Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:18:32 (3199004): wrapper (7.7.26015): starting
12:18:32 (3199004): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 12:18:32] Arguments: --nthreads 12
[2025-04-19 12:18:32] Threads: 12
[2025-04-19 12:18:32] Checking for CVMFS
[2025-04-19 12:18:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 12:18:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 12:18:33] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 12:18:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 12:18:33] 2.12.7.0 2094538 3968 56612 145038 0 63 2662296 4096000 90 130560 0 2928472 99.986 997444 1071 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-19 12:18:33] CVMFS is ok
[2025-04-19 12:18:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 12:18:33] Checking for apptainer binary...
[2025-04-19 12:18:33] apptainer is not installed, using version from CVMFS
[2025-04-19 12:18:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 12:18:33] gggg3250
[2025-04-19 12:18:33] apptainer works
[2025-04-19 12:18:33] Set ATHENA_PROC_NUMBER=12
[2025-04-19 12:18:33] Set ATHENA_CORE_NUMBER=12
[2025-04-19 12:18:33] Starting ATLAS job with PandaID=6606783989
[2025-04-19 12:18:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 16:51:27]  *** The last 200 lines of the pilot log: ***
[2025-04-19 16:51:27] 2025-04-19 16:51:12,591 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 16:51:27] 2025-04-19 16:51:12,591 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6606783989/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 16:51:27] 2025-04-19 16:51:12,591 | INFO     | extracted standard info from prmon json
[2025-04-19 16:51:27] 2025-04-19 16:51:12,591 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 16:51:27] 2025-04-19 16:51:12,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 16:51:27] 2025-04-19 16:51:12,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 16:51:27] 2025-04-19 16:51:12,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 16:51:27] 2025-04-19 16:51:12,597 | INFO     | fitting pss+swap vs Time
[2025-04-19 16:51:27] 2025-04-19 16:51:12,597 | INFO     | sum of square deviations: 5902093918.0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,598 | INFO     | sum of deviations: 69290613821.99998
[2025-04-19 16:51:27] 2025-04-19 16:51:12,598 | INFO     | mean x: 1745073248.0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,598 | INFO     | mean y: 2646044.232209738
[2025-04-19 16:51:27] 2025-04-19 16:51:12,598 | INFO     | -- intersect: -20484523119.49495
[2025-04-19 16:51:27] 2025-04-19 16:51:12,598 | INFO     | intersect: -20484523119.49495
[2025-04-19 16:51:27] 2025-04-19 16:51:12,598 | INFO     | chi2: 4.563999548588178
[2025-04-19 16:51:27] 2025-04-19 16:51:12,611 | INFO     | sum of square deviations: 5576683165.5
[2025-04-19 16:51:27] 2025-04-19 16:51:12,612 | INFO     | sum of deviations: 85595476482.49998
[2025-04-19 16:51:27] 2025-04-19 16:51:12,612 | INFO     | mean x: 1745073095.5
[2025-04-19 16:51:27] 2025-04-19 16:51:12,612 | INFO     | mean y: 2653557.6984732826
[2025-04-19 16:51:27] 2025-04-19 16:51:12,612 | INFO     | -- intersect: -26782150002.630974
[2025-04-19 16:51:27] 2025-04-19 16:51:12,612 | INFO     | intersect: -26782150002.630974
[2025-04-19 16:51:27] 2025-04-19 16:51:12,612 | INFO     | chi2: 3.880558269017935
[2025-04-19 16:51:27] 2025-04-19 16:51:12,612 | INFO     | current chi2=3.880558269017935 (change=14.974613215762872 %)
[2025-04-19 16:51:27] 2025-04-19 16:51:12,612 | INFO     | right removable region: 261
[2025-04-19 16:51:27] 2025-04-19 16:51:12,612 | INFO     | sum of square deviations: 5576683165.5
[2025-04-19 16:51:27] 2025-04-19 16:51:12,613 | INFO     | sum of deviations: 4245407148.5000076
[2025-04-19 16:51:27] 2025-04-19 16:51:12,613 | INFO     | mean x: 1745073400.5
[2025-04-19 16:51:27] 2025-04-19 16:51:12,613 | INFO     | mean y: 2676444.026717557
[2025-04-19 16:51:27] 2025-04-19 16:51:12,613 | INFO     | -- intersect: -1325809838.8183782
[2025-04-19 16:51:27] 2025-04-19 16:51:12,613 | INFO     | intersect: -1325809838.8183782
[2025-04-19 16:51:27] 2025-04-19 16:51:12,614 | INFO     | chi2: 2.3810353562581965
[2025-04-19 16:51:27] 2025-04-19 16:51:12,614 | INFO     | current chi2=2.3810353562581965 (change=47.830070294491094 %)
[2025-04-19 16:51:27] 2025-04-19 16:51:12,614 | INFO     | sum of square deviations: 5263458688.0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,627 | INFO     | sum of deviations: -51830828492.999985
[2025-04-19 16:51:27] 2025-04-19 16:51:12,627 | INFO     | mean x: 1745073553.0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,627 | INFO     | mean y: 2703761.6420233464
[2025-04-19 16:51:27] 2025-04-19 16:51:12,627 | INFO     | -- intersect: 17186957195.49611
[2025-04-19 16:51:27] 2025-04-19 16:51:12,627 | INFO     | intersect: 17186957195.49611
[2025-04-19 16:51:27] 2025-04-19 16:51:12,627 | INFO     | chi2: 0.9136946930766885
[2025-04-19 16:51:27] 2025-04-19 16:51:12,627 | INFO     | current chi2=0.9136946930766885 (change=61.62616020483785 %)
[2025-04-19 16:51:27] 2025-04-19 16:51:12,628 | INFO     | sum of square deviations: 4962187923.0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,628 | INFO     | sum of deviations: -57565319299.0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,628 | INFO     | mean x: 1745073705.5
[2025-04-19 16:51:27] 2025-04-19 16:51:12,629 | INFO     | mean y: 2706603.6428571427
[2025-04-19 16:51:27] 2025-04-19 16:51:12,629 | INFO     | -- intersect: 20246946970.23177
[2025-04-19 16:51:27] 2025-04-19 16:51:12,629 | INFO     | intersect: 20246946970.23177
[2025-04-19 16:51:27] 2025-04-19 16:51:12,629 | INFO     | chi2: 0.822962673891752
[2025-04-19 16:51:27] 2025-04-19 16:51:12,629 | INFO     | current chi2=0.822962673891752 (change=9.930233793896088 %)
[2025-04-19 16:51:27] 2025-04-19 16:51:12,629 | INFO     | left removable region: 30
[2025-04-19 16:51:27] 2025-04-19 16:51:12,629 | INFO     | sum of square deviations: 3822136780.0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,630 | INFO     | sum of deviations: -24357527834.999996
[2025-04-19 16:51:27] 2025-04-19 16:51:12,630 | INFO     | mean x: 1745073980.0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,630 | INFO     | mean y: 2707022.3982683984
[2025-04-19 16:51:27] 2025-04-19 16:51:12,630 | INFO     | -- intersect: 11123629817.31306
[2025-04-19 16:51:27] 2025-04-19 16:51:12,630 | INFO     | intersect: 11123629817.31306
[2025-04-19 16:51:27] 2025-04-19 16:51:12,630 | INFO     | chi2: 0.08985798607554533
[2025-04-19 16:51:27] 2025-04-19 16:51:12,630 | INFO     | -- intersect: 11123629817.31306
[2025-04-19 16:51:27] 2025-04-19 16:51:12,630 | INFO     | current memory leak: -6.37 B/s (using 231 data points, chi2=0.09)
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | ..............................
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | . Timing measurements:
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | . get job = 0 s
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | . initial setup = 1 s
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | . payload setup = 2 s
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | . stage-in = 0 s
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | . payload execution = 16256 s
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | . stage-out = 3 s
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | . log creation = 0 s
[2025-04-19 16:51:27] 2025-04-19 16:51:12,647 | INFO     | ..............................
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | 
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | job summary report
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | --------------------------------------------------
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | PanDA job id: 6606783989
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | task id: 44075483
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | errors: (none)
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | pilot state: finished 
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | transexitcode: 0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | exeerrorcode: 0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | exeerrordiag: 
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | exitcode: 0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | exitmsg: OK
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | cpuconsumptiontime: 24182 s
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | nevents: 400
[2025-04-19 16:51:27] 2025-04-19 16:51:12,855 | INFO     | neventsw: 0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,856 | INFO     | pid: 3208958
[2025-04-19 16:51:27] 2025-04-19 16:51:12,856 | INFO     | pgrp: 3208958
[2025-04-19 16:51:27] 2025-04-19 16:51:12,856 | INFO     | corecount: 12
[2025-04-19 16:51:27] 2025-04-19 16:51:12,856 | INFO     | event service: False
[2025-04-19 16:51:27] 2025-04-19 16:51:12,856 | INFO     | sizes: {0: 2426732, 1: 2426874, 2: 2427080, 11: 2427108, 16261: 2458155, 16262: 2458154, 16266: 2467409, 16342: 2467523}
[2025-04-19 16:51:27] 2025-04-19 16:51:12,856 | INFO     | --------------------------------------------------
[2025-04-19 16:51:27] 2025-04-19 16:51:12,856 | INFO     | 
[2025-04-19 16:51:27] 2025-04-19 16:51:12,856 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 16:51:27] 2025-04-19 16:51:12,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 16:51:27] 2025-04-19 16:51:12,916 | INFO     | job 6606783989 has completed (purged errors)
[2025-04-19 16:51:27] 2025-04-19 16:51:12,916 | INFO     | overall cleanup function is called
[2025-04-19 16:51:27] 2025-04-19 16:51:13,923 | INFO     | --- collectZombieJob: --- 10, [3208958]
[2025-04-19 16:51:27] 2025-04-19 16:51:13,923 | INFO     | zombie collector waiting for pid 3208958
[2025-04-19 16:51:27] 2025-04-19 16:51:13,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 16:51:27] 2025-04-19 16:51:13,923 | INFO     | collected zombie processes
[2025-04-19 16:51:27] 2025-04-19 16:51:13,923 | INFO     | will attempt to kill all subprocesses of pid=3208958
[2025-04-19 16:51:27] 2025-04-19 16:51:14,037 | INFO     | process IDs to be killed: [3208958] (in reverse order)
[2025-04-19 16:51:27] 2025-04-19 16:51:14,143 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 16:51:27] 2025-04-19 16:51:14,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 16:51:27] 2025-04-19 16:51:14,144 | INFO     | did not find any defunct processes belonging to 3208958
[2025-04-19 16:51:27] 2025-04-19 16:51:14,145 | INFO     | did not find any defunct processes belonging to 3208958
[2025-04-19 16:51:27] 2025-04-19 16:51:14,145 | INFO     | ready for new job
[2025-04-19 16:51:27] 2025-04-19 16:51:14,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 16:51:27] 2025-04-19 16:51:14,146 | INFO     | **************************************
[2025-04-19 16:51:27] 2025-04-19 16:51:14,146 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 16:51:27] 2025-04-19 16:51:14,146 | INFO     | **************************************
[2025-04-19 16:51:27] 2025-04-19 16:51:14,146 | INFO     | 
[2025-04-19 16:51:27] 2025-04-19 16:51:14,163 | INFO     | architecture information:
[2025-04-19 16:51:27] 2025-04-19 16:51:14,167 | INFO     | executing command: cat /etc/os-release
[2025-04-19 16:51:27] 2025-04-19 16:51:14,231 | INFO     | cat /etc/os-release:
[2025-04-19 16:51:27] NAME="CentOS Linux"
[2025-04-19 16:51:27] VERSION="7 (Core)"
[2025-04-19 16:51:27] ID="centos"
[2025-04-19 16:51:27] ID_LIKE="rhel fedora"
[2025-04-19 16:51:27] VERSION_ID="7"
[2025-04-19 16:51:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 16:51:27] ANSI_COLOR="0;31"
[2025-04-19 16:51:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 16:51:27] HOME_URL="https://www.centos.org/"
[2025-04-19 16:51:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 16:51:27] 
[2025-04-19 16:51:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 16:51:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 16:51:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 16:51:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 16:51:27] 
[2025-04-19 16:51:27] 2025-04-19 16:51:14,231 | INFO     | **************************************
[2025-04-19 16:51:27] 2025-04-19 16:51:14,732 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-04-19 16:51:27] 2025-04-19 16:51:14,779 | INFO     | sufficient remaining disk space (98896445440 B)
[2025-04-19 16:51:27] 2025-04-19 16:51:14,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 16:51:27] 2025-04-19 16:51:14,779 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 16:51:27] 2025-04-19 16:51:14,779 | INFO     | update_server=False
[2025-04-19 16:51:27] 2025-04-19 16:51:14,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 16:51:27] 2025-04-19 16:51:14,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 16:51:27] 2025-04-19 16:51:14,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 16:51:27] 2025-04-19 16:51:14,779 | INFO     | aborting loop
[2025-04-19 16:51:27] 2025-04-19 16:51:14,783 | INFO     | all data control threads have been joined
[2025-04-19 16:51:27] 2025-04-19 16:51:14,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 16:51:27] 2025-04-19 16:51:14,939 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 16:51:27] 2025-04-19 16:51:14,983 | INFO     | all job control threads have been joined
[2025-04-19 16:51:27] 2025-04-19 16:51:15,159 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 16:51:27] 2025-04-19 16:51:15,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 16:51:27] 2025-04-19 16:51:15,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 16:51:27] 2025-04-19 16:51:15,783 | INFO     | [job] retrieve thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:15,783 | INFO     | [job] queue monitor thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:15,783 | INFO     | [job] job monitor thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:15,787 | INFO     | [data] control thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:15,947 | INFO     | all payload control threads have been joined
[2025-04-19 16:51:27] 2025-04-19 16:51:15,975 | INFO     | [payload] validate_post thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:15,987 | INFO     | [job] control thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:16,071 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:16,207 | INFO     | [payload] failed_post thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:16,423 | INFO     | [data] copytool_in thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:16,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:16,819 | INFO     | [job] validate thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:16,869 | INFO     | [data] copytool_out thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:16,871 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:16,871 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:16,951 | INFO     | [payload] control thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:18,955 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 16:51:27] 2025-04-19 16:51:21,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052461954880)>', '<ExcThread(monitor, started 140051895805696)>']
[2025-04-19 16:51:27] 2025-04-19 16:51:21,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 16:51:27] 2025-04-19 16:51:21,191 | INFO     | [monitor] control thread has ended
[2025-04-19 16:51:27] 2025-04-19 16:51:26,067 | INFO     | all workflow threads have been joined
[2025-04-19 16:51:27] 2025-04-19 16:51:26,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 16:51:27] 2025-04-19 16:51:26,067 | INFO     | traces error code: 0
[2025-04-19 16:51:27] 2025-04-19 16:51:26,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 16:51:27] 2025-04-19 16:51:26,399 [wrapper] ==== pilot stdout END ====
[2025-04-19 16:51:27] 2025-04-19 16:51:26,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 16:51:27] 2025-04-19 16:51:26,545 [wrapper] pilotpid: 3202597
[2025-04-19 16:51:27] 2025-04-19 16:51:26,599 [wrapper] Pilot exit status: 0
[2025-04-19 16:51:27] 2025-04-19 16:51:26,759 [wrapper] pandaids: 6606783989
[2025-04-19 16:51:27] 2025-04-19 16:51:26,823 [wrapper] cleanup supervisor_pilot 3286535 3202598
[2025-04-19 16:51:27] 2025-04-19 16:51:26,843 [wrapper] Test setup, not cleaning
[2025-04-19 16:51:27] 2025-04-19 16:51:26,871 [wrapper] apfmon messages muted
[2025-04-19 16:51:27] 2025-04-19 16:51:26,915 [wrapper] ==== wrapper stdout END ====
[2025-04-19 16:51:27] 2025-04-19 16:51:26,943 [wrapper] ==== wrapper stderr END ====
[2025-04-19 16:51:27]  *** Error codes and diagnostics ***
[2025-04-19 16:51:27]     "exeErrorCode": 0,
[2025-04-19 16:51:27]     "exeErrorDiag": "",
[2025-04-19 16:51:27]     "pilotErrorCode": 0,
[2025-04-19 16:51:27]     "pilotErrorDiag": "",
[2025-04-19 16:51:27]  *** Listing of results directory ***
[2025-04-19 16:51:27] total 418392
[2025-04-19 16:51:27] -rw-r--r-- 1 boinc boinc    495897 Apr 18 19:11 pilot3.tar.gz
[2025-04-19 16:51:27] -rwx------ 1 boinc boinc     37140 Apr 18 19:18 runpilot2-wrapper.sh
[2025-04-19 16:51:27] -rw-r--r-- 1 boinc boinc      5111 Apr 18 19:18 queuedata.json
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc       100 Apr 19 12:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 16:51:27] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 12:18 run_atlas
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc       105 Apr 19 12:18 job.xml
[2025-04-19 16:51:27] -rw-r--r-- 2 boinc boinc     17569 Apr 19 12:18 start_atlas.sh
[2025-04-19 16:51:27] drwxrwx--x 2 boinc boinc      4096 Apr 19 12:18 shared
[2025-04-19 16:51:27] -rw-r--r-- 2 boinc boinc    508894 Apr 19 12:18 input.tar.gz
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc      9342 Apr 19 12:18 init_data.xml
[2025-04-19 16:51:27] -rw-r--r-- 2 boinc boinc 225418358 Apr 19 12:18 EVNT.44075481._002843.pool.root.1
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc         0 Apr 19 12:18 boinc_lockfile
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc      2578 Apr 19 12:18 pandaJob.out
[2025-04-19 16:51:27] -rw------- 1 boinc boinc       424 Apr 19 12:18 setup.sh.local
[2025-04-19 16:51:27] -rw------- 1 boinc boinc    991292 Apr 19 12:18 agis_schedconf.cvmfs.json
[2025-04-19 16:51:27] drwx------ 4 boinc boinc      4096 Apr 19 12:18 pilot3
[2025-04-19 16:51:27] -rw------- 1 boinc boinc 195146510 Apr 19 16:48 HITS.44075483._073203.pool.root.1
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc       530 Apr 19 16:48 boinc_task_state.xml
[2025-04-19 16:51:27] -rw------- 1 boinc boinc      1021 Apr 19 16:49 memory_monitor_summary.json
[2025-04-19 16:51:27] -rw------- 1 boinc boinc   1618536 Apr 19 16:49 agis_ddmendpoints.agis.ALL.json
[2025-04-19 16:51:27] -rw------- 1 boinc boinc    468871 Apr 19 16:49 log.44075483._073203.job.log.tgz.1
[2025-04-19 16:51:27] -rw------- 1 boinc boinc        95 Apr 19 16:50 pilot_heartbeat.json
[2025-04-19 16:51:27] -rw------- 1 boinc boinc      7666 Apr 19 16:51 heartbeat.json
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc        28 Apr 19 16:51 wrapper_checkpoint.txt
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc      8192 Apr 19 16:51 boinc_mmap_file
[2025-04-19 16:51:27] -rw------- 1 boinc boinc      4376 Apr 19 16:51 pilotlog.txt
[2025-04-19 16:51:27] -rw------- 1 boinc boinc   1527050 Apr 19 16:51 log.44075483._073203.job.log.1
[2025-04-19 16:51:27] -rw------- 1 boinc boinc       357 Apr 19 16:51 output.list
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc       620 Apr 19 16:51 runtime_log
[2025-04-19 16:51:27] -rw------- 1 boinc boinc   2017280 Apr 19 16:51 result.tar.gz
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc     11418 Apr 19 16:51 runtime_log.err
[2025-04-19 16:51:27] -rw------- 1 boinc boinc       655 Apr 19 16:51 DZdLDmNP6P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6zfLDmIjZ3Dm.diag
[2025-04-19 16:51:27] -rw-rw-r-- 1 boinc boinc     20616 Apr 19 16:51 stderr.txt
[2025-04-19 16:51:27] HITS file was successfully produced:
[2025-04-19 16:51:27] -rw------- 1 boinc boinc 195146510 Apr 19 16:48 shared/HITS.pool.root.1
[2025-04-19 16:51:27]  *** Contents of shared directory: ***
[2025-04-19 16:51:27] total 413212
[2025-04-19 16:51:27] -rw-r--r-- 2 boinc boinc     17569 Apr 19 12:18 start_atlas.sh
[2025-04-19 16:51:27] -rw-r--r-- 2 boinc boinc    508894 Apr 19 12:18 input.tar.gz
[2025-04-19 16:51:27] -rw-r--r-- 2 boinc boinc 225418358 Apr 19 12:18 ATLAS.root_0
[2025-04-19 16:51:27] -rw------- 1 boinc boinc 195146510 Apr 19 16:48 HITS.pool.root.1
[2025-04-19 16:51:27] -rw------- 1 boinc boinc   2017280 Apr 19 16:51 result.tar.gz
16:51:28 (3199004): run_atlas exited; CPU time 24240.072309
16:51:28 (3199004): called boinc_finish(0)

</stderr_txt>
]]>

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