Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:26:23 (25934): wrapper (7.7.26015): starting
18:26:23 (25934): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 18:26:23] Arguments: --nthreads 8
[2025-04-18 18:26:23] Threads: 8
[2025-04-18 18:26:23] Checking for CVMFS
[2025-04-18 18:26:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 18:26:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 18:26:23] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 18:26:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 18:26:23] 2.11.2.0 2832 148594 122380 145018 1 56 12613387 20275200 1 130560 0 18704845 99.973 8159334 44062 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 18:26:23] CVMFS is ok
[2025-04-18 18:26:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 18:26:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 18:26:23] Further information can be found at the LHC@home message board.
[2025-04-18 18:26:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 18:26:23] Checking for apptainer binary...
[2025-04-18 18:26:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 18:26:23] Running /usr/bin/apptainer --version
[2025-04-18 18:26:23] apptainer version 1.3.2-1.el7
[2025-04-18 18:26:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 18:26:25] c-204-35.aglt2.org
[2025-04-18 18:26:25] apptainer works
[2025-04-18 18:26:25] Set ATHENA_PROC_NUMBER=8
[2025-04-18 18:26:25] Set ATHENA_CORE_NUMBER=8
[2025-04-18 18:26:25] Starting ATLAS job with PandaID=6606784562
[2025-04-18 18:26:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 20:32:37]  *** The last 200 lines of the pilot log: ***
[2025-04-18 20:32:37] 2025-04-19 00:32:21,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 20:32:37] 2025-04-19 00:32:21,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 20:32:37] 2025-04-19 00:32:21,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 20:32:37] 2025-04-19 00:32:21,970 | INFO     | fitting pss+swap vs Time
[2025-04-18 20:32:37] 2025-04-19 00:32:21,971 | INFO     | sum of square deviations: 576985702.0
[2025-04-18 20:32:37] 2025-04-19 00:32:21,972 | INFO     | sum of deviations: 9092103314.000006
[2025-04-18 20:32:37] 2025-04-19 00:32:21,972 | INFO     | mean x: 1745018953.0
[2025-04-18 20:32:37] 2025-04-19 00:32:21,972 | INFO     | mean y: 2538622.8943089433
[2025-04-18 20:32:37] 2025-04-19 00:32:21,972 | INFO     | -- intersect: -27495356993.18132
[2025-04-18 20:32:37] 2025-04-19 00:32:21,972 | INFO     | intersect: -27495356993.18132
[2025-04-18 20:32:37] 2025-04-19 00:32:21,973 | INFO     | chi2: 2.7025522602402408
[2025-04-18 20:32:37] 2025-04-19 00:32:21,973 | INFO     | sum of square deviations: 509440249.5
[2025-04-18 20:32:37] 2025-04-19 00:32:21,974 | INFO     | sum of deviations: 9583847646.499996
[2025-04-18 20:32:37] 2025-04-19 00:32:21,974 | INFO     | mean x: 1745018800.5
[2025-04-18 20:32:37] 2025-04-19 00:32:21,974 | INFO     | mean y: 2539733.754237288
[2025-04-18 20:32:37] 2025-04-19 00:32:21,974 | INFO     | -- intersect: -32825636565.005547
[2025-04-18 20:32:37] 2025-04-19 00:32:21,974 | INFO     | intersect: -32825636565.005547
[2025-04-18 20:32:37] 2025-04-19 00:32:21,975 | INFO     | chi2: 2.7082919041277607
[2025-04-18 20:32:37] 2025-04-19 00:32:21,975 | INFO     | current chi2=2.7082919041277607 (change=-0.2123786456218126 %)
[2025-04-18 20:32:37] 2025-04-19 00:32:21,975 | INFO     | right removable region: 117
[2025-04-18 20:32:37] 2025-04-19 00:32:21,975 | INFO     | sum of square deviations: 509440249.5
[2025-04-18 20:32:37] 2025-04-19 00:32:21,976 | INFO     | sum of deviations: -20725988360.999985
[2025-04-18 20:32:37] 2025-04-19 00:32:21,976 | INFO     | mean x: 1745019105.5
[2025-04-18 20:32:37] 2025-04-19 00:32:21,976 | INFO     | mean y: 2605585.661016949
[2025-04-18 20:32:37] 2025-04-19 00:32:21,977 | INFO     | -- intersect: 70996693127.4535
[2025-04-18 20:32:37] 2025-04-19 00:32:21,977 | INFO     | intersect: 70996693127.4535
[2025-04-18 20:32:37] 2025-04-19 00:32:21,977 | INFO     | chi2: 0.24775211358370974
[2025-04-18 20:32:37] 2025-04-19 00:32:21,977 | INFO     | current chi2=0.24775211358370974 (change=90.83266150932133 %)
[2025-04-18 20:32:37] 2025-04-19 00:32:21,978 | INFO     | sum of square deviations: 447383272.0
[2025-04-18 20:32:37] 2025-04-19 00:32:21,978 | INFO     | sum of deviations: -24543987571.999996
[2025-04-18 20:32:37] 2025-04-19 00:32:21,978 | INFO     | mean x: 1745019258.0
[2025-04-18 20:32:37] 2025-04-19 00:32:21,979 | INFO     | mean y: 2614682.6725663715
[2025-04-18 20:32:37] 2025-04-19 00:32:21,979 | INFO     | -- intersect: 95736482401.47421
[2025-04-18 20:32:37] 2025-04-19 00:32:21,979 | INFO     | intersect: 95736482401.47421
[2025-04-18 20:32:37] 2025-04-19 00:32:21,979 | INFO     | chi2: 0.09916586723540669
[2025-04-18 20:32:37] 2025-04-19 00:32:21,979 | INFO     | current chi2=0.09916586723540669 (change=59.97375529880159 %)
[2025-04-18 20:32:37] 2025-04-19 00:32:21,980 | INFO     | sum of square deviations: 390582207.0
[2025-04-18 20:32:37] 2025-04-19 00:32:21,980 | INFO     | sum of deviations: -22257211581.000008
[2025-04-18 20:32:37] 2025-04-19 00:32:21,980 | INFO     | mean x: 1745019410.5
[2025-04-18 20:32:37] 2025-04-19 00:32:21,980 | INFO     | mean y: 2608526.1666666665
[2025-04-18 20:32:37] 2025-04-19 00:32:21,980 | INFO     | -- intersect: 99442023677.12465
[2025-04-18 20:32:37] 2025-04-19 00:32:21,981 | INFO     | intersect: 99442023677.12465
[2025-04-18 20:32:37] 2025-04-19 00:32:21,981 | INFO     | chi2: 0.0974078433193237
[2025-04-18 20:32:37] 2025-04-19 00:32:21,981 | INFO     | current chi2=0.0974078433193237 (change=1.7728115178075012 %)
[2025-04-18 20:32:37] 2025-04-19 00:32:21,981 | INFO     | left removable region: 30
[2025-04-18 20:32:37] 2025-04-19 00:32:21,981 | INFO     | sum of square deviations: 204163828.0
[2025-04-18 20:32:37] 2025-04-19 00:32:21,982 | INFO     | sum of deviations: -12532301953.0
[2025-04-18 20:32:37] 2025-04-19 00:32:21,982 | INFO     | mean x: 1745019685.0
[2025-04-18 20:32:37] 2025-04-19 00:32:21,982 | INFO     | mean y: 2585207.5862068967
[2025-04-18 20:32:37] 2025-04-19 00:32:21,982 | INFO     | -- intersect: 107118100333.74727
[2025-04-18 20:32:37] 2025-04-19 00:32:21,982 | INFO     | intersect: 107118100333.74727
[2025-04-18 20:32:37] 2025-04-19 00:32:21,982 | INFO     | chi2: 0.08921871078654624
[2025-04-18 20:32:37] 2025-04-19 00:32:21,983 | INFO     | -- intersect: 107118100333.74727
[2025-04-18 20:32:37] 2025-04-19 00:32:21,983 | INFO     | current memory leak: -61.38 B/s (using 87 data points, chi2=0.09)
[2025-04-18 20:32:37] 2025-04-19 00:32:21,983 | INFO     | ..............................
[2025-04-18 20:32:37] 2025-04-19 00:32:21,983 | INFO     | . Timing measurements:
[2025-04-18 20:32:37] 2025-04-19 00:32:21,983 | INFO     | . get job = 0 s
[2025-04-18 20:32:37] 2025-04-19 00:32:21,983 | INFO     | . initial setup = 2 s
[2025-04-18 20:32:37] 2025-04-19 00:32:21,984 | INFO     | . payload setup = 8 s
[2025-04-18 20:32:37] 2025-04-19 00:32:21,984 | INFO     | . stage-in = 0 s
[2025-04-18 20:32:37] 2025-04-19 00:32:21,984 | INFO     | . payload execution = 7503 s
[2025-04-18 20:32:37] 2025-04-19 00:32:21,984 | INFO     | . stage-out = 0 s
[2025-04-18 20:32:37] 2025-04-19 00:32:21,984 | INFO     | . log creation = 0 s
[2025-04-18 20:32:37] 2025-04-19 00:32:21,984 | INFO     | ..............................
[2025-04-18 20:32:37] 2025-04-19 00:32:22,544 | INFO     | 
[2025-04-18 20:32:37] 2025-04-19 00:32:22,544 | INFO     | job summary report
[2025-04-18 20:32:37] 2025-04-19 00:32:22,544 | INFO     | --------------------------------------------------
[2025-04-18 20:32:37] 2025-04-19 00:32:22,544 | INFO     | PanDA job id: 6606784562
[2025-04-18 20:32:37] 2025-04-19 00:32:22,545 | INFO     | task id: 44075483
[2025-04-18 20:32:37] 2025-04-19 00:32:22,545 | INFO     | errors: (none)
[2025-04-18 20:32:37] 2025-04-19 00:32:22,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 20:32:37] 2025-04-19 00:32:22,545 | INFO     | pilot state: finished 
[2025-04-18 20:32:37] 2025-04-19 00:32:22,545 | INFO     | transexitcode: 0
[2025-04-18 20:32:37] 2025-04-19 00:32:22,545 | INFO     | exeerrorcode: 0
[2025-04-18 20:32:37] 2025-04-19 00:32:22,546 | INFO     | exeerrordiag: 
[2025-04-18 20:32:37] 2025-04-19 00:32:22,546 | INFO     | exitcode: 0
[2025-04-18 20:32:37] 2025-04-19 00:32:22,546 | INFO     | exitmsg: OK
[2025-04-18 20:32:37] 2025-04-19 00:32:22,546 | INFO     | cpuconsumptiontime: 54908 s
[2025-04-18 20:32:37] 2025-04-19 00:32:22,546 | INFO     | nevents: 400
[2025-04-18 20:32:37] 2025-04-19 00:32:22,546 | INFO     | neventsw: 0
[2025-04-18 20:32:37] 2025-04-19 00:32:22,547 | INFO     | pid: 4179
[2025-04-18 20:32:37] 2025-04-19 00:32:22,547 | INFO     | pgrp: 4179
[2025-04-18 20:32:37] 2025-04-19 00:32:22,547 | INFO     | corecount: 8
[2025-04-18 20:32:37] 2025-04-19 00:32:22,547 | INFO     | event service: False
[2025-04-18 20:32:37] 2025-04-19 00:32:22,547 | INFO     | sizes: {0: 2426652, 1: 2426851, 6: 2427057, 11: 2427085, 7516: 2454455, 7517: 2463396, 7518: 2463580, 7524: 2463750}
[2025-04-18 20:32:37] 2025-04-19 00:32:22,548 | INFO     | --------------------------------------------------
[2025-04-18 20:32:37] 2025-04-19 00:32:22,548 | INFO     | 
[2025-04-18 20:32:37] 2025-04-19 00:32:22,548 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 20:32:37] 2025-04-19 00:32:22,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,580 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,580 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,580 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 20:32:37] 2025-04-19 00:32:22,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,581 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 20:32:37] 2025-04-19 00:32:22,581 | INFO     | job 6606784562 has completed (purged errors)
[2025-04-18 20:32:37] 2025-04-19 00:32:22,581 | INFO     | overall cleanup function is called
[2025-04-18 20:32:37] 2025-04-19 00:32:23,590 | INFO     | --- collectZombieJob: --- 10, [4179]
[2025-04-18 20:32:37] 2025-04-19 00:32:23,590 | INFO     | zombie collector waiting for pid 4179
[2025-04-18 20:32:37] 2025-04-19 00:32:23,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 20:32:37] 2025-04-19 00:32:23,590 | INFO     | collected zombie processes
[2025-04-18 20:32:37] 2025-04-19 00:32:23,590 | INFO     | will attempt to kill all subprocesses of pid=4179
[2025-04-18 20:32:37] 2025-04-19 00:32:23,680 | INFO     | process IDs to be killed: [4179] (in reverse order)
[2025-04-18 20:32:37] 2025-04-19 00:32:23,735 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 20:32:37] 2025-04-19 00:32:23,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 20:32:37] 2025-04-19 00:32:23,746 | INFO     | did not find any defunct processes belonging to 4179
[2025-04-18 20:32:37] 2025-04-19 00:32:23,749 | INFO     | did not find any defunct processes belonging to 4179
[2025-04-18 20:32:37] 2025-04-19 00:32:23,749 | INFO     | ready for new job
[2025-04-18 20:32:37] 2025-04-19 00:32:23,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 20:32:37] 2025-04-19 00:32:23,751 | INFO     | **************************************
[2025-04-18 20:32:37] 2025-04-19 00:32:23,752 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 20:32:37] 2025-04-19 00:32:23,752 | INFO     | **************************************
[2025-04-18 20:32:37] 2025-04-19 00:32:23,752 | INFO     | 
[2025-04-18 20:32:37] 2025-04-19 00:32:23,752 | INFO     | architecture information:
[2025-04-18 20:32:37] 2025-04-19 00:32:23,753 | INFO     | executing command: cat /etc/os-release
[2025-04-18 20:32:37] 2025-04-19 00:32:23,772 | INFO     | cat /etc/os-release:
[2025-04-18 20:32:37] NAME="CentOS Linux"
[2025-04-18 20:32:37] VERSION="7 (Core)"
[2025-04-18 20:32:37] ID="centos"
[2025-04-18 20:32:37] ID_LIKE="rhel fedora"
[2025-04-18 20:32:37] VERSION_ID="7"
[2025-04-18 20:32:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 20:32:37] ANSI_COLOR="0;31"
[2025-04-18 20:32:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 20:32:37] HOME_URL="https://www.centos.org/"
[2025-04-18 20:32:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 20:32:37] 
[2025-04-18 20:32:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 20:32:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 20:32:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 20:32:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 20:32:37] 
[2025-04-18 20:32:37] 2025-04-19 00:32:23,772 | INFO     | **************************************
[2025-04-18 20:32:37] 2025-04-19 00:32:23,885 | INFO     | PID=29543 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 20:32:37] 2025-04-19 00:32:24,273 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 20:32:37] 2025-04-19 00:32:24,306 | INFO     | sufficient remaining disk space (18588106752 B)
[2025-04-18 20:32:37] 2025-04-19 00:32:24,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 20:32:37] 2025-04-19 00:32:24,307 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 20:32:37] 2025-04-19 00:32:24,307 | INFO     | update_server=False
[2025-04-18 20:32:37] 2025-04-19 00:32:24,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 20:32:37] 2025-04-19 00:32:24,308 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 20:32:37] 2025-04-19 00:32:24,308 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 20:32:37] 2025-04-19 00:32:24,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 20:32:37] 2025-04-19 00:32:24,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 20:32:37] 2025-04-19 00:32:24,354 | INFO     | all payload control threads have been joined
[2025-04-18 20:32:37] 2025-04-19 00:32:24,602 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 20:32:37] 2025-04-19 00:32:24,602 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 20:32:37] 2025-04-19 00:32:24,602 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 20:32:37] 2025-04-19 00:32:24,603 | INFO     | will abort loop
[2025-04-18 20:32:37] 2025-04-19 00:32:24,731 | INFO     | all job control threads have been joined
[2025-04-18 20:32:37] 2025-04-19 00:32:24,843 | INFO     | all data control threads have been joined
[2025-04-18 20:32:37] 2025-04-19 00:32:25,313 | INFO     | [job] retrieve thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:25,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 20:32:37] 2025-04-19 00:32:25,356 | INFO     | [payload] control thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:25,480 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:25,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:25,608 | INFO     | [job] job monitor thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:25,736 | INFO     | [job] control thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:25,848 | INFO     | [data] control thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:26,037 | INFO     | [payload] validate_post thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:26,145 | INFO     | [payload] failed_post thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:26,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 20:32:37] 2025-04-19 00:32:26,476 | INFO     | [job] validate thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:26,736 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:26,810 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:26,811 | INFO     | [data] copytool_in thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:27,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 20:32:37] 2025-04-19 00:32:27,335 | INFO     | [data] copytool_out thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:28,094 | INFO     | [job] queue monitor thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:30,340 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 20:32:37] 2025-04-19 00:32:32,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685796779840)>', '<ExcThread(monitor, started 139685036791552)>']
[2025-04-18 20:32:37] 2025-04-19 00:32:32,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 20:32:37] 2025-04-19 00:32:32,351 | INFO     | [monitor] control thread has ended
[2025-04-18 20:32:37] 2025-04-19 00:32:37,185 | INFO     | all workflow threads have been joined
[2025-04-18 20:32:37] 2025-04-19 00:32:37,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 20:32:37] 2025-04-19 00:32:37,186 | INFO     | traces error code: 0
[2025-04-18 20:32:37] 2025-04-19 00:32:37,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 20:32:37] 2025-04-19 00:32:37,309 [wrapper] ==== pilot stdout END ====
[2025-04-18 20:32:37] 2025-04-19 00:32:37,314 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 20:32:37] 2025-04-19 00:32:37,318 [wrapper] pilotpid: 29543
[2025-04-18 20:32:37] 2025-04-19 00:32:37,322 [wrapper] Pilot exit status: 0
[2025-04-18 20:32:37] 2025-04-19 00:32:37,342 [wrapper] pandaids: 6606784562
[2025-04-18 20:32:37] 2025-04-19 00:32:37,383 [wrapper] cleanup supervisor_pilot 30989 29544
[2025-04-18 20:32:37] 2025-04-19 00:32:37,388 [wrapper] Test setup, not cleaning
[2025-04-18 20:32:37] 2025-04-19 00:32:37,393 [wrapper] apfmon messages muted
[2025-04-18 20:32:37] 2025-04-19 00:32:37,398 [wrapper] ==== wrapper stdout END ====
[2025-04-18 20:32:37] 2025-04-19 00:32:37,402 [wrapper] ==== wrapper stderr END ====
[2025-04-18 20:32:37]  *** Error codes and diagnostics ***
[2025-04-18 20:32:37]     "exeErrorCode": 0,
[2025-04-18 20:32:37]     "exeErrorDiag": "",
[2025-04-18 20:32:37]     "pilotErrorCode": 0,
[2025-04-18 20:32:37]     "pilotErrorDiag": "",
[2025-04-18 20:32:37]  *** Listing of results directory ***
[2025-04-18 20:32:37] total 413528
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 15:19 pilot3.tar.gz
[2025-04-18 20:32:37] -rwx------ 1 boincer umatlas     37140 Apr 18 15:38 runpilot2-wrapper.sh
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 15:38 queuedata.json
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas       100 Apr 18 18:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 20:32:37] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 18:26 run_atlas
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas       105 Apr 18 18:26 job.xml
[2025-04-18 20:32:37] -rw-r--r-- 2 boincer umatlas 223118978 Apr 18 18:26 EVNT.44075481._002852.pool.root.1
[2025-04-18 20:32:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:26 start_atlas.sh
[2025-04-18 20:32:37] drwxrwx--x 2 boincer umatlas      4096 Apr 18 18:26 shared
[2025-04-18 20:32:37] -rw-r--r-- 2 boincer umatlas    508892 Apr 18 18:26 input.tar.gz
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas         0 Apr 18 18:26 boinc_lockfile
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 18:26 pandaJob.out
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas       462 Apr 18 18:26 setup.sh.local
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas    991300 Apr 18 18:26 agis_schedconf.cvmfs.json
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas   1618536 Apr 18 18:26 agis_ddmendpoints.agis.ALL.json
[2025-04-18 20:32:37] drwx------ 4 boincer umatlas      4096 Apr 18 18:26 pilot3
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas      5905 Apr 18 20:28 init_data.xml
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas        95 Apr 18 20:31 pilot_heartbeat.json
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas 194390539 Apr 18 20:31 HITS.44075483._073436.pool.root.1
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas       529 Apr 18 20:32 boinc_task_state.xml
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas      1048 Apr 18 20:32 memory_monitor_summary.json
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas    344830 Apr 18 20:32 log.44075483._073436.job.log.tgz.1
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas      7752 Apr 18 20:32 heartbeat.json
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 20:32 boinc_mmap_file
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas        27 Apr 18 20:32 wrapper_checkpoint.txt
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas      4979 Apr 18 20:32 pilotlog.txt
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas    692943 Apr 18 20:32 log.44075483._073436.job.log.1
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas       357 Apr 18 20:32 output.list
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas       620 Apr 18 20:32 runtime_log
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas   1054720 Apr 18 20:32 result.tar.gz
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas       658 Apr 18 20:32 XAEODm6i6P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmsW5KDmTtffcn.diag
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas     11388 Apr 18 20:32 runtime_log.err
[2025-04-18 20:32:37] -rw-r--r-- 1 boincer umatlas     20915 Apr 18 20:32 stderr.txt
[2025-04-18 20:32:37] HITS file was successfully produced:
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas 194390539 Apr 18 20:31 shared/HITS.pool.root.1
[2025-04-18 20:32:37]  *** Contents of shared directory: ***
[2025-04-18 20:32:37] total 409284
[2025-04-18 20:32:37] -rw-r--r-- 2 boincer umatlas 223118978 Apr 18 18:26 ATLAS.root_0
[2025-04-18 20:32:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:26 start_atlas.sh
[2025-04-18 20:32:37] -rw-r--r-- 2 boincer umatlas    508892 Apr 18 18:26 input.tar.gz
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas 194390539 Apr 18 20:31 HITS.pool.root.1
[2025-04-18 20:32:37] -rw------- 1 boincer umatlas   1054720 Apr 18 20:32 result.tar.gz
20:32:38 (25934): run_atlas exited; CPU time 54849.987297
20:32:38 (25934): called boinc_finish(0)

</stderr_txt>
]]>

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