Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:11:31 (6558): wrapper (7.7.26015): starting
18:11:31 (6558): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 18:11:31] Arguments: --nthreads 12
[2025-04-18 18:11:31] Threads: 12
[2025-04-18 18:11:31] Checking for CVMFS
[2025-04-18 18:11:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 18:11:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 18:11:32] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 18:11:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 18:11:32] 2.11.2.0 3078 57823 144892 145017 1 55 18756170 20275200 1 130560 0 24923910 99.985 7215681 58486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 18:11:32] CVMFS is ok
[2025-04-18 18:11:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 18:11:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 18:11:32] Further information can be found at the LHC@home message board.
[2025-04-18 18:11:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 18:11:32] Checking for apptainer binary...
[2025-04-18 18:11:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 18:11:32] Running /usr/bin/apptainer --version
[2025-04-18 18:11:32] apptainer version 1.3.2-1.el7
[2025-04-18 18:11:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 18:11:33] c-115-41.aglt2.org
[2025-04-18 18:11:33] apptainer works
[2025-04-18 18:11:33] Set ATHENA_PROC_NUMBER=12
[2025-04-18 18:11:33] Set ATHENA_CORE_NUMBER=12
[2025-04-18 18:11:33] Starting ATLAS job with PandaID=6606784031
[2025-04-18 18:11:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 19:27:42]  *** The last 200 lines of the pilot log: ***
[2025-04-18 19:27:42]  filetype=log
[2025-04-18 19:27:42]  guid=67b096b1-ecdf-49b3-830f-7da1783c6aca
[2025-04-18 19:27:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-18 19:27:42]  is_altstaged=None
[2025-04-18 19:27:42]  is_tar=False
[2025-04-18 19:27:42]  lfn=log.44075483._073245.job.log.tgz.1
[2025-04-18 19:27:42]  mtime=0
[2025-04-18 19:27:42]  protocol_id=None
[2025-04-18 19:27:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 19:27:42]  replicas=None
[2025-04-18 19:27:42]  scope=mc23_13p6TeV
[2025-04-18 19:27:42]  status=None
[2025-04-18 19:27:42]  status_code=0
[2025-04-18 19:27:42]  storage_token=
[2025-04-18 19:27:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6606784031/log.44075483._073245.job.log.tgz.1
[2025-04-18 19:27:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/47/log.44075483._073245.job.log.tgz.1
[2025-04-18 19:27:42]  workdir=None
[2025-04-18 19:27:42] ]
[2025-04-18 19:27:42] 2025-04-18 23:27:24,518 | INFO     | transferring file log.44075483._073245.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6606784031/log.44075483._073245.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-18 19:27:42] 2025-04-18 23:27:24,518 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6606784031/log.44075483._073245.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._073245.job
[2025-04-18 19:27:42] 2025-04-18 23:27:24,543 | INFO     | adding to output.list: log.44075483._073245.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/47/log.44075483._073245.job.log.tg
[2025-04-18 19:27:42] 2025-04-18 23:27:24,544 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 19:27:42] 2025-04-18 23:27:24,544 | INFO     | summary of transferred files:
[2025-04-18 19:27:42] 2025-04-18 23:27:24,544 | INFO     |  -- lfn=log.44075483._073245.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 19:27:42] 2025-04-18 23:27:24,545 | INFO     | stage-out finished correctly
[2025-04-18 19:27:42] 2025-04-18 23:27:24,625 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 19:27:42] 2025-04-18 23:27:24,704 | INFO     | job 6606784031 has state=finished
[2025-04-18 19:27:42] 2025-04-18 23:27:24,704 | INFO     | preparing for final server update for job 6606784031 in state='finished'
[2025-04-18 19:27:42] 2025-04-18 23:27:24,766 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-18 19:27:42] 2025-04-18 23:27:24,766 | INFO     | this job has now completed (state=finished)
[2025-04-18 19:27:42] 2025-04-18 23:27:24,766 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 19:27:42] 2025-04-18 23:27:24,766 | INFO     | log transfer has been attempted: DONE
[2025-04-18 19:27:42] 2025-04-18 23:27:24,766 | INFO     | job 6606784031 has finished - writing final server update
[2025-04-18 19:27:42] 2025-04-18 23:27:24,767 | INFO     | total number of processed events: 400 (read)
[2025-04-18 19:27:42] 2025-04-18 23:27:24,768 | INFO     | executing command: lscpu
[2025-04-18 19:27:42] 2025-04-18 23:27:24,795 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 19:27:42] 2025-04-18 23:27:25,091 | INFO     | monitor loop #340: job 0:6606784031 is in state 'finished'
[2025-04-18 19:27:42] 2025-04-18 23:27:25,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 19:27:42] 2025-04-18 23:27:27,594 | INFO     | monitor loop #341: job 0:6606784031 is in state 'finished'
[2025-04-18 19:27:42] 2025-04-18 23:27:27,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 19:27:42] 2025-04-18 23:27:27,619 | INFO     | PID=10200 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-18 19:27:42] 2025-04-18 23:27:29,763 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-18 19:27:42] 2025-04-18 23:27:29,764 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6606784031/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 19:27:42] 2025-04-18 23:27:29,765 | INFO     | extracted standard info from prmon json
[2025-04-18 19:27:42] 2025-04-18 23:27:29,765 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 19:27:42] 2025-04-18 23:27:29,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 19:27:42] 2025-04-18 23:27:29,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 19:27:42] 2025-04-18 23:27:29,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 19:27:42] 2025-04-18 23:27:29,768 | INFO     | fitting pss+swap vs Time
[2025-04-18 19:27:42] 2025-04-18 23:27:29,768 | INFO     | sum of square deviations: 93240818.0
[2025-04-18 19:27:42] 2025-04-18 23:27:29,769 | INFO     | sum of deviations: 24427357890.000004
[2025-04-18 19:27:42] 2025-04-18 23:27:29,769 | INFO     | mean x: 1745016653.0
[2025-04-18 19:27:42] 2025-04-18 23:27:29,769 | INFO     | mean y: 2664190.9104477614
[2025-04-18 19:27:42] 2025-04-18 23:27:29,769 | INFO     | -- intersect: -457159201407.9193
[2025-04-18 19:27:42] 2025-04-18 23:27:29,769 | INFO     | intersect: -457159201407.9193
[2025-04-18 19:27:42] 2025-04-18 23:27:29,769 | INFO     | chi2: 2.2644849823371986
[2025-04-18 19:27:42] 2025-04-18 23:27:29,769 | INFO     | -- intersect: -457159201407.9193
[2025-04-18 19:27:42] 2025-04-18 23:27:29,770 | INFO     | current memory leak: 261.98 B/s (using 67 data points, chi2=2.26)
[2025-04-18 19:27:42] 2025-04-18 23:27:29,770 | INFO     | ..............................
[2025-04-18 19:27:42] 2025-04-18 23:27:29,770 | INFO     | . Timing measurements:
[2025-04-18 19:27:42] 2025-04-18 23:27:29,770 | INFO     | . get job = 0 s
[2025-04-18 19:27:42] 2025-04-18 23:27:29,770 | INFO     | . initial setup = 2 s
[2025-04-18 19:27:42] 2025-04-18 23:27:29,770 | INFO     | . payload setup = 7 s
[2025-04-18 19:27:42] 2025-04-18 23:27:29,770 | INFO     | . stage-in = 0 s
[2025-04-18 19:27:42] 2025-04-18 23:27:29,771 | INFO     | . payload execution = 4509 s
[2025-04-18 19:27:42] 2025-04-18 23:27:29,771 | INFO     | . stage-out = 0 s
[2025-04-18 19:27:42] 2025-04-18 23:27:29,771 | INFO     | . log creation = 0 s
[2025-04-18 19:27:42] 2025-04-18 23:27:29,771 | INFO     | ..............................
[2025-04-18 19:27:42] 2025-04-18 23:27:29,851 | INFO     | 
[2025-04-18 19:27:42] 2025-04-18 23:27:29,851 | INFO     | job summary report
[2025-04-18 19:27:42] 2025-04-18 23:27:29,851 | INFO     | --------------------------------------------------
[2025-04-18 19:27:42] 2025-04-18 23:27:29,851 | INFO     | PanDA job id: 6606784031
[2025-04-18 19:27:42] 2025-04-18 23:27:29,852 | INFO     | task id: 44075483
[2025-04-18 19:27:42] 2025-04-18 23:27:29,852 | INFO     | errors: (none)
[2025-04-18 19:27:42] 2025-04-18 23:27:29,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 19:27:42] 2025-04-18 23:27:29,852 | INFO     | pilot state: finished 
[2025-04-18 19:27:42] 2025-04-18 23:27:29,852 | INFO     | transexitcode: 0
[2025-04-18 19:27:42] 2025-04-18 23:27:29,852 | INFO     | exeerrorcode: 0
[2025-04-18 19:27:42] 2025-04-18 23:27:29,853 | INFO     | exeerrordiag: 
[2025-04-18 19:27:42] 2025-04-18 23:27:29,853 | INFO     | exitcode: 0
[2025-04-18 19:27:42] 2025-04-18 23:27:29,853 | INFO     | exitmsg: OK
[2025-04-18 19:27:42] 2025-04-18 23:27:29,853 | INFO     | cpuconsumptiontime: 42432 s
[2025-04-18 19:27:42] 2025-04-18 23:27:29,853 | INFO     | nevents: 400
[2025-04-18 19:27:42] 2025-04-18 23:27:29,853 | INFO     | neventsw: 0
[2025-04-18 19:27:42] 2025-04-18 23:27:29,853 | INFO     | pid: 16628
[2025-04-18 19:27:42] 2025-04-18 23:27:29,854 | INFO     | pgrp: 16628
[2025-04-18 19:27:42] 2025-04-18 23:27:29,854 | INFO     | corecount: 12
[2025-04-18 19:27:42] 2025-04-18 23:27:29,854 | INFO     | event service: False
[2025-04-18 19:27:42] 2025-04-18 23:27:29,854 | INFO     | sizes: {0: 2426773, 5: 2426979, 11: 2427035, 4520: 2453016, 4522: 2462013, 4527: 2462127}
[2025-04-18 19:27:42] 2025-04-18 23:27:29,854 | INFO     | --------------------------------------------------
[2025-04-18 19:27:42] 2025-04-18 23:27:29,854 | INFO     | 
[2025-04-18 19:27:42] 2025-04-18 23:27:29,855 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-18 19:27:42] 2025-04-18 23:27:29,879 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,882 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 19:27:42] 2025-04-18 23:27:29,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,883 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 19:27:42] 2025-04-18 23:27:29,883 | INFO     | job 6606784031 has completed (purged errors)
[2025-04-18 19:27:42] 2025-04-18 23:27:29,883 | INFO     | overall cleanup function is called
[2025-04-18 19:27:42] 2025-04-18 23:27:30,892 | INFO     | --- collectZombieJob: --- 10, [16628]
[2025-04-18 19:27:42] 2025-04-18 23:27:30,892 | INFO     | zombie collector waiting for pid 16628
[2025-04-18 19:27:42] 2025-04-18 23:27:30,892 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 19:27:42] 2025-04-18 23:27:30,892 | INFO     | collected zombie processes
[2025-04-18 19:27:42] 2025-04-18 23:27:30,893 | INFO     | will attempt to kill all subprocesses of pid=16628
[2025-04-18 19:27:42] 2025-04-18 23:27:30,979 | INFO     | process IDs to be killed: [16628] (in reverse order)
[2025-04-18 19:27:42] 2025-04-18 23:27:31,030 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 19:27:42] 2025-04-18 23:27:31,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 19:27:42] 2025-04-18 23:27:31,035 | INFO     | did not find any defunct processes belonging to 16628
[2025-04-18 19:27:42] 2025-04-18 23:27:31,038 | INFO     | did not find any defunct processes belonging to 16628
[2025-04-18 19:27:42] 2025-04-18 23:27:31,038 | INFO     | ready for new job
[2025-04-18 19:27:42] 2025-04-18 23:27:31,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 19:27:42] 2025-04-18 23:27:31,039 | INFO     | **************************************
[2025-04-18 19:27:42] 2025-04-18 23:27:31,039 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 19:27:42] 2025-04-18 23:27:31,039 | INFO     | **************************************
[2025-04-18 19:27:42] 2025-04-18 23:27:31,039 | INFO     | 
[2025-04-18 19:27:42] 2025-04-18 23:27:31,040 | INFO     | architecture information:
[2025-04-18 19:27:42] 2025-04-18 23:27:31,040 | INFO     | executing command: cat /etc/os-release
[2025-04-18 19:27:42] 2025-04-18 23:27:31,055 | INFO     | cat /etc/os-release:
[2025-04-18 19:27:42] NAME="CentOS Linux"
[2025-04-18 19:27:42] VERSION="7 (Core)"
[2025-04-18 19:27:42] ID="centos"
[2025-04-18 19:27:42] ID_LIKE="rhel fedora"
[2025-04-18 19:27:42] VERSION_ID="7"
[2025-04-18 19:27:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 19:27:42] ANSI_COLOR="0;31"
[2025-04-18 19:27:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 19:27:42] HOME_URL="https://www.centos.org/"
[2025-04-18 19:27:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 19:27:42] 
[2025-04-18 19:27:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 19:27:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 19:27:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 19:27:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 19:27:42] 
[2025-04-18 19:27:42] 2025-04-18 23:27:31,055 | INFO     | **************************************
[2025-04-18 19:27:42] 2025-04-18 23:27:31,558 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-18 19:27:42] 2025-04-18 23:27:31,575 | INFO     | sufficient remaining disk space (18608029696 B)
[2025-04-18 19:27:42] 2025-04-18 23:27:31,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 19:27:42] 2025-04-18 23:27:31,576 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 19:27:42] 2025-04-18 23:27:31,576 | INFO     | update_server=False
[2025-04-18 19:27:42] 2025-04-18 23:27:31,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 19:27:42] 2025-04-18 23:27:31,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 19:27:42] 2025-04-18 23:27:31,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:27:42] 2025-04-18 23:27:31,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 19:27:42] 2025-04-18 23:27:31,577 | INFO     | aborting loop
[2025-04-18 19:27:42] 2025-04-18 23:27:31,630 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 19:27:42] 2025-04-18 23:27:31,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 19:27:42] 2025-04-18 23:27:31,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 19:27:42] 2025-04-18 23:27:31,927 | INFO     | all payload control threads have been joined
[2025-04-18 19:27:42] 2025-04-18 23:27:31,955 | INFO     | all data control threads have been joined
[2025-04-18 19:27:42] 2025-04-18 23:27:32,121 | INFO     | all job control threads have been joined
[2025-04-18 19:27:42] 2025-04-18 23:27:32,582 | INFO     | [job] retrieve thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:32,583 | INFO     | [job] queue monitor thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:32,583 | INFO     | [job] job monitor thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:32,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 19:27:42] 2025-04-18 23:27:32,747 | INFO     | [payload] failed_post thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:32,758 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:32,933 | INFO     | [payload] control thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:32,959 | INFO     | [data] control thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:33,124 | INFO     | [job] control thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:33,449 | INFO     | [payload] validate_post thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:33,481 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:33,481 | INFO     | [job] validate thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:33,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:33,797 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:34,055 | INFO     | [data] copytool_in thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:34,640 | INFO     | [data] copytool_out thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:35,582 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 19:27:42] 2025-04-18 23:27:37,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610054563648)>', '<ExcThread(monitor, started 140609595610880)>']
[2025-04-18 19:27:42] 2025-04-18 23:27:37,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 19:27:42] 2025-04-18 23:27:37,657 | INFO     | [monitor] control thread has ended
[2025-04-18 19:27:42] 2025-04-18 23:27:42,195 | INFO     | all workflow threads have been joined
[2025-04-18 19:27:42] 2025-04-18 23:27:42,207 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 19:27:42] 2025-04-18 23:27:42,207 | INFO     | traces error code: 0
[2025-04-18 19:27:42] 2025-04-18 23:27:42,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 19:27:42] 2025-04-18 23:27:42,289 [wrapper] ==== pilot stdout END ====
[2025-04-18 19:27:42] 2025-04-18 23:27:42,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 19:27:42] 2025-04-18 23:27:42,298 [wrapper] pilotpid: 10200
[2025-04-18 19:27:42] 2025-04-18 23:27:42,301 [wrapper] Pilot exit status: 0
[2025-04-18 19:27:42] 2025-04-18 23:27:42,317 [wrapper] pandaids: 6606784031
[2025-04-18 19:27:42] 2025-04-18 23:27:42,357 [wrapper] cleanup supervisor_pilot 19572 10201
[2025-04-18 19:27:42] 2025-04-18 23:27:42,361 [wrapper] Test setup, not cleaning
[2025-04-18 19:27:42] 2025-04-18 23:27:42,365 [wrapper] apfmon messages muted
[2025-04-18 19:27:42] 2025-04-18 23:27:42,369 [wrapper] ==== wrapper stdout END ====
[2025-04-18 19:27:42] 2025-04-18 23:27:42,373 [wrapper] ==== wrapper stderr END ====
[2025-04-18 19:27:42]  *** Error codes and diagnostics ***
[2025-04-18 19:27:42]     "exeErrorCode": 0,
[2025-04-18 19:27:42]     "exeErrorDiag": "",
[2025-04-18 19:27:42]     "pilotErrorCode": 0,
[2025-04-18 19:27:42]     "pilotErrorDiag": "",
[2025-04-18 19:27:42]  *** Listing of results directory ***
[2025-04-18 19:27:42] total 421840
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 15:19 pilot3.tar.gz
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 15:22 queuedata.json
[2025-04-18 19:27:42] -rwx------ 1 boincer umatlas     37140 Apr 18 15:23 runpilot2-wrapper.sh
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas       100 Apr 18 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 19:27:42] -rwxr-xr-x 1 boincer umatlas      7986 Apr 18 18:11 run_atlas
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas       105 Apr 18 18:11 job.xml
[2025-04-18 19:27:42] -rw-r--r-- 2 boincer umatlas    508895 Apr 18 18:11 input.tar.gz
[2025-04-18 19:27:42] -rw-r--r-- 2 boincer umatlas 226310178 Apr 18 18:11 EVNT.44075481._002845.pool.root.1
[2025-04-18 19:27:42] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:11 start_atlas.sh
[2025-04-18 19:27:42] drwxrwx--x 2 boincer umatlas      4096 Apr 18 18:11 shared
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas         0 Apr 18 18:11 boinc_lockfile
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 18:11 pandaJob.out
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas       424 Apr 18 18:11 setup.sh.local
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas    991300 Apr 18 18:11 agis_schedconf.cvmfs.json
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas   1618536 Apr 18 18:11 agis_ddmendpoints.agis.ALL.json
[2025-04-18 19:27:42] drwx------ 4 boincer umatlas      4096 Apr 18 18:11 pilot3
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas      5869 Apr 18 19:20 init_data.xml
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas        95 Apr 18 19:26 pilot_heartbeat.json
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas 200208118 Apr 18 19:26 HITS.44075483._073245.pool.root.1
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas      1050 Apr 18 19:27 memory_monitor_summary.json
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas        27 Apr 18 19:27 wrapper_checkpoint.txt
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 19:27 boinc_mmap_file
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas       529 Apr 18 19:27 boinc_task_state.xml
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas    356886 Apr 18 19:27 log.44075483._073245.job.log.tgz.1
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas      7751 Apr 18 19:27 heartbeat.json
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas      4353 Apr 18 19:27 pilotlog.txt
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas    436734 Apr 18 19:27 log.44075483._073245.job.log.1
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas       357 Apr 18 19:27 output.list
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas       620 Apr 18 19:27 runtime_log
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas    808960 Apr 18 19:27 result.tar.gz
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas     11015 Apr 18 19:27 runtime_log.err
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas       658 Apr 18 19:27 Q7SMDmGU6P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmPV5KDmkEMxqm.diag
[2025-04-18 19:27:42] -rw-r--r-- 1 boincer umatlas     21268 Apr 18 19:27 stderr.txt
[2025-04-18 19:27:42] HITS file was successfully produced:
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas 200208118 Apr 18 19:26 shared/HITS.pool.root.1
[2025-04-18 19:27:42]  *** Contents of shared directory: ***
[2025-04-18 19:27:42] total 417836
[2025-04-18 19:27:42] -rw-r--r-- 2 boincer umatlas    508895 Apr 18 18:11 input.tar.gz
[2025-04-18 19:27:42] -rw-r--r-- 2 boincer umatlas 226310178 Apr 18 18:11 ATLAS.root_0
[2025-04-18 19:27:42] -rw-r--r-- 2 boincer umatlas     17569 Apr 18 18:11 start_atlas.sh
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas 200208118 Apr 18 19:26 HITS.pool.root.1
[2025-04-18 19:27:42] -rw------- 1 boincer umatlas    808960 Apr 18 19:27 result.tar.gz
19:27:43 (6558): run_atlas exited; CPU time 42437.479758
19:27:43 (6558): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN