Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:37:09 (1306207): wrapper (7.7.26015): starting
09:37:09 (1306207): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 09:37:09] Arguments: --nthreads 4
[2025-04-19 09:37:09] Threads: 4
[2025-04-19 09:37:09] Checking for CVMFS
[2025-04-19 09:37:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 09:37:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 09:37:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 09:37:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 09:37:09] 2.9.2.0 1996817 10387 99504 145030 2 56 19578578 36864000 0 130560 0 8214162 99.939 2722859 7501 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 09:37:09] CVMFS is ok
[2025-04-19 09:37:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 09:37:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 09:37:09] Further information can be found at the LHC@home message board.
[2025-04-19 09:37:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 09:37:09] Checking for apptainer binary...
[2025-04-19 09:37:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 09:37:09] Running /usr/bin/apptainer --version
[2025-04-19 09:37:09] apptainer version 1.3.6-4.2
[2025-04-19 09:37:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 09:37:09] thA319
[2025-04-19 09:37:09] apptainer works
[2025-04-19 09:37:09] Set ATHENA_PROC_NUMBER=4
[2025-04-19 09:37:09] Set ATHENA_CORE_NUMBER=4
[2025-04-19 09:37:09] Starting ATLAS job with PandaID=6606784026
[2025-04-19 09:37:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 10:54:05]  *** The last 200 lines of the pilot log: ***
[2025-04-19 10:54:05]  guid=cbd4a190-15f9-4e65-b964-8380aedd1334
[2025-04-19 10:54:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 10:54:05]  is_altstaged=None
[2025-04-19 10:54:05]  is_tar=False
[2025-04-19 10:54:05]  lfn=log.44075483._073240.job.log.tgz.1
[2025-04-19 10:54:05]  mtime=0
[2025-04-19 10:54:05]  protocol_id=None
[2025-04-19 10:54:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 10:54:05]  replicas=None
[2025-04-19 10:54:05]  scope=mc23_13p6TeV
[2025-04-19 10:54:05]  status=None
[2025-04-19 10:54:05]  status_code=0
[2025-04-19 10:54:05]  storage_token=
[2025-04-19 10:54:05]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6606784026/log.44075483._073240.job.log.tgz.1
[2025-04-19 10:54:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/94/log.44075483._073240.job.log.tgz.1
[2025-04-19 10:54:05]  workdir=None
[2025-04-19 10:54:05] ]
[2025-04-19 10:54:05] 2025-04-19 08:53:38,343 | INFO     | transferring file log.44075483._073240.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6606784026/log.44075483._073240.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 10:54:05] 2025-04-19 08:53:38,343 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6606784026/log.44075483._073240.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0732
[2025-04-19 10:54:05] 2025-04-19 08:53:38,360 | INFO     | adding to output.list: log.44075483._073240.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/94/log.44075483._073240.job.log.tg
[2025-04-19 10:54:05] 2025-04-19 08:53:38,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 10:54:05] 2025-04-19 08:53:38,361 | INFO     | summary of transferred files:
[2025-04-19 10:54:05] 2025-04-19 08:53:38,361 | INFO     |  -- lfn=log.44075483._073240.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 10:54:05] 2025-04-19 08:53:38,361 | INFO     | stage-out finished correctly
[2025-04-19 10:54:05] 2025-04-19 08:53:38,492 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 10:54:05] 2025-04-19 08:53:40,824 | INFO     | monitor loop #353: job 0:6606784026 is in state 'finished'
[2025-04-19 10:54:05] 2025-04-19 08:53:40,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 10:54:05] 2025-04-19 08:53:41,248 | INFO     | job 6606784026 has state=finished
[2025-04-19 10:54:05] 2025-04-19 08:53:41,248 | INFO     | preparing for final server update for job 6606784026 in state='finished'
[2025-04-19 10:54:05] 2025-04-19 08:53:41,249 | INFO     | this job has now completed (state=finished)
[2025-04-19 10:54:05] 2025-04-19 08:53:41,249 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 10:54:05] 2025-04-19 08:53:41,249 | INFO     | log transfer has been attempted: DONE
[2025-04-19 10:54:05] 2025-04-19 08:53:41,249 | INFO     | job 6606784026 has finished - writing final server update
[2025-04-19 10:54:05] 2025-04-19 08:53:41,249 | INFO     | total number of processed events: 400 (read)
[2025-04-19 10:54:05] 2025-04-19 08:53:41,251 | INFO     | executing command: lscpu
[2025-04-19 10:54:05] 2025-04-19 08:53:41,272 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 10:54:05] 2025-04-19 08:53:43,327 | INFO     | monitor loop #354: job 0:6606784026 is in state 'finished'
[2025-04-19 10:54:05] 2025-04-19 08:53:43,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 10:54:05] 2025-04-19 08:53:43,952 | INFO     | 4588s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 10:54:05] 2025-04-19 08:53:45,823 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 10:54:05] 2025-04-19 08:53:45,823 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6606784026/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 10:54:05] 2025-04-19 08:53:45,824 | INFO     | extracted standard info from prmon json
[2025-04-19 10:54:05] 2025-04-19 08:53:45,824 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 10:54:05] 2025-04-19 08:53:45,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 10:54:05] 2025-04-19 08:53:45,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 10:54:05] 2025-04-19 08:53:45,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 10:54:05] 2025-04-19 08:53:45,825 | INFO     | fitting pss+swap vs Time
[2025-04-19 10:54:05] 2025-04-19 08:53:45,825 | INFO     | sum of square deviations: 97479037.0
[2025-04-19 10:54:05] 2025-04-19 08:53:45,825 | INFO     | sum of deviations: 75740558.49999908
[2025-04-19 10:54:05] 2025-04-19 08:53:45,825 | INFO     | mean x: 1745050607.5
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | mean y: 2485517.220588235
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | -- intersect: -1353407110.471381
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | intersect: -1353407110.471381
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | chi2: 1.3177851363643986
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | -- intersect: -1353407110.471381
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | current memory leak: 0.78 B/s (using 68 data points, chi2=1.32)
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | ..............................
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | . Timing measurements:
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | . get job = 0 s
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | . initial setup = 1 s
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | . payload setup = 4 s
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | . stage-in = 0 s
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | . payload execution = 4559 s
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | . stage-out = 0 s
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | . log creation = 0 s
[2025-04-19 10:54:05] 2025-04-19 08:53:45,826 | INFO     | ..............................
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | 
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | job summary report
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | --------------------------------------------------
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | PanDA job id: 6606784026
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | task id: 44075483
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | errors: (none)
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | pilot state: finished 
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | transexitcode: 0
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | exeerrorcode: 0
[2025-04-19 10:54:05] 2025-04-19 08:53:46,112 | INFO     | exeerrordiag: 
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | exitcode: 0
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | exitmsg: OK
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | cpuconsumptiontime: 15619 s
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | nevents: 400
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | neventsw: 0
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | pid: 1316544
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | pgrp: 1316544
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | corecount: 4
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | event service: False
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | sizes: {0: 2426825, 4: 2427031, 11: 2427059, 4566: 2453236, 4567: 2453235, 4568: 2462422, 4575: 2462536}
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | --------------------------------------------------
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | 
[2025-04-19 10:54:05] 2025-04-19 08:53:46,113 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 10:54:05] 2025-04-19 08:53:46,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,133 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,133 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,133 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | job 6606784026 has completed (purged errors)
[2025-04-19 10:54:05] 2025-04-19 08:53:46,134 | INFO     | overall cleanup function is called
[2025-04-19 10:54:05] 2025-04-19 08:53:47,141 | INFO     | --- collectZombieJob: --- 10, [1316544]
[2025-04-19 10:54:05] 2025-04-19 08:53:47,141 | INFO     | zombie collector waiting for pid 1316544
[2025-04-19 10:54:05] 2025-04-19 08:53:47,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 10:54:05] 2025-04-19 08:53:47,141 | INFO     | collected zombie processes
[2025-04-19 10:54:05] 2025-04-19 08:53:47,141 | INFO     | will attempt to kill all subprocesses of pid=1316544
[2025-04-19 10:54:05] 2025-04-19 08:53:47,193 | INFO     | process IDs to be killed: [1316544] (in reverse order)
[2025-04-19 10:54:05] 2025-04-19 08:53:47,227 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 10:54:05] 2025-04-19 08:53:47,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 10:54:05] 2025-04-19 08:53:47,229 | INFO     | did not find any defunct processes belonging to 1316544
[2025-04-19 10:54:05] 2025-04-19 08:53:47,231 | INFO     | did not find any defunct processes belonging to 1316544
[2025-04-19 10:54:05] 2025-04-19 08:53:47,231 | INFO     | ready for new job
[2025-04-19 10:54:05] 2025-04-19 08:53:47,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 10:54:05] 2025-04-19 08:53:47,232 | INFO     | **************************************
[2025-04-19 10:54:05] 2025-04-19 08:53:47,232 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 10:54:05] 2025-04-19 08:53:47,232 | INFO     | **************************************
[2025-04-19 10:54:05] 2025-04-19 08:53:47,232 | INFO     | 
[2025-04-19 10:54:05] 2025-04-19 08:53:47,232 | INFO     | architecture information:
[2025-04-19 10:54:05] 2025-04-19 08:53:47,233 | INFO     | executing command: cat /etc/os-release
[2025-04-19 10:54:05] 2025-04-19 08:53:47,246 | INFO     | cat /etc/os-release:
[2025-04-19 10:54:05] NAME="CentOS Linux"
[2025-04-19 10:54:05] VERSION="7 (Core)"
[2025-04-19 10:54:05] ID="centos"
[2025-04-19 10:54:05] ID_LIKE="rhel fedora"
[2025-04-19 10:54:05] VERSION_ID="7"
[2025-04-19 10:54:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 10:54:05] ANSI_COLOR="0;31"
[2025-04-19 10:54:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 10:54:05] HOME_URL="https://www.centos.org/"
[2025-04-19 10:54:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 10:54:05] 
[2025-04-19 10:54:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 10:54:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 10:54:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 10:54:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 10:54:05] 
[2025-04-19 10:54:05] 2025-04-19 08:53:47,246 | INFO     | **************************************
[2025-04-19 10:54:05] 2025-04-19 08:53:47,749 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 10:54:05] 2025-04-19 08:53:47,766 | INFO     | sufficient remaining disk space (331827118080 B)
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | INFO     | update_server=False
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 10:54:05] 2025-04-19 08:53:47,767 | INFO     | all payload control threads have been joined
[2025-04-19 10:54:05] 2025-04-19 08:53:47,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 10:54:05] 2025-04-19 08:53:47,768 | INFO     | aborting loop
[2025-04-19 10:54:05] 2025-04-19 08:53:48,024 | INFO     | all data control threads have been joined
[2025-04-19 10:54:05] 2025-04-19 08:53:48,148 | INFO     | all job control threads have been joined
[2025-04-19 10:54:05] 2025-04-19 08:53:48,773 | INFO     | [job] retrieve thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:48,773 | INFO     | [job] queue monitor thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:48,773 | INFO     | [payload] control thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:48,773 | INFO     | [job] job monitor thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:48,801 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:48,906 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:48,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 10:54:05] 2025-04-19 08:53:49,030 | INFO     | [data] control thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:49,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 10:54:05] 2025-04-19 08:53:49,130 | INFO     | [payload] failed_post thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:49,154 | INFO     | [job] control thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:49,308 | INFO     | [data] copytool_in thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:49,661 | INFO     | [payload] validate_post thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:50,233 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:50,237 | INFO     | [job] validate thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:50,924 | INFO     | [data] copytool_out thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:53,053 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:53:58,141 | INFO     | job.realtimelogging is not enabled
[2025-04-19 10:54:05] 2025-04-19 08:53:59,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 10:54:05] 2025-04-19 08:54:00,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267926419264)>', '<ExcThread(monitor, started 140267273295616)>']
[2025-04-19 10:54:05] 2025-04-19 08:54:00,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 10:54:05] 2025-04-19 08:54:00,837 | INFO     | [monitor] control thread has ended
[2025-04-19 10:54:05] 2025-04-19 08:54:05,718 | INFO     | all workflow threads have been joined
[2025-04-19 10:54:05] 2025-04-19 08:54:05,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 10:54:05] 2025-04-19 08:54:05,718 | INFO     | traces error code: 0
[2025-04-19 10:54:05] 2025-04-19 08:54:05,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 10:54:05] 2025-04-19 08:54:05,788 [wrapper] ==== pilot stdout END ====
[2025-04-19 10:54:05] 2025-04-19 08:54:05,792 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 10:54:05] 2025-04-19 08:54:05,796 [wrapper] pilotpid: 1309945
[2025-04-19 10:54:05] 2025-04-19 08:54:05,800 [wrapper] Pilot exit status: 0
[2025-04-19 10:54:05] 2025-04-19 08:54:05,811 [wrapper] pandaids: 6606784026
[2025-04-19 10:54:05] 2025-04-19 08:54:05,834 [wrapper] cleanup supervisor_pilot 1329724 1309946
[2025-04-19 10:54:05] 2025-04-19 08:54:05,838 [wrapper] Test setup, not cleaning
[2025-04-19 10:54:05] 2025-04-19 08:54:05,842 [wrapper] apfmon messages muted
[2025-04-19 10:54:05] 2025-04-19 08:54:05,846 [wrapper] ==== wrapper stdout END ====
[2025-04-19 10:54:05] 2025-04-19 08:54:05,850 [wrapper] ==== wrapper stderr END ====
[2025-04-19 10:54:05]  *** Error codes and diagnostics ***
[2025-04-19 10:54:05]     "exeErrorCode": 0,
[2025-04-19 10:54:05]     "exeErrorDiag": "",
[2025-04-19 10:54:05]     "pilotErrorCode": 0,
[2025-04-19 10:54:05]     "pilotErrorDiag": "",
[2025-04-19 10:54:05]  *** Listing of results directory ***
[2025-04-19 10:54:05] total 416372
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc    495897 Apr 18 21:19 pilot3.tar.gz
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc      5111 Apr 18 21:22 queuedata.json
[2025-04-19 10:54:05] -rwx------ 1 boinc boinc     37140 Apr 18 21:23 runpilot2-wrapper.sh
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc       100 Apr 19 09:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 10:54:05] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 09:37 run_atlas
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc       105 Apr 19 09:37 job.xml
[2025-04-19 10:54:05] -rw-r--r-- 2 boinc boinc 226310178 Apr 19 09:37 EVNT.44075481._002845.pool.root.1
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc      6853 Apr 19 09:37 init_data.xml
[2025-04-19 10:54:05] drwxrwx--x 2 boinc boinc      4096 Apr 19 09:37 shared
[2025-04-19 10:54:05] -rw-r--r-- 2 boinc boinc    508889 Apr 19 09:37 input.tar.gz
[2025-04-19 10:54:05] -rw-r--r-- 2 boinc boinc     17569 Apr 19 09:37 start_atlas.sh
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc         0 Apr 19 09:37 boinc_lockfile
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc      2578 Apr 19 09:37 pandaJob.out
[2025-04-19 10:54:05] -rw------- 1 boinc boinc       424 Apr 19 09:37 setup.sh.local
[2025-04-19 10:54:05] -rw------- 1 boinc boinc    991300 Apr 19 09:37 agis_schedconf.cvmfs.json
[2025-04-19 10:54:05] -rw------- 1 boinc boinc   1618536 Apr 19 09:37 agis_ddmendpoints.agis.ALL.json
[2025-04-19 10:54:05] drwx------ 4 boinc boinc      4096 Apr 19 09:37 pilot3
[2025-04-19 10:54:05] -rw------- 1 boinc boinc 194832193 Apr 19 10:53 HITS.44075483._073240.pool.root.1
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc       529 Apr 19 10:53 boinc_task_state.xml
[2025-04-19 10:54:05] -rw------- 1 boinc boinc      1022 Apr 19 10:53 memory_monitor_summary.json
[2025-04-19 10:54:05] -rw------- 1 boinc boinc    228986 Apr 19 10:53 log.44075483._073240.job.log.tgz.1
[2025-04-19 10:54:05] -rw------- 1 boinc boinc        95 Apr 19 10:53 pilot_heartbeat.json
[2025-04-19 10:54:05] -rw------- 1 boinc boinc      7660 Apr 19 10:53 heartbeat.json
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc        27 Apr 19 10:54 wrapper_checkpoint.txt
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc      8192 Apr 19 10:54 boinc_mmap_file
[2025-04-19 10:54:05] -rw------- 1 boinc boinc      4552 Apr 19 10:54 pilotlog.txt
[2025-04-19 10:54:05] -rw------- 1 boinc boinc    450930 Apr 19 10:54 log.44075483._073240.job.log.1
[2025-04-19 10:54:05] -rw------- 1 boinc boinc       357 Apr 19 10:54 output.list
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc       620 Apr 19 10:54 runtime_log
[2025-04-19 10:54:05] -rw------- 1 boinc boinc    696320 Apr 19 10:54 result.tar.gz
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc     11099 Apr 19 10:54 runtime_log.err
[2025-04-19 10:54:05] -rw------- 1 boinc boinc       658 Apr 19 10:54 REgMDmvT6P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmT0fLDmC41i0m.diag
[2025-04-19 10:54:05] -rw-r--r-- 1 boinc boinc     21290 Apr 19 10:54 stderr.txt
[2025-04-19 10:54:05] HITS file was successfully produced:
[2025-04-19 10:54:05] -rw------- 1 boinc boinc 194832193 Apr 19 10:53 shared/HITS.pool.root.1
[2025-04-19 10:54:05]  *** Contents of shared directory: ***
[2025-04-19 10:54:05] total 412480
[2025-04-19 10:54:05] -rw-r--r-- 2 boinc boinc 226310178 Apr 19 09:37 ATLAS.root_0
[2025-04-19 10:54:05] -rw-r--r-- 2 boinc boinc    508889 Apr 19 09:37 input.tar.gz
[2025-04-19 10:54:05] -rw-r--r-- 2 boinc boinc     17569 Apr 19 09:37 start_atlas.sh
[2025-04-19 10:54:05] -rw------- 1 boinc boinc 194832193 Apr 19 10:53 HITS.pool.root.1
[2025-04-19 10:54:05] -rw------- 1 boinc boinc    696320 Apr 19 10:54 result.tar.gz
10:54:07 (1306207): run_atlas exited; CPU time 15636.156398
10:54:07 (1306207): called boinc_finish(0)

</stderr_txt>
]]>

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