Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:11:47 (4223): wrapper (7.7.26015): starting
18:11:47 (4223): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 18:11:47] Arguments: --nthreads 12
[2025-04-18 18:11:47] Threads: 12
[2025-04-18 18:11:47] Checking for CVMFS
[2025-04-18 18:11:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 18:11:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 18:11:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 18:11:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 18:11:48] 2.11.2.0 5876 87031 150268 145017 2 55 19034644 20275201 1 130560 0 23051710 99.970 7396644 52249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 18:11:48] CVMFS is ok
[2025-04-18 18:11:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 18:11:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 18:11:48] Further information can be found at the LHC@home message board.
[2025-04-18 18:11:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 18:11:48] Checking for apptainer binary...
[2025-04-18 18:11:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 18:11:48] Running /usr/bin/apptainer --version
[2025-04-18 18:11:48] apptainer version 1.3.2-1.el7
[2025-04-18 18:11:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 18:11:49] c-205-31.aglt2.org
[2025-04-18 18:11:49] apptainer works
[2025-04-18 18:11:49] Set ATHENA_PROC_NUMBER=12
[2025-04-18 18:11:49] Set ATHENA_CORE_NUMBER=12
[2025-04-18 18:11:49] Starting ATLAS job with PandaID=6606784030
[2025-04-18 18:11:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 19:36:56]  *** The last 200 lines of the pilot log: ***
[2025-04-18 19:36:56]  guid=c79f91f0-954b-4042-ad59-9022413359ee
[2025-04-18 19:36:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 19:36:56]  is_altstaged=None
[2025-04-18 19:36:56]  is_tar=False
[2025-04-18 19:36:56]  lfn=log.44075483._073244.job.log.tgz.1
[2025-04-18 19:36:56]  mtime=0
[2025-04-18 19:36:56]  protocol_id=None
[2025-04-18 19:36:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 19:36:56]  replicas=None
[2025-04-18 19:36:56]  scope=mc23_13p6TeV
[2025-04-18 19:36:56]  status=None
[2025-04-18 19:36:56]  status_code=0
[2025-04-18 19:36:56]  storage_token=
[2025-04-18 19:36:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606784030/log.44075483._073244.job.log.tgz.1
[2025-04-18 19:36:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/2b/log.44075483._073244.job.log.tgz.1
[2025-04-18 19:36:56]  workdir=None
[2025-04-18 19:36:56] ]
[2025-04-18 19:36:56] 2025-04-18 23:36:28,466 | INFO     | transferring file log.44075483._073244.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606784030/log.44075483._073244.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 19:36:56] 2025-04-18 23:36:28,467 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606784030/log.44075483._073244.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._073244.job
[2025-04-18 19:36:56] 2025-04-18 23:36:28,490 | INFO     | adding to output.list: log.44075483._073244.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/2b/log.44075483._073244.job.log.tg
[2025-04-18 19:36:56] 2025-04-18 23:36:28,491 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 19:36:56] 2025-04-18 23:36:28,491 | INFO     | summary of transferred files:
[2025-04-18 19:36:56] 2025-04-18 23:36:28,491 | INFO     |  -- lfn=log.44075483._073244.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 19:36:56] 2025-04-18 23:36:28,491 | INFO     | stage-out finished correctly
[2025-04-18 19:36:56] 2025-04-18 23:36:29,839 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 19:36:56] 2025-04-18 23:36:29,947 | INFO     | monitor loop #379: job 0:6606784030 is in state 'finished'
[2025-04-18 19:36:56] 2025-04-18 23:36:29,947 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 19:36:56] 2025-04-18 23:36:31,322 | INFO     | job 6606784030 has state=finished
[2025-04-18 19:36:56] 2025-04-18 23:36:31,322 | INFO     | preparing for final server update for job 6606784030 in state='finished'
[2025-04-18 19:36:56] 2025-04-18 23:36:31,323 | INFO     | this job has now completed (state=finished)
[2025-04-18 19:36:56] 2025-04-18 23:36:31,323 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 19:36:56] 2025-04-18 23:36:31,323 | INFO     | log transfer has been attempted: DONE
[2025-04-18 19:36:56] 2025-04-18 23:36:31,323 | INFO     | job 6606784030 has finished - writing final server update
[2025-04-18 19:36:56] 2025-04-18 23:36:31,324 | INFO     | total number of processed events: 400 (read)
[2025-04-18 19:36:56] 2025-04-18 23:36:31,325 | INFO     | executing command: lscpu
[2025-04-18 19:36:56] 2025-04-18 23:36:31,354 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 19:36:56] 2025-04-18 23:36:32,450 | INFO     | monitor loop #380: job 0:6606784030 is in state 'finished'
[2025-04-18 19:36:56] 2025-04-18 23:36:32,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 19:36:56] 2025-04-18 23:36:34,962 | INFO     | monitor loop #381: job 0:6606784030 is in state 'finished'
[2025-04-18 19:36:56] 2025-04-18 23:36:34,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 19:36:56] 2025-04-18 23:36:36,188 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 19:36:56] 2025-04-18 23:36:36,188 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606784030/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 19:36:56] 2025-04-18 23:36:36,189 | INFO     | extracted standard info from prmon json
[2025-04-18 19:36:56] 2025-04-18 23:36:36,189 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 19:36:56] 2025-04-18 23:36:36,189 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 19:36:56] 2025-04-18 23:36:36,189 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 19:36:56] 2025-04-18 23:36:36,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 19:36:56] 2025-04-18 23:36:36,191 | INFO     | fitting pss+swap vs Time
[2025-04-18 19:36:56] 2025-04-18 23:36:36,191 | INFO     | sum of square deviations: 136095575.0
[2025-04-18 19:36:56] 2025-04-18 23:36:36,192 | INFO     | sum of deviations: 27483169298.999996
[2025-04-18 19:36:56] 2025-04-18 23:36:36,192 | INFO     | mean x: 1745016946.5
[2025-04-18 19:36:56] 2025-04-18 23:36:36,192 | INFO     | mean y: 2607975.0263157897
[2025-04-18 19:36:56] 2025-04-18 23:36:36,192 | INFO     | -- intersect: -352386484545.3111
[2025-04-18 19:36:56] 2025-04-18 23:36:36,192 | INFO     | intersect: -352386484545.3111
[2025-04-18 19:36:56] 2025-04-18 23:36:36,193 | INFO     | chi2: 2.5536322060444716
[2025-04-18 19:36:56] 2025-04-18 23:36:36,193 | INFO     | -- intersect: -352386484545.3111
[2025-04-18 19:36:56] 2025-04-18 23:36:36,193 | INFO     | current memory leak: 201.94 B/s (using 76 data points, chi2=2.55)
[2025-04-18 19:36:56] 2025-04-18 23:36:36,193 | INFO     | ..............................
[2025-04-18 19:36:56] 2025-04-18 23:36:36,193 | INFO     | . Timing measurements:
[2025-04-18 19:36:56] 2025-04-18 23:36:36,193 | INFO     | . get job = 0 s
[2025-04-18 19:36:56] 2025-04-18 23:36:36,193 | INFO     | . initial setup = 3 s
[2025-04-18 19:36:56] 2025-04-18 23:36:36,194 | INFO     | . payload setup = 7 s
[2025-04-18 19:36:56] 2025-04-18 23:36:36,194 | INFO     | . stage-in = 0 s
[2025-04-18 19:36:56] 2025-04-18 23:36:36,194 | INFO     | . payload execution = 5036 s
[2025-04-18 19:36:56] 2025-04-18 23:36:36,194 | INFO     | . stage-out = 0 s
[2025-04-18 19:36:56] 2025-04-18 23:36:36,194 | INFO     | . log creation = 0 s
[2025-04-18 19:36:56] 2025-04-18 23:36:36,194 | INFO     | ..............................
[2025-04-18 19:36:56] 2025-04-18 23:36:36,279 | INFO     | 
[2025-04-18 19:36:56] 2025-04-18 23:36:36,279 | INFO     | job summary report
[2025-04-18 19:36:56] 2025-04-18 23:36:36,279 | INFO     | --------------------------------------------------
[2025-04-18 19:36:56] 2025-04-18 23:36:36,279 | INFO     | PanDA job id: 6606784030
[2025-04-18 19:36:56] 2025-04-18 23:36:36,279 | INFO     | task id: 44075483
[2025-04-18 19:36:56] 2025-04-18 23:36:36,280 | INFO     | errors: (none)
[2025-04-18 19:36:56] 2025-04-18 23:36:36,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 19:36:56] 2025-04-18 23:36:36,280 | INFO     | pilot state: finished 
[2025-04-18 19:36:56] 2025-04-18 23:36:36,280 | INFO     | transexitcode: 0
[2025-04-18 19:36:56] 2025-04-18 23:36:36,280 | INFO     | exeerrorcode: 0
[2025-04-18 19:36:56] 2025-04-18 23:36:36,280 | INFO     | exeerrordiag: 
[2025-04-18 19:36:56] 2025-04-18 23:36:36,281 | INFO     | exitcode: 0
[2025-04-18 19:36:56] 2025-04-18 23:36:36,281 | INFO     | exitmsg: OK
[2025-04-18 19:36:56] 2025-04-18 23:36:36,281 | INFO     | cpuconsumptiontime: 47349 s
[2025-04-18 19:36:56] 2025-04-18 23:36:36,281 | INFO     | nevents: 400
[2025-04-18 19:36:56] 2025-04-18 23:36:36,281 | INFO     | neventsw: 0
[2025-04-18 19:36:56] 2025-04-18 23:36:36,281 | INFO     | pid: 14618
[2025-04-18 19:36:56] 2025-04-18 23:36:36,281 | INFO     | pgrp: 14618
[2025-04-18 19:36:56] 2025-04-18 23:36:36,282 | INFO     | corecount: 12
[2025-04-18 19:36:56] 2025-04-18 23:36:36,282 | INFO     | event service: False
[2025-04-18 19:36:56] 2025-04-18 23:36:36,282 | INFO     | sizes: {0: 2426546, 1: 2426801, 6: 2427007, 12: 2427035, 5048: 2453184, 5049: 2462125, 5050: 2462309, 5056: 2462479}
[2025-04-18 19:36:56] 2025-04-18 23:36:36,282 | INFO     | --------------------------------------------------
[2025-04-18 19:36:56] 2025-04-18 23:36:36,282 | INFO     | 
[2025-04-18 19:36:56] 2025-04-18 23:36:36,283 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 19:36:56] 2025-04-18 23:36:36,306 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,306 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,306 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 19:36:56] 2025-04-18 23:36:36,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 19:36:56] 2025-04-18 23:36:36,309 | INFO     | job 6606784030 has completed (purged errors)
[2025-04-18 19:36:56] 2025-04-18 23:36:36,310 | INFO     | overall cleanup function is called
[2025-04-18 19:36:56] 2025-04-18 23:36:37,317 | INFO     | --- collectZombieJob: --- 10, [14618]
[2025-04-18 19:36:56] 2025-04-18 23:36:37,317 | INFO     | zombie collector waiting for pid 14618
[2025-04-18 19:36:56] 2025-04-18 23:36:37,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 19:36:56] 2025-04-18 23:36:37,317 | INFO     | collected zombie processes
[2025-04-18 19:36:56] 2025-04-18 23:36:37,317 | INFO     | will attempt to kill all subprocesses of pid=14618
[2025-04-18 19:36:56] 2025-04-18 23:36:37,409 | INFO     | process IDs to be killed: [14618] (in reverse order)
[2025-04-18 19:36:56] 2025-04-18 23:36:37,460 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 19:36:56] 2025-04-18 23:36:37,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 19:36:56] 2025-04-18 23:36:37,473 | INFO     | did not find any defunct processes belonging to 14618
[2025-04-18 19:36:56] 2025-04-18 23:36:37,475 | INFO     | did not find any defunct processes belonging to 14618
[2025-04-18 19:36:56] 2025-04-18 23:36:37,475 | INFO     | ready for new job
[2025-04-18 19:36:56] 2025-04-18 23:36:37,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 19:36:56] 2025-04-18 23:36:37,476 | INFO     | **************************************
[2025-04-18 19:36:56] 2025-04-18 23:36:37,477 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 19:36:56] 2025-04-18 23:36:37,477 | INFO     | **************************************
[2025-04-18 19:36:56] 2025-04-18 23:36:37,477 | INFO     | 
[2025-04-18 19:36:56] 2025-04-18 23:36:37,477 | INFO     | architecture information:
[2025-04-18 19:36:56] 2025-04-18 23:36:37,478 | INFO     | executing command: cat /etc/os-release
[2025-04-18 19:36:56] 2025-04-18 23:36:37,494 | INFO     | cat /etc/os-release:
[2025-04-18 19:36:56] NAME="CentOS Linux"
[2025-04-18 19:36:56] VERSION="7 (Core)"
[2025-04-18 19:36:56] ID="centos"
[2025-04-18 19:36:56] ID_LIKE="rhel fedora"
[2025-04-18 19:36:56] VERSION_ID="7"
[2025-04-18 19:36:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 19:36:56] ANSI_COLOR="0;31"
[2025-04-18 19:36:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 19:36:56] HOME_URL="https://www.centos.org/"
[2025-04-18 19:36:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 19:36:56] 
[2025-04-18 19:36:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 19:36:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 19:36:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 19:36:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 19:36:56] 
[2025-04-18 19:36:56] 2025-04-18 23:36:37,494 | INFO     | **************************************
[2025-04-18 19:36:56] 2025-04-18 23:36:37,997 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 19:36:56] 2025-04-18 23:36:38,041 | INFO     | sufficient remaining disk space (29392633856 B)
[2025-04-18 19:36:56] 2025-04-18 23:36:38,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 19:36:56] 2025-04-18 23:36:38,042 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 19:36:56] 2025-04-18 23:36:38,042 | INFO     | update_server=False
[2025-04-18 19:36:56] 2025-04-18 23:36:38,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 19:36:56] 2025-04-18 23:36:38,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:36:56] 2025-04-18 23:36:38,110 | INFO     | all payload control threads have been joined
[2025-04-18 19:36:56] 2025-04-18 23:36:38,115 | INFO     | all data control threads have been joined
[2025-04-18 19:36:56] 2025-04-18 23:36:38,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:36:56] 2025-04-18 23:36:38,471 | INFO     | aborting loop
[2025-04-18 19:36:56] 2025-04-18 23:36:38,543 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 19:36:56] 2025-04-18 23:36:38,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 19:36:56] 2025-04-18 23:36:38,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 19:36:56] 2025-04-18 23:36:39,048 | INFO     | [job] retrieve thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:39,048 | INFO     | [job] queue monitor thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:39,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 19:36:56] 2025-04-18 23:36:39,094 | INFO     | [payload] failed_post thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:39,115 | INFO     | [payload] control thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:39,121 | INFO     | [data] control thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:39,148 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:39,208 | INFO     | all job control threads have been joined
[2025-04-18 19:36:56] 2025-04-18 23:36:39,472 | INFO     | [job] job monitor thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:39,787 | INFO     | [job] validate thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:39,899 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:39,939 | INFO     | [payload] validate_post thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:40,180 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:40,214 | INFO     | [job] control thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:40,391 | INFO     | [data] copytool_in thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:40,433 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 19:36:56] 2025-04-18 23:36:41,099 | INFO     | [data] copytool_out thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:44,439 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:48,706 | INFO     | job.realtimelogging is not enabled
[2025-04-18 19:36:56] 2025-04-18 23:36:49,711 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 19:36:56] 2025-04-18 23:36:50,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140696991708992)>', '<ExcThread(monitor, started 140696367372032)>']
[2025-04-18 19:36:56] 2025-04-18 23:36:51,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 19:36:56] 2025-04-18 23:36:51,597 | INFO     | [monitor] control thread has ended
[2025-04-18 19:36:56] 2025-04-18 23:36:55,902 | INFO     | all workflow threads have been joined
[2025-04-18 19:36:56] 2025-04-18 23:36:55,903 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 19:36:56] 2025-04-18 23:36:55,903 | INFO     | traces error code: 0
[2025-04-18 19:36:56] 2025-04-18 23:36:55,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 19:36:56] 2025-04-18 23:36:55,993 [wrapper] ==== pilot stdout END ====
[2025-04-18 19:36:56] 2025-04-18 23:36:55,997 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 19:36:56] 2025-04-18 23:36:56,001 [wrapper] pilotpid: 8192
[2025-04-18 19:36:56] 2025-04-18 23:36:56,005 [wrapper] Pilot exit status: 0
[2025-04-18 19:36:56] 2025-04-18 23:36:56,021 [wrapper] pandaids: 6606784030
[2025-04-18 19:36:56] 2025-04-18 23:36:56,057 [wrapper] cleanup supervisor_pilot 26264 8193
[2025-04-18 19:36:56] 2025-04-18 23:36:56,061 [wrapper] Test setup, not cleaning
[2025-04-18 19:36:56] 2025-04-18 23:36:56,065 [wrapper] apfmon messages muted
[2025-04-18 19:36:56] 2025-04-18 23:36:56,069 [wrapper] ==== wrapper stdout END ====
[2025-04-18 19:36:56] 2025-04-18 23:36:56,073 [wrapper] ==== wrapper stderr END ====
[2025-04-18 19:36:56]  *** Error codes and diagnostics ***
[2025-04-18 19:36:56]     "exeErrorCode": 0,
[2025-04-18 19:36:56]     "exeErrorDiag": "",
[2025-04-18 19:36:56]     "pilotErrorCode": 0,
[2025-04-18 19:36:56]     "pilotErrorDiag": "",
[2025-04-18 19:36:56]  *** Listing of results directory ***
[2025-04-18 19:36:56] total 417904
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 15:19 pilot3.tar.gz
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 15:22 queuedata.json
[2025-04-18 19:36:56] -rwx------ 1 boincer umatlas     37140 Apr 18 15:23 runpilot2-wrapper.sh
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas       100 Apr 18 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 19:36:56] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 18:11 run_atlas
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas       105 Apr 18 18:11 job.xml
[2025-04-18 19:36:56] -rw-r--r-- 2 boincer umatlas 226310178 Apr 18 18:11 EVNT.44075481._002845.pool.root.1
[2025-04-18 19:36:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:11 start_atlas.sh
[2025-04-18 19:36:56] drwxrwx--x 2 boincer umatlas      4096 Apr 18 18:11 shared
[2025-04-18 19:36:56] -rw-r--r-- 2 boincer umatlas    508899 Apr 18 18:11 input.tar.gz
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas         0 Apr 18 18:11 boinc_lockfile
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 18:11 pandaJob.out
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas       424 Apr 18 18:11 setup.sh.local
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas    991300 Apr 18 18:12 agis_schedconf.cvmfs.json
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas   1618536 Apr 18 18:12 agis_ddmendpoints.agis.ALL.json
[2025-04-18 19:36:56] drwx------ 4 boincer umatlas      4096 Apr 18 18:12 pilot3
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas      5868 Apr 18 19:32 init_data.xml
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas 196079605 Apr 18 19:35 HITS.44075483._073244.pool.root.1
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas        95 Apr 18 19:36 pilot_heartbeat.json
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas       529 Apr 18 19:36 boinc_task_state.xml
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas      1047 Apr 18 19:36 memory_monitor_summary.json
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas    356712 Apr 18 19:36 log.44075483._073244.job.log.tgz.1
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas        27 Apr 18 19:36 wrapper_checkpoint.txt
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 19:36 boinc_mmap_file
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas      7748 Apr 18 19:36 heartbeat.json
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas      4425 Apr 18 19:36 pilotlog.txt
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas    479734 Apr 18 19:36 log.44075483._073244.job.log.1
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas       357 Apr 18 19:36 output.list
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas       620 Apr 18 19:36 runtime_log
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas    860160 Apr 18 19:36 result.tar.gz
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 19:36 runtime_log.err
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas       658 Apr 18 19:36 DEQMDmGU6P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmOV5KDmjE3oJo.diag
[2025-04-18 19:36:56] -rw-r--r-- 1 boincer umatlas     21265 Apr 18 19:36 stderr.txt
[2025-04-18 19:36:56] HITS file was successfully produced:
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas 196079605 Apr 18 19:35 shared/HITS.pool.root.1
[2025-04-18 19:36:56]  *** Contents of shared directory: ***
[2025-04-18 19:36:56] total 413856
[2025-04-18 19:36:56] -rw-r--r-- 2 boincer umatlas 226310178 Apr 18 18:11 ATLAS.root_0
[2025-04-18 19:36:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:11 start_atlas.sh
[2025-04-18 19:36:56] -rw-r--r-- 2 boincer umatlas    508899 Apr 18 18:11 input.tar.gz
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas 196079605 Apr 18 19:35 HITS.pool.root.1
[2025-04-18 19:36:56] -rw------- 1 boincer umatlas    860160 Apr 18 19:36 result.tar.gz
19:36:57 (4223): run_atlas exited; CPU time 47338.081129
19:36:57 (4223): called boinc_finish(0)

</stderr_txt>
]]>

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