDiag": "",
[2025-04-19 11:21:40]  *** Listing of results directory ***
[2025-04-19 11:21:40] total 411296
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc    495897 Apr 18 21:39 pilot3.tar.gz
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc      5111 Apr 18 21:51 queuedata.json
[2025-04-19 11:21:40] -rwx------ 1 boinc boinc     37140 Apr 18 21:52 runpilot2-wrapper.sh
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc       100 Apr 19 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:21:40] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 10:06 run_atlas
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc       105 Apr 19 10:06 job.xml
[2025-04-19 11:21:40] -rw-r--r-- 2 boinc boinc 224573569 Apr 19 10:06 EVNT.44075481._002858.pool.root.1
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc      6853 Apr 19 10:06 init_data.xml
[2025-04-19 11:21:40] drwxrwx--x 2 boinc boinc      4096 Apr 19 10:06 shared
[2025-04-19 11:21:40] -rw-r--r-- 2 boinc boinc    508891 Apr 19 10:06 input.tar.gz
[2025-04-19 11:21:40] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:06 start_atlas.sh
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc         0 Apr 19 10:06 boinc_lockfile
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc      2578 Apr 19 10:06 pandaJob.out
[2025-04-19 11:21:40] -rw------- 1 boinc boinc       424 Apr 19 10:06 setup.sh.local
[2025-04-19 11:21:40] -rw------- 1 boinc boinc    991300 Apr 19 10:06 agis_schedconf.cvmfs.json
[2025-04-19 11:21:40] -rw------- 1 boinc boinc   1618536 Apr 19 10:06 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:21:40] drwx------ 4 boinc boinc      4096 Apr 19 10:06 pilot3
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc       530 Apr 19 11:20 boinc_task_state.xml
[2025-04-19 11:21:40] -rw------- 1 boinc boinc        95 Apr 19 11:20 pilot_heartbeat.json
[2025-04-19 11:21:40] -rw------- 1 boinc boinc 191330144 Apr 19 11:20 HITS.44075483._073587.pool.root.1
[2025-04-19 11:21:40] -rw------- 1 boinc boinc      1022 Apr 19 11:21 memory_monitor_summary.json
[2025-04-19 11:21:40] -rw------- 1 boinc boinc    255055 Apr 19 11:21 log.44075483._073587.job.log.tgz.1
[2025-04-19 11:21:40] -rw------- 1 boinc boinc      7666 Apr 19 11:21 heartbeat.json
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc      8192 Apr 19 11:21 boinc_mmap_file
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc        27 Apr 19 11:21 wrapper_checkpoint.txt
[2025-04-19 11:21:40] -rw------- 1 boinc boinc      4552 Apr 19 11:21 pilotlog.txt
[2025-04-19 11:21:40] -rw------- 1 boinc boinc    441337 Apr 19 11:21 log.44075483._073587.job.log.1
[2025-04-19 11:21:40] -rw------- 1 boinc boinc       357 Apr 19 11:21 output.list
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc       620 Apr 19 11:21 runtime_log
[2025-04-19 11:21:40] -rw------- 1 boinc boinc    716800 Apr 19 11:21 result.tar.gz
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc     11099 Apr 19 11:21 runtime_log.err
[2025-04-19 11:21:40] -rw------- 1 boinc boinc       658 Apr 19 11:21 3vVLDm0v6P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmT3fLDmhFksLo.diag
[2025-04-19 11:21:40] -rw-r--r-- 1 boinc boinc     21541 Apr 19 11:21 stderr.txt
[2025-04-19 11:21:40] HITS file was successfully produced:
[2025-04-19 11:21:40] -rw------- 1 boinc boinc 191330144 Apr 19 11:20 shared/HITS.pool.root.1
[2025-04-19 11:21:40]  *** Contents of shared directory: ***
[2025-04-19 11:21:40] total 407388
[2025-04-19 11:21:40] -rw-r--r-- 2 boinc boinc 224573569 Apr 19 10:06 ATLAS.root_0
[2025-04-19 11:21:40] -rw-r--r-- 2 boinc boinc    508891 Apr 19 10:06 input.tar.gz
[2025-04-19 11:21:40] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:06 start_atlas.sh
[2025-04-19 11:21:40] -rw------- 1 boinc boinc 191330144 Apr 19 11:20 HITS.pool.root.1
[2025-04-19 11:21:40] -rw------- 1 boinc boinc    716800 Apr 19 11:21 result.tar.gz
11:21:41 (881991): run_atlas exited; CPU time 15322.154393
11:21:41 (881991): called boinc_finish(0)

</stderr_txt>
]]>

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