Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:32:00 (30012): wrapper (7.7.26015): starting
18:32:00 (30012): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 18:32:00] Arguments: --nthreads 12
[2025-04-18 18:32:00] Threads: 12
[2025-04-18 18:32:00] Checking for CVMFS
[2025-04-18 18:32:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 18:32:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 18:32:01] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 18:32:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 18:32:01] 2.11.2.0 14409 377363 168080 145018 0 58 18318892 20275200 1 130560 0 23431383 99.990 7062250 54698 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 18:32:01] CVMFS is ok
[2025-04-18 18:32:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 18:32:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 18:32:01] Further information can be found at the LHC@home message board.
[2025-04-18 18:32:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 18:32:01] Checking for apptainer binary...
[2025-04-18 18:32:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 18:32:01] Running /usr/bin/apptainer --version
[2025-04-18 18:32:01] apptainer version 1.3.2-1.el7
[2025-04-18 18:32:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 18:32:02] c-205-32.aglt2.org
[2025-04-18 18:32:02] apptainer works
[2025-04-18 18:32:02] Set ATHENA_PROC_NUMBER=12
[2025-04-18 18:32:02] Set ATHENA_CORE_NUMBER=12
[2025-04-18 18:32:02] Starting ATLAS job with PandaID=6606785511
[2025-04-18 18:32:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 19:56:03]  *** The last 200 lines of the pilot log: ***
[2025-04-18 19:56:03]  filetype=log
[2025-04-18 19:56:03]  guid=da686f60-bceb-4be3-9b16-bb5ae0cf2655
[2025-04-18 19:56:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 19:56:03]  is_altstaged=None
[2025-04-18 19:56:03]  is_tar=False
[2025-04-18 19:56:03]  lfn=log.44075483._073493.job.log.tgz.1
[2025-04-18 19:56:03]  mtime=0
[2025-04-18 19:56:03]  protocol_id=None
[2025-04-18 19:56:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 19:56:03]  replicas=None
[2025-04-18 19:56:03]  scope=mc23_13p6TeV
[2025-04-18 19:56:03]  status=None
[2025-04-18 19:56:03]  status_code=0
[2025-04-18 19:56:03]  storage_token=
[2025-04-18 19:56:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606785511/log.44075483._073493.job.log.tgz.1
[2025-04-18 19:56:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/04/log.44075483._073493.job.log.tgz.1
[2025-04-18 19:56:03]  workdir=None
[2025-04-18 19:56:03] ]
[2025-04-18 19:56:03] 2025-04-18 23:55:47,047 | INFO     | transferring file log.44075483._073493.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606785511/log.44075483._073493.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 19:56:03] 2025-04-18 23:55:47,048 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606785511/log.44075483._073493.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._073493.job
[2025-04-18 19:56:03] 2025-04-18 23:55:47,071 | INFO     | adding to output.list: log.44075483._073493.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/04/log.44075483._073493.job.log.tg
[2025-04-18 19:56:03] 2025-04-18 23:55:47,072 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 19:56:03] 2025-04-18 23:55:47,072 | INFO     | summary of transferred files:
[2025-04-18 19:56:03] 2025-04-18 23:55:47,072 | INFO     |  -- lfn=log.44075483._073493.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 19:56:03] 2025-04-18 23:55:47,073 | INFO     | stage-out finished correctly
[2025-04-18 19:56:03] 2025-04-18 23:55:47,254 | INFO     | PID=1215 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-18 19:56:03] 2025-04-18 23:55:47,282 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 19:56:03] 2025-04-18 23:55:47,363 | INFO     | job 6606785511 has state=finished
[2025-04-18 19:56:03] 2025-04-18 23:55:47,363 | INFO     | preparing for final server update for job 6606785511 in state='finished'
[2025-04-18 19:56:03] 2025-04-18 23:55:47,364 | INFO     | this job has now completed (state=finished)
[2025-04-18 19:56:03] 2025-04-18 23:55:47,364 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 19:56:03] 2025-04-18 23:55:47,364 | INFO     | log transfer has been attempted: DONE
[2025-04-18 19:56:03] 2025-04-18 23:55:47,364 | INFO     | job 6606785511 has finished - writing final server update
[2025-04-18 19:56:03] 2025-04-18 23:55:47,365 | INFO     | total number of processed events: 400 (read)
[2025-04-18 19:56:03] 2025-04-18 23:55:47,366 | INFO     | executing command: lscpu
[2025-04-18 19:56:03] 2025-04-18 23:55:47,391 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 19:56:03] 2025-04-18 23:55:47,574 | INFO     | monitor loop #374: job 0:6606785511 is in state 'finished'
[2025-04-18 19:56:03] 2025-04-18 23:55:47,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 19:56:03] 2025-04-18 23:55:50,078 | INFO     | monitor loop #375: job 0:6606785511 is in state 'finished'
[2025-04-18 19:56:03] 2025-04-18 23:55:50,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 19:56:03] 2025-04-18 23:55:51,882 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 19:56:03] 2025-04-18 23:55:51,894 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606785511/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 19:56:03] 2025-04-18 23:55:51,895 | INFO     | extracted standard info from prmon json
[2025-04-18 19:56:03] 2025-04-18 23:55:51,895 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 19:56:03] 2025-04-18 23:55:51,896 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 19:56:03] 2025-04-18 23:55:51,896 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 19:56:03] 2025-04-18 23:55:51,896 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 19:56:03] 2025-04-18 23:55:51,899 | INFO     | fitting pss+swap vs Time
[2025-04-18 19:56:03] 2025-04-18 23:55:51,899 | INFO     | sum of square deviations: 130793150.0
[2025-04-18 19:56:03] 2025-04-18 23:55:51,900 | INFO     | sum of deviations: 16573153073.999998
[2025-04-18 19:56:03] 2025-04-18 23:55:51,900 | INFO     | mean x: 1745018126.0
[2025-04-18 19:56:03] 2025-04-18 23:55:51,900 | INFO     | mean y: 2646348.6533333333
[2025-04-18 19:56:03] 2025-04-18 23:55:51,900 | INFO     | -- intersect: -221113310558.1313
[2025-04-18 19:56:03] 2025-04-18 23:55:51,900 | INFO     | intersect: -221113310558.1313
[2025-04-18 19:56:03] 2025-04-18 23:55:51,900 | INFO     | chi2: 2.407731997521129
[2025-04-18 19:56:03] 2025-04-18 23:55:51,901 | INFO     | -- intersect: -221113310558.1313
[2025-04-18 19:56:03] 2025-04-18 23:55:51,901 | INFO     | current memory leak: 126.71 B/s (using 75 data points, chi2=2.41)
[2025-04-18 19:56:03] 2025-04-18 23:55:51,901 | INFO     | ..............................
[2025-04-18 19:56:03] 2025-04-18 23:55:51,901 | INFO     | . Timing measurements:
[2025-04-18 19:56:03] 2025-04-18 23:55:51,901 | INFO     | . get job = 0 s
[2025-04-18 19:56:03] 2025-04-18 23:55:51,901 | INFO     | . initial setup = 2 s
[2025-04-18 19:56:03] 2025-04-18 23:55:51,902 | INFO     | . payload setup = 7 s
[2025-04-18 19:56:03] 2025-04-18 23:55:51,902 | INFO     | . stage-in = 0 s
[2025-04-18 19:56:03] 2025-04-18 23:55:51,902 | INFO     | . payload execution = 4983 s
[2025-04-18 19:56:03] 2025-04-18 23:55:51,902 | INFO     | . stage-out = 0 s
[2025-04-18 19:56:03] 2025-04-18 23:55:51,902 | INFO     | . log creation = 0 s
[2025-04-18 19:56:03] 2025-04-18 23:55:51,902 | INFO     | ..............................
[2025-04-18 19:56:03] 2025-04-18 23:55:51,986 | INFO     | 
[2025-04-18 19:56:03] 2025-04-18 23:55:51,986 | INFO     | job summary report
[2025-04-18 19:56:03] 2025-04-18 23:55:51,986 | INFO     | --------------------------------------------------
[2025-04-18 19:56:03] 2025-04-18 23:55:51,987 | INFO     | PanDA job id: 6606785511
[2025-04-18 19:56:03] 2025-04-18 23:55:51,987 | INFO     | task id: 44075483
[2025-04-18 19:56:03] 2025-04-18 23:55:51,987 | INFO     | errors: (none)
[2025-04-18 19:56:03] 2025-04-18 23:55:51,987 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 19:56:03] 2025-04-18 23:55:51,987 | INFO     | pilot state: finished 
[2025-04-18 19:56:03] 2025-04-18 23:55:51,987 | INFO     | transexitcode: 0
[2025-04-18 19:56:03] 2025-04-18 23:55:51,987 | INFO     | exeerrorcode: 0
[2025-04-18 19:56:03] 2025-04-18 23:55:51,988 | INFO     | exeerrordiag: 
[2025-04-18 19:56:03] 2025-04-18 23:55:51,988 | INFO     | exitcode: 0
[2025-04-18 19:56:03] 2025-04-18 23:55:51,988 | INFO     | exitmsg: OK
[2025-04-18 19:56:03] 2025-04-18 23:55:51,988 | INFO     | cpuconsumptiontime: 47116 s
[2025-04-18 19:56:03] 2025-04-18 23:55:51,988 | INFO     | nevents: 400
[2025-04-18 19:56:03] 2025-04-18 23:55:51,988 | INFO     | neventsw: 0
[2025-04-18 19:56:03] 2025-04-18 23:55:51,989 | INFO     | pid: 7725
[2025-04-18 19:56:03] 2025-04-18 23:55:51,989 | INFO     | pgrp: 7725
[2025-04-18 19:56:03] 2025-04-18 23:55:51,989 | INFO     | corecount: 12
[2025-04-18 19:56:03] 2025-04-18 23:55:51,989 | INFO     | event service: False
[2025-04-18 19:56:03] 2025-04-18 23:55:51,989 | INFO     | sizes: {0: 2426823, 5: 2427029, 11: 2427085, 4995: 2453233, 4996: 2462230, 5001: 2462344}
[2025-04-18 19:56:03] 2025-04-18 23:55:51,989 | INFO     | --------------------------------------------------
[2025-04-18 19:56:03] 2025-04-18 23:55:51,989 | INFO     | 
[2025-04-18 19:56:03] 2025-04-18 23:55:51,989 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 19:56:03] 2025-04-18 23:55:52,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,013 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,013 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,013 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,013 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,013 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 19:56:03] 2025-04-18 23:55:52,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,016 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 19:56:03] 2025-04-18 23:55:52,016 | INFO     | job 6606785511 has completed (purged errors)
[2025-04-18 19:56:03] 2025-04-18 23:55:52,016 | INFO     | overall cleanup function is called
[2025-04-18 19:56:03] 2025-04-18 23:55:53,024 | INFO     | --- collectZombieJob: --- 10, [7725]
[2025-04-18 19:56:03] 2025-04-18 23:55:53,025 | INFO     | zombie collector waiting for pid 7725
[2025-04-18 19:56:03] 2025-04-18 23:55:53,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 19:56:03] 2025-04-18 23:55:53,025 | INFO     | collected zombie processes
[2025-04-18 19:56:03] 2025-04-18 23:55:53,025 | INFO     | will attempt to kill all subprocesses of pid=7725
[2025-04-18 19:56:03] 2025-04-18 23:55:53,116 | INFO     | process IDs to be killed: [7725] (in reverse order)
[2025-04-18 19:56:03] 2025-04-18 23:55:53,211 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 19:56:03] 2025-04-18 23:55:53,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 19:56:03] 2025-04-18 23:55:53,215 | INFO     | did not find any defunct processes belonging to 7725
[2025-04-18 19:56:03] 2025-04-18 23:55:53,219 | INFO     | did not find any defunct processes belonging to 7725
[2025-04-18 19:56:03] 2025-04-18 23:55:53,219 | INFO     | ready for new job
[2025-04-18 19:56:03] 2025-04-18 23:55:53,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 19:56:03] 2025-04-18 23:55:53,221 | INFO     | **************************************
[2025-04-18 19:56:03] 2025-04-18 23:55:53,221 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 19:56:03] 2025-04-18 23:55:53,221 | INFO     | **************************************
[2025-04-18 19:56:03] 2025-04-18 23:55:53,221 | INFO     | 
[2025-04-18 19:56:03] 2025-04-18 23:55:53,221 | INFO     | architecture information:
[2025-04-18 19:56:03] 2025-04-18 23:55:53,222 | INFO     | executing command: cat /etc/os-release
[2025-04-18 19:56:03] 2025-04-18 23:55:53,237 | INFO     | cat /etc/os-release:
[2025-04-18 19:56:03] NAME="CentOS Linux"
[2025-04-18 19:56:03] VERSION="7 (Core)"
[2025-04-18 19:56:03] ID="centos"
[2025-04-18 19:56:03] ID_LIKE="rhel fedora"
[2025-04-18 19:56:03] VERSION_ID="7"
[2025-04-18 19:56:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 19:56:03] ANSI_COLOR="0;31"
[2025-04-18 19:56:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 19:56:03] HOME_URL="https://www.centos.org/"
[2025-04-18 19:56:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 19:56:03] 
[2025-04-18 19:56:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 19:56:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 19:56:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 19:56:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 19:56:03] 
[2025-04-18 19:56:03] 2025-04-18 23:55:53,237 | INFO     | **************************************
[2025-04-18 19:56:03] 2025-04-18 23:55:53,740 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 19:56:03] 2025-04-18 23:55:53,756 | INFO     | sufficient remaining disk space (29388439552 B)
[2025-04-18 19:56:03] 2025-04-18 23:55:53,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 19:56:03] 2025-04-18 23:55:53,757 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 19:56:03] 2025-04-18 23:55:53,757 | INFO     | update_server=False
[2025-04-18 19:56:03] 2025-04-18 23:55:53,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 19:56:03] 2025-04-18 23:55:53,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:56:03] 2025-04-18 23:55:53,758 | INFO     | aborting loop
[2025-04-18 19:56:03] 2025-04-18 23:55:53,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:56:03] 2025-04-18 23:55:53,758 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 19:56:03] 2025-04-18 23:55:53,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 19:56:03] 2025-04-18 23:55:53,759 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 19:56:03] 2025-04-18 23:55:53,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 19:56:03] 2025-04-18 23:55:53,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 19:56:03] 2025-04-18 23:55:54,128 | INFO     | all data control threads have been joined
[2025-04-18 19:56:03] 2025-04-18 23:55:54,336 | INFO     | all job control threads have been joined
[2025-04-18 19:56:03] 2025-04-18 23:55:54,763 | INFO     | [job] retrieve thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:54,764 | INFO     | [job] job monitor thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:54,765 | INFO     | [job] queue monitor thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:54,779 | INFO     | [payload] validate_post thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:54,896 | INFO     | [job] validate thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:55,029 | INFO     | all payload control threads have been joined
[2025-04-18 19:56:03] 2025-04-18 23:55:55,108 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:55,134 | INFO     | [data] control thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:55,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 19:56:03] 2025-04-18 23:55:55,341 | INFO     | [job] control thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:55,375 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:55,622 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:55,800 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:55,815 | INFO     | [data] copytool_in thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:55,833 | INFO     | [payload] failed_post thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:56,035 | INFO     | [payload] control thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:57,174 | INFO     | [data] copytool_out thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:57,765 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 19:56:03] 2025-04-18 23:55:57,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460640610112)>', '<ExcThread(monitor, started 140460345497344)>']
[2025-04-18 19:56:03] 2025-04-18 23:55:58,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 19:56:03] 2025-04-18 23:55:58,781 | INFO     | [monitor] control thread has ended
[2025-04-18 19:56:03] 2025-04-18 23:56:02,938 | INFO     | all workflow threads have been joined
[2025-04-18 19:56:03] 2025-04-18 23:56:02,938 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 19:56:03] 2025-04-18 23:56:02,939 | INFO     | traces error code: 0
[2025-04-18 19:56:03] 2025-04-18 23:56:02,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 19:56:03] 2025-04-18 23:56:03,022 [wrapper] ==== pilot stdout END ====
[2025-04-18 19:56:03] 2025-04-18 23:56:03,026 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 19:56:03] 2025-04-18 23:56:03,029 [wrapper] pilotpid: 1215
[2025-04-18 19:56:03] 2025-04-18 23:56:03,033 [wrapper] Pilot exit status: 0
[2025-04-18 19:56:03] 2025-04-18 23:56:03,047 [wrapper] pandaids: 6606785511
[2025-04-18 19:56:03] 2025-04-18 23:56:03,086 [wrapper] cleanup supervisor_pilot 31648 1216
[2025-04-18 19:56:03] 2025-04-18 23:56:03,090 [wrapper] Test setup, not cleaning
[2025-04-18 19:56:03] 2025-04-18 23:56:03,093 [wrapper] apfmon messages muted
[2025-04-18 19:56:03] 2025-04-18 23:56:03,097 [wrapper] ==== wrapper stdout END ====
[2025-04-18 19:56:03] 2025-04-18 23:56:03,100 [wrapper] ==== wrapper stderr END ====
[2025-04-18 19:56:03]  *** Error codes and diagnostics ***
[2025-04-18 19:56:03]     "exeErrorCode": 0,
[2025-04-18 19:56:03]     "exeErrorDiag": "",
[2025-04-18 19:56:03]     "pilotErrorCode": 0,
[2025-04-18 19:56:03]     "pilotErrorDiag": "",
[2025-04-18 19:56:03]  *** Listing of results directory ***
[2025-04-18 19:56:03] total 419716
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 15:39 pilot3.tar.gz
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 15:45 queuedata.json
[2025-04-18 19:56:03] -rwx------ 1 boincer umatlas     37140 Apr 18 15:47 runpilot2-wrapper.sh
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas       100 Apr 18 18:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 19:56:03] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 18:31 run_atlas
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas       105 Apr 18 18:31 job.xml
[2025-04-18 19:56:03] -rw-r--r-- 2 boincer umatlas 226721576 Apr 18 18:32 EVNT.44075481._002855.pool.root.1
[2025-04-18 19:56:03] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:32 start_atlas.sh
[2025-04-18 19:56:03] drwxrwx--x 2 boincer umatlas      4096 Apr 18 18:32 shared
[2025-04-18 19:56:03] -rw-r--r-- 2 boincer umatlas    508898 Apr 18 18:32 input.tar.gz
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas         0 Apr 18 18:32 boinc_lockfile
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 18:32 pandaJob.out
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas       424 Apr 18 18:32 setup.sh.local
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas    991300 Apr 18 18:32 agis_schedconf.cvmfs.json
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas   1618536 Apr 18 18:32 agis_ddmendpoints.agis.ALL.json
[2025-04-18 19:56:03] drwx------ 4 boincer umatlas      4096 Apr 18 18:32 pilot3
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas 197545316 Apr 18 19:55 HITS.44075483._073493.pool.root.1
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas        95 Apr 18 19:55 pilot_heartbeat.json
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas       530 Apr 18 19:55 boinc_task_state.xml
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas      1047 Apr 18 19:55 memory_monitor_summary.json
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 19:55 init_data.xml
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas    356925 Apr 18 19:55 log.44075483._073493.job.log.tgz.1
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas      7752 Apr 18 19:55 heartbeat.json
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas        27 Apr 18 19:56 wrapper_checkpoint.txt
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 19:56 boinc_mmap_file
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas      4476 Apr 18 19:56 pilotlog.txt
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas    474827 Apr 18 19:56 log.44075483._073493.job.log.1
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas       357 Apr 18 19:56 output.list
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas       620 Apr 18 19:56 runtime_log
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas    849920 Apr 18 19:56 result.tar.gz
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas       658 Apr 18 19:56 Td1NDmFr6P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmb2fLDmNn4dOo.diag
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 19:56 runtime_log.err
[2025-04-18 19:56:03] -rw-r--r-- 1 boincer umatlas     21286 Apr 18 19:56 stderr.txt
[2025-04-18 19:56:03] HITS file was successfully produced:
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas 197545316 Apr 18 19:55 shared/HITS.pool.root.1
[2025-04-18 19:56:03]  *** Contents of shared directory: ***
[2025-04-18 19:56:03] total 415676
[2025-04-18 19:56:03] -rw-r--r-- 2 boincer umatlas 226721576 Apr 18 18:32 ATLAS.root_0
[2025-04-18 19:56:03] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:32 start_atlas.sh
[2025-04-18 19:56:03] -rw-r--r-- 2 boincer umatlas    508898 Apr 18 18:32 input.tar.gz
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas 197545316 Apr 18 19:55 HITS.pool.root.1
[2025-04-18 19:56:03] -rw------- 1 boincer umatlas    849920 Apr 18 19:56 result.tar.gz
19:56:04 (30012): run_atlas exited; CPU time 47106.746455
19:56:04 (30012): called boinc_finish(0)

</stderr_txt>
]]>

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