Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:28:56 (28073): wrapper (7.7.26015): starting
18:28:56 (28073): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 18:28:56] Arguments: --nthreads 12
[2025-04-18 18:28:56] Threads: 12
[2025-04-18 18:28:56] Checking for CVMFS
[2025-04-18 18:28:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 18:28:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 18:28:56] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 18:28:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 18:28:56] 2.11.2.0 10568 276446 164176 145018 1 57 18986832 20275200 1 130560 0 23255782 99.990 7150260 51218 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 18:28:56] CVMFS is ok
[2025-04-18 18:28:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 18:28:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 18:28:56] Further information can be found at the LHC@home message board.
[2025-04-18 18:28:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 18:28:56] Checking for apptainer binary...
[2025-04-18 18:28:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 18:28:56] Running /usr/bin/apptainer --version
[2025-04-18 18:28:56] apptainer version 1.3.2-1.el7
[2025-04-18 18:28:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 18:28:57] c-205-24.aglt2.org
[2025-04-18 18:28:57] apptainer works
[2025-04-18 18:28:57] Set ATHENA_PROC_NUMBER=12
[2025-04-18 18:28:57] Set ATHENA_CORE_NUMBER=12
[2025-04-18 18:28:57] Starting ATLAS job with PandaID=6606784043
[2025-04-18 18:28:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 19:57:35]  *** The last 200 lines of the pilot log: ***
[2025-04-18 19:57:35]  guid=e018ed0e-2391-436c-bc4c-4a91101bac76
[2025-04-18 19:57:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 19:57:35]  is_altstaged=None
[2025-04-18 19:57:35]  is_tar=False
[2025-04-18 19:57:35]  lfn=log.44075483._073257.job.log.tgz.1
[2025-04-18 19:57:35]  mtime=0
[2025-04-18 19:57:35]  protocol_id=None
[2025-04-18 19:57:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 19:57:35]  replicas=None
[2025-04-18 19:57:35]  scope=mc23_13p6TeV
[2025-04-18 19:57:35]  status=None
[2025-04-18 19:57:35]  status_code=0
[2025-04-18 19:57:35]  storage_token=
[2025-04-18 19:57:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606784043/log.44075483._073257.job.log.tgz.1
[2025-04-18 19:57:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/55/log.44075483._073257.job.log.tgz.1
[2025-04-18 19:57:35]  workdir=None
[2025-04-18 19:57:35] ]
[2025-04-18 19:57:35] 2025-04-18 23:57:05,772 | INFO     | transferring file log.44075483._073257.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606784043/log.44075483._073257.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 19:57:35] 2025-04-18 23:57:05,773 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606784043/log.44075483._073257.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._073257.job
[2025-04-18 19:57:35] 2025-04-18 23:57:05,794 | INFO     | adding to output.list: log.44075483._073257.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/55/log.44075483._073257.job.log.tg
[2025-04-18 19:57:35] 2025-04-18 23:57:05,794 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 19:57:35] 2025-04-18 23:57:05,795 | INFO     | summary of transferred files:
[2025-04-18 19:57:35] 2025-04-18 23:57:05,795 | INFO     |  -- lfn=log.44075483._073257.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 19:57:35] 2025-04-18 23:57:05,795 | INFO     | stage-out finished correctly
[2025-04-18 19:57:35] 2025-04-18 23:57:08,623 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 19:57:35] 2025-04-18 23:57:09,680 | INFO     | PID=31827 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 19:57:35] 2025-04-18 23:57:10,906 | INFO     | job 6606784043 has state=finished
[2025-04-18 19:57:35] 2025-04-18 23:57:10,907 | INFO     | preparing for final server update for job 6606784043 in state='finished'
[2025-04-18 19:57:35] 2025-04-18 23:57:10,907 | INFO     | this job has now completed (state=finished)
[2025-04-18 19:57:35] 2025-04-18 23:57:10,907 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 19:57:35] 2025-04-18 23:57:10,908 | INFO     | log transfer has been attempted: DONE
[2025-04-18 19:57:35] 2025-04-18 23:57:10,908 | INFO     | job 6606784043 has finished - writing final server update
[2025-04-18 19:57:35] 2025-04-18 23:57:10,908 | INFO     | total number of processed events: 400 (read)
[2025-04-18 19:57:35] 2025-04-18 23:57:10,910 | INFO     | executing command: lscpu
[2025-04-18 19:57:35] 2025-04-18 23:57:10,941 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 19:57:35] 2025-04-18 23:57:14,324 | WARNING  | process 5885 can no longer be monitored (due to stat problems) - aborting
[2025-04-18 19:57:35] 2025-04-18 23:57:14,324 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606784043/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 19:57:35] 2025-04-18 23:57:14,413 | INFO     | number of running child processes to parent process 5885: 1
[2025-04-18 19:57:35] 2025-04-18 23:57:14,413 | INFO     | maximum number of monitored processes: 6
[2025-04-18 19:57:35] 2025-04-18 23:57:15,893 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 19:57:35] 2025-04-18 23:57:15,893 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606784043/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 19:57:35] 2025-04-18 23:57:15,894 | INFO     | extracted standard info from prmon json
[2025-04-18 19:57:35] 2025-04-18 23:57:15,894 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 19:57:35] 2025-04-18 23:57:15,895 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 19:57:35] 2025-04-18 23:57:15,895 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 19:57:35] 2025-04-18 23:57:15,895 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 19:57:35] 2025-04-18 23:57:15,898 | INFO     | fitting pss+swap vs Time
[2025-04-18 19:57:35] 2025-04-18 23:57:15,898 | INFO     | sum of square deviations: 152858680.0
[2025-04-18 19:57:35] 2025-04-18 23:57:15,899 | INFO     | sum of deviations: 19454518086.000004
[2025-04-18 19:57:35] 2025-04-18 23:57:15,899 | INFO     | mean x: 1745018064.0
[2025-04-18 19:57:35] 2025-04-18 23:57:15,899 | INFO     | mean y: 2642195.911392405
[2025-04-18 19:57:35] 2025-04-18 23:57:15,899 | INFO     | -- intersect: -222088020149.75787
[2025-04-18 19:57:35] 2025-04-18 23:57:15,900 | INFO     | intersect: -222088020149.75787
[2025-04-18 19:57:35] 2025-04-18 23:57:15,900 | INFO     | chi2: 2.405234236885689
[2025-04-18 19:57:35] 2025-04-18 23:57:15,900 | INFO     | -- intersect: -222088020149.75787
[2025-04-18 19:57:35] 2025-04-18 23:57:15,900 | INFO     | current memory leak: 127.27 B/s (using 79 data points, chi2=2.41)
[2025-04-18 19:57:35] 2025-04-18 23:57:15,901 | INFO     | ..............................
[2025-04-18 19:57:35] 2025-04-18 23:57:15,901 | INFO     | . Timing measurements:
[2025-04-18 19:57:35] 2025-04-18 23:57:15,901 | INFO     | . get job = 0 s
[2025-04-18 19:57:35] 2025-04-18 23:57:15,901 | INFO     | . initial setup = 2 s
[2025-04-18 19:57:35] 2025-04-18 23:57:15,901 | INFO     | . payload setup = 7 s
[2025-04-18 19:57:35] 2025-04-18 23:57:15,901 | INFO     | . stage-in = 0 s
[2025-04-18 19:57:35] 2025-04-18 23:57:15,901 | INFO     | . payload execution = 5249 s
[2025-04-18 19:57:35] 2025-04-18 23:57:15,902 | INFO     | . stage-out = 0 s
[2025-04-18 19:57:35] 2025-04-18 23:57:15,902 | INFO     | . log creation = 0 s
[2025-04-18 19:57:35] 2025-04-18 23:57:15,902 | INFO     | ..............................
[2025-04-18 19:57:35] 2025-04-18 23:57:15,988 | INFO     | 
[2025-04-18 19:57:35] 2025-04-18 23:57:15,988 | INFO     | job summary report
[2025-04-18 19:57:35] 2025-04-18 23:57:15,991 | INFO     | --------------------------------------------------
[2025-04-18 19:57:35] 2025-04-18 23:57:15,991 | INFO     | PanDA job id: 6606784043
[2025-04-18 19:57:35] 2025-04-18 23:57:15,992 | INFO     | task id: 44075483
[2025-04-18 19:57:35] 2025-04-18 23:57:15,992 | INFO     | errors: (none)
[2025-04-18 19:57:35] 2025-04-18 23:57:15,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 19:57:35] 2025-04-18 23:57:15,992 | INFO     | pilot state: finished 
[2025-04-18 19:57:35] 2025-04-18 23:57:15,992 | INFO     | transexitcode: 0
[2025-04-18 19:57:35] 2025-04-18 23:57:15,992 | INFO     | exeerrorcode: 0
[2025-04-18 19:57:35] 2025-04-18 23:57:15,992 | INFO     | exeerrordiag: 
[2025-04-18 19:57:35] 2025-04-18 23:57:15,993 | INFO     | exitcode: 0
[2025-04-18 19:57:35] 2025-04-18 23:57:15,993 | INFO     | exitmsg: OK
[2025-04-18 19:57:35] 2025-04-18 23:57:15,993 | INFO     | cpuconsumptiontime: 49354 s
[2025-04-18 19:57:35] 2025-04-18 23:57:15,993 | INFO     | nevents: 400
[2025-04-18 19:57:35] 2025-04-18 23:57:15,993 | INFO     | neventsw: 0
[2025-04-18 19:57:35] 2025-04-18 23:57:15,993 | INFO     | pid: 5885
[2025-04-18 19:57:35] 2025-04-18 23:57:15,993 | INFO     | pgrp: 5885
[2025-04-18 19:57:35] 2025-04-18 23:57:15,993 | INFO     | corecount: 12
[2025-04-18 19:57:35] 2025-04-18 23:57:15,994 | INFO     | event service: False
[2025-04-18 19:57:35] 2025-04-18 23:57:15,994 | INFO     | sizes: {0: 2426597, 1: 2426852, 6: 2427058, 12: 2427086, 5258: 2453414, 5259: 2462355, 5262: 2462539, 5269: 2462709}
[2025-04-18 19:57:35] 2025-04-18 23:57:15,994 | INFO     | --------------------------------------------------
[2025-04-18 19:57:35] 2025-04-18 23:57:15,994 | INFO     | 
[2025-04-18 19:57:35] 2025-04-18 23:57:15,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 19:57:35] 2025-04-18 23:57:16,047 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,048 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 19:57:35] 2025-04-18 23:57:16,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,050 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 19:57:35] 2025-04-18 23:57:16,050 | INFO     | job 6606784043 has completed (purged errors)
[2025-04-18 19:57:35] 2025-04-18 23:57:16,051 | INFO     | overall cleanup function is called
[2025-04-18 19:57:35] 2025-04-18 23:57:17,058 | INFO     | --- collectZombieJob: --- 10, [5885]
[2025-04-18 19:57:35] 2025-04-18 23:57:17,058 | INFO     | zombie collector waiting for pid 5885
[2025-04-18 19:57:35] 2025-04-18 23:57:17,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 19:57:35] 2025-04-18 23:57:17,059 | INFO     | collected zombie processes
[2025-04-18 19:57:35] 2025-04-18 23:57:17,059 | INFO     | will attempt to kill all subprocesses of pid=5885
[2025-04-18 19:57:35] 2025-04-18 23:57:17,149 | INFO     | process IDs to be killed: [5885] (in reverse order)
[2025-04-18 19:57:35] 2025-04-18 23:57:17,194 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 19:57:35] 2025-04-18 23:57:17,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 19:57:35] 2025-04-18 23:57:17,198 | INFO     | did not find any defunct processes belonging to 5885
[2025-04-18 19:57:35] 2025-04-18 23:57:17,201 | INFO     | did not find any defunct processes belonging to 5885
[2025-04-18 19:57:35] 2025-04-18 23:57:17,201 | INFO     | ready for new job
[2025-04-18 19:57:35] 2025-04-18 23:57:17,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 19:57:35] 2025-04-18 23:57:17,202 | INFO     | **************************************
[2025-04-18 19:57:35] 2025-04-18 23:57:17,203 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 19:57:35] 2025-04-18 23:57:17,203 | INFO     | **************************************
[2025-04-18 19:57:35] 2025-04-18 23:57:17,203 | INFO     | 
[2025-04-18 19:57:35] 2025-04-18 23:57:17,203 | INFO     | architecture information:
[2025-04-18 19:57:35] 2025-04-18 23:57:17,204 | INFO     | executing command: cat /etc/os-release
[2025-04-18 19:57:35] 2025-04-18 23:57:17,218 | INFO     | cat /etc/os-release:
[2025-04-18 19:57:35] NAME="CentOS Linux"
[2025-04-18 19:57:35] VERSION="7 (Core)"
[2025-04-18 19:57:35] ID="centos"
[2025-04-18 19:57:35] ID_LIKE="rhel fedora"
[2025-04-18 19:57:35] VERSION_ID="7"
[2025-04-18 19:57:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 19:57:35] ANSI_COLOR="0;31"
[2025-04-18 19:57:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 19:57:35] HOME_URL="https://www.centos.org/"
[2025-04-18 19:57:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 19:57:35] 
[2025-04-18 19:57:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 19:57:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 19:57:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 19:57:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 19:57:35] 
[2025-04-18 19:57:35] 2025-04-18 23:57:17,218 | INFO     | **************************************
[2025-04-18 19:57:35] 2025-04-18 23:57:17,721 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 19:57:35] 2025-04-18 23:57:17,738 | INFO     | sufficient remaining disk space (29384245248 B)
[2025-04-18 19:57:35] 2025-04-18 23:57:17,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 19:57:35] 2025-04-18 23:57:17,738 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 19:57:35] 2025-04-18 23:57:17,738 | INFO     | update_server=False
[2025-04-18 19:57:35] 2025-04-18 23:57:17,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 19:57:35] 2025-04-18 23:57:17,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:57:35] 2025-04-18 23:57:17,739 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 19:57:35] 2025-04-18 23:57:17,740 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 19:57:35] 2025-04-18 23:57:17,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 19:57:35] 2025-04-18 23:57:17,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 19:57:35] 2025-04-18 23:57:17,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:57:35] 2025-04-18 23:57:17,917 | INFO     | aborting loop
[2025-04-18 19:57:35] 2025-04-18 23:57:17,918 | INFO     | all payload control threads have been joined
[2025-04-18 19:57:35] 2025-04-18 23:57:17,960 | INFO     | all data control threads have been joined
[2025-04-18 19:57:35] 2025-04-18 23:57:18,484 | INFO     | all job control threads have been joined
[2025-04-18 19:57:35] 2025-04-18 23:57:18,744 | INFO     | [job] retrieve thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:18,745 | INFO     | [job] queue monitor thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:18,841 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:18,856 | INFO     | [job] validate thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:18,866 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:18,905 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 19:57:35] 2025-04-18 23:57:18,922 | INFO     | [job] job monitor thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:18,923 | INFO     | [payload] control thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:18,965 | INFO     | [data] control thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:19,195 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:19,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 19:57:35] 2025-04-18 23:57:19,485 | INFO     | [data] copytool_in thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:19,489 | INFO     | [job] control thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:19,611 | INFO     | [payload] failed_post thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:20,185 | INFO     | [payload] validate_post thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:20,910 | INFO     | [data] copytool_out thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:23,222 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:28,521 | INFO     | job.realtimelogging is not enabled
[2025-04-18 19:57:35] 2025-04-18 23:57:29,526 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 19:57:35] 2025-04-18 23:57:30,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140368008918848)>', '<ExcThread(monitor, started 140366955136768)>']
[2025-04-18 19:57:35] 2025-04-18 23:57:30,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 19:57:35] 2025-04-18 23:57:30,805 | INFO     | [monitor] control thread has ended
[2025-04-18 19:57:35] 2025-04-18 23:57:35,279 | INFO     | all workflow threads have been joined
[2025-04-18 19:57:35] 2025-04-18 23:57:35,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 19:57:35] 2025-04-18 23:57:35,280 | INFO     | traces error code: 0
[2025-04-18 19:57:35] 2025-04-18 23:57:35,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 19:57:35] 2025-04-18 23:57:35,370 [wrapper] ==== pilot stdout END ====
[2025-04-18 19:57:35] 2025-04-18 23:57:35,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 19:57:35] 2025-04-18 23:57:35,378 [wrapper] pilotpid: 31827
[2025-04-18 19:57:35] 2025-04-18 23:57:35,382 [wrapper] Pilot exit status: 0
[2025-04-18 19:57:35] 2025-04-18 23:57:35,397 [wrapper] pandaids: 6606784043
[2025-04-18 19:57:35] 2025-04-18 23:57:35,436 [wrapper] cleanup supervisor_pilot 17369 31828
[2025-04-18 19:57:35] 2025-04-18 23:57:35,440 [wrapper] Test setup, not cleaning
[2025-04-18 19:57:35] 2025-04-18 23:57:35,444 [wrapper] apfmon messages muted
[2025-04-18 19:57:35] 2025-04-18 23:57:35,448 [wrapper] ==== wrapper stdout END ====
[2025-04-18 19:57:35] 2025-04-18 23:57:35,452 [wrapper] ==== wrapper stderr END ====
[2025-04-18 19:57:35]  *** Error codes and diagnostics ***
[2025-04-18 19:57:35]     "exeErrorCode": 0,
[2025-04-18 19:57:35]     "exeErrorDiag": "",
[2025-04-18 19:57:35]     "pilotErrorCode": 0,
[2025-04-18 19:57:35]     "pilotErrorDiag": "",
[2025-04-18 19:57:35]  *** Listing of results directory ***
[2025-04-18 19:57:35] total 423208
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 15:19 pilot3.tar.gz
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 15:22 queuedata.json
[2025-04-18 19:57:35] -rwx------ 1 boincer umatlas     37140 Apr 18 15:23 runpilot2-wrapper.sh
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas       100 Apr 18 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 19:57:35] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 18:28 run_atlas
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas       105 Apr 18 18:28 job.xml
[2025-04-18 19:57:35] -rw-r--r-- 2 boincer umatlas 226310178 Apr 18 18:28 EVNT.44075481._002845.pool.root.1
[2025-04-18 19:57:35] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:28 start_atlas.sh
[2025-04-18 19:57:35] drwxrwx--x 2 boincer umatlas      4096 Apr 18 18:28 shared
[2025-04-18 19:57:35] -rw-r--r-- 2 boincer umatlas    508895 Apr 18 18:28 input.tar.gz
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas         0 Apr 18 18:28 boinc_lockfile
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas      2579 Apr 18 18:28 pandaJob.out
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas       424 Apr 18 18:28 setup.sh.local
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas    991300 Apr 18 18:29 agis_schedconf.cvmfs.json
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas   1618536 Apr 18 18:29 agis_ddmendpoints.agis.ALL.json
[2025-04-18 19:57:35] drwx------ 4 boincer umatlas      4096 Apr 18 18:29 pilot3
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 19:55 init_data.xml
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas 201448752 Apr 18 19:56 HITS.44075483._073257.pool.root.1
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas       529 Apr 18 19:56 boinc_task_state.xml
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas      1048 Apr 18 19:57 memory_monitor_summary.json
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas    376053 Apr 18 19:57 log.44075483._073257.job.log.tgz.1
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas        95 Apr 18 19:57 pilot_heartbeat.json
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas      7754 Apr 18 19:57 heartbeat.json
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas        27 Apr 18 19:57 wrapper_checkpoint.txt
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 19:57 boinc_mmap_file
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas      4548 Apr 18 19:57 pilotlog.txt
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas    498375 Apr 18 19:57 log.44075483._073257.job.log.1
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas       357 Apr 18 19:57 output.list
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas       620 Apr 18 19:57 runtime_log
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas    890880 Apr 18 19:57 result.tar.gz
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas       658 Apr 18 19:57 YGpMDmGU6P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmZV5KDmnWlHKo.diag
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 19:57 runtime_log.err
[2025-04-18 19:57:35] -rw-r--r-- 1 boincer umatlas     21375 Apr 18 19:57 stderr.txt
[2025-04-18 19:57:35] HITS file was successfully produced:
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas 201448752 Apr 18 19:56 shared/HITS.pool.root.1
[2025-04-18 19:57:35]  *** Contents of shared directory: ***
[2025-04-18 19:57:35] total 419128
[2025-04-18 19:57:35] -rw-r--r-- 2 boincer umatlas 226310178 Apr 18 18:28 ATLAS.root_0
[2025-04-18 19:57:35] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:28 start_atlas.sh
[2025-04-18 19:57:35] -rw-r--r-- 2 boincer umatlas    508895 Apr 18 18:28 input.tar.gz
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas 201448752 Apr 18 19:56 HITS.pool.root.1
[2025-04-18 19:57:35] -rw------- 1 boincer umatlas    890880 Apr 18 19:57 result.tar.gz
19:57:37 (28073): run_atlas exited; CPU time 49274.629969
19:57:37 (28073): called boinc_finish(0)

</stderr_txt>
]]>

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