Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:15:43 (1669444): wrapper (7.7.26015): starting
04:15:43 (1669444): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 04:15:43] Arguments: --nthreads 12
[2025-04-19 04:15:43] Threads: 12
[2025-04-19 04:15:43] Checking for CVMFS
[2025-04-19 04:15:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 04:15:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 04:15:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 04:15:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 04:15:44] 2.12.7.0 2534634 19870 260716 145022 1 60 30611518 46080001 6454 130560 0 195193252 99.934 37011783 4466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-19 04:15:44] CVMFS is ok
[2025-04-19 04:15:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 04:15:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 04:15:44] Further information can be found at the LHC@home message board.
[2025-04-19 04:15:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 04:15:44] Checking for apptainer binary...
[2025-04-19 04:15:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 04:15:44] Running /usr/bin/apptainer --version
[2025-04-19 04:15:44] apptainer version 1.4.0-1.el9
[2025-04-19 04:15:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 04:15:44] mff2103.farm.particle.cz
[2025-04-19 04:15:44] apptainer works
[2025-04-19 04:15:44] Set ATHENA_PROC_NUMBER=12
[2025-04-19 04:15:44] Set ATHENA_CORE_NUMBER=12
[2025-04-19 04:15:44] Starting ATLAS job with PandaID=6606652312
[2025-04-19 04:15:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 05:09:37]  *** The last 200 lines of the pilot log: ***
[2025-04-19 05:09:37]  status=None
[2025-04-19 05:09:37]  status_code=0
[2025-04-19 05:09:37]  storage_token=
[2025-04-19 05:09:37]  surl=/scratch/.boinc/slots/6/PanDA_Pilot-6606652312/log.44075483._071176.job.log.tgz.1
[2025-04-19 05:09:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/9c/log.44075483._071176.job.log.tgz.1
[2025-04-19 05:09:37]  workdir=None
[2025-04-19 05:09:37] ]
[2025-04-19 05:09:37] 2025-04-19 03:09:14,321 | INFO     | transferring file log.44075483._071176.job.log.tgz.1 from /scratch/.boinc/slots/6/PanDA_Pilot-6606652312/log.44075483._071176.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-19 05:09:37] 2025-04-19 03:09:14,321 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/6/PanDA_Pilot-6606652312/log.44075483._071176.job.log.tgz.1 /scratch/.boinc/slots/6/log.44075483._071176.j
[2025-04-19 05:09:37] 2025-04-19 03:09:14,346 | INFO     | adding to output.list: log.44075483._071176.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/9c/log.44075483._071176.job.log.tg
[2025-04-19 05:09:37] 2025-04-19 03:09:14,347 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 05:09:37] 2025-04-19 03:09:14,347 | INFO     | summary of transferred files:
[2025-04-19 05:09:37] 2025-04-19 03:09:14,347 | INFO     |  -- lfn=log.44075483._071176.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 05:09:37] 2025-04-19 03:09:14,347 | INFO     | stage-out finished correctly
[2025-04-19 05:09:37] 2025-04-19 03:09:15,791 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 05:09:37] 2025-04-19 03:09:15,888 | INFO     | job 6606652312 has state=finished
[2025-04-19 05:09:37] 2025-04-19 03:09:15,889 | INFO     | preparing for final server update for job 6606652312 in state='finished'
[2025-04-19 05:09:37] 2025-04-19 03:09:15,890 | INFO     | this job has now completed (state=finished)
[2025-04-19 05:09:37] 2025-04-19 03:09:15,890 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 05:09:37] 2025-04-19 03:09:15,890 | INFO     | log transfer has been attempted: DONE
[2025-04-19 05:09:37] 2025-04-19 03:09:15,890 | INFO     | job 6606652312 has finished - writing final server update
[2025-04-19 05:09:37] 2025-04-19 03:09:15,890 | INFO     | total number of processed events: 400 (read)
[2025-04-19 05:09:37] 2025-04-19 03:09:15,897 | INFO     | executing command: lscpu
[2025-04-19 05:09:37] 2025-04-19 03:09:15,985 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 05:09:37] 2025-04-19 03:09:18,438 | WARNING  | process 1682771 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 05:09:37] 2025-04-19 03:09:18,439 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6606652312/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:09:37] 2025-04-19 03:09:18,440 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6606652312/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:09:37] 2025-04-19 03:09:18,441 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4481317 B
[2025-04-19 05:09:37] 2025-04-19 03:09:18,441 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16032 B
[2025-04-19 05:09:37] 2025-04-19 03:09:18,441 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-04-19 05:09:37] 2025-04-19 03:09:21,406 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 05:09:37] 2025-04-19 03:09:21,406 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6606652312/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,415 | INFO     | extracted standard info from prmon json
[2025-04-19 05:09:37] 2025-04-19 03:09:21,416 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 05:09:37] 2025-04-19 03:09:21,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 05:09:37] 2025-04-19 03:09:21,417 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 05:09:37] 2025-04-19 03:09:21,417 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 05:09:37] 2025-04-19 03:09:21,420 | INFO     | fitting pss+swap vs Time
[2025-04-19 05:09:37] 2025-04-19 03:09:21,420 | INFO     | sum of square deviations: 28242390.0
[2025-04-19 05:09:37] 2025-04-19 03:09:21,420 | INFO     | sum of deviations: 10330123690.000004
[2025-04-19 05:09:37] 2025-04-19 03:09:21,421 | INFO     | mean x: 1745030634.0
[2025-04-19 05:09:37] 2025-04-19 03:09:21,421 | INFO     | mean y: 2528416.1333333333
[2025-04-19 05:09:37] 2025-04-19 03:09:21,421 | INFO     | -- intersect: -638271438201.3918
[2025-04-19 05:09:37] 2025-04-19 03:09:21,421 | INFO     | intersect: -638271438201.3918
[2025-04-19 05:09:37] 2025-04-19 03:09:21,421 | INFO     | chi2: 1.1870874577835424
[2025-04-19 05:09:37] 2025-04-19 03:09:21,421 | INFO     | -- intersect: -638271438201.3918
[2025-04-19 05:09:37] 2025-04-19 03:09:21,421 | INFO     | current memory leak: 365.77 B/s (using 45 data points, chi2=1.19)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,422 | INFO     | ..............................
[2025-04-19 05:09:37] 2025-04-19 03:09:21,422 | INFO     | . Timing measurements:
[2025-04-19 05:09:37] 2025-04-19 03:09:21,422 | INFO     | . get job = 0 s
[2025-04-19 05:09:37] 2025-04-19 03:09:21,422 | INFO     | . initial setup = 1 s
[2025-04-19 05:09:37] 2025-04-19 03:09:21,422 | INFO     | . payload setup = 7 s
[2025-04-19 05:09:37] 2025-04-19 03:09:21,422 | INFO     | . stage-in = 0 s
[2025-04-19 05:09:37] 2025-04-19 03:09:21,423 | INFO     | . payload execution = 3167 s
[2025-04-19 05:09:37] 2025-04-19 03:09:21,423 | INFO     | . stage-out = 0 s
[2025-04-19 05:09:37] 2025-04-19 03:09:21,423 | INFO     | . log creation = 0 s
[2025-04-19 05:09:37] 2025-04-19 03:09:21,423 | INFO     | ..............................
[2025-04-19 05:09:37] 2025-04-19 03:09:21,450 | INFO     | sufficient remaining disk space (1680998400000 B)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,466 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,525 | INFO     | size of work directory /scratch/.boinc/slots/6/PanDA_Pilot-6606652312: 4768767 B (within 2537553920 B limit)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,525 | INFO     | pfn file=/scratch/.boinc/slots/6/PanDA_Pilot-6606652312/HITS.44075483._071176.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,525 | INFO     | total size of present files: 0 B (workdir size: 4768767 B)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,525 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/6/PanDA_Pilot-6606652312/HITS.44075483._071176.pool.root.1 since it does not exist
[2025-04-19 05:09:37] 2025-04-19 03:09:21,879 | INFO     | number of running child processes to parent process 1682771: 1
[2025-04-19 05:09:37] 2025-04-19 03:09:21,880 | INFO     | maximum number of monitored processes: 6
[2025-04-19 05:09:37] 2025-04-19 03:09:21,880 | INFO     | aborting job monitoring since job object (job id=6606652312) has expired
[2025-04-19 05:09:37] 2025-04-19 03:09:21,916 | INFO     | 
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | job summary report
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | --------------------------------------------------
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | PanDA job id: 6606652312
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | task id: 44075483
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | errors: (none)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | pilot state: finished 
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | transexitcode: 0
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | exeerrorcode: 0
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | exeerrordiag: 
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | exitcode: 0
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | exitmsg: OK
[2025-04-19 05:09:37] 2025-04-19 03:09:21,917 | INFO     | cpuconsumptiontime: 27454 s
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | nevents: 400
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | neventsw: 0
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | pid: 1682771
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | pgrp: 1682771
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | corecount: 12
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | event service: False
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | sizes: {0: 2426824, 6: 2427030, 11: 2427058, 3178: 2452351, 3181: 2461294, 3182: 2461350, 3188: 2461648}
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | --------------------------------------------------
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | 
[2025-04-19 05:09:37] 2025-04-19 03:09:21,918 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-04-19 05:09:37] 2025-04-19 03:09:21,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | job 6606652312 has completed (purged errors)
[2025-04-19 05:09:37] 2025-04-19 03:09:21,948 | INFO     | overall cleanup function is called
[2025-04-19 05:09:37] 2025-04-19 03:09:22,954 | INFO     | --- collectZombieJob: --- 10, [1682771]
[2025-04-19 05:09:37] 2025-04-19 03:09:22,955 | INFO     | zombie collector waiting for pid 1682771
[2025-04-19 05:09:37] 2025-04-19 03:09:22,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 05:09:37] 2025-04-19 03:09:22,955 | INFO     | collected zombie processes
[2025-04-19 05:09:37] 2025-04-19 03:09:22,955 | INFO     | will attempt to kill all subprocesses of pid=1682771
[2025-04-19 05:09:37] 2025-04-19 03:09:23,303 | INFO     | process IDs to be killed: [1682771] (in reverse order)
[2025-04-19 05:09:37] 2025-04-19 03:09:23,413 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 05:09:37] 2025-04-19 03:09:23,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 05:09:37] 2025-04-19 03:09:23,425 | INFO     | did not find any defunct processes belonging to 1682771
[2025-04-19 05:09:37] 2025-04-19 03:09:23,435 | INFO     | did not find any defunct processes belonging to 1682771
[2025-04-19 05:09:37] 2025-04-19 03:09:23,435 | INFO     | ready for new job
[2025-04-19 05:09:37] 2025-04-19 03:09:23,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 05:09:37] 2025-04-19 03:09:23,437 | INFO     | **************************************
[2025-04-19 05:09:37] 2025-04-19 03:09:23,437 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 05:09:37] 2025-04-19 03:09:23,437 | INFO     | **************************************
[2025-04-19 05:09:37] 2025-04-19 03:09:23,438 | INFO     | 
[2025-04-19 05:09:37] 2025-04-19 03:09:23,444 | INFO     | architecture information:
[2025-04-19 05:09:37] 2025-04-19 03:09:23,444 | INFO     | executing command: cat /etc/os-release
[2025-04-19 05:09:37] 2025-04-19 03:09:23,462 | INFO     | cat /etc/os-release:
[2025-04-19 05:09:37] NAME="CentOS Linux"
[2025-04-19 05:09:37] VERSION="7 (Core)"
[2025-04-19 05:09:37] ID="centos"
[2025-04-19 05:09:37] ID_LIKE="rhel fedora"
[2025-04-19 05:09:37] VERSION_ID="7"
[2025-04-19 05:09:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 05:09:37] ANSI_COLOR="0;31"
[2025-04-19 05:09:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 05:09:37] HOME_URL="https://www.centos.org/"
[2025-04-19 05:09:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 05:09:37] 
[2025-04-19 05:09:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 05:09:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 05:09:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 05:09:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 05:09:37] 
[2025-04-19 05:09:37] 2025-04-19 03:09:23,463 | INFO     | **************************************
[2025-04-19 05:09:37] 2025-04-19 03:09:23,966 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-04-19 05:09:37] 2025-04-19 03:09:23,991 | INFO     | sufficient remaining disk space (1681003642880 B)
[2025-04-19 05:09:37] 2025-04-19 03:09:23,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 05:09:37] 2025-04-19 03:09:23,992 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 05:09:37] 2025-04-19 03:09:23,992 | INFO     | update_server=False
[2025-04-19 05:09:37] 2025-04-19 03:09:23,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 05:09:37] 2025-04-19 03:09:24,081 | INFO     | all payload control threads have been joined
[2025-04-19 05:09:37] 2025-04-19 03:09:24,179 | INFO     | all job control threads have been joined
[2025-04-19 05:09:37] 2025-04-19 03:09:24,382 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 05:09:37] 2025-04-19 03:09:24,383 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 05:09:37] 2025-04-19 03:09:24,383 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:09:37] 2025-04-19 03:09:24,383 | INFO     | will abort loop
[2025-04-19 05:09:37] 2025-04-19 03:09:24,796 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 05:09:37] 2025-04-19 03:09:24,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 05:09:37] 2025-04-19 03:09:24,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 05:09:37] 2025-04-19 03:09:24,876 | INFO     | all data control threads have been joined
[2025-04-19 05:09:37] 2025-04-19 03:09:24,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 05:09:37] 2025-04-19 03:09:24,998 | INFO     | [job] retrieve thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:25,087 | INFO     | [payload] control thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:25,184 | INFO     | [job] control thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:25,208 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:25,388 | INFO     | [job] job monitor thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:25,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:25,881 | INFO     | [data] control thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:25,909 | INFO     | [job] validate thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:26,093 | INFO     | [data] copytool_in thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:26,118 | INFO     | [payload] validate_post thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:26,246 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:26,391 | INFO     | [payload] failed_post thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:26,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 05:09:37] 2025-04-19 03:09:26,414 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:26,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:09:37] 2025-04-19 03:09:26,946 | INFO     | [data] copytool_out thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:27,540 | INFO     | [job] queue monitor thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:30,399 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 05:09:37] 2025-04-19 03:09:31,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546477152064)>', '<ExcThread(monitor, started 140545557001984)>']
[2025-04-19 05:09:37] 2025-04-19 03:09:31,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 05:09:37] 2025-04-19 03:09:31,834 | INFO     | [monitor] control thread has ended
[2025-04-19 05:09:37] 2025-04-19 03:09:36,809 | INFO     | all workflow threads have been joined
[2025-04-19 05:09:37] 2025-04-19 03:09:36,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 05:09:37] 2025-04-19 03:09:36,810 | INFO     | traces error code: 0
[2025-04-19 05:09:37] 2025-04-19 03:09:36,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 05:09:37] 2025-04-19 03:09:36,939 [wrapper] ==== pilot stdout END ====
[2025-04-19 05:09:37] 2025-04-19 03:09:36,943 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 05:09:37] 2025-04-19 03:09:36,946 [wrapper] pilotpid: 1673450
[2025-04-19 05:09:37] 2025-04-19 03:09:36,949 [wrapper] Pilot exit status: 0
[2025-04-19 05:09:37] 2025-04-19 03:09:36,965 [wrapper] pandaids: 6606652312
[2025-04-19 05:09:37] 2025-04-19 03:09:37,044 [wrapper] cleanup supervisor_pilot 1896233 1673451
[2025-04-19 05:09:37] 2025-04-19 03:09:37,048 [wrapper] Test setup, not cleaning
[2025-04-19 05:09:37] 2025-04-19 03:09:37,052 [wrapper] apfmon messages muted
[2025-04-19 05:09:37] 2025-04-19 03:09:37,055 [wrapper] ==== wrapper stdout END ====
[2025-04-19 05:09:37] 2025-04-19 03:09:37,058 [wrapper] ==== wrapper stderr END ====
[2025-04-19 05:09:37]  *** Error codes and diagnostics ***
[2025-04-19 05:09:37]     "exeErrorCode": 0,
[2025-04-19 05:09:37]     "exeErrorDiag": "",
[2025-04-19 05:09:37]     "pilotErrorCode": 0,
[2025-04-19 05:09:37]     "pilotErrorDiag": "",
[2025-04-19 05:09:37]  *** Listing of results directory ***
[2025-04-19 05:09:37] total 405948
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc    495897 Apr 18 17:45 pilot3.tar.gz
[2025-04-19 05:09:37] -rwx------ 1 boinc boinc     37140 Apr 18 17:59 runpilot2-wrapper.sh
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc      5111 Apr 18 17:59 queuedata.json
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc       100 Apr 19 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 05:09:37] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 04:15 run_atlas
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc       105 Apr 19 04:15 job.xml
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc      6654 Apr 19 04:15 init_data.xml
[2025-04-19 05:09:37] -rw-r--r-- 2 boinc boinc 221829122 Apr 19 04:15 EVNT.44075481._002764.pool.root.1
[2025-04-19 05:09:37] -rw-r--r-- 2 boinc boinc     17569 Apr 19 04:15 start_atlas.sh
[2025-04-19 05:09:37] drwxrwx--x 2 boinc boinc      4096 Apr 19 04:15 shared
[2025-04-19 05:09:37] -rw-r--r-- 2 boinc boinc    508895 Apr 19 04:15 input.tar.gz
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc         0 Apr 19 04:15 boinc_lockfile
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc      2578 Apr 19 04:15 pandaJob.out
[2025-04-19 05:09:37] -rw------- 1 boinc boinc       424 Apr 19 04:15 setup.sh.local
[2025-04-19 05:09:37] -rw------- 1 boinc boinc    991292 Apr 19 04:15 agis_schedconf.cvmfs.json
[2025-04-19 05:09:37] -rw------- 1 boinc boinc   1618536 Apr 19 04:15 agis_ddmendpoints.agis.ALL.json
[2025-04-19 05:09:37] drwx------ 4 boinc boinc      4096 Apr 19 04:15 pilot3
[2025-04-19 05:09:37] -rw------- 1 boinc boinc 188619221 Apr 19 05:08 HITS.44075483._071176.pool.root.1
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc       529 Apr 19 05:08 boinc_task_state.xml
[2025-04-19 05:09:37] -rw------- 1 boinc boinc        95 Apr 19 05:09 pilot_heartbeat.json
[2025-04-19 05:09:37] -rw------- 1 boinc boinc      1023 Apr 19 05:09 memory_monitor_summary.json
[2025-04-19 05:09:37] -rw------- 1 boinc boinc    359349 Apr 19 05:09 log.44075483._071176.job.log.tgz.1
[2025-04-19 05:09:37] -rw------- 1 boinc boinc      7697 Apr 19 05:09 heartbeat.json
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc      8192 Apr 19 05:09 boinc_mmap_file
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc        27 Apr 19 05:09 wrapper_checkpoint.txt
[2025-04-19 05:09:37] -rw------- 1 boinc boinc      4542 Apr 19 05:09 pilotlog.txt
[2025-04-19 05:09:37] -rw------- 1 boinc boinc    331416 Apr 19 05:09 log.44075483._071176.job.log.1
[2025-04-19 05:09:37] -rw------- 1 boinc boinc       357 Apr 19 05:09 output.list
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc       620 Apr 19 05:09 runtime_log
[2025-04-19 05:09:37] -rw------- 1 boinc boinc    706560 Apr 19 05:09 result.tar.gz
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc     11078 Apr 19 05:09 runtime_log.err
[2025-04-19 05:09:37] -rw------- 1 boinc boinc       662 Apr 19 05:09 Pm5MDmsI3P7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmFJ5KDmAJh5Bn.diag
[2025-04-19 05:09:37] -rw-r--r-- 1 boinc boinc     22253 Apr 19 05:09 stderr.txt
[2025-04-19 05:09:37] HITS file was successfully produced:
[2025-04-19 05:09:37] -rw------- 1 boinc boinc 188619221 Apr 19 05:08 shared/HITS.pool.root.1
[2025-04-19 05:09:37]  *** Contents of shared directory: ***
[2025-04-19 05:09:37] total 402048
[2025-04-19 05:09:37] -rw-r--r-- 2 boinc boinc 221829122 Apr 19 04:15 ATLAS.root_0
[2025-04-19 05:09:37] -rw-r--r-- 2 boinc boinc     17569 Apr 19 04:15 start_atlas.sh
[2025-04-19 05:09:37] -rw-r--r-- 2 boinc boinc    508895 Apr 19 04:15 input.tar.gz
[2025-04-19 05:09:37] -rw------- 1 boinc boinc 188619221 Apr 19 05:08 HITS.pool.root.1
[2025-04-19 05:09:37] -rw------- 1 boinc boinc    706560 Apr 19 05:09 result.tar.gz
05:09:38 (1669444): run_atlas exited; CPU time 27517.330665
05:09:38 (1669444): called boinc_finish(0)

</stderr_txt>
]]>

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