Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:38:47 (2974857): wrapper (7.7.26015): starting
19:38:47 (2974857): wrapper: running run_atlas (--nthreads 9)
[2025-04-18 19:38:47] Arguments: --nthreads 9
[2025-04-18 19:38:47] Threads: 9
[2025-04-18 19:38:47] Checking for CVMFS
[2025-04-18 19:38:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 19:38:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 19:38:47] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 19:38:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 19:38:47] 2.12.6.0 2555540 212046 357604 145019 3 64 36318530 40960000 13412 130560 0 79255058 99.599 92597079 31292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-18 19:38:47] CVMFS is ok
[2025-04-18 19:38:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 19:38:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 19:38:47] Further information can be found at the LHC@home message board.
[2025-04-18 19:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 19:38:47] Checking for apptainer binary...
[2025-04-18 19:38:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 19:38:47] Running /usr/bin/apptainer --version
[2025-04-18 19:38:47] apptainer version 1.4.0-1.el9
[2025-04-18 19:38:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 19:39:08] c6-8-12-3.aglt2.org
[2025-04-18 19:39:08] apptainer works
[2025-04-18 19:39:08] Set ATHENA_PROC_NUMBER=9
[2025-04-18 19:39:08] Set ATHENA_CORE_NUMBER=9
[2025-04-18 19:39:08] Starting ATLAS job with PandaID=6602375785
[2025-04-18 19:39:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 21:57:54]  *** The last 200 lines of the pilot log: ***
[2025-04-18 21:57:54] 2025-04-19 01:57:40,504 | INFO     | mean x: 1745023728.4296296
[2025-04-18 21:57:54] 2025-04-19 01:57:40,504 | INFO     | mean y: 2338142.4814814813
[2025-04-18 21:57:54] 2025-04-19 01:57:40,504 | INFO     | -- intersect: -153859700720.81613
[2025-04-18 21:57:54] 2025-04-19 01:57:40,504 | INFO     | intersect: -153859700720.81613
[2025-04-18 21:57:54] 2025-04-19 01:57:40,505 | INFO     | chi2: 5.956427203134264
[2025-04-18 21:57:54] 2025-04-19 01:57:40,505 | INFO     | sum of square deviations: 681370482.3769256
[2025-04-18 21:57:54] 2025-04-19 01:57:40,505 | INFO     | sum of deviations: 73016625221.80775
[2025-04-18 21:57:54] 2025-04-19 01:57:40,506 | INFO     | mean x: 1745023575.9307692
[2025-04-18 21:57:54] 2025-04-19 01:57:40,506 | INFO     | mean y: 2348371.423076923
[2025-04-18 21:57:54] 2025-04-19 01:57:40,506 | INFO     | -- intersect: -186996847723.00208
[2025-04-18 21:57:54] 2025-04-19 01:57:40,506 | INFO     | intersect: -186996847723.00208
[2025-04-18 21:57:54] 2025-04-19 01:57:40,506 | INFO     | chi2: 5.245265647035241
[2025-04-18 21:57:54] 2025-04-19 01:57:40,506 | INFO     | current chi2=5.245265647035241 (change=11.939398096308643 %)
[2025-04-18 21:57:54] 2025-04-19 01:57:40,506 | INFO     | right removable region: 129
[2025-04-18 21:57:54] 2025-04-19 01:57:40,506 | INFO     | sum of square deviations: 681351694.6230773
[2025-04-18 21:57:54] 2025-04-19 01:57:40,507 | INFO     | sum of deviations: 32888972919.0923
[2025-04-18 21:57:54] 2025-04-19 01:57:40,507 | INFO     | mean x: 1745023880.9461539
[2025-04-18 21:57:54] 2025-04-19 01:57:40,507 | INFO     | mean y: 2402096.5846153847
[2025-04-18 21:57:54] 2025-04-19 01:57:40,507 | INFO     | -- intersect: -84230224924.84901
[2025-04-18 21:57:54] 2025-04-19 01:57:40,507 | INFO     | intersect: -84230224924.84901
[2025-04-18 21:57:54] 2025-04-19 01:57:40,507 | INFO     | chi2: 3.0377598551204583
[2025-04-18 21:57:54] 2025-04-19 01:57:40,508 | INFO     | current chi2=3.0377598551204583 (change=49.00030250479695 %)
[2025-04-18 21:57:54] 2025-04-19 01:57:40,508 | INFO     | sum of square deviations: 605713981.087999
[2025-04-18 21:57:54] 2025-04-19 01:57:40,508 | INFO     | sum of deviations: 7521482032.487987
[2025-04-18 21:57:54] 2025-04-19 01:57:40,508 | INFO     | mean x: 1745024033.464
[2025-04-18 21:57:54] 2025-04-19 01:57:40,508 | INFO     | mean y: 2453290.664
[2025-04-18 21:57:54] 2025-04-19 01:57:40,509 | INFO     | -- intersect: -21666465248.055264
[2025-04-18 21:57:54] 2025-04-19 01:57:40,509 | INFO     | intersect: -21666465248.055264
[2025-04-18 21:57:54] 2025-04-19 01:57:40,509 | INFO     | chi2: 1.5703997931967244
[2025-04-18 21:57:54] 2025-04-19 01:57:40,509 | INFO     | current chi2=1.5703997931967244 (change=48.30401782584449 %)
[2025-04-18 21:57:54] 2025-04-19 01:57:40,509 | INFO     | sum of square deviations: 535890329.96666616
[2025-04-18 21:57:54] 2025-04-19 01:57:40,510 | INFO     | sum of deviations: -9195776216.349998
[2025-04-18 21:57:54] 2025-04-19 01:57:40,510 | INFO     | mean x: 1745024185.9833333
[2025-04-18 21:57:54] 2025-04-19 01:57:40,510 | INFO     | mean y: 2489417.825
[2025-04-18 21:57:54] 2025-04-19 01:57:40,510 | INFO     | -- intersect: 29946772807.71041
[2025-04-18 21:57:54] 2025-04-19 01:57:40,510 | INFO     | intersect: 29946772807.71041
[2025-04-18 21:57:54] 2025-04-19 01:57:40,510 | INFO     | chi2: 0.7545429315027211
[2025-04-18 21:57:54] 2025-04-19 01:57:40,510 | INFO     | current chi2=0.7545429315027211 (change=51.9521758235357 %)
[2025-04-18 21:57:54] 2025-04-19 01:57:40,510 | INFO     | sum of square deviations: 471648178.74782526
[2025-04-18 21:57:54] 2025-04-19 01:57:40,511 | INFO     | sum of deviations: -9587904079.304344
[2025-04-18 21:57:54] 2025-04-19 01:57:40,511 | INFO     | mean x: 1745024338.5043478
[2025-04-18 21:57:54] 2025-04-19 01:57:40,511 | INFO     | mean y: 2490244.6086956523
[2025-04-18 21:57:54] 2025-04-19 01:57:40,511 | INFO     | -- intersect: 35476232596.48319
[2025-04-18 21:57:54] 2025-04-19 01:57:40,511 | INFO     | intersect: 35476232596.48319
[2025-04-18 21:57:54] 2025-04-19 01:57:40,511 | INFO     | chi2: 0.7396006679360171
[2025-04-18 21:57:54] 2025-04-19 01:57:40,511 | INFO     | current chi2=0.7396006679360171 (change=1.9803066125005695 %)
[2025-04-18 21:57:54] 2025-04-19 01:57:40,511 | INFO     | left removable region: 40
[2025-04-18 21:57:54] 2025-04-19 01:57:40,512 | INFO     | sum of square deviations: 218632123.91011253
[2025-04-18 21:57:54] 2025-04-19 01:57:40,512 | INFO     | sum of deviations: 726641503.5955057
[2025-04-18 21:57:54] 2025-04-19 01:57:40,512 | INFO     | mean x: 1745024765.5617979
[2025-04-18 21:57:54] 2025-04-19 01:57:40,512 | INFO     | mean y: 2501017.5280898875
[2025-04-18 21:57:54] 2025-04-19 01:57:40,512 | INFO     | -- intersect: -5797229583.72858
[2025-04-18 21:57:54] 2025-04-19 01:57:40,512 | INFO     | intersect: -5797229583.72858
[2025-04-18 21:57:54] 2025-04-19 01:57:40,512 | INFO     | chi2: 0.0005441825742599561
[2025-04-18 21:57:54] 2025-04-19 01:57:40,513 | INFO     | -- intersect: -5797229583.72858
[2025-04-18 21:57:54] 2025-04-19 01:57:40,513 | INFO     | current memory leak: 3.32 B/s (using 89 data points, chi2=0.00)
[2025-04-18 21:57:54] 2025-04-19 01:57:40,513 | INFO     | ..............................
[2025-04-18 21:57:54] 2025-04-19 01:57:40,513 | INFO     | . Timing measurements:
[2025-04-18 21:57:54] 2025-04-19 01:57:40,514 | INFO     | . get job = 0 s
[2025-04-18 21:57:54] 2025-04-19 01:57:40,514 | INFO     | . initial setup = 4 s
[2025-04-18 21:57:54] 2025-04-19 01:57:40,514 | INFO     | . payload setup = 19 s
[2025-04-18 21:57:54] 2025-04-19 01:57:40,514 | INFO     | . stage-in = 0 s
[2025-04-18 21:57:54] 2025-04-19 01:57:40,514 | INFO     | . payload execution = 8199 s
[2025-04-18 21:57:54] 2025-04-19 01:57:40,514 | INFO     | . stage-out = 2 s
[2025-04-18 21:57:54] 2025-04-19 01:57:40,514 | INFO     | . log creation = 0 s
[2025-04-18 21:57:54] 2025-04-19 01:57:40,514 | INFO     | ..............................
[2025-04-18 21:57:54] 2025-04-19 01:57:40,594 | INFO     | 
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | job summary report
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | --------------------------------------------------
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | PanDA job id: 6602375785
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | task id: 44075483
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | errors: (none)
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | pilot state: finished 
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | transexitcode: 0
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | exeerrorcode: 0
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | exeerrordiag: 
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | exitcode: 0
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | exitmsg: OK
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | cpuconsumptiontime: 38074 s
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | nevents: 400
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | neventsw: 0
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | pid: 2993219
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | pgrp: 2993219
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | corecount: 9
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | event service: False
[2025-04-18 21:57:54] 2025-04-19 01:57:40,595 | INFO     | sizes: {0: 2426598, 1: 2426797, 12: 2426797, 13: 2427031, 22: 2427087, 8222: 2454818, 8223: 2454945, 8225: 2463942, 8228: 2463998, 8249: 2464168}
[2025-04-18 21:57:54] 2025-04-19 01:57:40,596 | INFO     | --------------------------------------------------
[2025-04-18 21:57:54] 2025-04-19 01:57:40,596 | INFO     | 
[2025-04-18 21:57:54] 2025-04-19 01:57:40,596 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-18 21:57:54] 2025-04-19 01:57:40,615 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,615 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,615 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,615 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 21:57:54] 2025-04-19 01:57:40,616 | INFO     | job 6602375785 has completed (purged errors)
[2025-04-18 21:57:54] 2025-04-19 01:57:40,617 | INFO     | overall cleanup function is called
[2025-04-18 21:57:54] 2025-04-19 01:57:41,625 | INFO     | --- collectZombieJob: --- 10, [2993219]
[2025-04-18 21:57:54] 2025-04-19 01:57:41,625 | INFO     | zombie collector waiting for pid 2993219
[2025-04-18 21:57:54] 2025-04-19 01:57:41,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 21:57:54] 2025-04-19 01:57:41,625 | INFO     | collected zombie processes
[2025-04-18 21:57:54] 2025-04-19 01:57:41,625 | INFO     | will attempt to kill all subprocesses of pid=2993219
[2025-04-18 21:57:54] 2025-04-19 01:57:42,389 | INFO     | process IDs to be killed: [2993219] (in reverse order)
[2025-04-18 21:57:54] 2025-04-19 01:57:42,532 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 21:57:54] 2025-04-19 01:57:42,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 21:57:54] 2025-04-19 01:57:42,580 | INFO     | did not find any defunct processes belonging to 2993219
[2025-04-18 21:57:54] 2025-04-19 01:57:42,597 | INFO     | did not find any defunct processes belonging to 2993219
[2025-04-18 21:57:54] 2025-04-19 01:57:42,598 | INFO     | ready for new job
[2025-04-18 21:57:54] 2025-04-19 01:57:42,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 21:57:54] 2025-04-19 01:57:42,599 | INFO     | **************************************
[2025-04-18 21:57:54] 2025-04-19 01:57:42,600 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 21:57:54] 2025-04-19 01:57:42,601 | INFO     | **************************************
[2025-04-18 21:57:54] 2025-04-19 01:57:42,601 | INFO     | 
[2025-04-18 21:57:54] 2025-04-19 01:57:42,617 | INFO     | architecture information:
[2025-04-18 21:57:54] 2025-04-19 01:57:42,619 | INFO     | executing command: cat /etc/os-release
[2025-04-18 21:57:54] 2025-04-19 01:57:42,664 | INFO     | cat /etc/os-release:
[2025-04-18 21:57:54] NAME="CentOS Linux"
[2025-04-18 21:57:54] VERSION="7 (Core)"
[2025-04-18 21:57:54] ID="centos"
[2025-04-18 21:57:54] ID_LIKE="rhel fedora"
[2025-04-18 21:57:54] VERSION_ID="7"
[2025-04-18 21:57:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 21:57:54] ANSI_COLOR="0;31"
[2025-04-18 21:57:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 21:57:54] HOME_URL="https://www.centos.org/"
[2025-04-18 21:57:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 21:57:54] 
[2025-04-18 21:57:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 21:57:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 21:57:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 21:57:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 21:57:54] 
[2025-04-18 21:57:54] 2025-04-19 01:57:42,664 | INFO     | **************************************
[2025-04-18 21:57:54] 2025-04-19 01:57:43,168 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-18 21:57:54] 2025-04-19 01:57:43,217 | INFO     | sufficient remaining disk space (54952722432 B)
[2025-04-18 21:57:54] 2025-04-19 01:57:43,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 21:57:54] 2025-04-19 01:57:43,219 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 21:57:54] 2025-04-19 01:57:43,219 | INFO     | update_server=False
[2025-04-18 21:57:54] 2025-04-19 01:57:43,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 21:57:54] 2025-04-19 01:57:43,220 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 21:57:54] 2025-04-19 01:57:43,304 | INFO     | all job control threads have been joined
[2025-04-18 21:57:54] 2025-04-19 01:57:43,414 | INFO     | all data control threads have been joined
[2025-04-18 21:57:54] 2025-04-19 01:57:43,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 21:57:54] 2025-04-19 01:57:43,550 | INFO     | aborting loop
[2025-04-18 21:57:54] 2025-04-19 01:57:43,729 | INFO     | all payload control threads have been joined
[2025-04-18 21:57:54] 2025-04-19 01:57:44,228 | INFO     | [job] retrieve thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:44,326 | INFO     | [job] control thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:44,422 | INFO     | [data] control thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:44,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 21:57:54] 2025-04-19 01:57:44,510 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:44,563 | INFO     | [job] job monitor thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:44,640 | INFO     | PID=2979064 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-18 21:57:54] 2025-04-19 01:57:44,640 | INFO     | .. there are 17 such processes running
[2025-04-18 21:57:54] 2025-04-19 01:57:44,640 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 21:57:54] 2025-04-19 01:57:44,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 21:57:54] 2025-04-19 01:57:44,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 21:57:54] 2025-04-19 01:57:44,735 | INFO     | [payload] control thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:44,809 | INFO     | [payload] validate_post thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:44,810 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:44,968 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:45,235 | INFO     | [data] copytool_out thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:45,383 | INFO     | [job] validate thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:45,407 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:45,432 | INFO     | [data] copytool_in thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:45,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 21:57:54] 2025-04-19 01:57:45,702 | INFO     | [payload] failed_post thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:46,616 | INFO     | [job] queue monitor thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:48,503 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 21:57:54] 2025-04-19 01:57:49,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139636102825792)>', '<ExcThread(monitor, started 139635619522304)>']
[2025-04-18 21:57:54] 2025-04-19 01:57:49,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 21:57:54] 2025-04-19 01:57:49,675 | INFO     | [monitor] control thread has ended
[2025-04-18 21:57:54] 2025-04-19 01:57:54,028 | INFO     | all workflow threads have been joined
[2025-04-18 21:57:54] 2025-04-19 01:57:54,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 21:57:54] 2025-04-19 01:57:54,029 | INFO     | traces error code: 0
[2025-04-18 21:57:54] 2025-04-19 01:57:54,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 21:57:54] 2025-04-19 01:57:54,302 [wrapper] ==== pilot stdout END ====
[2025-04-18 21:57:54] 2025-04-19 01:57:54,318 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 21:57:54] 2025-04-19 01:57:54,336 [wrapper] pilotpid: 2979064
[2025-04-18 21:57:54] 2025-04-19 01:57:54,383 [wrapper] Pilot exit status: 0
[2025-04-18 21:57:54] 2025-04-19 01:57:54,441 [wrapper] pandaids: 6602375785
[2025-04-18 21:57:54] 2025-04-19 01:57:54,564 [wrapper] cleanup supervisor_pilot 3366271 2979065
[2025-04-18 21:57:54] 2025-04-19 01:57:54,568 [wrapper] Test setup, not cleaning
[2025-04-18 21:57:54] 2025-04-19 01:57:54,571 [wrapper] apfmon messages muted
[2025-04-18 21:57:54] 2025-04-19 01:57:54,585 [wrapper] ==== wrapper stdout END ====
[2025-04-18 21:57:54] 2025-04-19 01:57:54,603 [wrapper] ==== wrapper stderr END ====
[2025-04-18 21:57:54]  *** Error codes and diagnostics ***
[2025-04-18 21:57:54]     "exeErrorCode": 0,
[2025-04-18 21:57:54]     "exeErrorDiag": "",
[2025-04-18 21:57:54]     "pilotErrorCode": 0,
[2025-04-18 21:57:54]     "pilotErrorDiag": "",
[2025-04-18 21:57:54]  *** Listing of results directory ***
[2025-04-18 21:57:54] total 421244
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas      5111 Apr 14 16:48 queuedata.json
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas    495897 Apr 14 16:50 pilot3.tar.gz
[2025-04-18 21:57:54] -rwx------. 1 boincer umatlas     37140 Apr 14 16:51 runpilot2-wrapper.sh
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas       100 Apr 18 19:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 21:57:54] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 19:38 run_atlas
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas       105 Apr 18 19:38 job.xml
[2025-04-18 21:57:54] -rw-r--r--. 2 boincer umatlas 226422995 Apr 18 19:38 EVNT.44075481._000813.pool.root.1
[2025-04-18 21:57:54] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 19:38 start_atlas.sh
[2025-04-18 21:57:54] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 19:38 shared
[2025-04-18 21:57:54] -rw-r--r--. 2 boincer umatlas    508885 Apr 18 19:38 input.tar.gz
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas         0 Apr 18 19:38 boinc_lockfile
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas      2576 Apr 18 19:39 pandaJob.out
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas       467 Apr 18 19:39 setup.sh.local
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas    991300 Apr 18 19:39 agis_schedconf.cvmfs.json
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas   1618536 Apr 18 19:39 agis_ddmendpoints.agis.ALL.json
[2025-04-18 21:57:54] drwx------. 4 boincer umatlas      4096 Apr 18 19:39 pilot3
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas      6840 Apr 18 21:45 init_data.xml
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas       530 Apr 18 21:56 boinc_task_state.xml
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas 198905818 Apr 18 21:56 HITS.44075483._020514.pool.root.1
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas        95 Apr 18 21:57 pilot_heartbeat.json
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas      1049 Apr 18 21:57 memory_monitor_summary.json
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas    342127 Apr 18 21:57 log.44075483._020514.job.log.tgz.1
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas      7713 Apr 18 21:57 heartbeat.json
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas        27 Apr 18 21:57 wrapper_checkpoint.txt
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 21:57 boinc_mmap_file
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas      4748 Apr 18 21:57 pilotlog.txt
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas    747814 Apr 18 21:57 log.44075483._020514.job.log.1
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas       357 Apr 18 21:57 output.list
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas       620 Apr 18 21:57 runtime_log
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas   1105920 Apr 18 21:57 result.tar.gz
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas     11423 Apr 18 21:57 runtime_log.err
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas       653 Apr 18 21:57 rolMDm1wfO7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmAh0KDmurT6nm.diag
[2025-04-18 21:57:54] -rw-r--r--. 1 boincer umatlas      2143 Apr 18 21:57 stderr.txt
[2025-04-18 21:57:54] HITS file was successfully produced:
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas 198905818 Apr 18 21:56 shared/HITS.pool.root.1
[2025-04-18 21:57:54]  *** Contents of shared directory: ***
[2025-04-18 21:57:54] total 416972
[2025-04-18 21:57:54] -rw-r--r--. 2 boincer umatlas 226422995 Apr 18 19:38 ATLAS.root_0
[2025-04-18 21:57:54] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 19:38 start_atlas.sh
[2025-04-18 21:57:54] -rw-r--r--. 2 boincer umatlas    508885 Apr 18 19:38 input.tar.gz
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas 198905818 Apr 18 21:56 HITS.pool.root.1
[2025-04-18 21:57:54] -rw-------. 1 boincer umatlas   1105920 Apr 18 21:57 result.tar.gz
21:57:56 (2974857): run_atlas exited; CPU time 38252.857763
21:57:56 (2974857): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN