Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:39:18 (326323): wrapper (7.7.26015): starting
18:39:18 (326323): wrapper: running run_atlas (--nthreads 8)
[2025-04-18 18:39:18] Arguments: --nthreads 8
[2025-04-18 18:39:18] Threads: 8
[2025-04-18 18:39:18] Checking for CVMFS
[2025-04-18 18:39:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 18:39:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 18:39:19] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 18:39:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 18:39:23] 2.12.6.0 345227 74493 626892 145018 1 218 20522149 32935936 34906 130560 0 180564447 99.662 157621373 18577 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-18 18:39:23] CVMFS is ok
[2025-04-18 18:39:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 18:39:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 18:39:23] Further information can be found at the LHC@home message board.
[2025-04-18 18:39:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 18:39:23] Checking for apptainer binary...
[2025-04-18 18:39:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 18:39:23] Running /usr/bin/apptainer --version
[2025-04-18 18:39:23] apptainer version 1.4.0-1.el9
[2025-04-18 18:39:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 18:39:24] c-3-40.aglt2.org
[2025-04-18 18:39:24] apptainer works
[2025-04-18 18:39:24] Set ATHENA_PROC_NUMBER=8
[2025-04-18 18:39:24] Set ATHENA_CORE_NUMBER=8
[2025-04-18 18:39:24] Starting ATLAS job with PandaID=6606782999
[2025-04-18 18:39:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 01:39:02]  *** The last 200 lines of the pilot log: ***
[2025-04-19 01:39:02] 2025-04-19 05:38:39,161 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 01:39:02] 2025-04-19 05:38:39,188 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 01:39:02] 2025-04-19 05:38:39,189 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 01:39:02] 2025-04-19 05:38:39,189 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 01:39:02] 2025-04-19 05:38:39,255 | INFO     | fitting pss+swap vs Time
[2025-04-19 01:39:02] 2025-04-19 05:38:39,256 | INFO     | sum of square deviations: 21059256877.99754
[2025-04-19 01:39:02] 2025-04-19 05:38:39,299 | INFO     | sum of deviations: 163021538323.90213
[2025-04-19 01:39:02] 2025-04-19 05:38:39,299 | INFO     | mean x: 1745028634.8357842
[2025-04-19 01:39:02] 2025-04-19 05:38:39,299 | INFO     | mean y: 2022766.431372549
[2025-04-19 01:39:02] 2025-04-19 05:38:39,299 | INFO     | -- intersect: -13506395603.61125
[2025-04-19 01:39:02] 2025-04-19 05:38:39,299 | INFO     | intersect: -13506395603.61125
[2025-04-19 01:39:02] 2025-04-19 05:38:39,300 | INFO     | chi2: 10.716527238861488
[2025-04-19 01:39:02] 2025-04-19 05:38:39,301 | INFO     | sum of square deviations: 20294484322.426723
[2025-04-19 01:39:02] 2025-04-19 05:38:39,307 | INFO     | sum of deviations: 265198500488.8586
[2025-04-19 01:39:02] 2025-04-19 05:38:39,394 | INFO     | mean x: 1745028482.3399503
[2025-04-19 01:39:02] 2025-04-19 05:38:39,394 | INFO     | mean y: 2043141.9280397021
[2025-04-19 01:39:02] 2025-04-19 05:38:39,394 | INFO     | -- intersect: -22801144634.3439
[2025-04-19 01:39:02] 2025-04-19 05:38:39,394 | INFO     | intersect: -22801144634.3439
[2025-04-19 01:39:02] 2025-04-19 05:38:39,395 | INFO     | chi2: 7.3944017238672
[2025-04-19 01:39:02] 2025-04-19 05:38:39,395 | INFO     | current chi2=7.3944017238672 (change=31.00001932479786 %)
[2025-04-19 01:39:02] 2025-04-19 05:38:39,396 | INFO     | sum of square deviations: 19548431843.027687
[2025-04-19 01:39:02] 2025-04-19 05:38:39,419 | INFO     | sum of deviations: 269299362891.03278
[2025-04-19 01:39:02] 2025-04-19 05:38:39,419 | INFO     | mean x: 1745028329.8417087
[2025-04-19 01:39:02] 2025-04-19 05:38:39,420 | INFO     | mean y: 2043975.540201005
[2025-04-19 01:39:02] 2025-04-19 05:38:39,420 | INFO     | -- intersect: -24037481098.73251
[2025-04-19 01:39:02] 2025-04-19 05:38:39,420 | INFO     | intersect: -24037481098.73251
[2025-04-19 01:39:02] 2025-04-19 05:38:39,420 | INFO     | chi2: 7.3387500012751925
[2025-04-19 01:39:02] 2025-04-19 05:38:39,420 | INFO     | current chi2=7.3387500012751925 (change=0.7526196799989705 %)
[2025-04-19 01:39:02] 2025-04-19 05:38:39,420 | INFO     | right removable region: 397
[2025-04-19 01:39:02] 2025-04-19 05:38:39,421 | INFO     | sum of square deviations: 20294400752.426723
[2025-04-19 01:39:02] 2025-04-19 05:38:39,450 | INFO     | sum of deviations: 62240434710.23802
[2025-04-19 01:39:02] 2025-04-19 05:38:39,450 | INFO     | mean x: 1745028787.3399503
[2025-04-19 01:39:02] 2025-04-19 05:38:39,450 | INFO     | mean y: 2042837.9106699752
[2025-04-19 01:39:02] 2025-04-19 05:38:39,451 | INFO     | -- intersect: -5349746142.255729
[2025-04-19 01:39:02] 2025-04-19 05:38:39,451 | INFO     | intersect: -5349746142.255729
[2025-04-19 01:39:02] 2025-04-19 05:38:39,451 | INFO     | chi2: 7.218626520956406
[2025-04-19 01:39:02] 2025-04-19 05:38:39,451 | INFO     | current chi2=7.218626520956406 (change=32.64024473544562 %)
[2025-04-19 01:39:02] 2025-04-19 05:38:39,452 | INFO     | sum of square deviations: 19548289164.341724
[2025-04-19 01:39:02] 2025-04-19 05:38:39,481 | INFO     | sum of deviations: -7561057876.789021
[2025-04-19 01:39:02] 2025-04-19 05:38:39,481 | INFO     | mean x: 1745028939.844221
[2025-04-19 01:39:02] 2025-04-19 05:38:39,481 | INFO     | mean y: 2057098.8743718592
[2025-04-19 01:39:02] 2025-04-19 05:38:39,481 | INFO     | -- intersect: 677014620.7275765
[2025-04-19 01:39:02] 2025-04-19 05:38:39,481 | INFO     | intersect: 677014620.7275765
[2025-04-19 01:39:02] 2025-04-19 05:38:39,519 | INFO     | chi2: 5.6196300015133875
[2025-04-19 01:39:02] 2025-04-19 05:38:39,519 | INFO     | current chi2=5.6196300015133875 (change=22.150980034788734 %)
[2025-04-19 01:39:02] 2025-04-19 05:38:39,519 | INFO     | left removable region: 20
[2025-04-19 01:39:02] 2025-04-19 05:38:39,520 | INFO     | sum of square deviations: 16614246348.657778
[2025-04-19 01:39:02] 2025-04-19 05:38:39,565 | INFO     | sum of deviations: -2342620960.9389915
[2025-04-19 01:39:02] 2025-04-19 05:38:39,565 | INFO     | mean x: 1745028909.3580902
[2025-04-19 01:39:02] 2025-04-19 05:38:39,565 | INFO     | mean y: 2102547.029177719
[2025-04-19 01:39:02] 2025-04-19 05:38:39,566 | INFO     | -- intersect: 248152907.34762958
[2025-04-19 01:39:02] 2025-04-19 05:38:39,566 | INFO     | intersect: 248152907.34762958
[2025-04-19 01:39:02] 2025-04-19 05:38:39,566 | INFO     | chi2: 0.19141777162035015
[2025-04-19 01:39:02] 2025-04-19 05:38:39,566 | INFO     | -- intersect: 248152907.34762958
[2025-04-19 01:39:02] 2025-04-19 05:38:39,567 | INFO     | current memory leak: -0.14 B/s (using 377 data points, chi2=0.19)
[2025-04-19 01:39:02] 2025-04-19 05:38:39,567 | INFO     | ..............................
[2025-04-19 01:39:02] 2025-04-19 05:38:39,568 | INFO     | . Timing measurements:
[2025-04-19 01:39:02] 2025-04-19 05:38:39,568 | INFO     | . get job = 0 s
[2025-04-19 01:39:02] 2025-04-19 05:38:39,568 | INFO     | . initial setup = 6 s
[2025-04-19 01:39:02] 2025-04-19 05:38:39,568 | INFO     | . payload setup = 51 s
[2025-04-19 01:39:02] 2025-04-19 05:38:39,568 | INFO     | . stage-in = 0 s
[2025-04-19 01:39:02] 2025-04-19 05:38:39,568 | INFO     | . payload execution = 24862 s
[2025-04-19 01:39:02] 2025-04-19 05:38:39,568 | INFO     | . stage-out = 9 s
[2025-04-19 01:39:02] 2025-04-19 05:38:39,568 | INFO     | . log creation = 2 s
[2025-04-19 01:39:02] 2025-04-19 05:38:39,568 | INFO     | ..............................
[2025-04-19 01:39:02] 2025-04-19 05:38:40,541 | INFO     | 
[2025-04-19 01:39:02] 2025-04-19 05:38:40,541 | INFO     | job summary report
[2025-04-19 01:39:02] 2025-04-19 05:38:40,541 | INFO     | --------------------------------------------------
[2025-04-19 01:39:02] 2025-04-19 05:38:40,541 | INFO     | PanDA job id: 6606782999
[2025-04-19 01:39:02] 2025-04-19 05:38:40,541 | INFO     | task id: 44075483
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | errors: (none)
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | pilot state: finished 
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | transexitcode: 0
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | exeerrorcode: 0
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | exeerrordiag: 
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | exitcode: 0
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | exitmsg: OK
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | cpuconsumptiontime: 44678 s
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | nevents: 400
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | neventsw: 0
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | pid: 370612
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | pgrp: 370612
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | corecount: 8
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | event service: False
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | sizes: {0: 2425996, 1: 2426681, 2: 2426681, 3: 2426880, 4: 2426936, 15: 2426936, 26: 2427092, 37: 2427120, 45: 2427354, 49: 2427382, 24918: 2461583, 24919: 2461862
[2025-04-19 01:39:02] 2025-04-19 05:38:40,542 | INFO     | --------------------------------------------------
[2025-04-19 01:39:02] 2025-04-19 05:38:40,543 | INFO     | 
[2025-04-19 01:39:02] 2025-04-19 05:38:40,543 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 01:39:02] 2025-04-19 05:38:40,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 01:39:02] 2025-04-19 05:38:40,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 01:39:02] 2025-04-19 05:38:40,688 | INFO     | job 6606782999 has completed (purged errors)
[2025-04-19 01:39:02] 2025-04-19 05:38:40,688 | INFO     | overall cleanup function is called
[2025-04-19 01:39:02] 2025-04-19 05:38:41,706 | INFO     | --- collectZombieJob: --- 10, [370612]
[2025-04-19 01:39:02] 2025-04-19 05:38:41,706 | INFO     | zombie collector waiting for pid 370612
[2025-04-19 01:39:02] 2025-04-19 05:38:41,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 01:39:02] 2025-04-19 05:38:41,706 | INFO     | collected zombie processes
[2025-04-19 01:39:02] 2025-04-19 05:38:41,707 | INFO     | will attempt to kill all subprocesses of pid=370612
[2025-04-19 01:39:02] 2025-04-19 05:38:45,045 | INFO     | process IDs to be killed: [370612] (in reverse order)
[2025-04-19 01:39:02] 2025-04-19 05:38:45,910 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 01:39:02] 2025-04-19 05:38:45,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 01:39:02] 2025-04-19 05:38:46,076 | INFO     | did not find any defunct processes belonging to 370612
[2025-04-19 01:39:02] 2025-04-19 05:38:46,189 | INFO     | did not find any defunct processes belonging to 370612
[2025-04-19 01:39:02] 2025-04-19 05:38:46,189 | INFO     | ready for new job
[2025-04-19 01:39:02] 2025-04-19 05:38:46,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 01:39:02] 2025-04-19 05:38:46,192 | INFO     | **************************************
[2025-04-19 01:39:02] 2025-04-19 05:38:46,192 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 01:39:02] 2025-04-19 05:38:46,192 | INFO     | **************************************
[2025-04-19 01:39:02] 2025-04-19 05:38:46,192 | INFO     | 
[2025-04-19 01:39:02] 2025-04-19 05:38:46,216 | INFO     | architecture information:
[2025-04-19 01:39:02] 2025-04-19 05:38:46,221 | INFO     | executing command: cat /etc/os-release
[2025-04-19 01:39:02] 2025-04-19 05:38:46,303 | INFO     | cat /etc/os-release:
[2025-04-19 01:39:02] NAME="CentOS Linux"
[2025-04-19 01:39:02] VERSION="7 (Core)"
[2025-04-19 01:39:02] ID="centos"
[2025-04-19 01:39:02] ID_LIKE="rhel fedora"
[2025-04-19 01:39:02] VERSION_ID="7"
[2025-04-19 01:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 01:39:02] ANSI_COLOR="0;31"
[2025-04-19 01:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 01:39:02] HOME_URL="https://www.centos.org/"
[2025-04-19 01:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 01:39:02] 
[2025-04-19 01:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 01:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 01:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 01:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 01:39:02] 
[2025-04-19 01:39:02] 2025-04-19 05:38:46,304 | INFO     | **************************************
[2025-04-19 01:39:02] 2025-04-19 05:38:46,806 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 01:39:02] 2025-04-19 05:38:46,904 | INFO     | sufficient remaining disk space (73964453888 B)
[2025-04-19 01:39:02] 2025-04-19 05:38:46,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 01:39:02] 2025-04-19 05:38:46,905 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 01:39:02] 2025-04-19 05:38:46,905 | INFO     | update_server=False
[2025-04-19 01:39:02] 2025-04-19 05:38:46,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 01:39:02] 2025-04-19 05:38:46,906 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 01:39:02] 2025-04-19 05:38:46,906 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 01:39:02] 2025-04-19 05:38:46,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 01:39:02] 2025-04-19 05:38:46,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 01:39:02] 2025-04-19 05:38:46,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 01:39:02] 2025-04-19 05:38:46,973 | INFO     | all payload control threads have been joined
[2025-04-19 01:39:02] 2025-04-19 05:38:47,347 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 01:39:02] 2025-04-19 05:38:47,347 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 01:39:02] 2025-04-19 05:38:47,347 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 01:39:02] 2025-04-19 05:38:47,348 | INFO     | will abort loop
[2025-04-19 01:39:02] 2025-04-19 05:38:47,855 | INFO     | all data control threads have been joined
[2025-04-19 01:39:02] 2025-04-19 05:38:47,911 | INFO     | [job] retrieve thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:47,983 | INFO     | [payload] control thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:48,048 | INFO     | [payload] failed_post thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:48,353 | INFO     | [job] job monitor thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:48,398 | INFO     | all job control threads have been joined
[2025-04-19 01:39:02] 2025-04-19 05:38:48,466 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:48,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:48,681 | INFO     | [data] copytool_in thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:48,795 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:48,866 | INFO     | [data] control thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:48,949 | INFO     | [data] copytool_out thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:49,059 | INFO     | [job] validate thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:49,106 | INFO     | [payload] validate_post thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:49,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 01:39:02] 2025-04-19 05:38:49,322 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:49,404 | INFO     | [job] control thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:49,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 01:39:02] 2025-04-19 05:38:50,256 | INFO     | [job] queue monitor thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:53,765 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 01:39:02] 2025-04-19 05:38:53,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137713289024)>', '<ExcThread(monitor, started 140136956274432)>']
[2025-04-19 01:39:02] 2025-04-19 05:38:54,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 01:39:02] 2025-04-19 05:38:54,037 | INFO     | [monitor] control thread has ended
[2025-04-19 01:39:02] 2025-04-19 05:38:58,990 | INFO     | all workflow threads have been joined
[2025-04-19 01:39:02] 2025-04-19 05:38:58,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 01:39:02] 2025-04-19 05:38:58,990 | INFO     | traces error code: 0
[2025-04-19 01:39:02] 2025-04-19 05:38:58,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 01:39:02] 2025-04-19 05:39:00,270 [wrapper] ==== pilot stdout END ====
[2025-04-19 01:39:02] 2025-04-19 05:39:00,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 01:39:02] 2025-04-19 05:39:00,296 [wrapper] pilotpid: 347288
[2025-04-19 01:39:02] 2025-04-19 05:39:00,347 [wrapper] Pilot exit status: 0
[2025-04-19 01:39:02] 2025-04-19 05:39:00,562 [wrapper] pandaids: 6606782999
[2025-04-19 01:39:02] 2025-04-19 05:39:01,024 [wrapper] cleanup supervisor_pilot  126263 347289
[2025-04-19 01:39:02] 2025-04-19 05:39:01,066 [wrapper] Test setup, not cleaning
[2025-04-19 01:39:02] 2025-04-19 05:39:01,083 [wrapper] apfmon messages muted
[2025-04-19 01:39:02] 2025-04-19 05:39:01,130 [wrapper] ==== wrapper stdout END ====
[2025-04-19 01:39:02] 2025-04-19 05:39:01,205 [wrapper] ==== wrapper stderr END ====
[2025-04-19 01:39:02]  *** Error codes and diagnostics ***
[2025-04-19 01:39:02]     "exeErrorCode": 0,
[2025-04-19 01:39:02]     "exeErrorDiag": "",
[2025-04-19 01:39:02]     "pilotErrorCode": 0,
[2025-04-19 01:39:02]     "pilotErrorDiag": "",
[2025-04-19 01:39:02]  *** Listing of results directory ***
[2025-04-19 01:39:02] total 414860
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas    495897 Apr 18 14:42 pilot3.tar.gz
[2025-04-19 01:39:02] -rwx------. 1 boincer umatlas     37140 Apr 18 14:46 runpilot2-wrapper.sh
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas      5111 Apr 18 14:46 queuedata.json
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas       100 Apr 18 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 01:39:02] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 18 18:39 run_atlas
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas       105 Apr 18 18:39 job.xml
[2025-04-19 01:39:02] -rw-r--r--. 2 boincer umatlas 223635799 Apr 18 18:39 EVNT.44075481._002832.pool.root.1
[2025-04-19 01:39:02] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 18:39 start_atlas.sh
[2025-04-19 01:39:02] drwxrwx--x. 2 boincer umatlas      4096 Apr 18 18:39 shared
[2025-04-19 01:39:02] -rw-r--r--. 2 boincer umatlas    508885 Apr 18 18:39 input.tar.gz
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas         0 Apr 18 18:39 boinc_lockfile
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas      2579 Apr 18 18:39 pandaJob.out
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas       467 Apr 18 18:39 setup.sh.local
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas    991300 Apr 18 18:40 agis_schedconf.cvmfs.json
[2025-04-19 01:39:02] drwx------. 4 boincer umatlas      4096 Apr 18 18:40 pilot3
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas      6855 Apr 19 01:29 init_data.xml
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas 193088375 Apr 19 01:32 HITS.44075483._072920.pool.root.1
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas       531 Apr 19 01:32 boinc_task_state.xml
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas      1042 Apr 19 01:37 memory_monitor_summary.json
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas   1618536 Apr 19 01:37 agis_ddmendpoints.agis.ALL.json
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas    459942 Apr 19 01:37 log.44075483._072920.job.log.tgz.1
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas        95 Apr 19 01:38 pilot_heartbeat.json
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 01:38 boinc_mmap_file
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas        28 Apr 19 01:38 wrapper_checkpoint.txt
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas      7717 Apr 19 01:38 heartbeat.json
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas      4662 Apr 19 01:38 pilotlog.txt
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas   1653030 Apr 19 01:39 log.44075483._072920.job.log.1
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas       357 Apr 19 01:39 output.list
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas       620 Apr 19 01:39 runtime_log
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas   2129920 Apr 19 01:39 result.tar.gz
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas     11409 Apr 19 01:39 runtime_log.err
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas       657 Apr 19 01:39 fAJKDmAu5P7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmRwfLDmPJgvdn.diag
[2025-04-19 01:39:02] -rw-r--r--. 1 boincer umatlas     20944 Apr 19 01:39 stderr.txt
[2025-04-19 01:39:02] HITS file was successfully produced:
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas 193088375 Apr 19 01:32 shared/HITS.pool.root.1
[2025-04-19 01:39:02]  *** Contents of shared directory: ***
[2025-04-19 01:39:02] total 409568
[2025-04-19 01:39:02] -rw-r--r--. 2 boincer umatlas 223635799 Apr 18 18:39 ATLAS.root_0
[2025-04-19 01:39:02] -rw-r--r--. 2 boincer umatlas     17569 Apr 18 18:39 start_atlas.sh
[2025-04-19 01:39:02] -rw-r--r--. 2 boincer umatlas    508885 Apr 18 18:39 input.tar.gz
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas 193088375 Apr 19 01:32 HITS.pool.root.1
[2025-04-19 01:39:02] -rw-------. 1 boincer umatlas   2129920 Apr 19 01:39 result.tar.gz
01:39:04 (326323): run_atlas exited; CPU time 46121.375434
01:39:04 (326323): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN