Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 11:58:19 (14904): Detected: vboxwrapper 26206
2025-04-19 11:58:19 (14904): Detected: BOINC client v7.16.20
2025-04-19 11:58:20 (14904): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-04-19 11:58:20 (14904): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 11:58:20 (14904): Create VM. (boinc_cb7fbc5b42c3fc13, slot#4)
2025-04-19 11:58:21 (14904): Setting Memory Size for VM. (4800MB)
2025-04-19 11:58:21 (14904): Setting CPU Count for VM. (8)
2025-04-19 11:58:22 (14904): Setting Chipset Options for VM.
2025-04-19 11:58:22 (14904): Setting Graphics Controller Options for VM.
2025-04-19 11:58:22 (14904): Setting Boot Options for VM.
2025-04-19 11:58:22 (14904): Setting Network Configuration for NAT.
2025-04-19 11:58:23 (14904): Enabling VM Network Access.
2025-04-19 11:58:23 (14904): Disabling USB Support for VM.
2025-04-19 11:58:23 (14904): Disabling COM Port Support for VM.
2025-04-19 11:58:23 (14904): Disabling LPT Port Support for VM.
2025-04-19 11:58:24 (14904): Disabling Audio Support for VM.
2025-04-19 11:58:24 (14904): Disabling Clipboard Support for VM.
2025-04-19 11:58:24 (14904): Disabling Drag and Drop Support for VM.
2025-04-19 11:58:24 (14904): Adding storage controller(s) to VM.
2025-04-19 11:58:25 (14904): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 11:58:25 (14904): Adding VirtualBox Guest Additions to VM.
2025-04-19 11:58:26 (14904): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 11:58:26 (14904): forwarding host port 54176 to guest port 80
2025-04-19 11:58:26 (14904): Enabling remote desktop for VM.
2025-04-19 11:58:26 (14904): Required extension pack not installed, remote desktop not enabled.
2025-04-19 11:58:26 (14904): Enabling shared directory for VM.
2025-04-19 11:58:27 (14904): Starting VM using VBoxManage interface. (boinc_cb7fbc5b42c3fc13, slot#4)
2025-04-19 11:58:31 (14904): Successfully started VM. (PID = '15736')
2025-04-19 11:58:31 (14904): Reporting VM Process ID to BOINC.
2025-04-19 11:58:31 (14904): Guest Log: BIOS: VirtualBox 6.1.50
2025-04-19 11:58:31 (14904): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 11:58:31 (14904): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 11:58:31 (14904): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 11:58:31 (14904): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 11:58:31 (14904): Detected: Web Application Enabled (http://localhost:54176)
2025-04-19 11:58:31 (14904): Preference change detected
2025-04-19 11:58:31 (14904): Setting CPU throttle for VM. (100%)
2025-04-19 11:58:32 (14904): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 11:58:33 (14904): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 11:58:33 (14904): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 11:58:36 (14904): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 11:58:36 (14904): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 11:58:36 (14904): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 11:58:41 (14904): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 11:58:41 (14904): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 11:58:47 (14904): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 11:58:47 (14904): Guest Log: 00:00:00.000279 main     Log opened 2025-04-19T11:58:45.791323000Z
2025-04-19 11:58:47 (14904): Guest Log: 00:00:00.000534 main     OS Product: Linux
2025-04-19 11:58:47 (14904): Guest Log: 00:00:00.000584 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 11:58:47 (14904): Guest Log: 00:00:00.000618 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 11:58:47 (14904): Guest Log: 00:00:00.000641 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 11:58:47 (14904): Guest Log: 00:00:00.000642 main     Process ID: 1369
2025-04-19 11:58:47 (14904): Guest Log: 00:00:00.000642 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 11:58:47 (14904): Guest Log: 00:00:00.003295 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 11:58:47 (14904): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 11:58:47 (14904): Guest Log: [INFO] Mounting shared directory
2025-04-19 11:58:47 (14904): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 11:58:50 (14904): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 11:58:50 (14904): Guest Log: [INFO] Detected branch: prod
2025-04-19 11:58:50 (14904): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 11:58:50 (14904): Guest Log: Copying input files
2025-04-19 11:58:51 (14904): Guest Log: Copied input files into RunAtlas.
2025-04-19 11:58:51 (14904): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 11:58:51 (14904): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 11:58:51 (14904): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 11:58:51 (14904): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 11:58:57 (14904): Guest Log: 00:00:10.018208 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 733 114 000ns (GuestNow=1 745 056 737 069 086 000 ns GuestLast=1 745 063 925 802 200 000 ns fSetTimeLastLoop=true )
2025-04-19 11:59:00 (14904): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 11:59:00 (14904): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 11:59:00 (14904): Guest Log: 2.6.3.0 1646 0 32200 145033 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 11:59:01 (14904): Guest Log: copied the webapp to /var/www
2025-04-19 11:59:01 (14904): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-19 11:59:01 (14904): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-19 11:59:01 (14904): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 11:59:01 (14904): Guest Log:  *** Starting ATLAS job. (PandaID=6605317372 taskID=44075483) ***
2025-04-19 13:03:23 (14904): Guest Log:  *** Job finished ***
2025-04-19 13:03:23 (14904): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:07,128 | INFO     | [data] queue_monitor thread has finished
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:13,855 | INFO     | job.realtimelogging is not enabled
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:14,870 | INFO     | [payload] run_realtimelog thread has finished
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:15,053 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689963009856)>', '<ExcThread(monitor, started 139689273042688)>']
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:15,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:15,503 | INFO     | [monitor] control thread has ended
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,308 | INFO     | all workflow threads have been joined
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,308 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,308 | INFO     | traces error code: 0
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,380 [wrapper] ==== pilot stdout END ====
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,384 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,388 [wrapper] pilotpid: 6012
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,393 [wrapper] Pilot exit status: 0
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,617 [wrapper] pandaids: 6605317372
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,643 [wrapper] cleanup supervisor_pilot 31064 6013
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,647 [wrapper] Test setup, not cleaning
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,651 [wrapper] apfmon messages muted
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,655 [wrapper] ==== wrapper stdout END ====
2025-04-19 13:03:23 (14904): Guest Log: 2025-04-19 11:03:20,659 [wrapper] ==== wrapper stderr END ====
2025-04-19 13:03:23 (14904): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 13:03:23 (14904): Guest Log:     "exeErrorCode": 0,
2025-04-19 13:03:23 (14904): Guest Log:     "exeErrorDiag": "",
2025-04-19 13:03:23 (14904): Guest Log:     "pilotErrorCode": 0,
2025-04-19 13:03:23 (14904): Guest Log:     "pilotErrorDiag": "",
2025-04-19 13:03:23 (14904): Guest Log:  *** Listing of results directory ***
2025-04-19 13:03:23 (14904): Guest Log: total 197964
2025-04-19 13:03:23 (14904): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 13:20 pilot3.tar.gz
2025-04-19 13:03:23 (14904): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 13:36 queuedata.json
2025-04-19 13:03:23 (14904): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 13:37 runpilot2-wrapper.sh
2025-04-19 13:03:23 (14904): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 19 09:58 start_atlas.sh
2025-04-19 13:03:23 (14904): Guest Log: -rwxr-xr-x. 1 atlas atlas    508890 Apr 19 09:58 input.tar.gz
2025-04-19 13:03:23 (14904): Guest Log: -rwxr-xr-x. 1 atlas atlas      8774 Apr 19 09:58 init_data.xml
2025-04-19 13:03:23 (14904): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 09:58 EVNT.44075481._002193.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 13:03:23 (14904): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 19 09:59 pandaJob.out
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 09:59 setup.sh.local
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas    991300 Apr 19 09:59 agis_schedconf.cvmfs.json
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 09:59 agis_ddmendpoints.agis.ALL.json
2025-04-19 13:03:23 (14904): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 09:59 pilot3
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 11:02 pilot_heartbeat.json
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas 197583136 Apr 19 11:02 HITS.44075483._056350.pool.root.1
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas      1026 Apr 19 11:02 memory_monitor_summary.json
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas    299991 Apr 19 11:02 log.44075483._056350.job.log.tgz.1
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas      7715 Apr 19 11:03 heartbeat.json
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas      4801 Apr 19 11:03 pilotlog.txt
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas    362886 Apr 19 11:03 log.44075483._056350.job.log.1
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 11:03 output.list
2025-04-19 13:03:23 (14904): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 11:03 runtime_log
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas    686080 Apr 19 11:03 result.tar.gz
2025-04-19 13:03:23 (14904): Guest Log: -rw-r--r--. 1 atlas atlas     10935 Apr 19 11:03 runtime_log.err
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas       650 Apr 19 11:03 GG0NDmWbeP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm503KDmciQJNo.diag
2025-04-19 13:03:23 (14904): Guest Log: Looking for outputfile HITS.44075483._056350.pool.root.1
2025-04-19 13:03:23 (14904): Guest Log: HITS file was successfully produced
2025-04-19 13:03:23 (14904): Guest Log: -rw-------. 1 atlas atlas 197583136 Apr 19 11:02 /home/atlas/RunAtlas/HITS.44075483._056350.pool.root.1
2025-04-19 13:03:24 (14904): Guest Log: Successfully finished the ATLAS job!
2025-04-19 13:03:24 (14904): Guest Log: Copying the results back to the shared directory!
2025-04-19 13:03:24 (14904): Guest Log:  *** Contents of shared directory: ***
2025-04-19 13:03:24 (14904): Guest Log: total 410936
2025-04-19 13:03:24 (14904): Guest Log: -rwxrwxrwx. 1 root root 221976469 Apr 19 09:58 ATLAS.root_0
2025-04-19 13:03:24 (14904): Guest Log: -rwxrwxrwx. 1 root root 197583136 Apr 19  2025 HITS.pool.root.1
2025-04-19 13:03:24 (14904): Guest Log: -rwxrwxrwx. 1 root root      8774 Apr 19 09:58 init_data.xml
2025-04-19 13:03:24 (14904): Guest Log: -rwxrwxrwx. 1 root root    508890 Apr 18 22:03 input.tar.gz
2025-04-19 13:03:24 (14904): Guest Log: -rwxrwxrwx. 1 root root    686080 Apr 19  2025 result.tar.gz
2025-04-19 13:03:24 (14904): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 22:03 start_atlas.sh
2025-04-19 13:03:24 (14904): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 13:03:24 (14904): VM Completion File Detected.
2025-04-19 13:03:24 (14904): Powering off VM.
2025-04-19 13:03:25 (14904): Successfully stopped VM.
2025-04-19 13:03:25 (14904): Deregistering VM. (boinc_cb7fbc5b42c3fc13, slot#4)
2025-04-19 13:03:25 (14904): Removing network bandwidth throttle group from VM.
2025-04-19 13:03:25 (14904): Removing VM from VirtualBox.
13:03:30 (14904): called boinc_finish(0)

</stderr_txt>
]]>

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