Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:55:39 (1565513): wrapper (7.7.26015): starting
10:55:39 (1565513): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 10:55:39] Arguments: --nthreads 4
[2025-04-19 10:55:39] Threads: 4
[2025-04-19 10:55:39] Checking for CVMFS
[2025-04-19 10:55:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 10:55:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 10:55:39] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 10:55:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 10:55:39] 2.9.2.0 2951 5342 100360 145031 1 56 23535425 36864000 0 130560 0 3989200 99.989 1302695 11820 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 10:55:39] CVMFS is ok
[2025-04-19 10:55:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 10:55:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 10:55:39] Further information can be found at the LHC@home message board.
[2025-04-19 10:55:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 10:55:39] Checking for apptainer binary...
[2025-04-19 10:55:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 10:55:39] Running /usr/bin/apptainer --version
[2025-04-19 10:55:39] apptainer version 1.3.6-6.1
[2025-04-19 10:55:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 10:55:39] iaxoA393
[2025-04-19 10:55:39] apptainer works
[2025-04-19 10:55:40] Set ATHENA_PROC_NUMBER=4
[2025-04-19 10:55:40] Set ATHENA_CORE_NUMBER=4
[2025-04-19 10:55:40] Starting ATLAS job with PandaID=6606629506
[2025-04-19 10:55:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 12:12:20]  *** The last 200 lines of the pilot log: ***
[2025-04-19 12:12:20]  status=None
[2025-04-19 12:12:20]  status_code=0
[2025-04-19 12:12:20]  storage_token=
[2025-04-19 12:12:20]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606629506/log.44075483._070943.job.log.tgz.1
[2025-04-19 12:12:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/44/log.44075483._070943.job.log.tgz.1
[2025-04-19 12:12:20]  workdir=None
[2025-04-19 12:12:20] ]
[2025-04-19 12:12:20] 2025-04-19 10:11:56,159 | INFO     | transferring file log.44075483._070943.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606629506/log.44075483._070943.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 12:12:20] 2025-04-19 10:11:56,159 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606629506/log.44075483._070943.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0709
[2025-04-19 12:12:20] 2025-04-19 10:11:56,177 | INFO     | adding to output.list: log.44075483._070943.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/44/log.44075483._070943.job.log.tg
[2025-04-19 12:12:20] 2025-04-19 10:11:56,178 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 12:12:20] 2025-04-19 10:11:56,178 | INFO     | summary of transferred files:
[2025-04-19 12:12:20] 2025-04-19 10:11:56,178 | INFO     |  -- lfn=log.44075483._070943.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 12:12:20] 2025-04-19 10:11:56,178 | INFO     | stage-out finished correctly
[2025-04-19 12:12:20] 2025-04-19 10:11:56,218 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 12:12:20] 2025-04-19 10:11:56,257 | INFO     | job 6606629506 has state=finished
[2025-04-19 12:12:20] 2025-04-19 10:11:56,257 | INFO     | preparing for final server update for job 6606629506 in state='finished'
[2025-04-19 12:12:20] 2025-04-19 10:11:56,257 | INFO     | this job has now completed (state=finished)
[2025-04-19 12:12:20] 2025-04-19 10:11:56,257 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 12:12:20] 2025-04-19 10:11:56,257 | INFO     | log transfer has been attempted: DONE
[2025-04-19 12:12:20] 2025-04-19 10:11:56,257 | INFO     | job 6606629506 has finished - writing final server update
[2025-04-19 12:12:20] 2025-04-19 10:11:56,258 | INFO     | total number of processed events: 400 (read)
[2025-04-19 12:12:20] 2025-04-19 10:11:56,259 | INFO     | executing command: lscpu
[2025-04-19 12:12:20] 2025-04-19 10:11:56,278 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 12:12:20] 2025-04-19 10:11:58,802 | WARNING  | process 1575820 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 12:12:20] 2025-04-19 10:11:58,802 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606629506/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 12:12:20] 2025-04-19 10:11:58,802 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606629506/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 12:12:20] 2025-04-19 10:11:58,803 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2798346 B
[2025-04-19 12:12:20] 2025-04-19 10:11:58,804 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15550 B
[2025-04-19 12:12:20] 2025-04-19 10:11:58,804 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 12:12:20] 2025-04-19 10:12:00,862 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 12:12:20] 2025-04-19 10:12:00,862 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606629506/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,865 | INFO     | extracted standard info from prmon json
[2025-04-19 12:12:20] 2025-04-19 10:12:00,866 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 12:12:20] 2025-04-19 10:12:00,866 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 12:12:20] 2025-04-19 10:12:00,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 12:12:20] 2025-04-19 10:12:00,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 12:12:20] 2025-04-19 10:12:00,867 | INFO     | fitting pss+swap vs Time
[2025-04-19 12:12:20] 2025-04-19 10:12:00,867 | INFO     | sum of square deviations: 97479037.0
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | sum of deviations: 6088992061.999998
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | mean x: 1745055318.5
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | mean y: 2368371.3235294116
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | -- intersect: -109001867914.85744
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | intersect: -109001867914.85744
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | chi2: 0.9267688851356954
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | -- intersect: -109001867914.85744
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | current memory leak: 62.46 B/s (using 68 data points, chi2=0.93)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | ..............................
[2025-04-19 12:12:20] 2025-04-19 10:12:00,868 | INFO     | . Timing measurements:
[2025-04-19 12:12:20] 2025-04-19 10:12:00,869 | INFO     | . get job = 0 s
[2025-04-19 12:12:20] 2025-04-19 10:12:00,869 | INFO     | . initial setup = 1 s
[2025-04-19 12:12:20] 2025-04-19 10:12:00,869 | INFO     | . payload setup = 4 s
[2025-04-19 12:12:20] 2025-04-19 10:12:00,869 | INFO     | . stage-in = 0 s
[2025-04-19 12:12:20] 2025-04-19 10:12:00,869 | INFO     | . payload execution = 4546 s
[2025-04-19 12:12:20] 2025-04-19 10:12:00,869 | INFO     | . stage-out = 0 s
[2025-04-19 12:12:20] 2025-04-19 10:12:00,869 | INFO     | . log creation = 0 s
[2025-04-19 12:12:20] 2025-04-19 10:12:00,869 | INFO     | ..............................
[2025-04-19 12:12:20] 2025-04-19 10:12:00,886 | INFO     | sufficient remaining disk space (331620548608 B)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,901 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,912 | INFO     | 
[2025-04-19 12:12:20] 2025-04-19 10:12:00,912 | INFO     | job summary report
[2025-04-19 12:12:20] 2025-04-19 10:12:00,912 | INFO     | --------------------------------------------------
[2025-04-19 12:12:20] 2025-04-19 10:12:00,912 | INFO     | PanDA job id: 6606629506
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | task id: 44075483
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | errors: (none)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | pilot state: finished 
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | transexitcode: 0
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | exeerrorcode: 0
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | exeerrordiag: 
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | exitcode: 0
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | exitmsg: OK
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | cpuconsumptiontime: 15545 s
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | nevents: 400
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | neventsw: 0
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | pid: 1575820
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | pgrp: 1575820
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | corecount: 4
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | event service: False
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | sizes: {0: 2426827, 3: 2427033, 11: 2427061, 4554: 2462159, 4555: 2462159, 4559: 2462329}
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | --------------------------------------------------
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | 
[2025-04-19 12:12:20] 2025-04-19 10:12:00,913 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 12:12:20] 2025-04-19 10:12:00,917 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6606629506: 3094205 B (within 2537553920 B limit)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,918 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6606629506/HITS.44075483._070943.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,918 | INFO     | total size of present files: 0 B (workdir size: 3094205 B)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,918 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6606629506/HITS.44075483._070943.pool.root.1 since it does not exist
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,932 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,932 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 12:12:20] 2025-04-19 10:12:00,932 | INFO     | job 6606629506 has completed (purged errors)
[2025-04-19 12:12:20] 2025-04-19 10:12:00,932 | INFO     | overall cleanup function is called
[2025-04-19 12:12:20] 2025-04-19 10:12:00,966 | INFO     | number of running child processes to parent process 1575820: 1
[2025-04-19 12:12:20] 2025-04-19 10:12:00,966 | INFO     | maximum number of monitored processes: 6
[2025-04-19 12:12:20] 2025-04-19 10:12:00,966 | INFO     | aborting job monitoring since job object (job id=6606629506) has expired
[2025-04-19 12:12:20] 2025-04-19 10:12:01,939 | INFO     | --- collectZombieJob: --- 10, [1575820]
[2025-04-19 12:12:20] 2025-04-19 10:12:01,939 | INFO     | zombie collector waiting for pid 1575820
[2025-04-19 12:12:20] 2025-04-19 10:12:01,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 12:12:20] 2025-04-19 10:12:01,939 | INFO     | collected zombie processes
[2025-04-19 12:12:20] 2025-04-19 10:12:01,939 | INFO     | will attempt to kill all subprocesses of pid=1575820
[2025-04-19 12:12:20] 2025-04-19 10:12:01,984 | INFO     | process IDs to be killed: [1575820] (in reverse order)
[2025-04-19 12:12:20] 2025-04-19 10:12:02,016 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 12:12:20] 2025-04-19 10:12:02,017 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 12:12:20] 2025-04-19 10:12:02,018 | INFO     | did not find any defunct processes belonging to 1575820
[2025-04-19 12:12:20] 2025-04-19 10:12:02,020 | INFO     | did not find any defunct processes belonging to 1575820
[2025-04-19 12:12:20] 2025-04-19 10:12:02,020 | INFO     | ready for new job
[2025-04-19 12:12:20] 2025-04-19 10:12:02,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 12:12:20] 2025-04-19 10:12:02,020 | INFO     | **************************************
[2025-04-19 12:12:20] 2025-04-19 10:12:02,020 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 12:12:20] 2025-04-19 10:12:02,020 | INFO     | **************************************
[2025-04-19 12:12:20] 2025-04-19 10:12:02,020 | INFO     | 
[2025-04-19 12:12:20] 2025-04-19 10:12:02,021 | INFO     | architecture information:
[2025-04-19 12:12:20] 2025-04-19 10:12:02,021 | INFO     | executing command: cat /etc/os-release
[2025-04-19 12:12:20] 2025-04-19 10:12:02,034 | INFO     | cat /etc/os-release:
[2025-04-19 12:12:20] NAME="CentOS Linux"
[2025-04-19 12:12:20] VERSION="7 (Core)"
[2025-04-19 12:12:20] ID="centos"
[2025-04-19 12:12:20] ID_LIKE="rhel fedora"
[2025-04-19 12:12:20] VERSION_ID="7"
[2025-04-19 12:12:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 12:12:20] ANSI_COLOR="0;31"
[2025-04-19 12:12:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 12:12:20] HOME_URL="https://www.centos.org/"
[2025-04-19 12:12:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 12:12:20] 
[2025-04-19 12:12:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 12:12:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 12:12:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 12:12:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 12:12:20] 
[2025-04-19 12:12:20] 2025-04-19 10:12:02,034 | INFO     | **************************************
[2025-04-19 12:12:20] 2025-04-19 10:12:02,537 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 12:12:20] 2025-04-19 10:12:02,554 | INFO     | sufficient remaining disk space (331623694336 B)
[2025-04-19 12:12:20] 2025-04-19 10:12:02,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 12:12:20] 2025-04-19 10:12:02,554 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 12:12:20] 2025-04-19 10:12:02,555 | INFO     | update_server=False
[2025-04-19 12:12:20] 2025-04-19 10:12:02,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 12:12:20] 2025-04-19 10:12:02,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:12:20] 2025-04-19 10:12:02,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:12:20] 2025-04-19 10:12:02,555 | INFO     | aborting loop
[2025-04-19 12:12:20] 2025-04-19 10:12:02,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 12:12:20] 2025-04-19 10:12:02,555 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 12:12:20] 2025-04-19 10:12:02,555 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 12:12:20] 2025-04-19 10:12:02,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 12:12:20] 2025-04-19 10:12:02,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 12:12:20] 2025-04-19 10:12:02,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 12:12:20] 2025-04-19 10:12:02,930 | INFO     | all data control threads have been joined
[2025-04-19 12:12:20] 2025-04-19 10:12:03,037 | INFO     | all payload control threads have been joined
[2025-04-19 12:12:20] 2025-04-19 10:12:03,560 | INFO     | [job] queue monitor thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:03,561 | INFO     | [job] retrieve thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:03,561 | INFO     | [job] job monitor thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:03,936 | INFO     | [data] control thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:04,036 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:04,043 | INFO     | [payload] control thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:04,233 | INFO     | [job] validate thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:04,247 | INFO     | all job control threads have been joined
[2025-04-19 12:12:20] 2025-04-19 10:12:04,395 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:04,458 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:04,561 | INFO     | [data] copytool_out thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:04,579 | INFO     | [payload] validate_post thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:04,841 | INFO     | [data] copytool_in thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:05,158 | INFO     | [payload] failed_post thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:05,253 | INFO     | [job] control thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:06,562 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:13,376 | INFO     | job.realtimelogging is not enabled
[2025-04-19 12:12:20] 2025-04-19 10:12:14,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 12:12:20] 2025-04-19 10:12:15,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140261181650752)>', '<ExcThread(monitor, started 140259740350208)>']
[2025-04-19 12:12:20] 2025-04-19 10:12:16,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 12:12:20] 2025-04-19 10:12:16,630 | INFO     | [monitor] control thread has ended
[2025-04-19 12:12:20] 2025-04-19 10:12:20,730 | INFO     | all workflow threads have been joined
[2025-04-19 12:12:20] 2025-04-19 10:12:20,730 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 12:12:20] 2025-04-19 10:12:20,730 | INFO     | traces error code: 0
[2025-04-19 12:12:20] 2025-04-19 10:12:20,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 12:12:20] 2025-04-19 10:12:20,797 [wrapper] ==== pilot stdout END ====
[2025-04-19 12:12:20] 2025-04-19 10:12:20,801 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 12:12:20] 2025-04-19 10:12:20,805 [wrapper] pilotpid: 1569231
[2025-04-19 12:12:20] 2025-04-19 10:12:20,809 [wrapper] Pilot exit status: 0
[2025-04-19 12:12:20] 2025-04-19 10:12:20,821 [wrapper] pandaids: 6606629506
[2025-04-19 12:12:20] 2025-04-19 10:12:20,842 [wrapper] cleanup supervisor_pilot 1588678 1569232
[2025-04-19 12:12:20] 2025-04-19 10:12:20,846 [wrapper] Test setup, not cleaning
[2025-04-19 12:12:20] 2025-04-19 10:12:20,849 [wrapper] apfmon messages muted
[2025-04-19 12:12:20] 2025-04-19 10:12:20,853 [wrapper] ==== wrapper stdout END ====
[2025-04-19 12:12:20] 2025-04-19 10:12:20,856 [wrapper] ==== wrapper stderr END ====
[2025-04-19 12:12:20]  *** Error codes and diagnostics ***
[2025-04-19 12:12:20]     "exeErrorCode": 0,
[2025-04-19 12:12:20]     "exeErrorDiag": "",
[2025-04-19 12:12:20]     "pilotErrorCode": 0,
[2025-04-19 12:12:20]     "pilotErrorDiag": "",
[2025-04-19 12:12:20]  *** Listing of results directory ***
[2025-04-19 12:12:20] total 412772
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc    495897 Apr 18 17:27 pilot3.tar.gz
[2025-04-19 12:12:20] -rwx------ 1 boinc boinc     37140 Apr 18 17:35 runpilot2-wrapper.sh
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc      5111 Apr 18 17:35 queuedata.json
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc       100 Apr 19 10:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 12:12:20] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 10:55 run_atlas
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc       105 Apr 19 10:55 job.xml
[2025-04-19 12:12:20] -rw-r--r-- 2 boinc boinc 225220711 Apr 19 10:55 EVNT.44075481._002755.pool.root.1
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc      6855 Apr 19 10:55 init_data.xml
[2025-04-19 12:12:20] drwxrwx--x 2 boinc boinc      4096 Apr 19 10:55 shared
[2025-04-19 12:12:20] -rw-r--r-- 2 boinc boinc    508893 Apr 19 10:55 input.tar.gz
[2025-04-19 12:12:20] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:55 start_atlas.sh
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc         0 Apr 19 10:55 boinc_lockfile
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc      2579 Apr 19 10:55 pandaJob.out
[2025-04-19 12:12:20] -rw------- 1 boinc boinc       424 Apr 19 10:55 setup.sh.local
[2025-04-19 12:12:20] -rw------- 1 boinc boinc    991300 Apr 19 10:55 agis_schedconf.cvmfs.json
[2025-04-19 12:12:20] -rw------- 1 boinc boinc   1618536 Apr 19 10:55 agis_ddmendpoints.agis.ALL.json
[2025-04-19 12:12:20] drwx------ 4 boinc boinc      4096 Apr 19 10:55 pilot3
[2025-04-19 12:12:20] -rw------- 1 boinc boinc        95 Apr 19 12:11 pilot_heartbeat.json
[2025-04-19 12:12:20] -rw------- 1 boinc boinc 192190190 Apr 19 12:11 HITS.44075483._070943.pool.root.1
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc       529 Apr 19 12:11 boinc_task_state.xml
[2025-04-19 12:12:20] -rw------- 1 boinc boinc      1025 Apr 19 12:11 memory_monitor_summary.json
[2025-04-19 12:12:20] -rw------- 1 boinc boinc    252809 Apr 19 12:11 log.44075483._070943.job.log.tgz.1
[2025-04-19 12:12:20] -rw------- 1 boinc boinc      7670 Apr 19 12:12 heartbeat.json
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc      8192 Apr 19 12:12 boinc_mmap_file
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc        27 Apr 19 12:12 wrapper_checkpoint.txt
[2025-04-19 12:12:20] -rw------- 1 boinc boinc      4552 Apr 19 12:12 pilotlog.txt
[2025-04-19 12:12:20] -rw------- 1 boinc boinc    449534 Apr 19 12:12 log.44075483._070943.job.log.1
[2025-04-19 12:12:20] -rw------- 1 boinc boinc       357 Apr 19 12:12 output.list
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc       620 Apr 19 12:12 runtime_log
[2025-04-19 12:12:20] -rw------- 1 boinc boinc    716800 Apr 19 12:12 result.tar.gz
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc     11109 Apr 19 12:12 runtime_log.err
[2025-04-19 12:12:20] -rw------- 1 boinc boinc       660 Apr 19 12:12 q2VKDmrv2P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmFI5KDmFKEDRo.diag
[2025-04-19 12:12:20] -rw-r--r-- 1 boinc boinc     22213 Apr 19 12:12 stderr.txt
[2025-04-19 12:12:20] HITS file was successfully produced:
[2025-04-19 12:12:20] -rw------- 1 boinc boinc 192190190 Apr 19 12:11 shared/HITS.pool.root.1
[2025-04-19 12:12:20]  *** Contents of shared directory: ***
[2025-04-19 12:12:20] total 408860
[2025-04-19 12:12:20] -rw-r--r-- 2 boinc boinc 225220711 Apr 19 10:55 ATLAS.root_0
[2025-04-19 12:12:20] -rw-r--r-- 2 boinc boinc    508893 Apr 19 10:55 input.tar.gz
[2025-04-19 12:12:20] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:55 start_atlas.sh
[2025-04-19 12:12:20] -rw------- 1 boinc boinc 192190190 Apr 19 12:11 HITS.pool.root.1
[2025-04-19 12:12:20] -rw------- 1 boinc boinc    716800 Apr 19 12:12 result.tar.gz
12:12:22 (1565513): run_atlas exited; CPU time 15556.767666
12:12:22 (1565513): called boinc_finish(0)

</stderr_txt>
]]>

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