Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:53:10 (1206959): wrapper (7.7.26015): starting
10:53:10 (1206959): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 10:53:10] Arguments: --nthreads 3
[2025-04-19 10:53:10] Threads: 3
[2025-04-19 10:53:10] Checking for CVMFS
[2025-04-19 10:53:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 10:53:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 10:53:10] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 10:53:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 10:53:10] 2.9.2.0 2880 4253 80792 145031 3 56 25213063 36864000 0 130560 0 3135107 99.991 1017140 10123 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 10:53:10] CVMFS is ok
[2025-04-19 10:53:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 10:53:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 10:53:10] Further information can be found at the LHC@home message board.
[2025-04-19 10:53:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 10:53:10] Checking for apptainer binary...
[2025-04-19 10:53:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 10:53:10] Running /usr/bin/apptainer --version
[2025-04-19 10:53:10] apptainer version 1.3.6-6.1
[2025-04-19 10:53:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 10:53:10] magicA252
[2025-04-19 10:53:10] apptainer works
[2025-04-19 10:53:10] Set ATHENA_PROC_NUMBER=3
[2025-04-19 10:53:10] Set ATHENA_CORE_NUMBER=3
[2025-04-19 10:53:10] Starting ATLAS job with PandaID=6606629439
[2025-04-19 10:53:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 12:25:08]  *** The last 200 lines of the pilot log: ***
[2025-04-19 12:25:08]  filesize=226864
[2025-04-19 12:25:08]  filetype=log
[2025-04-19 12:25:08]  guid=660338a9-d363-4be8-a227-6e057b57328c
[2025-04-19 12:25:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 12:25:08]  is_altstaged=None
[2025-04-19 12:25:08]  is_tar=False
[2025-04-19 12:25:08]  lfn=log.44075483._070876.job.log.tgz.1
[2025-04-19 12:25:08]  mtime=0
[2025-04-19 12:25:08]  protocol_id=None
[2025-04-19 12:25:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 12:25:08]  replicas=None
[2025-04-19 12:25:08]  scope=mc23_13p6TeV
[2025-04-19 12:25:08]  status=None
[2025-04-19 12:25:08]  status_code=0
[2025-04-19 12:25:08]  storage_token=
[2025-04-19 12:25:08]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606629439/log.44075483._070876.job.log.tgz.1
[2025-04-19 12:25:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/26/log.44075483._070876.job.log.tgz.1
[2025-04-19 12:25:08]  workdir=None
[2025-04-19 12:25:08] ]
[2025-04-19 12:25:08] 2025-04-19 10:24:41,639 | INFO     | transferring file log.44075483._070876.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606629439/log.44075483._070876.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 12:25:08] 2025-04-19 10:24:41,639 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606629439/log.44075483._070876.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0708
[2025-04-19 12:25:08] 2025-04-19 10:24:41,653 | INFO     | adding to output.list: log.44075483._070876.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/26/log.44075483._070876.job.log.tg
[2025-04-19 12:25:08] 2025-04-19 10:24:41,653 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 12:25:08] 2025-04-19 10:24:41,653 | INFO     | summary of transferred files:
[2025-04-19 12:25:08] 2025-04-19 10:24:41,653 | INFO     |  -- lfn=log.44075483._070876.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 12:25:08] 2025-04-19 10:24:41,654 | INFO     | stage-out finished correctly
[2025-04-19 12:25:08] 2025-04-19 10:24:42,845 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 12:25:08] 2025-04-19 10:24:43,556 | INFO     | monitor loop #422: job 0:6606629439 is in state 'finished'
[2025-04-19 12:25:08] 2025-04-19 10:24:43,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 12:25:08] 2025-04-19 10:24:45,645 | INFO     | job 6606629439 has state=finished
[2025-04-19 12:25:08] 2025-04-19 10:24:45,645 | INFO     | preparing for final server update for job 6606629439 in state='finished'
[2025-04-19 12:25:08] 2025-04-19 10:24:45,646 | INFO     | this job has now completed (state=finished)
[2025-04-19 12:25:08] 2025-04-19 10:24:45,646 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 12:25:08] 2025-04-19 10:24:45,646 | INFO     | log transfer has been attempted: DONE
[2025-04-19 12:25:08] 2025-04-19 10:24:45,646 | INFO     | job 6606629439 has finished - writing final server update
[2025-04-19 12:25:08] 2025-04-19 10:24:45,646 | INFO     | total number of processed events: 400 (read)
[2025-04-19 12:25:08] 2025-04-19 10:24:45,648 | INFO     | executing command: lscpu
[2025-04-19 12:25:08] 2025-04-19 10:24:45,665 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 12:25:08] 2025-04-19 10:24:46,059 | INFO     | monitor loop #423: job 0:6606629439 is in state 'finished'
[2025-04-19 12:25:08] 2025-04-19 10:24:46,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 12:25:08] 2025-04-19 10:24:48,070 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 12:25:08] 2025-04-19 10:24:48,070 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606629439/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 12:25:08] 2025-04-19 10:24:48,071 | INFO     | extracted standard info from prmon json
[2025-04-19 12:25:08] 2025-04-19 10:24:48,071 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 12:25:08] 2025-04-19 10:24:48,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 12:25:08] 2025-04-19 10:24:48,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 12:25:08] 2025-04-19 10:24:48,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | fitting pss+swap vs Time
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | sum of square deviations: 177275882.0
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | sum of deviations: 5181552097.000002
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | mean x: 1745055622.0
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | mean y: 2342844.7590361447
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | -- intersect: -51003448329.67575
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | intersect: -51003448329.67575
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | chi2: 0.9322735697268083
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | -- intersect: -51003448329.67575
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | current memory leak: 29.23 B/s (using 83 data points, chi2=0.93)
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | ..............................
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | . Timing measurements:
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | . get job = 0 s
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | . initial setup = 1 s
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | . payload setup = 3 s
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | . stage-in = 0 s
[2025-04-19 12:25:08] 2025-04-19 10:24:48,072 | INFO     | . payload execution = 5465 s
[2025-04-19 12:25:08] 2025-04-19 10:24:48,073 | INFO     | . stage-out = 0 s
[2025-04-19 12:25:08] 2025-04-19 10:24:48,073 | INFO     | . log creation = 0 s
[2025-04-19 12:25:08] 2025-04-19 10:24:48,073 | INFO     | ..............................
[2025-04-19 12:25:08] 2025-04-19 10:24:48,399 | INFO     | 
[2025-04-19 12:25:08] 2025-04-19 10:24:48,399 | INFO     | job summary report
[2025-04-19 12:25:08] 2025-04-19 10:24:48,399 | INFO     | --------------------------------------------------
[2025-04-19 12:25:08] 2025-04-19 10:24:48,399 | INFO     | PanDA job id: 6606629439
[2025-04-19 12:25:08] 2025-04-19 10:24:48,399 | INFO     | task id: 44075483
[2025-04-19 12:25:08] 2025-04-19 10:24:48,399 | INFO     | errors: (none)
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | pilot state: finished 
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | transexitcode: 0
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | exeerrorcode: 0
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | exeerrordiag: 
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | exitcode: 0
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | exitmsg: OK
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | cpuconsumptiontime: 14395 s
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | nevents: 400
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | neventsw: 0
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | pid: 1217042
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | pgrp: 1217042
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | corecount: 3
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | event service: False
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | sizes: {0: 2425995, 1: 2426854, 3: 2427060, 11: 2427088, 5472: 2462611, 5473: 2462611, 5478: 2462909}
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | --------------------------------------------------
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | 
[2025-04-19 12:25:08] 2025-04-19 10:24:48,400 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 12:25:08] 2025-04-19 10:24:48,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | job 6606629439 has completed (purged errors)
[2025-04-19 12:25:08] 2025-04-19 10:24:48,418 | INFO     | overall cleanup function is called
[2025-04-19 12:25:08] 2025-04-19 10:24:49,424 | INFO     | --- collectZombieJob: --- 10, [1217042]
[2025-04-19 12:25:08] 2025-04-19 10:24:49,425 | INFO     | zombie collector waiting for pid 1217042
[2025-04-19 12:25:08] 2025-04-19 10:24:49,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 12:25:08] 2025-04-19 10:24:49,425 | INFO     | collected zombie processes
[2025-04-19 12:25:08] 2025-04-19 10:24:49,425 | INFO     | will attempt to kill all subprocesses of pid=1217042
[2025-04-19 12:25:08] 2025-04-19 10:24:49,466 | INFO     | process IDs to be killed: [1217042] (in reverse order)
[2025-04-19 12:25:08] 2025-04-19 10:24:49,490 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 12:25:08] 2025-04-19 10:24:49,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 12:25:08] 2025-04-19 10:24:49,491 | INFO     | did not find any defunct processes belonging to 1217042
[2025-04-19 12:25:08] 2025-04-19 10:24:49,492 | INFO     | did not find any defunct processes belonging to 1217042
[2025-04-19 12:25:08] 2025-04-19 10:24:49,493 | INFO     | ready for new job
[2025-04-19 12:25:08] 2025-04-19 10:24:49,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 12:25:08] 2025-04-19 10:24:49,493 | INFO     | **************************************
[2025-04-19 12:25:08] 2025-04-19 10:24:49,493 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 12:25:08] 2025-04-19 10:24:49,493 | INFO     | **************************************
[2025-04-19 12:25:08] 2025-04-19 10:24:49,493 | INFO     | 
[2025-04-19 12:25:08] 2025-04-19 10:24:49,494 | INFO     | architecture information:
[2025-04-19 12:25:08] 2025-04-19 10:24:49,494 | INFO     | executing command: cat /etc/os-release
[2025-04-19 12:25:08] 2025-04-19 10:24:49,503 | INFO     | cat /etc/os-release:
[2025-04-19 12:25:08] NAME="CentOS Linux"
[2025-04-19 12:25:08] VERSION="7 (Core)"
[2025-04-19 12:25:08] ID="centos"
[2025-04-19 12:25:08] ID_LIKE="rhel fedora"
[2025-04-19 12:25:08] VERSION_ID="7"
[2025-04-19 12:25:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 12:25:08] ANSI_COLOR="0;31"
[2025-04-19 12:25:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 12:25:08] HOME_URL="https://www.centos.org/"
[2025-04-19 12:25:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 12:25:08] 
[2025-04-19 12:25:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 12:25:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 12:25:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 12:25:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 12:25:08] 
[2025-04-19 12:25:08] 2025-04-19 10:24:49,503 | INFO     | **************************************
[2025-04-19 12:25:08] 2025-04-19 10:24:50,003 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 12:25:08] 2025-04-19 10:24:50,015 | INFO     | sufficient remaining disk space (374961340416 B)
[2025-04-19 12:25:08] 2025-04-19 10:24:50,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 12:25:08] 2025-04-19 10:24:50,015 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 12:25:08] 2025-04-19 10:24:50,015 | INFO     | update_server=False
[2025-04-19 12:25:08] 2025-04-19 10:24:50,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 12:25:08] 2025-04-19 10:24:50,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:25:08] 2025-04-19 10:24:50,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:25:08] 2025-04-19 10:24:50,016 | INFO     | aborting loop
[2025-04-19 12:25:08] 2025-04-19 10:24:50,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 12:25:08] 2025-04-19 10:24:50,790 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 12:25:08] 2025-04-19 10:24:50,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 12:25:08] 2025-04-19 10:24:50,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 12:25:08] 2025-04-19 10:24:51,021 | INFO     | [job] queue monitor thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:51,021 | INFO     | [job] retrieve thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:51,022 | INFO     | [job] job monitor thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:51,058 | INFO     | all job control threads have been joined
[2025-04-19 12:25:08] 2025-04-19 10:24:51,058 | INFO     | all data control threads have been joined
[2025-04-19 12:25:08] 2025-04-19 10:24:51,259 | INFO     | all payload control threads have been joined
[2025-04-19 12:25:08] 2025-04-19 10:24:51,352 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:51,988 | INFO     | [payload] validate_post thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:52,021 | INFO     | [data] copytool_out thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:52,037 | INFO     | [data] copytool_in thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:52,062 | INFO     | [data] control thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:52,062 | INFO     | [job] control thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:52,265 | INFO     | [payload] control thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:52,427 | INFO     | [payload] failed_post thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:52,436 | INFO     | [job] validate thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:52,505 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:52,509 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:24:53,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 12:25:08] 2025-04-19 10:24:57,395 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:25:00,019 | INFO     | job.realtimelogging is not enabled
[2025-04-19 12:25:08] 2025-04-19 10:25:01,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 12:25:08] 2025-04-19 10:25:03,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180764886848)>', '<ExcThread(monitor, started 140179587188480)>']
[2025-04-19 12:25:08] 2025-04-19 10:25:03,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 12:25:08] 2025-04-19 10:25:03,858 | INFO     | [monitor] control thread has ended
[2025-04-19 12:25:08] 2025-04-19 10:25:08,030 | INFO     | all workflow threads have been joined
[2025-04-19 12:25:08] 2025-04-19 10:25:08,030 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 12:25:08] 2025-04-19 10:25:08,031 | INFO     | traces error code: 0
[2025-04-19 12:25:08] 2025-04-19 10:25:08,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 12:25:08] 2025-04-19 10:25:08,082 [wrapper] ==== pilot stdout END ====
[2025-04-19 12:25:08] 2025-04-19 10:25:08,085 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 12:25:08] 2025-04-19 10:25:08,087 [wrapper] pilotpid: 1210609
[2025-04-19 12:25:08] 2025-04-19 10:25:08,090 [wrapper] Pilot exit status: 0
[2025-04-19 12:25:08] 2025-04-19 10:25:08,097 [wrapper] pandaids: 6606629439
[2025-04-19 12:25:08] 2025-04-19 10:25:08,114 [wrapper] cleanup supervisor_pilot 1229243 1210610
[2025-04-19 12:25:08] 2025-04-19 10:25:08,117 [wrapper] Test setup, not cleaning
[2025-04-19 12:25:08] 2025-04-19 10:25:08,119 [wrapper] apfmon messages muted
[2025-04-19 12:25:08] 2025-04-19 10:25:08,122 [wrapper] ==== wrapper stdout END ====
[2025-04-19 12:25:08] 2025-04-19 10:25:08,124 [wrapper] ==== wrapper stderr END ====
[2025-04-19 12:25:08]  *** Error codes and diagnostics ***
[2025-04-19 12:25:08]     "exeErrorCode": 0,
[2025-04-19 12:25:08]     "exeErrorDiag": "",
[2025-04-19 12:25:08]     "pilotErrorCode": 0,
[2025-04-19 12:25:08]     "pilotErrorDiag": "",
[2025-04-19 12:25:08]  *** Listing of results directory ***
[2025-04-19 12:25:08] total 419148
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc    495897 Apr 18 17:21 pilot3.tar.gz
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc      5111 Apr 18 17:25 queuedata.json
[2025-04-19 12:25:08] -rwx------ 1 boinc boinc     37140 Apr 18 17:26 runpilot2-wrapper.sh
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc       100 Apr 19 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 12:25:08] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 10:53 run_atlas
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc       105 Apr 19 10:53 job.xml
[2025-04-19 12:25:08] -rw-r--r-- 2 boinc boinc 225163380 Apr 19 10:53 EVNT.44075481._002753.pool.root.1
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc      6931 Apr 19 10:53 init_data.xml
[2025-04-19 12:25:08] drwxrwx--x 2 boinc boinc      4096 Apr 19 10:53 shared
[2025-04-19 12:25:08] -rw-r--r-- 2 boinc boinc    508893 Apr 19 10:53 input.tar.gz
[2025-04-19 12:25:08] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:53 start_atlas.sh
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc         0 Apr 19 10:53 boinc_lockfile
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc      2578 Apr 19 10:53 pandaJob.out
[2025-04-19 12:25:08] -rw------- 1 boinc boinc       424 Apr 19 10:53 setup.sh.local
[2025-04-19 12:25:08] -rw------- 1 boinc boinc    991300 Apr 19 10:53 agis_schedconf.cvmfs.json
[2025-04-19 12:25:08] -rw------- 1 boinc boinc   1618536 Apr 19 10:53 agis_ddmendpoints.agis.ALL.json
[2025-04-19 12:25:08] drwx------ 4 boinc boinc      4096 Apr 19 10:53 pilot3
[2025-04-19 12:25:08] -rw------- 1 boinc boinc 198656804 Apr 19 12:24 HITS.44075483._070876.pool.root.1
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc       529 Apr 19 12:24 boinc_task_state.xml
[2025-04-19 12:25:08] -rw------- 1 boinc boinc      1020 Apr 19 12:24 memory_monitor_summary.json
[2025-04-19 12:25:08] -rw------- 1 boinc boinc    226864 Apr 19 12:24 log.44075483._070876.job.log.tgz.1
[2025-04-19 12:25:08] -rw------- 1 boinc boinc        95 Apr 19 12:24 pilot_heartbeat.json
[2025-04-19 12:25:08] -rw------- 1 boinc boinc      7658 Apr 19 12:24 heartbeat.json
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc        27 Apr 19 12:25 wrapper_checkpoint.txt
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc      8192 Apr 19 12:25 boinc_mmap_file
[2025-04-19 12:25:08] -rw------- 1 boinc boinc      4429 Apr 19 12:25 pilotlog.txt
[2025-04-19 12:25:08] -rw------- 1 boinc boinc    529818 Apr 19 12:25 log.44075483._070876.job.log.1
[2025-04-19 12:25:08] -rw------- 1 boinc boinc       357 Apr 19 12:25 output.list
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc       620 Apr 19 12:25 runtime_log
[2025-04-19 12:25:08] -rw------- 1 boinc boinc    778240 Apr 19 12:25 result.tar.gz
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc     11114 Apr 19 12:25 runtime_log.err
[2025-04-19 12:25:08] -rw------- 1 boinc boinc       661 Apr 19 12:25 XreNDmdm2P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmlH5KDmSZFJFn.diag
[2025-04-19 12:25:08] -rw-r--r-- 1 boinc boinc     21083 Apr 19 12:25 stderr.txt
[2025-04-19 12:25:08] HITS file was successfully produced:
[2025-04-19 12:25:08] -rw------- 1 boinc boinc 198656804 Apr 19 12:24 shared/HITS.pool.root.1
[2025-04-19 12:25:08]  *** Contents of shared directory: ***
[2025-04-19 12:25:08] total 415180
[2025-04-19 12:25:08] -rw-r--r-- 2 boinc boinc 225163380 Apr 19 10:53 ATLAS.root_0
[2025-04-19 12:25:08] -rw-r--r-- 2 boinc boinc    508893 Apr 19 10:53 input.tar.gz
[2025-04-19 12:25:08] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:53 start_atlas.sh
[2025-04-19 12:25:08] -rw------- 1 boinc boinc 198656804 Apr 19 12:24 HITS.pool.root.1
[2025-04-19 12:25:08] -rw------- 1 boinc boinc    778240 Apr 19 12:25 result.tar.gz
12:25:10 (1206959): run_atlas exited; CPU time 14406.910873
12:25:10 (1206959): called boinc_finish(0)

</stderr_txt>
]]>

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